Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31854.t1 | XP_013466432.1 | 98.8 | 592 | 7 | 0 | 1 | 592 | 1 | 592 | 0.00E+00 | 1152.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31854.t1 | Q9SDQ3 | 59.7 | 598 | 215 | 11 | 1 | 592 | 16 | 593 | 2.5e-181 | 636.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31854.t1 | A0A072VGC8 | 98.8 | 592 | 7 | 0 | 1 | 592 | 1 | 592 | 0.0e+00 | 1152.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene31854.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene31854 | -0.848679 | 5.26E-60 | -1.69E-46 |
| MS.gene049491 | MS.gene31854 | -0.8204 | 7.00E-53 | -1.69E-46 |
| MS.gene049614 | MS.gene31854 | -0.813837 | 2.09E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene31854 | -0.810635 | 1.04E-50 | -1.69E-46 |
| MS.gene049662 | MS.gene31854 | -0.800995 | 1.11E-48 | -1.69E-46 |
| MS.gene050099 | MS.gene31854 | -0.80458 | 2.02E-49 | -1.69E-46 |
| MS.gene050128 | MS.gene31854 | -0.805745 | 1.15E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene31854 | -0.8204 | 7.00E-53 | -1.69E-46 |
| MS.gene050397 | MS.gene31854 | -0.813649 | 2.30E-51 | -1.69E-46 |
| MS.gene050581 | MS.gene31854 | -0.805585 | 1.24E-49 | -1.69E-46 |
| MS.gene050767 | MS.gene31854 | -0.825672 | 4.13E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene31854 | -0.826031 | 3.39E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene31854 | -0.830513 | 2.82E-55 | -1.69E-46 |
| MS.gene051255 | MS.gene31854 | -0.81857 | 1.83E-52 | -1.69E-46 |
| MS.gene051692 | MS.gene31854 | -0.81406 | 1.87E-51 | -1.69E-46 |
| MS.gene051877 | MS.gene31854 | -0.817186 | 3.76E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene31854 | -0.825818 | 3.81E-54 | -1.69E-46 |
| MS.gene052178 | MS.gene31854 | -0.823904 | 1.08E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene31854 | -0.80916 | 2.17E-50 | -1.69E-46 |
| MS.gene052287 | MS.gene31854 | -0.847736 | 9.58E-60 | -1.69E-46 |
| MS.gene052310 | MS.gene31854 | -0.815484 | 9.03E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene31854 | -0.814148 | 1.79E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene31854 | -0.820621 | 6.23E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene31854 | -0.826026 | 3.40E-54 | -1.69E-46 |
| MS.gene053322 | MS.gene31854 | -0.81407 | 1.86E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene31854 | -0.842533 | 2.44E-58 | -1.69E-46 |
| MS.gene054010 | MS.gene31854 | -0.828079 | 1.10E-54 | -1.69E-46 |
| MS.gene054011 | MS.gene31854 | -0.814582 | 1.43E-51 | -1.69E-46 |
| MS.gene054012 | MS.gene31854 | -0.821738 | 3.44E-53 | -1.69E-46 |
| MS.gene054013 | MS.gene31854 | -0.824197 | 9.20E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene31854 | -0.818568 | 1.83E-52 | -1.69E-46 |
| MS.gene054802 | MS.gene31854 | -0.817418 | 3.33E-52 | -1.69E-46 |
| MS.gene054803 | MS.gene31854 | -0.816259 | 6.06E-52 | -1.69E-46 |
| MS.gene054804 | MS.gene31854 | -0.816756 | 4.69E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene31854 | -0.859845 | 3.12E-63 | -1.69E-46 |
| MS.gene055390 | MS.gene31854 | -0.828153 | 1.05E-54 | -1.69E-46 |
| MS.gene055422 | MS.gene31854 | -0.83065 | 2.61E-55 | -1.69E-46 |
| MS.gene055428 | MS.gene31854 | -0.811224 | 7.79E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene31854 | -0.802252 | 6.13E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene31854 | -0.802047 | 6.75E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene31854 | -0.874213 | 8.05E-68 | -1.69E-46 |
| MS.gene056410 | MS.gene31854 | -0.851072 | 1.13E-60 | -1.69E-46 |
| MS.gene056611 | MS.gene31854 | -0.811802 | 5.83E-51 | -1.69E-46 |
| MS.gene056931 | MS.gene31854 | -0.854946 | 8.77E-62 | -1.69E-46 |
| MS.gene056933 | MS.gene31854 | -0.852009 | 6.11E-61 | -1.69E-46 |
| MS.gene056935 | MS.gene31854 | -0.845141 | 4.89E-59 | -1.69E-46 |
| MS.gene056942 | MS.gene31854 | -0.800126 | 1.67E-48 | -1.69E-46 |
| MS.gene057285 | MS.gene31854 | -0.804233 | 2.38E-49 | -1.69E-46 |
| MS.gene057295 | MS.gene31854 | -0.815044 | 1.13E-51 | -1.69E-46 |
| MS.gene05733 | MS.gene31854 | -0.828295 | 9.73E-55 | -1.69E-46 |
| MS.gene057796 | MS.gene31854 | -0.809886 | 1.52E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene31854 | -0.803886 | 2.81E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene31854 | -0.844976 | 5.42E-59 | -1.69E-46 |
| MS.gene058293 | MS.gene31854 | -0.824423 | 8.14E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene31854 | -0.8487 | 5.19E-60 | -1.69E-46 |
| MS.gene058903 | MS.gene31854 | -0.812129 | 4.95E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene31854 | -0.805511 | 1.29E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene31854 | -0.829473 | 5.05E-55 | -1.69E-46 |
| MS.gene059294 | MS.gene31854 | -0.847315 | 1.25E-59 | -1.69E-46 |
| MS.gene059518 | MS.gene31854 | -0.821468 | 3.97E-53 | -1.69E-46 |
| MS.gene059597 | MS.gene31854 | -0.80337 | 3.60E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene31854 | -0.823929 | 1.06E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene31854 | -0.816727 | 4.76E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene31854 | -0.828744 | 7.58E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene31854 | -0.823735 | 1.18E-53 | -1.69E-46 |
| MS.gene059711 | MS.gene31854 | -0.814613 | 1.41E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene31854 | -0.81046 | 1.14E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene31854 | -0.805733 | 1.16E-49 | -1.69E-46 |
| MS.gene059974 | MS.gene31854 | -0.878139 | 3.57E-69 | -1.69E-46 |
| MS.gene060005 | MS.gene31854 | -0.851578 | 8.10E-61 | -1.69E-46 |
| MS.gene06037 | MS.gene31854 | -0.833148 | 6.30E-56 | -1.69E-46 |
| MS.gene060559 | MS.gene31854 | -0.844964 | 5.46E-59 | -1.69E-46 |
| MS.gene060799 | MS.gene31854 | -0.813712 | 2.23E-51 | -1.69E-46 |
| MS.gene060800 | MS.gene31854 | -0.837114 | 6.29E-57 | -1.69E-46 |
| MS.gene060801 | MS.gene31854 | -0.818297 | 2.11E-52 | -1.69E-46 |
| MS.gene060818 | MS.gene31854 | -0.80387 | 2.84E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene31854 | -0.806385 | 8.44E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene31854 | -0.816649 | 4.96E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene31854 | -0.821512 | 3.88E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31854.t1 | MTR_1g029420 | 98.818 | 592 | 7 | 0 | 1 | 592 | 1 | 592 | 0.0 | 1216 |
| MS.gene31854.t1 | MTR_3g089055 | 70.451 | 599 | 136 | 7 | 1 | 592 | 6 | 570 | 0.0 | 816 |
| MS.gene31854.t1 | MTR_3g089055 | 70.451 | 599 | 136 | 7 | 1 | 592 | 1 | 565 | 0.0 | 815 |
| MS.gene31854.t1 | MTR_5g097480 | 55.946 | 370 | 163 | 0 | 223 | 592 | 175 | 544 | 1.03e-159 | 468 |
| MS.gene31854.t1 | MTR_2g082090 | 43.364 | 535 | 290 | 3 | 70 | 591 | 44 | 578 | 1.27e-149 | 443 |
| MS.gene31854.t1 | MTR_3g056110 | 50.270 | 370 | 184 | 0 | 223 | 592 | 173 | 542 | 5.89e-142 | 422 |
| MS.gene31854.t1 | MTR_5g094450 | 44.632 | 475 | 229 | 7 | 123 | 592 | 87 | 532 | 4.94e-137 | 409 |
| MS.gene31854.t1 | MTR_4g133660 | 42.702 | 459 | 229 | 6 | 137 | 591 | 114 | 542 | 6.55e-131 | 394 |
| MS.gene31854.t1 | MTR_2g026250 | 46.631 | 371 | 197 | 1 | 223 | 592 | 226 | 596 | 2.15e-125 | 382 |
| MS.gene31854.t1 | MTR_7g057230 | 38.193 | 487 | 259 | 12 | 123 | 591 | 194 | 656 | 5.50e-82 | 270 |
| MS.gene31854.t1 | MTR_7g027190 | 39.175 | 388 | 204 | 6 | 224 | 592 | 299 | 673 | 1.49e-80 | 267 |
| MS.gene31854.t1 | MTR_6g047750 | 39.130 | 391 | 196 | 10 | 223 | 592 | 293 | 662 | 1.02e-74 | 251 |
| MS.gene31854.t1 | MTR_3g065980 | 36.292 | 383 | 213 | 8 | 226 | 592 | 173 | 540 | 8.30e-69 | 233 |
| MS.gene31854.t1 | MTR_7g074650 | 38.251 | 366 | 211 | 6 | 228 | 592 | 441 | 792 | 3.80e-66 | 231 |
| MS.gene31854.t1 | MTR_4g064160 | 32.703 | 370 | 248 | 1 | 223 | 591 | 314 | 683 | 8.96e-64 | 222 |
| MS.gene31854.t1 | MTR_7g062120 | 29.904 | 418 | 279 | 3 | 189 | 592 | 323 | 740 | 3.59e-62 | 219 |
| MS.gene31854.t1 | MTR_8g442410 | 34.127 | 378 | 230 | 7 | 226 | 592 | 156 | 525 | 3.83e-62 | 214 |
| MS.gene31854.t1 | MTR_4g104020 | 32.199 | 382 | 237 | 5 | 224 | 592 | 148 | 520 | 1.80e-60 | 209 |
| MS.gene31854.t1 | MTR_4g064200 | 33.062 | 369 | 242 | 4 | 225 | 591 | 284 | 649 | 3.92e-60 | 211 |
| MS.gene31854.t1 | MTR_4g097080 | 30.952 | 378 | 248 | 6 | 223 | 592 | 131 | 503 | 1.28e-58 | 204 |
| MS.gene31854.t1 | MTR_3g022830 | 29.257 | 417 | 239 | 4 | 226 | 592 | 26 | 436 | 1.39e-57 | 199 |
| MS.gene31854.t1 | MTR_4g064180 | 30.357 | 392 | 268 | 3 | 203 | 589 | 232 | 623 | 2.68e-56 | 201 |
| MS.gene31854.t1 | MTR_4g064120 | 29.337 | 392 | 272 | 3 | 203 | 589 | 232 | 623 | 1.76e-55 | 198 |
| MS.gene31854.t1 | MTR_4g064150 | 28.934 | 394 | 275 | 3 | 203 | 591 | 339 | 732 | 2.46e-55 | 200 |
| MS.gene31854.t1 | MTR_2g097390 | 30.108 | 372 | 253 | 3 | 223 | 591 | 273 | 640 | 3.11e-54 | 195 |
| MS.gene31854.t1 | MTR_2g097310 | 30.108 | 372 | 253 | 3 | 223 | 591 | 270 | 637 | 3.98e-54 | 195 |
| MS.gene31854.t1 | MTR_2g097410 | 29.412 | 374 | 257 | 4 | 223 | 591 | 369 | 740 | 4.34e-54 | 196 |
| MS.gene31854.t1 | MTR_5g009080 | 28.837 | 430 | 239 | 7 | 224 | 592 | 55 | 478 | 5.48e-54 | 191 |
| MS.gene31854.t1 | MTR_2g097350 | 31.016 | 374 | 247 | 5 | 223 | 591 | 272 | 639 | 6.06e-54 | 194 |
| MS.gene31854.t1 | MTR_4g076020 | 35.040 | 371 | 207 | 11 | 228 | 592 | 87 | 429 | 1.08e-53 | 189 |
| MS.gene31854.t1 | MTR_4g102790 | 34.293 | 382 | 224 | 13 | 225 | 591 | 292 | 661 | 3.37e-53 | 193 |
| MS.gene31854.t1 | MTR_5g015490 | 30.749 | 387 | 249 | 9 | 220 | 592 | 109 | 490 | 1.12e-52 | 187 |
| MS.gene31854.t1 | MTR_2g097467 | 28.117 | 409 | 281 | 4 | 187 | 591 | 254 | 653 | 1.49e-52 | 191 |
| MS.gene31854.t1 | MTR_2g097473 | 28.676 | 408 | 281 | 7 | 187 | 591 | 253 | 653 | 2.25e-51 | 187 |
| MS.gene31854.t1 | MTR_2g097463 | 28.533 | 368 | 259 | 2 | 225 | 591 | 290 | 654 | 5.09e-50 | 184 |
| MS.gene31854.t1 | MTR_4g077760 | 31.183 | 372 | 241 | 7 | 226 | 592 | 194 | 555 | 4.71e-49 | 179 |
| MS.gene31854.t1 | MTR_3g072710 | 32.316 | 393 | 229 | 11 | 224 | 591 | 119 | 499 | 8.40e-47 | 172 |
| MS.gene31854.t1 | MTR_1g069725 | 32.275 | 378 | 221 | 12 | 225 | 591 | 109 | 462 | 9.44e-47 | 171 |
| MS.gene31854.t1 | MTR_2g089100 | 29.545 | 396 | 249 | 7 | 223 | 591 | 50 | 442 | 9.50e-47 | 171 |
| MS.gene31854.t1 | MTR_2g099110 | 28.571 | 455 | 282 | 11 | 171 | 592 | 7 | 451 | 2.17e-46 | 169 |
| MS.gene31854.t1 | MTR_1g096030 | 29.975 | 397 | 234 | 12 | 224 | 592 | 79 | 459 | 3.06e-45 | 167 |
| MS.gene31854.t1 | MTR_5g015950 | 26.506 | 415 | 257 | 7 | 223 | 591 | 33 | 445 | 2.47e-41 | 155 |
| MS.gene31854.t1 | MTR_3g053270 | 26.506 | 415 | 257 | 7 | 223 | 591 | 33 | 445 | 2.47e-41 | 155 |
| MS.gene31854.t1 | MTR_2g097380 | 29.934 | 304 | 194 | 3 | 241 | 543 | 240 | 525 | 5.05e-41 | 157 |
| MS.gene31854.t1 | MTR_5g058860 | 31.630 | 411 | 257 | 15 | 198 | 591 | 93 | 496 | 2.23e-40 | 154 |
| MS.gene31854.t1 | MTR_4g095500 | 26.699 | 412 | 258 | 7 | 223 | 591 | 57 | 467 | 7.89e-37 | 143 |
| MS.gene31854.t1 | MTR_2g034250 | 24.737 | 380 | 268 | 7 | 226 | 592 | 211 | 585 | 3.00e-31 | 129 |
| MS.gene31854.t1 | MTR_4g076140 | 32.444 | 225 | 145 | 2 | 224 | 447 | 47 | 265 | 3.39e-30 | 124 |
| MS.gene31854.t1 | MTR_4g076140 | 39.333 | 150 | 90 | 1 | 444 | 592 | 320 | 469 | 1.00e-29 | 122 |
| MS.gene31854.t1 | MTR_2g034280 | 24.934 | 381 | 263 | 8 | 226 | 592 | 204 | 575 | 1.98e-27 | 117 |
| MS.gene31854.t1 | MTR_2g034260 | 24.808 | 391 | 253 | 11 | 226 | 592 | 211 | 584 | 2.26e-27 | 117 |
| MS.gene31854.t1 | MTR_0092s0100 | 27.660 | 376 | 243 | 12 | 226 | 592 | 373 | 728 | 3.36e-25 | 110 |
| MS.gene31854.t1 | MTR_0092s0100 | 27.660 | 376 | 243 | 12 | 226 | 592 | 376 | 731 | 3.41e-25 | 110 |
| MS.gene31854.t1 | MTR_4g026485 | 26.396 | 394 | 266 | 12 | 205 | 592 | 249 | 624 | 1.51e-24 | 108 |
| MS.gene31854.t1 | MTR_8g093070 | 28.125 | 384 | 232 | 15 | 225 | 591 | 139 | 495 | 1.79e-24 | 107 |
| MS.gene31854.t1 | MTR_8g020840 | 24.938 | 401 | 255 | 16 | 220 | 592 | 166 | 548 | 1.56e-23 | 105 |
| MS.gene31854.t1 | MTR_7g109580 | 24.211 | 380 | 264 | 11 | 224 | 592 | 188 | 554 | 1.55e-21 | 99.0 |
| MS.gene31854.t1 | MTR_3g022580 | 32.716 | 162 | 103 | 2 | 431 | 592 | 28 | 183 | 2.69e-19 | 86.3 |
| MS.gene31854.t1 | MTR_1g086970 | 26.736 | 288 | 185 | 11 | 315 | 592 | 207 | 478 | 3.09e-18 | 88.2 |
| MS.gene31854.t1 | MTR_3g022005 | 39.785 | 93 | 56 | 0 | 500 | 592 | 33 | 125 | 3.57e-14 | 70.1 |
| MS.gene31854.t1 | MTR_4g074310 | 31.156 | 199 | 95 | 5 | 265 | 458 | 35 | 196 | 5.99e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31854.t1 | AT1G21450 | 61.857 | 603 | 194 | 14 | 1 | 592 | 16 | 593 | 0.0 | 694 |
| MS.gene31854.t1 | AT5G48150 | 51.885 | 451 | 203 | 6 | 147 | 592 | 49 | 490 | 8.64e-159 | 464 |
| MS.gene31854.t1 | AT5G48150 | 51.885 | 451 | 203 | 6 | 147 | 592 | 49 | 490 | 8.64e-159 | 464 |
| MS.gene31854.t1 | AT5G48150 | 51.885 | 451 | 203 | 6 | 147 | 592 | 49 | 490 | 8.64e-159 | 464 |
| MS.gene31854.t1 | AT5G48150 | 51.885 | 451 | 203 | 6 | 147 | 592 | 49 | 490 | 8.64e-159 | 464 |
| MS.gene31854.t1 | AT1G50600 | 53.784 | 370 | 171 | 0 | 223 | 592 | 157 | 526 | 9.71e-146 | 432 |
| MS.gene31854.t1 | AT1G50600 | 53.784 | 370 | 171 | 0 | 223 | 592 | 232 | 601 | 7.59e-145 | 432 |
| MS.gene31854.t1 | AT1G50600 | 53.784 | 370 | 171 | 0 | 223 | 592 | 228 | 597 | 7.72e-145 | 432 |
| MS.gene31854.t1 | AT2G04890 | 53.514 | 370 | 165 | 1 | 223 | 592 | 51 | 413 | 5.12e-142 | 418 |
| MS.gene31854.t1 | AT4G17230 | 50.541 | 370 | 183 | 0 | 223 | 592 | 156 | 525 | 1.45e-132 | 398 |
| MS.gene31854.t1 | AT4G17230 | 50.541 | 370 | 183 | 0 | 223 | 592 | 156 | 525 | 1.45e-132 | 398 |
| MS.gene31854.t1 | AT5G52510 | 38.961 | 385 | 210 | 8 | 223 | 592 | 266 | 640 | 3.46e-79 | 263 |
| MS.gene31854.t1 | AT3G03450 | 38.032 | 376 | 210 | 9 | 226 | 592 | 184 | 545 | 1.45e-71 | 240 |
| MS.gene31854.t1 | AT1G66350 | 37.028 | 397 | 223 | 10 | 202 | 592 | 131 | 506 | 3.36e-69 | 233 |
| MS.gene31854.t1 | AT3G54220 | 38.211 | 369 | 208 | 8 | 228 | 591 | 296 | 649 | 2.64e-67 | 231 |
| MS.gene31854.t1 | AT1G07530 | 35.040 | 371 | 239 | 2 | 223 | 591 | 394 | 764 | 2.93e-67 | 233 |
| MS.gene31854.t1 | AT5G17490 | 38.133 | 375 | 209 | 10 | 224 | 592 | 159 | 516 | 1.93e-66 | 226 |
| MS.gene31854.t1 | AT5G59450 | 30.982 | 397 | 258 | 5 | 203 | 592 | 211 | 598 | 2.35e-62 | 217 |
| MS.gene31854.t1 | AT1G14920 | 35.389 | 373 | 219 | 9 | 226 | 592 | 173 | 529 | 4.13e-62 | 214 |
| MS.gene31854.t1 | AT2G29060 | 29.581 | 453 | 300 | 6 | 148 | 591 | 212 | 654 | 2.47e-59 | 209 |
| MS.gene31854.t1 | AT2G01570 | 35.092 | 379 | 212 | 11 | 226 | 592 | 225 | 581 | 5.26e-59 | 207 |
| MS.gene31854.t1 | AT2G29060 | 29.581 | 453 | 300 | 6 | 148 | 591 | 249 | 691 | 5.29e-59 | 209 |
| MS.gene31854.t1 | AT5G66770 | 35.121 | 373 | 227 | 8 | 226 | 592 | 221 | 584 | 7.87e-59 | 207 |
| MS.gene31854.t1 | AT3G46600 | 30.458 | 371 | 256 | 2 | 223 | 592 | 2 | 371 | 4.55e-56 | 194 |
| MS.gene31854.t1 | AT2G37650 | 29.919 | 371 | 257 | 2 | 223 | 592 | 333 | 701 | 7.20e-56 | 201 |
| MS.gene31854.t1 | AT5G41920 | 32.235 | 425 | 251 | 11 | 175 | 592 | 6 | 400 | 7.94e-56 | 194 |
| MS.gene31854.t1 | AT2G37650 | 29.919 | 371 | 257 | 2 | 223 | 592 | 345 | 713 | 9.28e-56 | 201 |
| MS.gene31854.t1 | AT3G46600 | 29.974 | 387 | 269 | 2 | 207 | 592 | 194 | 579 | 3.05e-55 | 197 |
| MS.gene31854.t1 | AT3G46600 | 29.974 | 387 | 269 | 2 | 207 | 592 | 162 | 547 | 5.38e-55 | 196 |
| MS.gene31854.t1 | AT2G29065 | 30.952 | 378 | 252 | 6 | 223 | 591 | 250 | 627 | 3.92e-54 | 195 |
| MS.gene31854.t1 | AT4G37650 | 29.138 | 429 | 260 | 12 | 191 | 592 | 118 | 529 | 1.29e-52 | 189 |
| MS.gene31854.t1 | AT1G07520 | 29.894 | 378 | 255 | 7 | 223 | 591 | 152 | 528 | 1.04e-51 | 186 |
| MS.gene31854.t1 | AT1G07520 | 29.894 | 378 | 255 | 7 | 223 | 591 | 152 | 528 | 1.04e-51 | 186 |
| MS.gene31854.t1 | AT1G07520 | 29.894 | 378 | 255 | 7 | 223 | 591 | 317 | 693 | 2.39e-51 | 188 |
| MS.gene31854.t1 | AT1G07520 | 29.894 | 378 | 255 | 7 | 223 | 591 | 316 | 692 | 2.71e-51 | 188 |
| MS.gene31854.t1 | AT3G50650 | 29.325 | 474 | 282 | 11 | 157 | 592 | 84 | 542 | 2.01e-49 | 180 |
| MS.gene31854.t1 | AT1G63100 | 32.565 | 347 | 214 | 7 | 225 | 563 | 252 | 586 | 1.59e-43 | 165 |
| MS.gene31854.t1 | AT1G63100 | 32.565 | 347 | 214 | 7 | 225 | 563 | 277 | 611 | 2.14e-43 | 165 |
| MS.gene31854.t1 | AT1G55580 | 27.845 | 413 | 246 | 9 | 223 | 592 | 42 | 445 | 1.36e-41 | 156 |
| MS.gene31854.t1 | AT4G08250 | 28.947 | 380 | 249 | 9 | 224 | 591 | 106 | 476 | 5.16e-40 | 152 |
| MS.gene31854.t1 | AT3G49950 | 26.410 | 390 | 256 | 11 | 223 | 591 | 28 | 407 | 5.60e-36 | 140 |
| MS.gene31854.t1 | AT1G50420 | 35.714 | 210 | 126 | 2 | 224 | 430 | 56 | 259 | 1.34e-33 | 134 |
| MS.gene31854.t1 | AT1G50420 | 38.411 | 151 | 90 | 2 | 444 | 592 | 330 | 479 | 6.05e-27 | 114 |
| MS.gene31854.t1 | AT3G13840 | 26.425 | 386 | 253 | 11 | 220 | 592 | 143 | 510 | 6.86e-25 | 108 |
| MS.gene31854.t1 | AT3G60630 | 25.000 | 348 | 232 | 10 | 258 | 592 | 291 | 622 | 4.55e-20 | 94.7 |
| MS.gene31854.t1 | AT2G45160 | 26.774 | 310 | 199 | 9 | 295 | 592 | 346 | 639 | 4.69e-20 | 94.7 |
| MS.gene31854.t1 | AT5G67411 | 33.668 | 199 | 119 | 7 | 342 | 529 | 2 | 198 | 6.62e-18 | 82.8 |
| MS.gene31854.t1 | AT4G00150 | 23.989 | 371 | 246 | 13 | 230 | 592 | 212 | 554 | 9.03e-17 | 84.0 |
Find 155 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAAATCTGATTCAAAAT+TGG | 0.173475 | 1.4:+14483213 | None:intergenic |
| CAGGCAGTTGGTTTCAATTC+AGG | 0.191357 | 1.4:-14482825 | MS.gene31854:CDS |
| TCCACAACTGTTACAAGTTT+TGG | 0.228798 | 1.4:+14482206 | None:intergenic |
| TAGAAGCAAGTGTTTGTATC+AGG | 0.258688 | 1.4:+14482534 | None:intergenic |
| CTGATAGAACCGTCTAGTTC+TGG | 0.260300 | 1.4:-14483370 | MS.gene31854:CDS |
| TGCCAAGCTATACTCGTTAA+AGG | 0.281634 | 1.4:-14483521 | MS.gene31854:CDS |
| TGATACAAACACTTGCTTCT+AGG | 0.282847 | 1.4:-14482532 | MS.gene31854:CDS |
| AACAGATCGTTGCACGGATT+CGG | 0.283044 | 1.4:+14482466 | None:intergenic |
| GGAAGGACTTGCGGCTCGTT+TGG | 0.307317 | 1.4:-14482768 | MS.gene31854:CDS |
| ACAGATCGTTGCACGGATTC+GGG | 0.312714 | 1.4:+14482467 | None:intergenic |
| GCGATTGAAAATACAAGAAT+TGG | 0.316595 | 1.4:-14483149 | MS.gene31854:CDS |
| GCGGCTCGTTTGGCTTCATC+GGG | 0.324337 | 1.4:-14482758 | MS.gene31854:CDS |
| AGCTAATTCAGGAGGTTCTA+TGG | 0.328878 | 1.4:-14483296 | MS.gene31854:CDS |
| TGATATTTCTTTGGTGCTAC+TGG | 0.337052 | 1.4:+14482946 | None:intergenic |
| GGTATGAAGTTGCCGGAAAA+TGG | 0.337471 | 1.4:-14481989 | MS.gene31854:CDS |
| TCTTTGACATTTGTGCTCAT+TGG | 0.345552 | 1.4:+14481930 | None:intergenic |
| CACAGCAGAGTAGTAATTAT+AGG | 0.347958 | 1.4:+14482133 | None:intergenic |
| GTACAAGATAATAGAGGAAA+TGG | 0.348833 | 1.4:-14481871 | MS.gene31854:CDS |
| TGCGGCTCGTTTGGCTTCAT+CGG | 0.352118 | 1.4:-14482759 | MS.gene31854:CDS |
| TTATAGGCTTCAACAAATCT+TGG | 0.356310 | 1.4:+14482149 | None:intergenic |
| CCGTCTAGTTCTGGGATATC+AGG | 0.356405 | 1.4:-14483361 | MS.gene31854:CDS |
| TTTGGATTTATTGCTGCTAA+TGG | 0.383067 | 1.4:-14482638 | MS.gene31854:CDS |
| TACATGCTTCTATGCTTATC+AGG | 0.384672 | 1.4:+14483457 | None:intergenic |
| CCTGATTGCTTTGAATTTGA+CGG | 0.401860 | 1.4:-14483178 | MS.gene31854:CDS |
| CCGTCAAATTCAAAGCAATC+AGG | 0.405445 | 1.4:+14483178 | None:intergenic |
| ATGGAGGGCAAGGATGAAAA+TGG | 0.406129 | 1.4:-14481970 | MS.gene31854:CDS |
| CACTCTTCCGAGAGAGAGCC+AGG | 0.410423 | 1.4:-14482093 | MS.gene31854:CDS |
| TTCAATTCAGGGAGAACCTT+CGG | 0.411593 | 1.4:-14482813 | MS.gene31854:CDS |
| CAAATGTCAAAGAAGCAATC+AGG | 0.416319 | 1.4:-14481920 | MS.gene31854:CDS |
| ACGATGAGGAAAACATGTTT+AGG | 0.418481 | 1.4:-14483087 | MS.gene31854:CDS |
| ACGAAACATAAGTTTCAAAC+TGG | 0.420279 | 1.4:+14483263 | None:intergenic |
| CTCACATAAGGTGGCTTCCC+TGG | 0.421499 | 1.4:+14482509 | None:intergenic |
| GGACGACAGTTGAGCATTGA+TGG | 0.424496 | 1.4:+14482341 | None:intergenic |
| AGGCAGTTGGTTTCAATTCA+GGG | 0.425383 | 1.4:-14482824 | MS.gene31854:CDS |
| ATAGAACGGTATGAAGTTGC+CGG | 0.427124 | 1.4:-14481996 | MS.gene31854:CDS |
| ATTCATAGAGTAATTGCTTC+GGG | 0.428091 | 1.4:+14482906 | None:intergenic |
| TACCAGCTCAGAGCTAATTC+AGG | 0.431218 | 1.4:-14483307 | MS.gene31854:CDS |
| TACAAGATAATAGAGGAAAT+GGG | 0.441200 | 1.4:-14481870 | MS.gene31854:CDS |
| TCAACAAATCTTGGGAGAAA+GGG | 0.445090 | 1.4:+14482158 | None:intergenic |
| GTTCACCACAAGAGCTTCCC+CGG | 0.452377 | 1.4:+14482319 | None:intergenic |
| TACCGTTGATACACTTTCAT+CGG | 0.452419 | 1.4:+14482271 | None:intergenic |
| ACCGTTGATACACTTTCATC+GGG | 0.454201 | 1.4:+14482272 | None:intergenic |
| GGGTTATATATTGACTTCCT+TGG | 0.454975 | 1.4:+14482555 | None:intergenic |
| TATAGGCTTCAACAAATCTT+GGG | 0.456724 | 1.4:+14482150 | None:intergenic |
| TTCAACAAATCTTGGGAGAA+AGG | 0.466115 | 1.4:+14482157 | None:intergenic |
| TATGTCATTGATTATATCTC+CGG | 0.466200 | 1.4:-14483569 | MS.gene31854:CDS |
| TTTCAACATTCAACCTATCC+TGG | 0.466892 | 1.4:+14482075 | None:intergenic |
| TGATAGAACCGTCTAGTTCT+GGG | 0.467216 | 1.4:-14483369 | MS.gene31854:CDS |
| TCTGAGGAAAGAGATTCCTT+TGG | 0.471057 | 1.4:+14482986 | None:intergenic |
| GAGTTGGCTGATGCGTCGTA+TGG | 0.473339 | 1.4:-14483547 | MS.gene31854:CDS |
| TCAATGCTCAACTGTCGTCC+CGG | 0.473427 | 1.4:-14482338 | MS.gene31854:CDS |
| CAATGCTCAACTGTCGTCCC+GGG | 0.477152 | 1.4:-14482337 | MS.gene31854:CDS |
| CATTCATAGAGTAATTGCTT+CGG | 0.479741 | 1.4:+14482905 | None:intergenic |
| GCTTATCAGGAGCAAAATCA+TGG | 0.483645 | 1.4:+14483470 | None:intergenic |
| TCTTAACCATGCGGAGAAGC+TGG | 0.488691 | 1.4:+14482237 | None:intergenic |
| GTTGGAGGCCTAAGTATCAT+AGG | 0.491231 | 1.4:-14482446 | MS.gene31854:CDS |
| CAGCTATGATCGATGATCTC+AGG | 0.491997 | 1.4:-14482844 | MS.gene31854:CDS |
| GCCAAGCTATACTCGTTAAA+GGG | 0.492765 | 1.4:-14483520 | MS.gene31854:CDS |
| TGAAAATACAAGAATTGGAG+AGG | 0.493157 | 1.4:-14483144 | MS.gene31854:CDS |
| CGACTTGTTCTGAATGGGAT+TGG | 0.494993 | 1.4:+14483021 | None:intergenic |
| TCGTCCCGGGGAAGCTCTTG+TGG | 0.495157 | 1.4:-14482324 | MS.gene31854:CDS |
| GTCTTTGACCTATGATACTT+AGG | 0.498050 | 1.4:+14482438 | None:intergenic |
| TTGGCAGACTCAGCAAAGTC+AGG | 0.500152 | 1.4:+14483040 | None:intergenic |
| AAATCATGGGAGGACAAGCC+AGG | 0.501458 | 1.4:+14483484 | None:intergenic |
| AAGCAATCAGGGAACTCATA+AGG | 0.502002 | 1.4:-14481908 | MS.gene31854:CDS |
| ATTGATTATATCTCCGGAGT+TGG | 0.504145 | 1.4:-14483563 | MS.gene31854:CDS |
| TGTCATTGCGTGTGAGGGCG+AGG | 0.504713 | 1.4:-14482024 | MS.gene31854:CDS |
| CCACCTTATGTGAGATTGAC+CGG | 0.507424 | 1.4:-14482500 | MS.gene31854:CDS |
| CAAACACTTGCTTCTAGGCC+AGG | 0.511442 | 1.4:-14482527 | MS.gene31854:CDS |
| TCCCTTTAACGAGTATAGCT+TGG | 0.513672 | 1.4:+14483519 | None:intergenic |
| TGATGCGACTTGTTCTGAAT+GGG | 0.520418 | 1.4:+14483016 | None:intergenic |
| AACCTATCCTGGCTCTCTCT+CGG | 0.522464 | 1.4:+14482086 | None:intergenic |
| TCCAAAACTTGTAACAGTTG+TGG | 0.523299 | 1.4:-14482207 | MS.gene31854:CDS |
| CATCGGGCATGTGATGAAGC+TGG | 0.525795 | 1.4:+14482288 | None:intergenic |
| GGATAGAATTGCAGCCTACA+TGG | 0.528367 | 1.4:-14482792 | MS.gene31854:CDS |
| ACACCGGTCAATCTCACATA+AGG | 0.532296 | 1.4:+14482497 | None:intergenic |
| AAACTTATGTTTCGTCTACA+AGG | 0.534213 | 1.4:-14483255 | MS.gene31854:CDS |
| TTATAAAGCTTTGAAATGCA+AGG | 0.539721 | 1.4:-14482726 | MS.gene31854:CDS |
| GGCTATTAAAGATGATAAGA+AGG | 0.541700 | 1.4:-14482603 | MS.gene31854:CDS |
| AAATATCACAAAACTTTCCT+CGG | 0.543588 | 1.4:-14482931 | MS.gene31854:CDS |
| GCTACGGCACGAAATTCAAA+TGG | 0.544112 | 1.4:+14482386 | None:intergenic |
| ATGATGCGACTTGTTCTGAA+TGG | 0.544379 | 1.4:+14483015 | None:intergenic |
| GAATCCGTGCAACGATCTGT+TGG | 0.549569 | 1.4:-14482464 | MS.gene31854:CDS |
| AGCAATGCAGATACTATTCG+AGG | 0.550536 | 1.4:-14482678 | MS.gene31854:CDS |
| TGACAAGTACAAGATAATAG+AGG | 0.550853 | 1.4:-14481877 | MS.gene31854:CDS |
| GTTCCTCTGTAGGTGAATCA+AGG | 0.552374 | 1.4:+14483392 | None:intergenic |
| AGGGCAAGGATGAAAATGGC+TGG | 0.554676 | 1.4:-14481966 | MS.gene31854:CDS |
| AGAAGCAAGTGTTTGTATCA+GGG | 0.558440 | 1.4:+14482535 | None:intergenic |
| GAATGTTGAAAGGCAATGCT+TGG | 0.559198 | 1.4:-14482063 | MS.gene31854:CDS |
| AAGGGAGCCGATGTTACACC+TGG | 0.562237 | 1.4:-14483502 | MS.gene31854:CDS |
| CTCCTGAATTAGCTCTGAGC+TGG | 0.562844 | 1.4:+14483305 | None:intergenic |
| ACAAGATAATAGAGGAAATG+GGG | 0.563828 | 1.4:-14481869 | MS.gene31854:CDS |
| GATCGATGATCTCAGGCAGT+TGG | 0.564311 | 1.4:-14482837 | MS.gene31854:CDS |
| AGTTGGCTGATGCGTCGTAT+GGG | 0.565392 | 1.4:-14483546 | MS.gene31854:CDS |
| AATTTCGTGCCGTAGCATCA+AGG | 0.565456 | 1.4:-14482379 | MS.gene31854:CDS |
| ACTTGATTGTTGCTTCAGCA+TGG | 0.566287 | 1.4:-14481818 | MS.gene31854:CDS |
| TTGCCGGAAAATGGAGGGCA+AGG | 0.570168 | 1.4:-14481980 | MS.gene31854:CDS |
| GAATTGGAGAGGGCACTGCT+TGG | 0.573720 | 1.4:-14483133 | MS.gene31854:CDS |
| AATTGAAGACCTTGATGCTA+CGG | 0.573876 | 1.4:+14482370 | None:intergenic |
| GTTTAGGACTGTTCAAAGCA+TGG | 0.574744 | 1.4:-14483071 | MS.gene31854:CDS |
| TCCGTGCAACGATCTGTTGG+AGG | 0.575063 | 1.4:-14482461 | MS.gene31854:CDS |
| CAACAAATCTTGGGAGAAAG+GGG | 0.584291 | 1.4:+14482159 | None:intergenic |
| GAAAAGCTAGCAGAAGTACT+CGG | 0.588604 | 1.4:-14482413 | MS.gene31854:CDS |
| ATGAAGTTGCCGGAAAATGG+AGG | 0.588856 | 1.4:-14481986 | MS.gene31854:CDS |
| AGTAATTGCTTCGGGGTCCG+AGG | 0.588857 | 1.4:+14482914 | None:intergenic |
| CGTCAAATTCAAAGCAATCA+GGG | 0.590617 | 1.4:+14483179 | None:intergenic |
| CTGGCTCTCTCTCGGAAGAG+TGG | 0.590772 | 1.4:+14482094 | None:intergenic |
| GTCAATGTCATTGCGTGTGA+GGG | 0.592691 | 1.4:-14482029 | MS.gene31854:CDS |
| AAATGTCAAAGAAGCAATCA+GGG | 0.593878 | 1.4:-14481919 | MS.gene31854:CDS |
| GGAAATTCTGTTCATGCTGA+TGG | 0.594308 | 1.4:-14483340 | MS.gene31854:CDS |
| GCCTCCAACAGATCGTTGCA+CGG | 0.595803 | 1.4:+14482460 | None:intergenic |
| GCCCGATGAAAGTGTATCAA+CGG | 0.597244 | 1.4:-14482273 | MS.gene31854:CDS |
| TAAATCCAAACTTAAAACAT+GGG | 0.600368 | 1.4:+14482651 | None:intergenic |
| GCTACTAAGATTTGAATCTG+AGG | 0.604516 | 1.4:+14482970 | None:intergenic |
| ATAAATCCAAACTTAAAACA+TGG | 0.605905 | 1.4:+14482650 | None:intergenic |
| ACGAGACCAGCTTCTCCGCA+TGG | 0.606476 | 1.4:-14482243 | MS.gene31854:CDS |
| GGTTCTATCAGTTCCTCTGT+AGG | 0.608223 | 1.4:+14483382 | None:intergenic |
| TTGAAAGGCAATGCTTGGCG+AGG | 0.610581 | 1.4:-14482058 | MS.gene31854:CDS |
| AGGATAGGTTGAATGTTGAA+AGG | 0.611055 | 1.4:-14482073 | MS.gene31854:CDS |
| CCTGATATCCCAGAACTAGA+CGG | 0.611349 | 1.4:+14483361 | None:intergenic |
| TGTGCTAGCGCACTTTCAGA+AGG | 0.613130 | 1.4:-14482884 | MS.gene31854:CDS |
| CTTCCTTGATTCACCTACAG+AGG | 0.616392 | 1.4:-14483395 | MS.gene31854:CDS |
| AAACACTTGCTTCTAGGCCA+GGG | 0.617893 | 1.4:-14482526 | MS.gene31854:CDS |
| TAGGCTGCAATTCTATCCGA+AGG | 0.623160 | 1.4:+14482797 | None:intergenic |
| GTCGCATCATGACTCGCCAA+AGG | 0.623457 | 1.4:-14483002 | MS.gene31854:CDS |
| CCGGTCAATCTCACATAAGG+TGG | 0.626350 | 1.4:+14482500 | None:intergenic |
| ATTGCAGCCTACATGGTGGA+AGG | 0.627921 | 1.4:-14482785 | MS.gene31854:CDS |
| CAAGATAATAGAGGAAATGG+GGG | 0.629220 | 1.4:-14481868 | MS.gene31854:CDS |
| TGAAAGGCAATGCTTGGCGA+GGG | 0.630756 | 1.4:-14482057 | MS.gene31854:CDS |
| TACGACGCATCAGCCAACTC+CGG | 0.632209 | 1.4:+14483550 | None:intergenic |
| GAAAATACAAGAATTGGAGA+GGG | 0.632436 | 1.4:-14483143 | MS.gene31854:CDS |
| TGTCAATGTCATTGCGTGTG+AGG | 0.632541 | 1.4:-14482030 | MS.gene31854:CDS |
| TTCCGAGAGAGAGCCAGGAT+AGG | 0.634206 | 1.4:-14482088 | MS.gene31854:CDS |
| CTTATCAGGAGCAAAATCAT+GGG | 0.634286 | 1.4:+14483471 | None:intergenic |
| TGAAGTTGCCGGAAAATGGA+GGG | 0.635160 | 1.4:-14481985 | MS.gene31854:CDS |
| GCTGCTAGACGATCAGAAGA+CGG | 0.639186 | 1.4:+14482698 | None:intergenic |
| CTACATGGTGGAAGGACTTG+CGG | 0.640770 | 1.4:-14482777 | MS.gene31854:CDS |
| CGCAAGTCCTTCCACCATGT+AGG | 0.643612 | 1.4:+14482778 | None:intergenic |
| GGACAAGCCAGGTGTAACAT+CGG | 0.651711 | 1.4:+14483495 | None:intergenic |
| TTCACCACAAGAGCTTCCCC+GGG | 0.654911 | 1.4:+14482320 | None:intergenic |
| TGCTAATGGTGCTATCTCTG+AGG | 0.658374 | 1.4:-14482624 | MS.gene31854:CDS |
| AACAAATCTTGGGAGAAAGG+GGG | 0.658411 | 1.4:+14482160 | None:intergenic |
| ATCAGGAGCAAAATCATGGG+AGG | 0.665372 | 1.4:+14483474 | None:intergenic |
| CAGCTCAGAGCTAATTCAGG+AGG | 0.666948 | 1.4:-14483304 | MS.gene31854:CDS |
| TTCATAGAGTAATTGCTTCG+GGG | 0.668763 | 1.4:+14482907 | None:intergenic |
| AATGCTCAACTGTCGTCCCG+GGG | 0.671564 | 1.4:-14482336 | MS.gene31854:CDS |
| GATTAAGGCTCTTAACCATG+CGG | 0.671983 | 1.4:+14482228 | None:intergenic |
| CGGCTCGTTTGGCTTCATCG+GGG | 0.673846 | 1.4:-14482757 | MS.gene31854:CDS |
| TGATGAGTGTGATGACGATG+AGG | 0.676899 | 1.4:-14483101 | MS.gene31854:CDS |
| GAGATCATCGATCATAGCTG+AGG | 0.677523 | 1.4:+14482847 | None:intergenic |
| TAGAATTGCAGCCTACATGG+TGG | 0.682524 | 1.4:-14482789 | MS.gene31854:CDS |
| AGGGCGAGGATAGAATAGAA+CGG | 0.705742 | 1.4:-14482010 | MS.gene31854:CDS |
| AAGATAATAGAGGAAATGGG+GGG | 0.732816 | 1.4:-14481867 | MS.gene31854:CDS |
| GGATTCGGGATCATCAACAC+CGG | 0.740769 | 1.4:+14482481 | None:intergenic |
| GCTAGACGATCAGAAGACGG+AGG | 0.750067 | 1.4:+14482701 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATCCAAACTTAAAACA+TGG | + | chr1.4:14482733-14482752 | None:intergenic | 20.0% |
| !! | TAAATCCAAACTTAAAACAT+GGG | + | chr1.4:14482732-14482751 | None:intergenic | 20.0% |
| !!! | AAAGTTTTGTGATATTTCTT+TGG | + | chr1.4:14482446-14482465 | None:intergenic | 20.0% |
| ! | AAATATCACAAAACTTTCCT+CGG | - | chr1.4:14482449-14482468 | MS.gene31854:CDS | 25.0% |
| ! | CAAGAAATCTGATTCAAAAT+TGG | + | chr1.4:14482170-14482189 | None:intergenic | 25.0% |
| ! | TACAAGATAATAGAGGAAAT+GGG | - | chr1.4:14483510-14483529 | MS.gene31854:CDS | 25.0% |
| !! | CAATTTTGAATCAGATTTCT+TGG | - | chr1.4:14482168-14482187 | MS.gene31854:CDS | 25.0% |
| !!! | ATAGATTTTGATATCAACCA+AGG | - | chr1.4:14482808-14482827 | MS.gene31854:CDS | 25.0% |
| !!! | TTATAAAGCTTTGAAATGCA+AGG | - | chr1.4:14482654-14482673 | MS.gene31854:CDS | 25.0% |
| AAACTTATGTTTCGTCTACA+AGG | - | chr1.4:14482125-14482144 | MS.gene31854:CDS | 30.0% | |
| AAATGTCAAAGAAGCAATCA+GGG | - | chr1.4:14483461-14483480 | MS.gene31854:CDS | 30.0% | |
| ACAAGATAATAGAGGAAATG+GGG | - | chr1.4:14483511-14483530 | MS.gene31854:CDS | 30.0% | |
| ACGAAACATAAGTTTCAAAC+TGG | + | chr1.4:14482120-14482139 | None:intergenic | 30.0% | |
| ATTCATAGAGTAATTGCTTC+GGG | + | chr1.4:14482477-14482496 | None:intergenic | 30.0% | |
| CATTCATAGAGTAATTGCTT+CGG | + | chr1.4:14482478-14482497 | None:intergenic | 30.0% | |
| GAAAATACAAGAATTGGAGA+GGG | - | chr1.4:14482237-14482256 | MS.gene31854:CDS | 30.0% | |
| GCGATTGAAAATACAAGAAT+TGG | - | chr1.4:14482231-14482250 | MS.gene31854:CDS | 30.0% | |
| GGCTATTAAAGATGATAAGA+AGG | - | chr1.4:14482777-14482796 | MS.gene31854:CDS | 30.0% | |
| GTACAAGATAATAGAGGAAA+TGG | - | chr1.4:14483509-14483528 | MS.gene31854:CDS | 30.0% | |
| TATAGGCTTCAACAAATCTT+GGG | + | chr1.4:14483233-14483252 | None:intergenic | 30.0% | |
| TGAAAATACAAGAATTGGAG+AGG | - | chr1.4:14482236-14482255 | MS.gene31854:CDS | 30.0% | |
| TGACAAGTACAAGATAATAG+AGG | - | chr1.4:14483503-14483522 | MS.gene31854:CDS | 30.0% | |
| TTATAGGCTTCAACAAATCT+TGG | + | chr1.4:14483234-14483253 | None:intergenic | 30.0% | |
| TTTGGATTTATTGCTGCTAA+TGG | - | chr1.4:14482742-14482761 | MS.gene31854:CDS | 30.0% | |
| !!! | CTGTTACAAGTTTTGGATTA+AGG | + | chr1.4:14483170-14483189 | None:intergenic | 30.0% |
| AAGATAATAGAGGAAATGGG+GGG | - | chr1.4:14483513-14483532 | MS.gene31854:CDS | 35.0% | |
| AATTGAAGACCTTGATGCTA+CGG | + | chr1.4:14483013-14483032 | None:intergenic | 35.0% | |
| ACGATGAGGAAAACATGTTT+AGG | - | chr1.4:14482293-14482312 | MS.gene31854:CDS | 35.0% | |
| AGAAGCAAGTGTTTGTATCA+GGG | + | chr1.4:14482848-14482867 | None:intergenic | 35.0% | |
| ATTGATTATATCTCCGGAGT+TGG | - | chr1.4:14481817-14481836 | MS.gene31854:CDS | 35.0% | |
| CAAATGTCAAAGAAGCAATC+AGG | - | chr1.4:14483460-14483479 | MS.gene31854:CDS | 35.0% | |
| CAAGATAATAGAGGAAATGG+GGG | - | chr1.4:14483512-14483531 | MS.gene31854:CDS | 35.0% | |
| CACAGCAGAGTAGTAATTAT+AGG | + | chr1.4:14483250-14483269 | None:intergenic | 35.0% | |
| CGTCAAATTCAAAGCAATCA+GGG | + | chr1.4:14482204-14482223 | None:intergenic | 35.0% | |
| CTTATCAGGAGCAAAATCAT+GGG | + | chr1.4:14481912-14481931 | None:intergenic | 35.0% | |
| GCTACTAAGATTTGAATCTG+AGG | + | chr1.4:14482413-14482432 | None:intergenic | 35.0% | |
| GTCTTTGACCTATGATACTT+AGG | + | chr1.4:14482945-14482964 | None:intergenic | 35.0% | |
| TACATGCTTCTATGCTTATC+AGG | + | chr1.4:14481926-14481945 | None:intergenic | 35.0% | |
| TACCGTTGATACACTTTCAT+CGG | + | chr1.4:14483112-14483131 | None:intergenic | 35.0% | |
| TAGAAGCAAGTGTTTGTATC+AGG | + | chr1.4:14482849-14482868 | None:intergenic | 35.0% | |
| TCAACAAATCTTGGGAGAAA+GGG | + | chr1.4:14483225-14483244 | None:intergenic | 35.0% | |
| TCCAAAACTTGTAACAGTTG+TGG | - | chr1.4:14483173-14483192 | MS.gene31854:CDS | 35.0% | |
| TCTTTGACATTTGTGCTCAT+TGG | + | chr1.4:14483453-14483472 | None:intergenic | 35.0% | |
| TGATACAAACACTTGCTTCT+AGG | - | chr1.4:14482848-14482867 | MS.gene31854:CDS | 35.0% | |
| TTCAACAAATCTTGGGAGAA+AGG | + | chr1.4:14483226-14483245 | None:intergenic | 35.0% | |
| TTCATAGAGTAATTGCTTCG+GGG | + | chr1.4:14482476-14482495 | None:intergenic | 35.0% | |
| TTTCAACATTCAACCTATCC+TGG | + | chr1.4:14483308-14483327 | None:intergenic | 35.0% | |
| ! | AGGATAGGTTGAATGTTGAA+AGG | - | chr1.4:14483307-14483326 | MS.gene31854:CDS | 35.0% |
| ! | CCTGATTGCTTTGAATTTGA+CGG | - | chr1.4:14482202-14482221 | MS.gene31854:CDS | 35.0% |
| ! | TCCACAACTGTTACAAGTTT+TGG | + | chr1.4:14483177-14483196 | None:intergenic | 35.0% |
| !! | GGGTTATATATTGACTTCCT+TGG | + | chr1.4:14482828-14482847 | None:intergenic | 35.0% |
| !! | TGATATTTCTTTGGTGCTAC+TGG | + | chr1.4:14482437-14482456 | None:intergenic | 35.0% |
| AACAAATCTTGGGAGAAAGG+GGG | + | chr1.4:14483223-14483242 | None:intergenic | 40.0% | |
| AAGCAATCAGGGAACTCATA+AGG | - | chr1.4:14483472-14483491 | MS.gene31854:CDS | 40.0% | |
| ACCGTTGATACACTTTCATC+GGG | + | chr1.4:14483111-14483130 | None:intergenic | 40.0% | |
| AGCAATGCAGATACTATTCG+AGG | - | chr1.4:14482702-14482721 | MS.gene31854:CDS | 40.0% | |
| AGCTAATTCAGGAGGTTCTA+TGG | - | chr1.4:14482084-14482103 | MS.gene31854:CDS | 40.0% | |
| ATAGAACGGTATGAAGTTGC+CGG | - | chr1.4:14483384-14483403 | MS.gene31854:CDS | 40.0% | |
| CAACAAATCTTGGGAGAAAG+GGG | + | chr1.4:14483224-14483243 | None:intergenic | 40.0% | |
| CCGTCAAATTCAAAGCAATC+AGG | + | chr1.4:14482205-14482224 | None:intergenic | 40.0% | |
| GAATGTTGAAAGGCAATGCT+TGG | - | chr1.4:14483317-14483336 | MS.gene31854:CDS | 40.0% | |
| GATTAAGGCTCTTAACCATG+CGG | + | chr1.4:14483155-14483174 | None:intergenic | 40.0% | |
| GCCAAGCTATACTCGTTAAA+GGG | - | chr1.4:14481860-14481879 | MS.gene31854:CDS | 40.0% | |
| GCTTATCAGGAGCAAAATCA+TGG | + | chr1.4:14481913-14481932 | None:intergenic | 40.0% | |
| GGAAATTCTGTTCATGCTGA+TGG | - | chr1.4:14482040-14482059 | MS.gene31854:CDS | 40.0% | |
| TCCCTTTAACGAGTATAGCT+TGG | + | chr1.4:14481864-14481883 | None:intergenic | 40.0% | |
| TCTGAGGAAAGAGATTCCTT+TGG | + | chr1.4:14482397-14482416 | None:intergenic | 40.0% | |
| TGCCAAGCTATACTCGTTAA+AGG | - | chr1.4:14481859-14481878 | MS.gene31854:CDS | 40.0% | |
| TTCAATTCAGGGAGAACCTT+CGG | - | chr1.4:14482567-14482586 | MS.gene31854:CDS | 40.0% | |
| ! | AAATGGGGGGACTTCATTTT+GGG | - | chr1.4:14483526-14483545 | MS.gene31854:CDS | 40.0% |
| ! | ACTTGATTGTTGCTTCAGCA+TGG | - | chr1.4:14483562-14483581 | MS.gene31854:CDS | 40.0% |
| ! | AGGCAGTTGGTTTCAATTCA+GGG | - | chr1.4:14482556-14482575 | MS.gene31854:CDS | 40.0% |
| ! | ATGATGCGACTTGTTCTGAA+TGG | + | chr1.4:14482368-14482387 | None:intergenic | 40.0% |
| ! | GTTTAGGACTGTTCAAAGCA+TGG | - | chr1.4:14482309-14482328 | MS.gene31854:CDS | 40.0% |
| ! | TGATGCGACTTGTTCTGAAT+GGG | + | chr1.4:14482367-14482386 | None:intergenic | 40.0% |
| !! | GAAAAGCTAGCAGAAGTACT+CGG | - | chr1.4:14482967-14482986 | MS.gene31854:CDS | 40.0% |
| !! | TGATAGAACCGTCTAGTTCT+GGG | - | chr1.4:14482011-14482030 | MS.gene31854:CDS | 40.0% |
| !!! | GTGTGCCCATGTTTTAAGTT+TGG | - | chr1.4:14482724-14482743 | MS.gene31854:CDS | 40.0% |
| AAACACTTGCTTCTAGGCCA+GGG | - | chr1.4:14482854-14482873 | MS.gene31854:CDS | 45.0% | |
| AACAGATCGTTGCACGGATT+CGG | + | chr1.4:14482917-14482936 | None:intergenic | 45.0% | |
| AATTTCGTGCCGTAGCATCA+AGG | - | chr1.4:14483001-14483020 | MS.gene31854:CDS | 45.0% | |
| ACACCGGTCAATCTCACATA+AGG | + | chr1.4:14482886-14482905 | None:intergenic | 45.0% | |
| AGGGCGAGGATAGAATAGAA+CGG | - | chr1.4:14483370-14483389 | MS.gene31854:CDS | 45.0% | |
| ATCAGGAGCAAAATCATGGG+AGG | + | chr1.4:14481909-14481928 | None:intergenic | 45.0% | |
| ATGAAGTTGCCGGAAAATGG+AGG | - | chr1.4:14483394-14483413 | MS.gene31854:CDS | 45.0% | |
| ATGGAGGGCAAGGATGAAAA+TGG | - | chr1.4:14483410-14483429 | MS.gene31854:CDS | 45.0% | |
| CAGCTATGATCGATGATCTC+AGG | - | chr1.4:14482536-14482555 | MS.gene31854:CDS | 45.0% | |
| CCACCTTATGTGAGATTGAC+CGG | - | chr1.4:14482880-14482899 | MS.gene31854:CDS | 45.0% | |
| CCTGATATCCCAGAACTAGA+CGG | + | chr1.4:14482022-14482041 | None:intergenic | 45.0% | |
| CTTCCTTGATTCACCTACAG+AGG | - | chr1.4:14481985-14482004 | MS.gene31854:CDS | 45.0% | |
| GAGATCATCGATCATAGCTG+AGG | + | chr1.4:14482536-14482555 | None:intergenic | 45.0% | |
| GCTACGGCACGAAATTCAAA+TGG | + | chr1.4:14482997-14483016 | None:intergenic | 45.0% | |
| GGATAGAATTGCAGCCTACA+TGG | - | chr1.4:14482588-14482607 | MS.gene31854:CDS | 45.0% | |
| GGTATGAAGTTGCCGGAAAA+TGG | - | chr1.4:14483391-14483410 | MS.gene31854:CDS | 45.0% | |
| GGTTCTATCAGTTCCTCTGT+AGG | + | chr1.4:14482001-14482020 | None:intergenic | 45.0% | |
| GTCAATGTCATTGCGTGTGA+GGG | - | chr1.4:14483351-14483370 | MS.gene31854:CDS | 45.0% | |
| GTTCCTCTGTAGGTGAATCA+AGG | + | chr1.4:14481991-14482010 | None:intergenic | 45.0% | |
| GTTGGAGGCCTAAGTATCAT+AGG | - | chr1.4:14482934-14482953 | MS.gene31854:CDS | 45.0% | |
| TACCAGCTCAGAGCTAATTC+AGG | - | chr1.4:14482073-14482092 | MS.gene31854:CDS | 45.0% | |
| TAGAATTGCAGCCTACATGG+TGG | - | chr1.4:14482591-14482610 | MS.gene31854:CDS | 45.0% | |
| TAGGCTGCAATTCTATCCGA+AGG | + | chr1.4:14482586-14482605 | None:intergenic | 45.0% | |
| TGAAGTTGCCGGAAAATGGA+GGG | - | chr1.4:14483395-14483414 | MS.gene31854:CDS | 45.0% | |
| TGTCAATGTCATTGCGTGTG+AGG | - | chr1.4:14483350-14483369 | MS.gene31854:CDS | 45.0% | |
| ! | CAGGCAGTTGGTTTCAATTC+AGG | - | chr1.4:14482555-14482574 | MS.gene31854:CDS | 45.0% |
| ! | CGACTTGTTCTGAATGGGAT+TGG | + | chr1.4:14482362-14482381 | None:intergenic | 45.0% |
| ! | CTGATAGAACCGTCTAGTTC+TGG | - | chr1.4:14482010-14482029 | MS.gene31854:CDS | 45.0% |
| ! | GAAATGGGGGGACTTCATTT+TGG | - | chr1.4:14483525-14483544 | MS.gene31854:CDS | 45.0% |
| ! | GCCCGATGAAAGTGTATCAA+CGG | - | chr1.4:14483107-14483126 | MS.gene31854:CDS | 45.0% |
| ! | TGATGAGTGTGATGACGATG+AGG | - | chr1.4:14482279-14482298 | MS.gene31854:CDS | 45.0% |
| !! | TGCTAATGGTGCTATCTCTG+AGG | - | chr1.4:14482756-14482775 | MS.gene31854:CDS | 45.0% |
| AAATCATGGGAGGACAAGCC+AGG | + | chr1.4:14481899-14481918 | None:intergenic | 50.0% | |
| ACAGATCGTTGCACGGATTC+GGG | + | chr1.4:14482916-14482935 | None:intergenic | 50.0% | |
| AGGGCAAGGATGAAAATGGC+TGG | - | chr1.4:14483414-14483433 | MS.gene31854:CDS | 50.0% | |
| AGTTGGCTGATGCGTCGTAT+GGG | - | chr1.4:14481834-14481853 | MS.gene31854:CDS | 50.0% | |
| CAAACACTTGCTTCTAGGCC+AGG | - | chr1.4:14482853-14482872 | MS.gene31854:CDS | 50.0% | |
| CAGCTCAGAGCTAATTCAGG+AGG | - | chr1.4:14482076-14482095 | MS.gene31854:CDS | 50.0% | |
| CCGGTCAATCTCACATAAGG+TGG | + | chr1.4:14482883-14482902 | None:intergenic | 50.0% | |
| GAATCCGTGCAACGATCTGT+TGG | - | chr1.4:14482916-14482935 | MS.gene31854:CDS | 50.0% | |
| GATCGATGATCTCAGGCAGT+TGG | - | chr1.4:14482543-14482562 | MS.gene31854:CDS | 50.0% | |
| GCTGCTAGACGATCAGAAGA+CGG | + | chr1.4:14482685-14482704 | None:intergenic | 50.0% | |
| GGACAAGCCAGGTGTAACAT+CGG | + | chr1.4:14481888-14481907 | None:intergenic | 50.0% | |
| GGATTCGGGATCATCAACAC+CGG | + | chr1.4:14482902-14482921 | None:intergenic | 50.0% | |
| TCAATGCTCAACTGTCGTCC+CGG | - | chr1.4:14483042-14483061 | MS.gene31854:CDS | 50.0% | |
| TCTTAACCATGCGGAGAAGC+TGG | + | chr1.4:14483146-14483165 | None:intergenic | 50.0% | |
| TGAAAGGCAATGCTTGGCGA+GGG | - | chr1.4:14483323-14483342 | MS.gene31854:CDS | 50.0% | |
| TGTGCTAGCGCACTTTCAGA+AGG | - | chr1.4:14482496-14482515 | MS.gene31854:CDS | 50.0% | |
| TTGAAAGGCAATGCTTGGCG+AGG | - | chr1.4:14483322-14483341 | MS.gene31854:CDS | 50.0% | |
| TTGGCAGACTCAGCAAAGTC+AGG | + | chr1.4:14482343-14482362 | None:intergenic | 50.0% | |
| ! | AACCTATCCTGGCTCTCTCT+CGG | + | chr1.4:14483297-14483316 | None:intergenic | 50.0% |
| ! | ATTGCAGCCTACATGGTGGA+AGG | - | chr1.4:14482595-14482614 | MS.gene31854:CDS | 50.0% |
| ! | CATCCTTGCCCTCCATTTTC+CGG | + | chr1.4:14483406-14483425 | None:intergenic | 50.0% |
| ! | CTACATGGTGGAAGGACTTG+CGG | - | chr1.4:14482603-14482622 | MS.gene31854:CDS | 50.0% |
| !! | CCGTCTAGTTCTGGGATATC+AGG | - | chr1.4:14482019-14482038 | MS.gene31854:CDS | 50.0% |
| !! | CTCCTGAATTAGCTCTGAGC+TGG | + | chr1.4:14482078-14482097 | None:intergenic | 50.0% |
| !! | GGACGACAGTTGAGCATTGA+TGG | + | chr1.4:14483042-14483061 | None:intergenic | 50.0% |
| AAGGGAGCCGATGTTACACC+TGG | - | chr1.4:14481878-14481897 | MS.gene31854:CDS | 55.0% | |
| AATGCTCAACTGTCGTCCCG+GGG | - | chr1.4:14483044-14483063 | MS.gene31854:CDS | 55.0% | |
| AGTAATTGCTTCGGGGTCCG+AGG | + | chr1.4:14482469-14482488 | None:intergenic | 55.0% | |
| CAATGCTCAACTGTCGTCCC+GGG | - | chr1.4:14483043-14483062 | MS.gene31854:CDS | 55.0% | |
| CATCGGGCATGTGATGAAGC+TGG | + | chr1.4:14483095-14483114 | None:intergenic | 55.0% | |
| CGCAAGTCCTTCCACCATGT+AGG | + | chr1.4:14482605-14482624 | None:intergenic | 55.0% | |
| CTCACATAAGGTGGCTTCCC+TGG | + | chr1.4:14482874-14482893 | None:intergenic | 55.0% | |
| GAGTTGGCTGATGCGTCGTA+TGG | - | chr1.4:14481833-14481852 | MS.gene31854:CDS | 55.0% | |
| GCCTCCAACAGATCGTTGCA+CGG | + | chr1.4:14482923-14482942 | None:intergenic | 55.0% | |
| GCTAGACGATCAGAAGACGG+AGG | + | chr1.4:14482682-14482701 | None:intergenic | 55.0% | |
| GTCGCATCATGACTCGCCAA+AGG | - | chr1.4:14482378-14482397 | MS.gene31854:CDS | 55.0% | |
| GTTCACCACAAGAGCTTCCC+CGG | + | chr1.4:14483064-14483083 | None:intergenic | 55.0% | |
| TACGACGCATCAGCCAACTC+CGG | + | chr1.4:14481833-14481852 | None:intergenic | 55.0% | |
| TCCGTGCAACGATCTGTTGG+AGG | - | chr1.4:14482919-14482938 | MS.gene31854:CDS | 55.0% | |
| TTCACCACAAGAGCTTCCCC+GGG | + | chr1.4:14483063-14483082 | None:intergenic | 55.0% | |
| TTCCGAGAGAGAGCCAGGAT+AGG | - | chr1.4:14483292-14483311 | MS.gene31854:CDS | 55.0% | |
| TTGCCGGAAAATGGAGGGCA+AGG | - | chr1.4:14483400-14483419 | MS.gene31854:CDS | 55.0% | |
| ! | TGCGGCTCGTTTGGCTTCAT+CGG | - | chr1.4:14482621-14482640 | MS.gene31854:CDS | 55.0% |
| ! | TGGGAGAAAGGGGGAAGTGT+TGG | + | chr1.4:14483214-14483233 | None:intergenic | 55.0% |
| ! | TGGGGGGACTTCATTTTGGG+TGG | - | chr1.4:14483529-14483548 | MS.gene31854:CDS | 55.0% |
| !! | GAATTGGAGAGGGCACTGCT+TGG | - | chr1.4:14482247-14482266 | MS.gene31854:CDS | 55.0% |
| !! | GGGACTTCATTTTGGGTGGG+AGG | - | chr1.4:14483533-14483552 | MS.gene31854:CDS | 55.0% |
| !! | GGGGGGACTTCATTTTGGGT+GGG | - | chr1.4:14483530-14483549 | MS.gene31854:CDS | 55.0% |
| ACGAGACCAGCTTCTCCGCA+TGG | - | chr1.4:14483137-14483156 | MS.gene31854:CDS | 60.0% | |
| CACTCTTCCGAGAGAGAGCC+AGG | - | chr1.4:14483287-14483306 | MS.gene31854:CDS | 60.0% | |
| GGAAGGACTTGCGGCTCGTT+TGG | - | chr1.4:14482612-14482631 | MS.gene31854:CDS | 60.0% | |
| TGTCATTGCGTGTGAGGGCG+AGG | - | chr1.4:14483356-14483375 | MS.gene31854:CDS | 60.0% | |
| ! | CGGCTCGTTTGGCTTCATCG+GGG | - | chr1.4:14482623-14482642 | MS.gene31854:CDS | 60.0% |
| ! | CTGGCTCTCTCTCGGAAGAG+TGG | + | chr1.4:14483289-14483308 | None:intergenic | 60.0% |
| ! | GCGGCTCGTTTGGCTTCATC+GGG | - | chr1.4:14482622-14482641 | MS.gene31854:CDS | 60.0% |
| TCGTCCCGGGGAAGCTCTTG+TGG | - | chr1.4:14483056-14483075 | MS.gene31854:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 14481812 | 14483590 | 14481812 | ID=MS.gene31854 |
| chr1.4 | mRNA | 14481812 | 14483590 | 14481812 | ID=MS.gene31854.t1;Parent=MS.gene31854 |
| chr1.4 | exon | 14481812 | 14483590 | 14481812 | ID=MS.gene31854.t1.exon1;Parent=MS.gene31854.t1 |
| chr1.4 | CDS | 14481812 | 14483590 | 14481812 | ID=cds.MS.gene31854.t1;Parent=MS.gene31854.t1 |
| Gene Sequence |
| Protein sequence |
