Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33259.t1 | XP_013452478.1 | 95.9 | 364 | 15 | 0 | 76 | 439 | 171 | 534 | 1.50E-201 | 712.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33259.t1 | Q9P7G4 | 40.8 | 179 | 95 | 4 | 257 | 426 | 146 | 322 | 9.8e-29 | 129.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33259.t1 | A0A072UAP6 | 95.9 | 364 | 15 | 0 | 76 | 439 | 171 | 534 | 1.1e-201 | 712.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene33259 | 0.849441 | 3.23E-60 | -1.69E-46 |
| MS.gene049159 | MS.gene33259 | 0.827961 | 1.17E-54 | -1.69E-46 |
| MS.gene04918 | MS.gene33259 | 0.807064 | 6.07E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene33259 | 0.840033 | 1.11E-57 | -1.69E-46 |
| MS.gene049283 | MS.gene33259 | 0.823106 | 1.66E-53 | -1.69E-46 |
| MS.gene049368 | MS.gene33259 | 0.805328 | 1.41E-49 | -1.69E-46 |
| MS.gene049452 | MS.gene33259 | 0.80952 | 1.82E-50 | -1.69E-46 |
| MS.gene049499 | MS.gene33259 | 0.819141 | 1.36E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene33259 | 0.857841 | 1.24E-62 | -1.69E-46 |
| MS.gene050026 | MS.gene33259 | 0.808773 | 2.63E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene33259 | 0.805701 | 1.18E-49 | -1.69E-46 |
| MS.gene050759 | MS.gene33259 | 0.806774 | 6.99E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene33259 | 0.817782 | 2.76E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene33259 | 0.834669 | 2.62E-56 | -1.69E-46 |
| MS.gene051744 | MS.gene33259 | 0.804338 | 2.27E-49 | -1.69E-46 |
| MS.gene051800 | MS.gene33259 | 0.800226 | 1.59E-48 | -1.69E-46 |
| MS.gene052463 | MS.gene33259 | 0.831805 | 1.36E-55 | -1.69E-46 |
| MS.gene052519 | MS.gene33259 | 0.813658 | 2.29E-51 | -1.69E-46 |
| MS.gene052534 | MS.gene33259 | 0.810177 | 1.31E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene33259 | 0.800368 | 1.49E-48 | -1.69E-46 |
| MS.gene052584 | MS.gene33259 | 0.815173 | 1.06E-51 | -1.69E-46 |
| MS.gene053006 | MS.gene33259 | 0.807831 | 4.17E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene33259 | 0.832155 | 1.11E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene33259 | 0.81038 | 1.19E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene33259 | 0.800714 | 1.27E-48 | -1.69E-46 |
| MS.gene054236 | MS.gene33259 | 0.808975 | 2.38E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene33259 | 0.83373 | 4.51E-56 | -1.69E-46 |
| MS.gene054651 | MS.gene33259 | 0.817384 | 3.39E-52 | -1.69E-46 |
| MS.gene054657 | MS.gene33259 | 0.816027 | 6.83E-52 | -1.69E-46 |
| MS.gene05517 | MS.gene33259 | 0.801959 | 7.04E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene33259 | 0.823992 | 1.03E-53 | -1.69E-46 |
| MS.gene055724 | MS.gene33259 | 0.820076 | 8.30E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene33259 | 0.831358 | 1.75E-55 | -1.69E-46 |
| MS.gene055841 | MS.gene33259 | 0.820707 | 5.95E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene33259 | 0.810027 | 1.41E-50 | -1.69E-46 |
| MS.gene056045 | MS.gene33259 | 0.806473 | 8.09E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene33259 | 0.828337 | 9.51E-55 | -1.69E-46 |
| MS.gene056480 | MS.gene33259 | 0.803785 | 2.95E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene33259 | 0.808951 | 2.41E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene33259 | 0.825792 | 3.86E-54 | -1.69E-46 |
| MS.gene056776 | MS.gene33259 | 0.830863 | 2.31E-55 | -1.69E-46 |
| MS.gene05690 | MS.gene33259 | 0.810864 | 9.32E-51 | -1.69E-46 |
| MS.gene057034 | MS.gene33259 | 0.818473 | 1.92E-52 | -1.69E-46 |
| MS.gene057208 | MS.gene33259 | 0.836949 | 6.93E-57 | -1.69E-46 |
| MS.gene057598 | MS.gene33259 | 0.816158 | 6.39E-52 | -1.69E-46 |
| MS.gene058008 | MS.gene33259 | 0.819216 | 1.30E-52 | -1.69E-46 |
| MS.gene058009 | MS.gene33259 | 0.834922 | 2.26E-56 | -1.69E-46 |
| MS.gene058010 | MS.gene33259 | 0.833851 | 4.21E-56 | -1.69E-46 |
| MS.gene058081 | MS.gene33259 | 0.805705 | 1.17E-49 | -1.69E-46 |
| MS.gene058279 | MS.gene33259 | 0.800438 | 1.44E-48 | -1.69E-46 |
| MS.gene058427 | MS.gene33259 | 0.808486 | 3.03E-50 | -1.69E-46 |
| MS.gene058548 | MS.gene33259 | 0.804891 | 1.74E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene33259 | 0.814045 | 1.88E-51 | -1.69E-46 |
| MS.gene058781 | MS.gene33259 | 0.824889 | 6.32E-54 | -1.69E-46 |
| MS.gene058783 | MS.gene33259 | 0.82982 | 4.16E-55 | -1.69E-46 |
| MS.gene058979 | MS.gene33259 | 0.833895 | 4.10E-56 | -1.69E-46 |
| MS.gene059283 | MS.gene33259 | 0.831353 | 1.75E-55 | -1.69E-46 |
| MS.gene05952 | MS.gene33259 | 0.802574 | 5.26E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene33259 | 0.820375 | 7.09E-53 | -1.69E-46 |
| MS.gene060011 | MS.gene33259 | 0.838669 | 2.51E-57 | -1.69E-46 |
| MS.gene060322 | MS.gene33259 | 0.80357 | 3.27E-49 | -1.69E-46 |
| MS.gene060435 | MS.gene33259 | 0.802788 | 4.75E-49 | -1.69E-46 |
| MS.gene060527 | MS.gene33259 | 0.813841 | 2.09E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene33259 | 0.842086 | 3.21E-58 | -1.69E-46 |
| MS.gene060932 | MS.gene33259 | 0.837331 | 5.54E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene33259 | 0.829786 | 4.24E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene33259 | 0.827727 | 1.33E-54 | -1.69E-46 |
| MS.gene06121 | MS.gene33259 | 0.800424 | 1.45E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33259.t1 | MTR_6g463380 | 94.533 | 439 | 24 | 0 | 1 | 439 | 96 | 534 | 0.0 | 862 |
| MS.gene33259.t1 | MTR_3g006860 | 91.800 | 439 | 36 | 0 | 1 | 439 | 92 | 530 | 0.0 | 834 |
| MS.gene33259.t1 | MTR_6g463380 | 93.593 | 359 | 23 | 0 | 1 | 359 | 96 | 454 | 0.0 | 702 |
| MS.gene33259.t1 | MTR_6g463380 | 93.838 | 357 | 22 | 0 | 1 | 357 | 96 | 452 | 0.0 | 699 |
| MS.gene33259.t1 | MTR_6g079410 | 49.220 | 449 | 136 | 12 | 45 | 431 | 46 | 464 | 4.41e-127 | 376 |
| MS.gene33259.t1 | MTR_6g061650 | 53.495 | 329 | 104 | 8 | 109 | 433 | 32 | 315 | 9.95e-105 | 313 |
| MS.gene33259.t1 | MTR_6g006850 | 36.335 | 322 | 155 | 7 | 122 | 436 | 29 | 307 | 2.02e-54 | 184 |
| MS.gene33259.t1 | MTR_1g014390 | 47.208 | 197 | 74 | 3 | 237 | 430 | 119 | 288 | 9.54e-50 | 171 |
| MS.gene33259.t1 | MTR_6g006710 | 33.887 | 301 | 118 | 6 | 142 | 436 | 68 | 293 | 1.76e-42 | 152 |
| MS.gene33259.t1 | MTR_1g029560 | 42.157 | 204 | 93 | 5 | 239 | 436 | 18 | 202 | 6.60e-41 | 145 |
| MS.gene33259.t1 | MTR_1g012010 | 45.833 | 120 | 62 | 1 | 240 | 359 | 124 | 240 | 2.53e-25 | 103 |
| MS.gene33259.t1 | MTR_1g012015 | 60.000 | 75 | 27 | 1 | 359 | 430 | 23 | 97 | 3.91e-24 | 96.7 |
| MS.gene33259.t1 | MTR_7g025575 | 59.091 | 88 | 29 | 2 | 358 | 439 | 13 | 99 | 5.73e-24 | 96.7 |
| MS.gene33259.t1 | MTR_6g080120 | 68.000 | 50 | 14 | 1 | 358 | 407 | 1 | 48 | 1.45e-13 | 65.9 |
| MS.gene33259.t1 | MTR_6g079950 | 41.791 | 67 | 38 | 1 | 370 | 436 | 1 | 66 | 5.14e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33259.t1 | AT5G51740 | 57.373 | 434 | 159 | 6 | 10 | 439 | 31 | 442 | 1.66e-174 | 496 |
| MS.gene33259.t1 | AT5G51740 | 57.373 | 434 | 159 | 6 | 10 | 439 | 74 | 485 | 5.27e-174 | 496 |
| MS.gene33259.t1 | AT5G51740 | 53.276 | 351 | 140 | 4 | 10 | 357 | 74 | 403 | 3.27e-128 | 377 |
Find 99 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTAAGAGGTTAGGGAAAA+TGG | 0.112500 | 6.3:+59235136 | MS.gene33259:CDS |
| ATGAGGTTCTTGATGATAAA+TGG | 0.155660 | 6.3:+59235750 | MS.gene33259:CDS |
| TCCAAAGGTGTTAGCTTTAA+TGG | 0.157644 | 6.3:+59235191 | MS.gene33259:CDS |
| TGGATTGAATTGGGAGATTT+TGG | 0.167567 | 6.3:+59235835 | MS.gene33259:CDS |
| TGTCAAGGTGGTAACTTTAA+TGG | 0.209828 | 6.3:+59235092 | MS.gene33259:CDS |
| TTGAGATAAATAAGAATATT+GGG | 0.260342 | 6.3:+59235162 | MS.gene33259:CDS |
| TTTGAGATAAATAAGAATAT+TGG | 0.272846 | 6.3:+59235161 | MS.gene33259:CDS |
| ATCCTAACTCTCACACTTTC+AGG | 0.275058 | 6.3:-59235554 | None:intergenic |
| GGATTCTGAAACCAATTCTT+TGG | 0.281604 | 6.3:-59235335 | None:intergenic |
| GCAGAGATAGCAACTATTAT+TGG | 0.282923 | 6.3:+59235947 | MS.gene33259:CDS |
| GGTTCAGAAGAGTAGGAAAA+AGG | 0.286020 | 6.3:+59235772 | MS.gene33259:CDS |
| AAATGTGTTCGCTTCGTATA+AGG | 0.292798 | 6.3:-59235434 | None:intergenic |
| CGCATTTGGATGGATTGAAT+TGG | 0.304915 | 6.3:+59235825 | MS.gene33259:CDS |
| CCATCCAAATGCGACGTATA+AGG | 0.317832 | 6.3:-59235815 | None:intergenic |
| AACCAATTCTTTGGCCCTCT+TGG | 0.319495 | 6.3:-59235326 | None:intergenic |
| TGGTGTTGAAGGATTTCTTT+AGG | 0.322830 | 6.3:+59240518 | MS.gene33259:CDS |
| TCTTCAATTCCTAAGAGGTT+AGG | 0.330856 | 6.3:+59235128 | MS.gene33259:CDS |
| TGGGAAGATAGTCGTGTTTA+CGG | 0.331309 | 6.3:+59235898 | MS.gene33259:CDS |
| CCAAAGGTGTTAGCTTTAAT+GGG | 0.339118 | 6.3:+59235192 | MS.gene33259:CDS |
| GACATAGTGTTGACAATATC+AGG | 0.345694 | 6.3:-59236416 | None:intergenic |
| ACACTTTCAGGATGCATTGC+AGG | 0.348683 | 6.3:-59235542 | None:intergenic |
| GCAACCTTATACGTCGCATT+TGG | 0.350333 | 6.3:+59235811 | MS.gene33259:CDS |
| GTCAAGGTGGTAACTTTAAT+GGG | 0.361635 | 6.3:+59235093 | MS.gene33259:CDS |
| AGACTCTTCTCCATCTCTTT+CGG | 0.364887 | 6.3:-59235467 | None:intergenic |
| AGCCAAGAGGGCCAAAGAAT+TGG | 0.368828 | 6.3:+59235324 | MS.gene33259:CDS |
| AAGAAAACGAGCAGAATTAC+TGG | 0.372401 | 6.3:+59240437 | MS.gene33259:CDS |
| CCCATTAAAGCTAACACCTT+TGG | 0.373919 | 6.3:-59235192 | None:intergenic |
| CTTCAATTCCTAAGAGGTTA+GGG | 0.379836 | 6.3:+59235129 | MS.gene33259:CDS |
| CCTAAGAGGTTAGGGAAAAT+GGG | 0.389385 | 6.3:+59235137 | MS.gene33259:CDS |
| CATCTTCTCAGCACTGTGTC+TGG | 0.400313 | 6.3:-59236339 | None:intergenic |
| AAGAGATGGAGAAGAGTCTT+GGG | 0.405364 | 6.3:+59235471 | MS.gene33259:CDS |
| GCTTCAGAAAATTCTGTGTT+TGG | 0.406389 | 6.3:+59235650 | MS.gene33259:CDS |
| CATCAAGAACCTCATCTTCC+CGG | 0.410729 | 6.3:-59235742 | None:intergenic |
| AAGGGAAAGTTGGAGGGAAT+TGG | 0.419080 | 6.3:+59235717 | MS.gene33259:CDS |
| GCATTTGGATGGATTGAATT+GGG | 0.421702 | 6.3:+59235826 | MS.gene33259:CDS |
| GGGAAGATAGTCGTGTTTAC+GGG | 0.423649 | 6.3:+59235899 | MS.gene33259:CDS |
| AGAGAAGGACATGGTGTTGA+AGG | 0.427494 | 6.3:+59240507 | MS.gene33259:CDS |
| AGAATTGGTTTCAGAATCCT+AGG | 0.434255 | 6.3:+59235339 | MS.gene33259:CDS |
| ACTGAAAATGAAGGGAAAGT+TGG | 0.438682 | 6.3:+59235707 | MS.gene33259:CDS |
| GTTGAAGAGAGGGTTGAGTA+AGG | 0.449933 | 6.3:+59235601 | MS.gene33259:CDS |
| ACCTAAAGTCTACGAAAAGT+TGG | 0.458356 | 6.3:+59240359 | MS.gene33259:CDS |
| TGAGGTTCTTGATGATAAAT+GGG | 0.460396 | 6.3:+59235751 | MS.gene33259:CDS |
| TTTGGTGGTGAAGGATCCTA+TGG | 0.460965 | 6.3:+59235853 | MS.gene33259:CDS |
| TATTTCGCTACTCATCCATC+TGG | 0.461058 | 6.3:+59240414 | MS.gene33259:CDS |
| ATCTAAAAGCTTAGAATCGC+CGG | 0.472748 | 6.3:-59240391 | None:intergenic |
| AAAGAGATGGAGAAGAGTCT+TGG | 0.473631 | 6.3:+59235470 | MS.gene33259:CDS |
| AGAATTACTGGCTCAAGCTC+AGG | 0.477979 | 6.3:+59240449 | MS.gene33259:CDS |
| AATAATTACCTTCTGGAGAA+AGG | 0.480591 | 6.3:-59236458 | None:intergenic |
| AGAAGATGACAAAGAATATG+TGG | 0.484136 | 6.3:+59236354 | MS.gene33259:CDS |
| AAGTTGGAGGGAATTGGCAC+CGG | 0.485472 | 6.3:+59235723 | MS.gene33259:CDS |
| CCTTATACGTCGCATTTGGA+TGG | 0.493369 | 6.3:+59235815 | MS.gene33259:CDS |
| AATAATAAGAATATTAGAGT+TGG | 0.496382 | 6.3:+59235068 | MS.gene33259:CDS |
| ATTGGTGTAGTGGTAGGTTC+AGG | 0.503610 | 6.3:+59235371 | MS.gene33259:CDS |
| AATCCTAGGCATGTTATGAT+TGG | 0.503650 | 6.3:+59235353 | MS.gene33259:CDS |
| ATCCTGAAAGTGTGAGAGTT+AGG | 0.512578 | 6.3:+59235552 | MS.gene33259:CDS |
| AATGCATTGACTGAAAATGA+AGG | 0.512873 | 6.3:+59235698 | MS.gene33259:CDS |
| CCTAAAGTCTACGAAAAGTT+GGG | 0.514744 | 6.3:+59240360 | MS.gene33259:CDS |
| TTATCGAAGCGTTGAAGAGA+GGG | 0.518421 | 6.3:+59235591 | MS.gene33259:CDS |
| AATATTAGAGTTGGTTGTCA+AGG | 0.519986 | 6.3:+59235077 | MS.gene33259:CDS |
| ATAAATGGGTTCAGAAGAGT+AGG | 0.531439 | 6.3:+59235765 | MS.gene33259:CDS |
| AGTTGGAGGGAATTGGCACC+GGG | 0.532756 | 6.3:+59235724 | MS.gene33259:CDS |
| TGAGATAAATAAGAATATTG+GGG | 0.535578 | 6.3:+59235163 | MS.gene33259:CDS |
| TGCCACACGTGGATCGTAGC+CGG | 0.536111 | 6.3:-59240337 | None:intergenic |
| ATTAGAGTTGGTTGTCAAGG+TGG | 0.541340 | 6.3:+59235080 | MS.gene33259:CDS |
| CTTCCCACCAGGTAAGCAAA+AGG | 0.542507 | 6.3:-59235882 | None:intergenic |
| GATAAATAAGAATATTGGGG+TGG | 0.543034 | 6.3:+59235166 | MS.gene33259:CDS |
| AATATTGGGGTGGGTTCCAA+AGG | 0.550451 | 6.3:+59235176 | MS.gene33259:CDS |
| CTTCTATTAGTTGCATCCGC+CGG | 0.553436 | 6.3:+59240318 | MS.gene33259:CDS |
| TACGGCTACCTTTCTCCAGA+AGG | 0.558879 | 6.3:+59236450 | MS.gene33259:CDS |
| GAAAATGAAGGGAAAGTTGG+AGG | 0.559808 | 6.3:+59235710 | MS.gene33259:CDS |
| AAGCAAAAGGCATTAACCAT+AGG | 0.561244 | 6.3:-59235869 | None:intergenic |
| ATAAATAAGAATATTGGGGT+GGG | 0.563572 | 6.3:+59235167 | MS.gene33259:CDS |
| TTTAGGAGATTAGACAAAAG+GGG | 0.565002 | 6.3:+59235236 | MS.gene33259:CDS |
| GTTATGATTGGTGTAGTGGT+AGG | 0.565631 | 6.3:+59235365 | MS.gene33259:CDS |
| ACACCAATCATAACATGCCT+AGG | 0.568681 | 6.3:-59235356 | None:intergenic |
| GAAATTGAAGCTGATTACAT+TGG | 0.569179 | 6.3:+59240294 | MS.gene33259:CDS |
| GGTTGAGTAAGGAGAATGTG+TGG | 0.571308 | 6.3:+59235612 | MS.gene33259:CDS |
| CTGTGTTTGGTGAAGAAAGT+GGG | 0.573793 | 6.3:+59235663 | MS.gene33259:CDS |
| ACTGGCTCAAGCTCAGGTGA+TGG | 0.577941 | 6.3:+59240455 | MS.gene33259:CDS |
| TCTGTGTTTGGTGAAGAAAG+TGG | 0.579845 | 6.3:+59235662 | MS.gene33259:CDS |
| ATGCATTGACTGAAAATGAA+GGG | 0.590623 | 6.3:+59235699 | MS.gene33259:CDS |
| TAGCGAGTTTGAGAAGATGA+AGG | 0.594694 | 6.3:+59235496 | MS.gene33259:CDS |
| GCATGTTATGATTGGTGTAG+TGG | 0.600913 | 6.3:+59235361 | MS.gene33259:CDS |
| AGCAACTATTATTGGACATG+AGG | 0.602186 | 6.3:+59235955 | MS.gene33259:CDS |
| GAGTTTGAGAAGATGAAGGC+GGG | 0.604274 | 6.3:+59235500 | MS.gene33259:CDS |
| ATTATCGAAGCGTTGAAGAG+AGG | 0.605086 | 6.3:+59235590 | MS.gene33259:CDS |
| GAAGATGACAAAGAATATGT+GGG | 0.612484 | 6.3:+59236355 | MS.gene33259:CDS |
| GAATTGGCACCGGGAAGATG+AGG | 0.612493 | 6.3:+59235733 | MS.gene33259:CDS |
| AAAATGAAGGGAAAGTTGGA+GGG | 0.619844 | 6.3:+59235711 | MS.gene33259:CDS |
| TGATTAGGTTGGACATGCTG+TGG | 0.626030 | 6.3:+59236316 | MS.gene33259:intron |
| CGAGTTTGAGAAGATGAAGG+CGG | 0.636955 | 6.3:+59235499 | MS.gene33259:CDS |
| AACACGACTATCTTCCCACC+AGG | 0.637312 | 6.3:-59235893 | None:intergenic |
| CGCCGGCTACGATCCACGTG+TGG | 0.642188 | 6.3:+59240335 | MS.gene33259:CDS |
| ATATATAAGACTGTAAGAGA+AGG | 0.650562 | 6.3:+59240492 | MS.gene33259:CDS |
| TAGACTTTAGGTGCCACACG+TGG | 0.667217 | 6.3:-59240348 | None:intergenic |
| AGAGATGGAGAAGAGTCTTG+GGG | 0.677872 | 6.3:+59235472 | MS.gene33259:CDS |
| CACACGTGGATCGTAGCCGG+CGG | 0.706408 | 6.3:-59240334 | None:intergenic |
| GTTTGGTGAAGAAAGTGGGA+AGG | 0.710512 | 6.3:+59235667 | MS.gene33259:CDS |
| AAGACTGTAAGAGAAGGACA+TGG | 0.732952 | 6.3:+59240498 | MS.gene33259:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTATTTATATTTATTA+TGG | + | chr6.3:59240222-59240241 | MS.gene33259:intron | 0.0% |
| !!! | AAAATGTACAAATTTAAAAT+TGG | - | chr6.3:59239684-59239703 | None:intergenic | 10.0% |
| !!! | AATTTTGATTTATCATATAT+TGG | + | chr6.3:59237694-59237713 | MS.gene33259:intron | 10.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | + | chr6.3:59238701-59238720 | MS.gene33259:intron | 15.0% |
| !! | AATAATAAGAATATTAGAGT+TGG | + | chr6.3:59235068-59235087 | MS.gene33259:CDS | 15.0% |
| !! | ATAACAATTATAAGTGTTTA+TGG | - | chr6.3:59237779-59237798 | None:intergenic | 15.0% |
| !! | ATATTGAAAAGAAGATTAAA+CGG | - | chr6.3:59239814-59239833 | None:intergenic | 15.0% |
| !! | TTGAGATAAATAAGAATATT+GGG | + | chr6.3:59235162-59235181 | MS.gene33259:CDS | 15.0% |
| !! | TTTATTAAGCAATATGAAAT+TGG | + | chr6.3:59237562-59237581 | MS.gene33259:intron | 15.0% |
| !!! | ATTGGAAATTTTATTTTAGT+TGG | + | chr6.3:59237580-59237599 | MS.gene33259:intron | 15.0% |
| !!! | ATTTTAATTATACACAAATG+TGG | + | chr6.3:59240185-59240204 | MS.gene33259:intron | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | - | chr6.3:59238702-59238721 | None:intergenic | 15.0% |
| !!! | TTGAAGTTAATAAGAATTTT+AGG | + | chr6.3:59235261-59235280 | MS.gene33259:CDS | 15.0% |
| !!! | TTTGAGATAAATAAGAATAT+TGG | + | chr6.3:59235161-59235180 | MS.gene33259:CDS | 15.0% |
| !!! | TTTGATTTGTTTAACTTATT+AGG | + | chr6.3:59235984-59236003 | MS.gene33259:intron | 15.0% |
| !!! | TTTTTATAACTGTGTATTTT+GGG | + | chr6.3:59235396-59235415 | MS.gene33259:CDS | 15.0% |
| !!! | TTTTTTATAATTTTTCAGGA+TGG | + | chr6.3:59240272-59240291 | MS.gene33259:intron | 15.0% |
| !! | AAATTCCAATTCGTATTTAT+AGG | - | chr6.3:59237679-59237698 | None:intergenic | 20.0% |
| !! | CAAATAAAGAAAGAAAACAT+TGG | - | chr6.3:59237458-59237477 | None:intergenic | 20.0% |
| !! | CACGTTAAATATTAAGATAA+GGG | + | chr6.3:59236591-59236610 | MS.gene33259:intron | 20.0% |
| !! | CCAAATTAATTCATTTGTAT+AGG | + | chr6.3:59239586-59239605 | MS.gene33259:intron | 20.0% |
| !! | CCTATACAAATGAATTAATT+TGG | - | chr6.3:59239589-59239608 | None:intergenic | 20.0% |
| !! | GAATGAAATTAATGCAAATA+TGG | - | chr6.3:59239434-59239453 | None:intergenic | 20.0% |
| !! | TCAAATAAGTTAATCCAAAT+AGG | - | chr6.3:59236010-59236029 | None:intergenic | 20.0% |
| !! | TGAGATAAATAAGAATATTG+GGG | + | chr6.3:59235163-59235182 | MS.gene33259:CDS | 20.0% |
| !! | TGGTATTCTTGTATAAATTA+AGG | - | chr6.3:59237637-59237656 | None:intergenic | 20.0% |
| !! | TTAAGCTATTTATTCAAACA+AGG | + | chr6.3:59236232-59236251 | MS.gene33259:intron | 20.0% |
| !!! | GGACTTTTATTAATTTTTGT+TGG | - | chr6.3:59237016-59237035 | None:intergenic | 20.0% |
| !!! | GTTTTTATAACTGTGTATTT+TGG | + | chr6.3:59235395-59235414 | MS.gene33259:CDS | 20.0% |
| ! | AACAGTGCAAATTATAAAAG+AGG | - | chr6.3:59237363-59237382 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr6.3:59237958-59237977 | None:intergenic | 25.0% |
| ! | AAGAGCAACAAAAATTCAAT+TGG | - | chr6.3:59236505-59236524 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | + | chr6.3:59238708-59238727 | MS.gene33259:intron | 25.0% |
| ! | AATTATAAGTGTTTATGGAG+AGG | - | chr6.3:59237774-59237793 | None:intergenic | 25.0% |
| ! | AATTCCAATCTATAAGAACA+AGG | - | chr6.3:59239146-59239165 | None:intergenic | 25.0% |
| ! | ACAAACCTATAAATACGAAT+TGG | + | chr6.3:59237671-59237690 | MS.gene33259:intron | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | + | chr6.3:59238709-59238728 | MS.gene33259:intron | 25.0% |
| ! | ATAAATAAGAATATTGGGGT+GGG | + | chr6.3:59235167-59235186 | MS.gene33259:CDS | 25.0% |
| ! | ATATATAAGACTGTAAGAGA+AGG | + | chr6.3:59240492-59240511 | MS.gene33259:CDS | 25.0% |
| ! | ATATCTAAACCATGTAACTT+GGG | + | chr6.3:59238439-59238458 | MS.gene33259:intron | 25.0% |
| ! | ATTATAAGTGTTTATGGAGA+GGG | - | chr6.3:59237773-59237792 | None:intergenic | 25.0% |
| ! | ATTCCAATCTATAAGAACAA+GGG | - | chr6.3:59239145-59239164 | None:intergenic | 25.0% |
| ! | ATTGGTTATAAAGAGAGAAA+AGG | - | chr6.3:59236487-59236506 | None:intergenic | 25.0% |
| ! | CAAACCAAACAAAAACAAAA+TGG | - | chr6.3:59237254-59237273 | None:intergenic | 25.0% |
| ! | GAAAAATTATGTGTTTGAGT+TGG | - | chr6.3:59236802-59236821 | None:intergenic | 25.0% |
| ! | GAAACAATATATGATATGTC+TGG | + | chr6.3:59236078-59236097 | MS.gene33259:intron | 25.0% |
| ! | GACTCATTTCATTGATATAT+AGG | + | chr6.3:59236536-59236555 | MS.gene33259:intron | 25.0% |
| ! | GCACGTTAAATATTAAGATA+AGG | + | chr6.3:59236590-59236609 | MS.gene33259:intron | 25.0% |
| ! | GTAAAGTAGTACAACTTAAT+GGG | - | chr6.3:59237806-59237825 | None:intergenic | 25.0% |
| ! | GTTCTTATAGATTGGAATTA+AGG | + | chr6.3:59239147-59239166 | MS.gene33259:intron | 25.0% |
| ! | TAACAGTAAAATTACTAGAG+AGG | - | chr6.3:59239383-59239402 | None:intergenic | 25.0% |
| ! | TAACCGTTTCTTAAAATCAA+GGG | + | chr6.3:59237042-59237061 | MS.gene33259:intron | 25.0% |
| ! | TAAGGGAAAAACATGAAATT+AGG | + | chr6.3:59236608-59236627 | MS.gene33259:intron | 25.0% |
| ! | TGCAAATATGGATGTAATTT+CGG | - | chr6.3:59239422-59239441 | None:intergenic | 25.0% |
| ! | TTACATGGTTTAGATATCTT+GGG | - | chr6.3:59238436-59238455 | None:intergenic | 25.0% |
| ! | TTTAGTGTAATTACAAGTGT+CGG | + | chr6.3:59239966-59239985 | MS.gene33259:intron | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | - | chr6.3:59239935-59239954 | None:intergenic | 25.0% |
| !! | CATTTACATTTGTTTCTTGT+TGG | + | chr6.3:59239765-59239784 | MS.gene33259:intron | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | + | chr6.3:59237975-59237994 | MS.gene33259:intron | 25.0% |
| !! | TCTTTCTTTATTTGTTGCTA+TGG | + | chr6.3:59237464-59237483 | MS.gene33259:intron | 25.0% |
| !! | TTTAACTTATTAGGCCTATT+TGG | + | chr6.3:59235993-59236012 | MS.gene33259:intron | 25.0% |
| !! | TTTAAGAAACGGTTACATTT+TGG | - | chr6.3:59237037-59237056 | None:intergenic | 25.0% |
| !!! | ATTTTAGGAGATTAGACAAA+AGG | + | chr6.3:59235234-59235253 | MS.gene33259:CDS | 25.0% |
| !!! | CATTTTGTTTTTGTTTGGTT+TGG | + | chr6.3:59237252-59237271 | MS.gene33259:intron | 25.0% |
| !!! | GTTTGTCATGGTATTTTTTA+TGG | - | chr6.3:59237657-59237676 | None:intergenic | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr6.3:59238100-59238119 | None:intergenic | 25.0% |
| !!! | TTCTCCATTTTGTTTTTGTT+TGG | + | chr6.3:59237247-59237266 | MS.gene33259:intron | 25.0% |
| !!! | TTTTAGGAGATTAGACAAAA+GGG | + | chr6.3:59235235-59235254 | MS.gene33259:CDS | 25.0% |
| AACCATAATGAGTCTGATTT+CGG | + | chr6.3:59239706-59239725 | MS.gene33259:intron | 30.0% | |
| AATTTGGTCTATCTCATACA+CGG | - | chr6.3:59239573-59239592 | None:intergenic | 30.0% | |
| AGAAGATGACAAAGAATATG+TGG | + | chr6.3:59236354-59236373 | MS.gene33259:CDS | 30.0% | |
| ATGAAGTTTAGCTGAATTAG+TGG | + | chr6.3:59236641-59236660 | MS.gene33259:intron | 30.0% | |
| ATTTGAATGTAGTATGAGCA+TGG | + | chr6.3:59236826-59236845 | MS.gene33259:intron | 30.0% | |
| CAACTGTTTGAGAGATATTA+CGG | + | chr6.3:59236056-59236075 | MS.gene33259:intron | 30.0% | |
| CTTAAGCGCTTATTTGATAA+AGG | + | chr6.3:59236189-59236208 | MS.gene33259:intron | 30.0% | |
| GAAATTGAAGCTGATTACAT+TGG | + | chr6.3:59240294-59240313 | MS.gene33259:CDS | 30.0% | |
| GAAGATGACAAAGAATATGT+GGG | + | chr6.3:59236355-59236374 | MS.gene33259:CDS | 30.0% | |
| GATAAATAAGAATATTGGGG+TGG | + | chr6.3:59235166-59235185 | MS.gene33259:CDS | 30.0% | |
| GATATCTAAACCATGTAACT+TGG | + | chr6.3:59238438-59238457 | MS.gene33259:intron | 30.0% | |
| GGTAAAGTAGTACAACTTAA+TGG | - | chr6.3:59237807-59237826 | None:intergenic | 30.0% | |
| GTAACCGTTTCTTAAAATCA+AGG | + | chr6.3:59237041-59237060 | MS.gene33259:intron | 30.0% | |
| GTTACATGGTTTAGATATCT+TGG | - | chr6.3:59238437-59238456 | None:intergenic | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | + | chr6.3:59237918-59237937 | MS.gene33259:intron | 30.0% | |
| TACACAAATGTGGTGAATTA+TGG | + | chr6.3:59240195-59240214 | MS.gene33259:intron | 30.0% | |
| TAGAAACAAGACGGAATATA+TGG | - | chr6.3:59238531-59238550 | None:intergenic | 30.0% | |
| TATCTAAACCATGTAACTTG+GGG | + | chr6.3:59238440-59238459 | MS.gene33259:intron | 30.0% | |
| TATTGTTATGGGAAAATCTC+CGG | + | chr6.3:59238751-59238770 | MS.gene33259:intron | 30.0% | |
| TCGTATTTATAGGTTTGTCA+TGG | - | chr6.3:59237669-59237688 | None:intergenic | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | - | chr6.3:59237911-59237930 | None:intergenic | 30.0% | |
| TGGAATGTAACTTCAGTAAA+AGG | - | chr6.3:59238511-59238530 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | - | chr6.3:59237914-59237933 | None:intergenic | 30.0% | |
| TTCCAATCTATAAGAACAAG+GGG | - | chr6.3:59239144-59239163 | None:intergenic | 30.0% | |
| TTTAGGAGATTAGACAAAAG+GGG | + | chr6.3:59235236-59235255 | MS.gene33259:CDS | 30.0% | |
| ! | AAAACATGGTTATGCCATTT+GGG | - | chr6.3:59237743-59237762 | None:intergenic | 30.0% |
| ! | AACTTTTCAACGAGATTATG+AGG | - | chr6.3:59239207-59239226 | None:intergenic | 30.0% |
| ! | AATAATTACCTTCTGGAGAA+AGG | - | chr6.3:59236461-59236480 | None:intergenic | 30.0% |
| ! | AATATTAGAGTTGGTTGTCA+AGG | + | chr6.3:59235077-59235096 | MS.gene33259:CDS | 30.0% |
| ! | ATAGGTAATGTTTGTTAGAC+AGG | + | chr6.3:59236554-59236573 | MS.gene33259:intron | 30.0% |
| ! | ATGAGGTTCTTGATGATAAA+TGG | + | chr6.3:59235750-59235769 | MS.gene33259:CDS | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr6.3:59237953-59237972 | MS.gene33259:intron | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | chr6.3:59238104-59238123 | MS.gene33259:intron | 30.0% |
| ! | TGAGGTTCTTGATGATAAAT+GGG | + | chr6.3:59235751-59235770 | MS.gene33259:CDS | 30.0% |
| ! | TTAAAATGCTGCACATTTTG+TGG | - | chr6.3:59235305-59235324 | None:intergenic | 30.0% |
| !! | AACTGTGTATTTTGGGAATA+TGG | + | chr6.3:59235403-59235422 | MS.gene33259:CDS | 30.0% |
| !! | AATGCATTGACTGAAAATGA+AGG | + | chr6.3:59235698-59235717 | MS.gene33259:CDS | 30.0% |
| !! | ATGCATTGACTGAAAATGAA+GGG | + | chr6.3:59235699-59235718 | MS.gene33259:CDS | 30.0% |
| !! | CAACCCTTGATTTTAAGAAA+CGG | - | chr6.3:59237048-59237067 | None:intergenic | 30.0% |
| !! | GCACTTAGTTTTCATTGATT+TGG | - | chr6.3:59238915-59238934 | None:intergenic | 30.0% |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | - | chr6.3:59238909-59238928 | None:intergenic | 30.0% |
| !!! | GCTTCATTTTAACTTCTTTC+TGG | + | chr6.3:59239843-59239862 | MS.gene33259:intron | 30.0% |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | - | chr6.3:59238690-59238709 | None:intergenic | 30.0% |
| AAAATGAAGGGAAAGTTGGA+GGG | + | chr6.3:59235711-59235730 | MS.gene33259:CDS | 35.0% | |
| AAACGCAACAAGAAACATGA+AGG | - | chr6.3:59237084-59237103 | None:intergenic | 35.0% | |
| AAATGTGTTCGCTTCGTATA+AGG | - | chr6.3:59235437-59235456 | None:intergenic | 35.0% | |
| AACTTCAGTAAAAGGAGAAG+TGG | - | chr6.3:59238503-59238522 | None:intergenic | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | + | chr6.3:59238302-59238321 | MS.gene33259:intron | 35.0% | |
| AAGAAAACGAGCAGAATTAC+TGG | + | chr6.3:59240437-59240456 | MS.gene33259:CDS | 35.0% | |
| AAGAAAAGAGACTCACGTTA+CGG | - | chr6.3:59239035-59239054 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+CGG | - | chr6.3:59238030-59238049 | None:intergenic | 35.0% | |
| AAGGAGGAATAATTACCTTC+TGG | - | chr6.3:59236468-59236487 | None:intergenic | 35.0% | |
| AAGTTATGGGAAAGGGTAAT+TGG | - | chr6.3:59239067-59239086 | None:intergenic | 35.0% | |
| AATCCTAGGCATGTTATGAT+TGG | + | chr6.3:59235353-59235372 | MS.gene33259:CDS | 35.0% | |
| ACAACATACCTATTGAAGTG+TGG | - | chr6.3:59239267-59239286 | None:intergenic | 35.0% | |
| ACAAGATTGCGCGAATTATA+GGG | - | chr6.3:59239116-59239135 | None:intergenic | 35.0% | |
| ACCTAAAGTCTACGAAAAGT+TGG | + | chr6.3:59240359-59240378 | MS.gene33259:CDS | 35.0% | |
| ACTGAAAATGAAGGGAAAGT+TGG | + | chr6.3:59235707-59235726 | MS.gene33259:CDS | 35.0% | |
| ACTTCAATAGGTATGTTGTC+CGG | + | chr6.3:59239268-59239287 | MS.gene33259:intron | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | - | chr6.3:59238502-59238521 | None:intergenic | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | - | chr6.3:59238163-59238182 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr6.3:59237946-59237965 | None:intergenic | 35.0% | |
| AGCAACTATTATTGGACATG+AGG | + | chr6.3:59235955-59235974 | MS.gene33259:CDS | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr6.3:59238111-59238130 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | - | chr6.3:59238298-59238317 | None:intergenic | 35.0% | |
| AGGAATAGAGCCAAATCATT+GGG | - | chr6.3:59236770-59236789 | None:intergenic | 35.0% | |
| AGTTATGGGAAAGGGTAATT+GGG | - | chr6.3:59239066-59239085 | None:intergenic | 35.0% | |
| ATACCATGAAGTTATGGGAA+AGG | - | chr6.3:59239075-59239094 | None:intergenic | 35.0% | |
| ATATCATACCCCAAGTTACA+TGG | - | chr6.3:59238451-59238470 | None:intergenic | 35.0% | |
| ATCTAAAAGCTTAGAATCGC+CGG | - | chr6.3:59240394-59240413 | None:intergenic | 35.0% | |
| ATTGAAGTGTGGAAAAGTCT+TGG | - | chr6.3:59239256-59239275 | None:intergenic | 35.0% | |
| CAAGAAACATGAAGGATGTA+TGG | - | chr6.3:59237076-59237095 | None:intergenic | 35.0% | |
| CAGTAAAATTACTAGAGAGG+AGG | - | chr6.3:59239380-59239399 | None:intergenic | 35.0% | |
| CCTAAAGTCTACGAAAAGTT+GGG | + | chr6.3:59240360-59240379 | MS.gene33259:CDS | 35.0% | |
| CTTCAATTCCTAAGAGGTTA+GGG | + | chr6.3:59235129-59235148 | MS.gene33259:CDS | 35.0% | |
| GAAAACATGGTTATGCCATT+TGG | - | chr6.3:59237744-59237763 | None:intergenic | 35.0% | |
| GAAAAGTTGGGAAAAATCTC+CGG | + | chr6.3:59240372-59240391 | MS.gene33259:CDS | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr6.3:59238086-59238105 | None:intergenic | 35.0% | |
| GAGTCATACCATGAAGTTAT+GGG | - | chr6.3:59239080-59239099 | None:intergenic | 35.0% | |
| GCAGAGATAGCAACTATTAT+TGG | + | chr6.3:59235947-59235966 | MS.gene33259:CDS | 35.0% | |
| GCTTCAGAAAATTCTGTGTT+TGG | + | chr6.3:59235650-59235669 | MS.gene33259:CDS | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | - | chr6.3:59238033-59238052 | None:intergenic | 35.0% | |
| GGTTATAAAGAGAGAAAAGG+AGG | - | chr6.3:59236484-59236503 | None:intergenic | 35.0% | |
| GTCAAGGTGGTAACTTTAAT+GGG | + | chr6.3:59235093-59235112 | MS.gene33259:CDS | 35.0% | |
| GTTCAGAAGAGTAGGAAAAA+GGG | + | chr6.3:59235773-59235792 | MS.gene33259:CDS | 35.0% | |
| TACAAGATTGCGCGAATTAT+AGG | - | chr6.3:59239117-59239136 | None:intergenic | 35.0% | |
| TACATCATCGTATTCAAGCT+GGG | - | chr6.3:59238376-59238395 | None:intergenic | 35.0% | |
| TACCATGAAGTTATGGGAAA+GGG | - | chr6.3:59239074-59239093 | None:intergenic | 35.0% | |
| TACTAGAGAATTCATGCATC+AGG | - | chr6.3:59237828-59237847 | None:intergenic | 35.0% | |
| TATGGATGTAATTTCGGAGT+AGG | - | chr6.3:59239416-59239435 | None:intergenic | 35.0% | |
| TCCAATCTATAAGAACAAGG+GGG | - | chr6.3:59239143-59239162 | None:intergenic | 35.0% | |
| TCTTCAATTCCTAAGAGGTT+AGG | + | chr6.3:59235128-59235147 | MS.gene33259:CDS | 35.0% | |
| TGAGTCATACCATGAAGTTA+TGG | - | chr6.3:59239081-59239100 | None:intergenic | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr6.3:59238091-59238110 | None:intergenic | 35.0% | |
| TGTCAAGGTGGTAACTTTAA+TGG | + | chr6.3:59235092-59235111 | MS.gene33259:CDS | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | + | chr6.3:59238034-59238053 | MS.gene33259:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | - | chr6.3:59238311-59238330 | None:intergenic | 35.0% |
| ! | AATTATTTTCTGCACAGACC+TGG | + | chr6.3:59236935-59236954 | MS.gene33259:intron | 35.0% |
| ! | AGAATTGGTTTCAGAATCCT+AGG | + | chr6.3:59235339-59235358 | MS.gene33259:CDS | 35.0% |
| ! | AGACTTTTCCACACTTCAAT+AGG | + | chr6.3:59239256-59239275 | MS.gene33259:intron | 35.0% |
| ! | ATAAATGGGTTCAGAAGAGT+AGG | + | chr6.3:59235765-59235784 | MS.gene33259:CDS | 35.0% |
| ! | ATTGAATTGGGAGATTTTGG+TGG | + | chr6.3:59235838-59235857 | MS.gene33259:CDS | 35.0% |
| ! | ATTTGTTTCTTGTTGGACTG+TGG | + | chr6.3:59239772-59239791 | MS.gene33259:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr6.3:59237934-59237953 | None:intergenic | 35.0% |
| ! | CGTCTGTTTCGAAGAATTTT+AGG | + | chr6.3:59235219-59235238 | MS.gene33259:CDS | 35.0% |
| ! | CGTTTTCTTCAATTCCTAAG+AGG | + | chr6.3:59235123-59235142 | MS.gene33259:CDS | 35.0% |
| ! | CTCTTGAGTTATCTCGTTTT+GGG | - | chr6.3:59236912-59236931 | None:intergenic | 35.0% |
| ! | GAAGTATTCATTAGCCCAAA+TGG | + | chr6.3:59237726-59237745 | MS.gene33259:intron | 35.0% |
| ! | GGAGATTTTCCCATAACAAT+AGG | - | chr6.3:59238752-59238771 | None:intergenic | 35.0% |
| ! | GGTTGGTTAGATAGTCAAAA+TGG | - | chr6.3:59240090-59240109 | None:intergenic | 35.0% |
| ! | TCTGCAAAAAGCATACATCT+CGG | + | chr6.3:59238644-59238663 | MS.gene33259:intron | 35.0% |
| ! | TGGATTGAATTGGGAGATTT+TGG | + | chr6.3:59235835-59235854 | MS.gene33259:CDS | 35.0% |
| ! | TGGTGTTGAAGGATTTCTTT+AGG | + | chr6.3:59240518-59240537 | MS.gene33259:CDS | 35.0% |
| !! | AAGCAAAAGGCATTAACCAT+AGG | - | chr6.3:59235872-59235891 | None:intergenic | 35.0% |
| !! | ATCCTGGATAGCTCTAATAT+AGG | + | chr6.3:59238820-59238839 | MS.gene33259:intron | 35.0% |
| !! | ATGTGTTTGAGTTGGTCTTA+AGG | - | chr6.3:59236794-59236813 | None:intergenic | 35.0% |
| !! | CCAAAGGTGTTAGCTTTAAT+GGG | + | chr6.3:59235192-59235211 | MS.gene33259:CDS | 35.0% |
| !! | CTATGTCATCGCTTTTGTTA+CGG | + | chr6.3:59236432-59236451 | MS.gene33259:CDS | 35.0% |
| !! | GACATAGTGTTGACAATATC+AGG | - | chr6.3:59236419-59236438 | None:intergenic | 35.0% |
| !! | GCATTTGGATGGATTGAATT+GGG | + | chr6.3:59235826-59235845 | MS.gene33259:CDS | 35.0% |
| !! | GGATTCTGAAACCAATTCTT+TGG | - | chr6.3:59235338-59235357 | None:intergenic | 35.0% |
| !! | TCCAAAGGTGTTAGCTTTAA+TGG | + | chr6.3:59235191-59235210 | MS.gene33259:CDS | 35.0% |
| !! | TTCTCCGTCATTTTGTACTA+TGG | + | chr6.3:59238409-59238428 | MS.gene33259:intron | 35.0% |
| !!! | AACCAATTTGGTTTTATGCC+TGG | - | chr6.3:59239010-59239029 | None:intergenic | 35.0% |
| !!! | ACCAATTTGGTTTTATGCCT+GGG | - | chr6.3:59239009-59239028 | None:intergenic | 35.0% |
| AAAGAGATGGAGAAGAGTCT+TGG | + | chr6.3:59235470-59235489 | MS.gene33259:CDS | 40.0% | |
| AAAGTAGCCATGTCAGAACA+TGG | - | chr6.3:59240111-59240130 | None:intergenic | 40.0% | |
| AAGACTGTAAGAGAAGGACA+TGG | + | chr6.3:59240498-59240517 | MS.gene33259:CDS | 40.0% | |
| AAGAGATGGAGAAGAGTCTT+GGG | + | chr6.3:59235471-59235490 | MS.gene33259:CDS | 40.0% | |
| ACACCAATCATAACATGCCT+AGG | - | chr6.3:59235359-59235378 | None:intergenic | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | - | chr6.3:59238136-59238155 | None:intergenic | 40.0% | |
| AGACTCTTCTCCATCTCTTT+CGG | - | chr6.3:59235470-59235489 | None:intergenic | 40.0% | |
| AGCTATCCAGGATATGTATG+AGG | - | chr6.3:59238813-59238832 | None:intergenic | 40.0% | |
| AGCTGAATTAGTGGAACTAG+AGG | + | chr6.3:59236650-59236669 | MS.gene33259:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr6.3:59238005-59238024 | None:intergenic | 40.0% | |
| AGTCATACCAAGTCCATACA+AGG | - | chr6.3:59236964-59236983 | None:intergenic | 40.0% | |
| AGTCTTAACACTTTGCTGCT+TGG | + | chr6.3:59236293-59236312 | MS.gene33259:intron | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | - | chr6.3:59238740-59238759 | None:intergenic | 40.0% | |
| ATAGAGCCAAATCATTGGGA+AGG | - | chr6.3:59236766-59236785 | None:intergenic | 40.0% | |
| ATCCTAACTCTCACACTTTC+AGG | - | chr6.3:59235557-59235576 | None:intergenic | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | + | chr6.3:59238472-59238491 | MS.gene33259:intron | 40.0% | |
| CAAGATTGCGCGAATTATAG+GGG | - | chr6.3:59239115-59239134 | None:intergenic | 40.0% | |
| CACGTTACGGATAACCAATT+TGG | - | chr6.3:59239022-59239041 | None:intergenic | 40.0% | |
| CAGGAATAGAGCCAAATCAT+TGG | - | chr6.3:59236771-59236790 | None:intergenic | 40.0% | |
| CCCATTAAAGCTAACACCTT+TGG | - | chr6.3:59235195-59235214 | None:intergenic | 40.0% | |
| CCTAAGAGGTTAGGGAAAAT+GGG | + | chr6.3:59235137-59235156 | MS.gene33259:CDS | 40.0% | |
| CTATCCAGGATATGTATGAG+GGG | - | chr6.3:59238811-59238830 | None:intergenic | 40.0% | |
| CTCCGAAATCAGACTCATTA+TGG | - | chr6.3:59239711-59239730 | None:intergenic | 40.0% | |
| GAAAAGGATGAGTAATGGCA+AGG | - | chr6.3:59239302-59239321 | None:intergenic | 40.0% | |
| GAAAATGAAGGGAAAGTTGG+AGG | + | chr6.3:59235710-59235729 | MS.gene33259:CDS | 40.0% | |
| GAAGATTAAACGGAAACCCT+AGG | - | chr6.3:59239804-59239823 | None:intergenic | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | - | chr6.3:59238137-59238156 | None:intergenic | 40.0% | |
| GCATGTTATGATTGGTGTAG+TGG | + | chr6.3:59235361-59235380 | MS.gene33259:CDS | 40.0% | |
| GCGTTGAAAAGGATGAGTAA+TGG | - | chr6.3:59239307-59239326 | None:intergenic | 40.0% | |
| GCTATCCAGGATATGTATGA+GGG | - | chr6.3:59238812-59238831 | None:intergenic | 40.0% | |
| GCTTTCCACAAAATCTCTCT+AGG | + | chr6.3:59238869-59238888 | MS.gene33259:intron | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | - | chr6.3:59238416-59238435 | None:intergenic | 40.0% | |
| GGTTCAGAAGAGTAGGAAAA+AGG | + | chr6.3:59235772-59235791 | MS.gene33259:CDS | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | - | chr6.3:59238377-59238396 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | - | chr6.3:59238169-59238188 | None:intergenic | 40.0% | |
| GTTATGATTGGTGTAGTGGT+AGG | + | chr6.3:59235365-59235384 | MS.gene33259:CDS | 40.0% | |
| TAACAATAGGACTGCACCAA+GGG | - | chr6.3:59238739-59238758 | None:intergenic | 40.0% | |
| TAACCAACCATGTTCTGACA+TGG | + | chr6.3:59240101-59240120 | MS.gene33259:intron | 40.0% | |
| TACCCTTTCCCATAACTTCA+TGG | + | chr6.3:59239069-59239088 | MS.gene33259:intron | 40.0% | |
| TAGAGCCAAATCATTGGGAA+GGG | - | chr6.3:59236765-59236784 | None:intergenic | 40.0% | |
| TAGCGAGTTTGAGAAGATGA+AGG | + | chr6.3:59235496-59235515 | MS.gene33259:CDS | 40.0% | |
| TATCCAGGATATGTATGAGG+GGG | - | chr6.3:59238810-59238829 | None:intergenic | 40.0% | |
| TATGAGGACGAAGAAAATGC+CGG | - | chr6.3:59239191-59239210 | None:intergenic | 40.0% | |
| TATTTCGCTACTCATCCATC+TGG | + | chr6.3:59240414-59240433 | MS.gene33259:CDS | 40.0% | |
| TCCCAGGCATAAAACCAAAT+TGG | + | chr6.3:59239005-59239024 | MS.gene33259:intron | 40.0% | |
| TCCCCCTTGTTCTTATAGAT+TGG | + | chr6.3:59239139-59239158 | MS.gene33259:intron | 40.0% | |
| TCCTAAGAGGTTAGGGAAAA+TGG | + | chr6.3:59235136-59235155 | MS.gene33259:CDS | 40.0% | |
| TCTACCTTAGAGGTGAAAGT+TGG | - | chr6.3:59238479-59238498 | None:intergenic | 40.0% | |
| TCTCTGATTCTGTTCAGTGT+TGG | + | chr6.3:59237511-59237530 | MS.gene33259:intron | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | - | chr6.3:59238138-59238157 | None:intergenic | 40.0% | |
| TGATGTTGATCTACGAAGCA+CGG | - | chr6.3:59240055-59240074 | None:intergenic | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | - | chr6.3:59238825-59238844 | None:intergenic | 40.0% | |
| TGGGAAGATAGTCGTGTTTA+CGG | + | chr6.3:59235898-59235917 | MS.gene33259:CDS | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | + | chr6.3:59238740-59238759 | MS.gene33259:intron | 40.0% | |
| TGTCTGTTCAGTGTGTTTGT+TGG | + | chr6.3:59237429-59237448 | MS.gene33259:intron | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | + | chr6.3:59238739-59238758 | MS.gene33259:intron | 40.0% | |
| ! | AGAGATTTTGTGGAAAGCCT+TGG | - | chr6.3:59238867-59238886 | None:intergenic | 40.0% |
| ! | ATCCTGAAAGTGTGAGAGTT+AGG | + | chr6.3:59235552-59235571 | MS.gene33259:CDS | 40.0% |
| ! | ATTAGAGTTGGTTGTCAAGG+TGG | + | chr6.3:59235080-59235099 | MS.gene33259:CDS | 40.0% |
| ! | CATAGTCAGAGGTGTAAACT+CGG | - | chr6.3:59236885-59236904 | None:intergenic | 40.0% |
| ! | CCCAACTTTTCGTAGACTTT+AGG | - | chr6.3:59240363-59240382 | None:intergenic | 40.0% |
| ! | CTGTGTTTGGTGAAGAAAGT+GGG | + | chr6.3:59235663-59235682 | MS.gene33259:CDS | 40.0% |
| ! | GAGTACCTAGAGAGATTTTG+TGG | - | chr6.3:59238877-59238896 | None:intergenic | 40.0% |
| ! | GCTCTTGAGTTATCTCGTTT+TGG | - | chr6.3:59236913-59236932 | None:intergenic | 40.0% |
| ! | GTTAATGCCTTTTGCTTACC+TGG | + | chr6.3:59235875-59235894 | MS.gene33259:CDS | 40.0% |
| ! | TCTGTGTTTGGTGAAGAAAG+TGG | + | chr6.3:59235662-59235681 | MS.gene33259:CDS | 40.0% |
| ! | TGCAGCATTTTAAGCCAAGA+GGG | + | chr6.3:59235312-59235331 | MS.gene33259:CDS | 40.0% |
| ! | TTTTGCCCTTCCCAATGATT+TGG | + | chr6.3:59236757-59236776 | MS.gene33259:intron | 40.0% |
| !! | AAGATGAAGGCGGGTTTTAA+GGG | + | chr6.3:59235509-59235528 | MS.gene33259:CDS | 40.0% |
| !! | AGGTGAAAGAAGCGTTGAAA+AGG | - | chr6.3:59239318-59239337 | None:intergenic | 40.0% |
| !! | ATGAAGCACTGATACAGACA+CGG | + | chr6.3:59239880-59239899 | MS.gene33259:intron | 40.0% |
| !! | ATTATCGAAGCGTTGAAGAG+AGG | + | chr6.3:59235590-59235609 | MS.gene33259:CDS | 40.0% |
| !! | ATTCCGTCTTGTTTCTACTC+AGG | + | chr6.3:59238534-59238553 | MS.gene33259:intron | 40.0% |
| !! | CGCATTTGGATGGATTGAAT+TGG | + | chr6.3:59235825-59235844 | MS.gene33259:CDS | 40.0% |
| !! | GATTTTGATGCCGAAAGAGA+TGG | + | chr6.3:59235457-59235476 | MS.gene33259:CDS | 40.0% |
| !! | TTATCGAAGCGTTGAAGAGA+GGG | + | chr6.3:59235591-59235610 | MS.gene33259:CDS | 40.0% |
| !! | TTGAGTTATCTCGTTTTGGG+AGG | - | chr6.3:59236909-59236928 | None:intergenic | 40.0% |
| !!! | AATTTGGTTTTATGCCTGGG+AGG | - | chr6.3:59239006-59239025 | None:intergenic | 40.0% |
| AACCAATTCTTTGGCCCTCT+TGG | - | chr6.3:59235329-59235348 | None:intergenic | 45.0% | |
| AACGCCTTATCCCACTAAGT+GGG | + | chr6.3:59237864-59237883 | MS.gene33259:intron | 45.0% | |
| AAGGGAAAGTTGGAGGGAAT+TGG | + | chr6.3:59235717-59235736 | MS.gene33259:CDS | 45.0% | |
| ACACTTTCAGGATGCATTGC+AGG | - | chr6.3:59235545-59235564 | None:intergenic | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | - | chr6.3:59238264-59238283 | None:intergenic | 45.0% | |
| AGAGATGGAGAAGAGTCTTG+GGG | + | chr6.3:59235472-59235491 | MS.gene33259:CDS | 45.0% | |
| AGTCTTGGCGATAGAGGAAT+TGG | - | chr6.3:59239241-59239260 | None:intergenic | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | - | chr6.3:59238373-59238392 | None:intergenic | 45.0% | |
| ATGAGTAATGGCAAGGCAGT+TGG | - | chr6.3:59239295-59239314 | None:intergenic | 45.0% | |
| ATTGGTGTAGTGGTAGGTTC+AGG | + | chr6.3:59235371-59235390 | MS.gene33259:CDS | 45.0% | |
| CATCAAGAACCTCATCTTCC+CGG | - | chr6.3:59235745-59235764 | None:intergenic | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | - | chr6.3:59238135-59238154 | None:intergenic | 45.0% | |
| CCATCCAAATGCGACGTATA+AGG | - | chr6.3:59235818-59235837 | None:intergenic | 45.0% | |
| CCGAAGATGATACACAGCAA+CGG | - | chr6.3:59237157-59237176 | None:intergenic | 45.0% | |
| CCGTTGCTGTGTATCATCTT+CGG | + | chr6.3:59237154-59237173 | MS.gene33259:intron | 45.0% | |
| CCTTATACGTCGCATTTGGA+TGG | + | chr6.3:59235815-59235834 | MS.gene33259:CDS | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | - | chr6.3:59238216-59238235 | None:intergenic | 45.0% | |
| CGAGTTTGAGAAGATGAAGG+CGG | + | chr6.3:59235499-59235518 | MS.gene33259:CDS | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | + | chr6.3:59238219-59238238 | MS.gene33259:intron | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | + | chr6.3:59238331-59238350 | MS.gene33259:intron | 45.0% | |
| CTTCTATTAGTTGCATCCGC+CGG | + | chr6.3:59240318-59240337 | MS.gene33259:CDS | 45.0% | |
| GAAAGCCTTGGAGAAGAAAG+GGG | - | chr6.3:59238855-59238874 | None:intergenic | 45.0% | |
| GAGTTTGAGAAGATGAAGGC+GGG | + | chr6.3:59235500-59235519 | MS.gene33259:CDS | 45.0% | |
| GCAACCTTATACGTCGCATT+TGG | + | chr6.3:59235811-59235830 | MS.gene33259:CDS | 45.0% | |
| GCTACACGACTCAACGTATA+GGG | - | chr6.3:59236729-59236748 | None:intergenic | 45.0% | |
| GGAAAGCCTTGGAGAAGAAA+GGG | - | chr6.3:59238856-59238875 | None:intergenic | 45.0% | |
| GGGAAGATAGTCGTGTTTAC+GGG | + | chr6.3:59235899-59235918 | MS.gene33259:CDS | 45.0% | |
| GGTTGAGTAAGGAGAATGTG+TGG | + | chr6.3:59235612-59235631 | MS.gene33259:CDS | 45.0% | |
| GGTTTGGACATGTAGAGAGA+AGG | - | chr6.3:59238070-59238089 | None:intergenic | 45.0% | |
| GTCTTGGCGATAGAGGAATT+GGG | - | chr6.3:59239240-59239259 | None:intergenic | 45.0% | |
| GTTGAAGAGAGGGTTGAGTA+AGG | + | chr6.3:59235601-59235620 | MS.gene33259:CDS | 45.0% | |
| TAGCCATGTCAGAACATGGT+TGG | - | chr6.3:59240107-59240126 | None:intergenic | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | + | chr6.3:59238260-59238279 | MS.gene33259:intron | 45.0% | |
| TGAGTAATGGCAAGGCAGTT+GGG | - | chr6.3:59239294-59239313 | None:intergenic | 45.0% | |
| TGCTACACGACTCAACGTAT+AGG | - | chr6.3:59236730-59236749 | None:intergenic | 45.0% | |
| TGGAAAAGTCTTGGCGATAG+AGG | - | chr6.3:59239247-59239266 | None:intergenic | 45.0% | |
| TGGAAAGCCTTGGAGAAGAA+AGG | - | chr6.3:59238857-59238876 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | - | chr6.3:59238256-59238275 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | chr6.3:59238364-59238383 | None:intergenic | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | - | chr6.3:59238350-59238369 | None:intergenic | 45.0% | |
| ! | AATATTGGGGTGGGTTCCAA+AGG | + | chr6.3:59235176-59235195 | MS.gene33259:CDS | 45.0% |
| ! | AATGCCTTTTGCTTACCTGG+TGG | + | chr6.3:59235878-59235897 | MS.gene33259:CDS | 45.0% |
| ! | AGAGAAGGACATGGTGTTGA+AGG | + | chr6.3:59240507-59240526 | MS.gene33259:CDS | 45.0% |
| ! | ATGCCTTTTGCTTACCTGGT+GGG | + | chr6.3:59235879-59235898 | MS.gene33259:CDS | 45.0% |
| ! | CACTTTGCTGCTTGGTGATT+AGG | + | chr6.3:59236301-59236320 | MS.gene33259:intron | 45.0% |
| ! | CCCATTTTCCCTAACCTCTT+AGG | - | chr6.3:59235140-59235159 | None:intergenic | 45.0% |
| ! | GCAGATGATGTAGTCTTGCT+TGG | - | chr6.3:59238629-59238648 | None:intergenic | 45.0% |
| ! | GTGCAGCATTTTAAGCCAAG+AGG | + | chr6.3:59235311-59235330 | MS.gene33259:CDS | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | chr6.3:59238255-59238274 | None:intergenic | 45.0% |
| ! | GTTTGGTGAAGAAAGTGGGA+AGG | + | chr6.3:59235667-59235686 | MS.gene33259:CDS | 45.0% |
| ! | TCTGCTCGTTTTCTTCCAGA+TGG | - | chr6.3:59240432-59240451 | None:intergenic | 45.0% |
| ! | TTGCTGCTTGGTGATTAGGT+TGG | + | chr6.3:59236305-59236324 | MS.gene33259:intron | 45.0% |
| ! | TTTTCTTGCGTTTGCGTGTC+AGG | + | chr6.3:59237222-59237241 | MS.gene33259:intron | 45.0% |
| !! | AGAATTACTGGCTCAAGCTC+AGG | + | chr6.3:59240449-59240468 | MS.gene33259:CDS | 45.0% |
| !! | GAAGATGAAGGCGGGTTTTA+AGG | + | chr6.3:59235508-59235527 | MS.gene33259:CDS | 45.0% |
| !! | GAGAGGGCATTACGAAAACA+TGG | - | chr6.3:59237757-59237776 | None:intergenic | 45.0% |
| !! | GTTTGAGTTGGTCTTAAGGC+AGG | - | chr6.3:59236790-59236809 | None:intergenic | 45.0% |
| !! | TACATCTCGGTGCTAACTCT+TGG | + | chr6.3:59238657-59238676 | MS.gene33259:intron | 45.0% |
| !! | TGATTAGGTTGGACATGCTG+TGG | + | chr6.3:59236316-59236335 | MS.gene33259:intron | 45.0% |
| !! | TGGACTGTGGATTAGTCCTA+GGG | + | chr6.3:59239785-59239804 | MS.gene33259:intron | 45.0% |
| !! | TTGGACTGTGGATTAGTCCT+AGG | + | chr6.3:59239784-59239803 | MS.gene33259:intron | 45.0% |
| !! | TTTGGTGGTGAAGGATCCTA+TGG | + | chr6.3:59235853-59235872 | MS.gene33259:CDS | 45.0% |
| !! | TTTTGGGAGGTCATAGTCAG+AGG | - | chr6.3:59236896-59236915 | None:intergenic | 45.0% |
| !!! | AGATGAAGGCGGGTTTTAAG+GGG | + | chr6.3:59235510-59235529 | MS.gene33259:CDS | 45.0% |
| !!! | TTGGGAGATTTTGGTGGTGA+AGG | + | chr6.3:59235844-59235863 | MS.gene33259:CDS | 45.0% |
| !! | GAAAAATTATAAAAAAAATA+GGG | - | chr6.3:59240268-59240287 | None:intergenic | 5.0% |
| !! | TGAAAAATTATAAAAAAAAT+AGG | - | chr6.3:59240269-59240288 | None:intergenic | 5.0% |
| !!! | TATTTTTTTTATAATTTTTC+AGG | + | chr6.3:59240268-59240287 | MS.gene33259:intron | 5.0% |
| AACACGACTATCTTCCCACC+AGG | - | chr6.3:59235896-59235915 | None:intergenic | 50.0% | |
| AAGCCCCCTCATACATATCC+TGG | + | chr6.3:59238804-59238823 | MS.gene33259:intron | 50.0% | |
| AAGGACTTAGGGTTGACCCT+TGG | + | chr6.3:59238720-59238739 | MS.gene33259:intron | 50.0% | |
| AAGTTGGAGGGAATTGGCAC+CGG | + | chr6.3:59235723-59235742 | MS.gene33259:CDS | 50.0% | |
| AATGCAACACTCAGCATGCC+AGG | - | chr6.3:59237188-59237207 | None:intergenic | 50.0% | |
| ACAGACCTGGATGCCTTGTA+TGG | + | chr6.3:59236948-59236967 | MS.gene33259:intron | 50.0% | |
| ACGCCTTATCCCACTAAGTG+GGG | + | chr6.3:59237865-59237884 | MS.gene33259:intron | 50.0% | |
| ACTGATACAGACACGGACAC+CGG | + | chr6.3:59239887-59239906 | MS.gene33259:intron | 50.0% | |
| AGCCAAGAGGGCCAAAGAAT+TGG | + | chr6.3:59235324-59235343 | MS.gene33259:CDS | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | - | chr6.3:59238188-59238207 | None:intergenic | 50.0% | |
| AGTCGAGGGAGGAGTTAAAC+GGG | - | chr6.3:59238604-59238623 | None:intergenic | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | + | chr6.3:59237863-59237882 | MS.gene33259:intron | 50.0% | |
| CATCTTCTCAGCACTGTGTC+TGG | - | chr6.3:59236342-59236361 | None:intergenic | 50.0% | |
| CCGCCTGAGTAGAAACAAGA+CGG | - | chr6.3:59238540-59238559 | None:intergenic | 50.0% | |
| CTACTTACTTCGACGCGTGA+TGG | - | chr6.3:59238966-59238985 | None:intergenic | 50.0% | |
| CTGGATGCCTTGTATGGACT+TGG | + | chr6.3:59236954-59236973 | MS.gene33259:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr6.3:59237869-59237888 | MS.gene33259:intron | 50.0% | |
| CTTCCCACCAGGTAAGCAAA+AGG | - | chr6.3:59235885-59235904 | None:intergenic | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | - | chr6.3:59238489-59238508 | None:intergenic | 50.0% | |
| GAGTCGAGGGAGGAGTTAAA+CGG | - | chr6.3:59238605-59238624 | None:intergenic | 50.0% | |
| GCGGAGAGTCAGGTTAAAAG+AGG | - | chr6.3:59238011-59238030 | None:intergenic | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | - | chr6.3:59238269-59238288 | None:intergenic | 50.0% | |
| TAAACGGGAGGCTAGAGACT+TGG | - | chr6.3:59238589-59238608 | None:intergenic | 50.0% | |
| TACGGCTACCTTTCTCCAGA+AGG | + | chr6.3:59236450-59236469 | MS.gene33259:CDS | 50.0% | |
| TCATCTTCGGCATTCCTTCC+TGG | + | chr6.3:59237167-59237186 | MS.gene33259:intron | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | + | chr6.3:59238043-59238062 | MS.gene33259:intron | 50.0% | |
| TTGGCGATAGAGGAATTGGG+TGG | - | chr6.3:59239237-59239256 | None:intergenic | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | chr6.3:59238208-59238227 | None:intergenic | 50.0% |
| ! | AGATCAAATGGCGGAGAGTC+AGG | - | chr6.3:59238021-59238040 | None:intergenic | 50.0% |
| ! | AGGCAAGCCTTAGAAGCGTA+CGG | - | chr6.3:59238566-59238585 | None:intergenic | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | - | chr6.3:59238618-59238637 | None:intergenic | 50.0% |
| ! | CAAGTCCATACAAGGCATCC+AGG | - | chr6.3:59236956-59236975 | None:intergenic | 50.0% |
| ! | TAGACTTTAGGTGCCACACG+TGG | - | chr6.3:59240351-59240370 | None:intergenic | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | - | chr6.3:59238619-59238638 | None:intergenic | 50.0% |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | + | chr6.3:59238537-59238556 | MS.gene33259:intron | 50.0% |
| !! | GTCAATGTCCGTGTCGTTTC+CGG | - | chr6.3:59239909-59239928 | None:intergenic | 50.0% |
| !! | TACAAGTGTCGGTGTCGTGT+CGG | + | chr6.3:59239977-59239996 | MS.gene33259:intron | 50.0% |
| ACAGCAACGGCATTGCACAC+AGG | - | chr6.3:59237144-59237163 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr6.3:59237877-59237896 | MS.gene33259:intron | 55.0% | |
| ACTAGTGTGAGGACGCAGGA+TGG | - | chr6.3:59238782-59238801 | None:intergenic | 55.0% | |
| AGGAAAAAGGGTCACGAGCG+TGG | + | chr6.3:59235785-59235804 | MS.gene33259:CDS | 55.0% | |
| AGTTGGAGGGAATTGGCACC+GGG | + | chr6.3:59235724-59235743 | MS.gene33259:CDS | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr6.3:59237878-59237897 | None:intergenic | 55.0% | |
| CAACACTCAGCATGCCAGGA+AGG | - | chr6.3:59237184-59237203 | None:intergenic | 55.0% | |
| CCTCACCCCTTTCTTCTCCA+AGG | + | chr6.3:59238847-59238866 | MS.gene33259:intron | 55.0% | |
| CCTTGGAGAAGAAAGGGGTG+AGG | - | chr6.3:59238850-59238869 | None:intergenic | 55.0% | |
| CGAAGAAAATGCCGGACGAG+TGG | - | chr6.3:59239183-59239202 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr6.3:59237871-59237890 | None:intergenic | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | - | chr6.3:59238196-59238215 | None:intergenic | 55.0% | |
| CTAGTGTGAGGACGCAGGAT+GGG | - | chr6.3:59238781-59238800 | None:intergenic | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | - | chr6.3:59238282-59238301 | None:intergenic | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | + | chr6.3:59238044-59238063 | MS.gene33259:intron | 55.0% | |
| GATTAGACGTGTCCCGGTGT+CGG | - | chr6.3:59240022-59240041 | None:intergenic | 55.0% | |
| GCGGAAACCGTACGCTTCTA+AGG | + | chr6.3:59238556-59238575 | MS.gene33259:intron | 55.0% | |
| GGAAAAAGGGTCACGAGCGT+GGG | + | chr6.3:59235786-59235805 | MS.gene33259:CDS | 55.0% | |
| GTGCTTCTTCTCCACTCGTC+CGG | + | chr6.3:59239169-59239188 | MS.gene33259:intron | 55.0% | |
| TAATGGCAAGGCAGTTGGGC+CGG | - | chr6.3:59239290-59239309 | None:intergenic | 55.0% | |
| TACGAAGCACGGACACTCCT+CGG | - | chr6.3:59240044-59240063 | None:intergenic | 55.0% | |
| TAGTGTGAGGACGCAGGATG+GGG | - | chr6.3:59238780-59238799 | None:intergenic | 55.0% | |
| TATGCCTGGGAGGTCGACTA+TGG | - | chr6.3:59238996-59239015 | None:intergenic | 55.0% | |
| TCACCTCGTGCTCCTGAATC+CGG | + | chr6.3:59239332-59239351 | MS.gene33259:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr6.3:59237877-59237896 | None:intergenic | 55.0% | |
| TTCGACTAGTGTGAGGACGC+AGG | - | chr6.3:59238786-59238805 | None:intergenic | 55.0% | |
| ! | ACTGGCTCAAGCTCAGGTGA+TGG | + | chr6.3:59240455-59240474 | MS.gene33259:CDS | 55.0% |
| ! | CGTGATGGAGCGATATCGGA+CGG | - | chr6.3:59238951-59238970 | None:intergenic | 55.0% |
| ! | GAATTGGCACCGGGAAGATG+AGG | + | chr6.3:59235733-59235752 | MS.gene33259:CDS | 55.0% |
| ! | GACGCGTGATGGAGCGATAT+CGG | - | chr6.3:59238955-59238974 | None:intergenic | 55.0% |
| ! | TCCTCGGATTAGACGTGTCC+CGG | - | chr6.3:59240028-59240047 | None:intergenic | 55.0% |
| ACACGACACGTGTCCGACAC+CGG | + | chr6.3:59240006-59240025 | MS.gene33259:intron | 60.0% | |
| ACCGGGACACGTCTAATCCG+AGG | + | chr6.3:59240024-59240043 | MS.gene33259:intron | 60.0% | |
| ACGGGAGGCTAGAGACTTGG+AGG | - | chr6.3:59238586-59238605 | None:intergenic | 60.0% | |
| AGGACGCAGGATGGGGATAC+CGG | - | chr6.3:59238773-59238792 | None:intergenic | 60.0% | |
| AGGGGGCTTCGACTAGTGTG+AGG | - | chr6.3:59238793-59238812 | None:intergenic | 60.0% | |
| CACGGACACCGGAAACGACA+CGG | + | chr6.3:59239898-59239917 | MS.gene33259:intron | 60.0% | |
| CGAGGGAGGAGTTAAACGGG+AGG | - | chr6.3:59238601-59238620 | None:intergenic | 60.0% | |
| GCTTCCATAGTCGACCTCCC+AGG | + | chr6.3:59238989-59239008 | MS.gene33259:intron | 60.0% | |
| TGCCACACGTGGATCGTAGC+CGG | - | chr6.3:59240340-59240359 | None:intergenic | 60.0% | |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | - | chr6.3:59238615-59238634 | None:intergenic | 60.0% |
| !! | TGTCGGTGTCGTGTCGGTGT+CGG | + | chr6.3:59239983-59240002 | MS.gene33259:intron | 60.0% |
| CACACGTGGATCGTAGCCGG+CGG | - | chr6.3:59240337-59240356 | None:intergenic | 65.0% | |
| CACGACACGTGTCCGACACC+GGG | + | chr6.3:59240007-59240026 | MS.gene33259:intron | 65.0% | |
| GAGAAGGCCCGTAGACGCCG+TGG | - | chr6.3:59238054-59238073 | None:intergenic | 70.0% | |
| ! | CGCCGGCTACGATCCACGTG+TGG | + | chr6.3:59240335-59240354 | MS.gene33259:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 59235056 | 59240539 | 59235056 | ID=MS.gene33259 |
| chr6.3 | mRNA | 59235056 | 59240539 | 59235056 | ID=MS.gene33259.t1;Parent=MS.gene33259 |
| chr6.3 | exon | 59235056 | 59235976 | 59235056 | ID=MS.gene33259.t1.exon1;Parent=MS.gene33259.t1 |
| chr6.3 | CDS | 59235056 | 59235976 | 59235056 | ID=cds.MS.gene33259.t1;Parent=MS.gene33259.t1 |
| chr6.3 | exon | 59236323 | 59236471 | 59236323 | ID=MS.gene33259.t1.exon2;Parent=MS.gene33259.t1 |
| chr6.3 | CDS | 59236323 | 59236471 | 59236323 | ID=cds.MS.gene33259.t1;Parent=MS.gene33259.t1 |
| chr6.3 | exon | 59240290 | 59240539 | 59240290 | ID=MS.gene33259.t1.exon3;Parent=MS.gene33259.t1 |
| chr6.3 | CDS | 59240290 | 59240539 | 59240290 | ID=cds.MS.gene33259.t1;Parent=MS.gene33259.t1 |
| Gene Sequence |
| Protein sequence |
