Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43886.t1 | XP_003613273.1 | 98.9 | 273 | 3 | 0 | 1 | 273 | 96 | 368 | 1.90E-154 | 555.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43886.t1 | Q8GW38 | 57.1 | 266 | 92 | 5 | 2 | 263 | 99 | 346 | 3.8e-71 | 269.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43886.t1 | G7K1H8 | 98.9 | 273 | 3 | 0 | 1 | 273 | 96 | 368 | 1.3e-154 | 555.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene43886 | 0.805194 | 1.50E-49 | -1.69E-46 |
| MS.gene049501 | MS.gene43886 | 0.832934 | 7.12E-56 | -1.69E-46 |
| MS.gene049647 | MS.gene43886 | 0.82014 | 8.03E-53 | -1.69E-46 |
| MS.gene050026 | MS.gene43886 | 0.815426 | 9.30E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene43886 | 0.800305 | 1.53E-48 | -1.69E-46 |
| MS.gene050227 | MS.gene43886 | 0.817376 | 3.41E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene43886 | 0.822601 | 2.17E-53 | -1.69E-46 |
| MS.gene050237 | MS.gene43886 | 0.808146 | 3.57E-50 | -1.69E-46 |
| MS.gene050438 | MS.gene43886 | 0.822014 | 2.97E-53 | -1.69E-46 |
| MS.gene050442 | MS.gene43886 | 0.805985 | 1.02E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene43886 | 0.853214 | 2.77E-61 | -1.69E-46 |
| MS.gene050721 | MS.gene43886 | 0.850293 | 1.86E-60 | -1.69E-46 |
| MS.gene050724 | MS.gene43886 | 0.845186 | 4.75E-59 | -1.69E-46 |
| MS.gene050780 | MS.gene43886 | 0.801714 | 7.91E-49 | -1.69E-46 |
| MS.gene050815 | MS.gene43886 | 0.814227 | 1.72E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene43886 | 0.828788 | 7.40E-55 | -1.69E-46 |
| MS.gene050953 | MS.gene43886 | 0.800573 | 1.35E-48 | -1.69E-46 |
| MS.gene051247 | MS.gene43886 | 0.833008 | 6.83E-56 | -1.69E-46 |
| MS.gene051265 | MS.gene43886 | 0.819105 | 1.38E-52 | -1.69E-46 |
| MS.gene051719 | MS.gene43886 | 0.813704 | 2.24E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene43886 | 0.801098 | 1.06E-48 | -1.69E-46 |
| MS.gene052012 | MS.gene43886 | 0.815345 | 9.69E-52 | -1.69E-46 |
| MS.gene052020 | MS.gene43886 | 0.817206 | 3.72E-52 | -1.69E-46 |
| MS.gene052190 | MS.gene43886 | 0.806096 | 9.71E-50 | -1.69E-46 |
| MS.gene052323 | MS.gene43886 | 0.80975 | 1.62E-50 | -1.69E-46 |
| MS.gene052358 | MS.gene43886 | -0.803384 | 3.58E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene43886 | 0.812022 | 5.23E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene43886 | 0.829414 | 5.22E-55 | -1.69E-46 |
| MS.gene052561 | MS.gene43886 | 0.83783 | 4.12E-57 | -1.69E-46 |
| MS.gene052611 | MS.gene43886 | 0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene052613 | MS.gene43886 | 0.814076 | 1.85E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene43886 | 0.806763 | 7.02E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene43886 | 0.808268 | 3.37E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene43886 | 0.818008 | 2.45E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene43886 | 0.843276 | 1.55E-58 | -1.69E-46 |
| MS.gene053054 | MS.gene43886 | -0.814115 | 1.82E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene43886 | 0.851827 | 6.89E-61 | -1.69E-46 |
| MS.gene053226 | MS.gene43886 | 0.808742 | 2.67E-50 | -1.69E-46 |
| MS.gene053883 | MS.gene43886 | 0.813531 | 2.44E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene43886 | 0.814925 | 1.20E-51 | -1.69E-46 |
| MS.gene054236 | MS.gene43886 | 0.80263 | 5.12E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene43886 | -0.802384 | 5.76E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene43886 | 0.805296 | 1.43E-49 | -1.69E-46 |
| MS.gene054472 | MS.gene43886 | 0.829196 | 5.89E-55 | -1.69E-46 |
| MS.gene054775 | MS.gene43886 | 0.802472 | 5.52E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene43886 | 0.815546 | 8.75E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene43886 | 0.816616 | 5.05E-52 | -1.69E-46 |
| MS.gene055468 | MS.gene43886 | 0.811953 | 5.41E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene43886 | 0.832832 | 7.55E-56 | -1.69E-46 |
| MS.gene055818 | MS.gene43886 | 0.827341 | 1.65E-54 | -1.69E-46 |
| MS.gene056173 | MS.gene43886 | 0.804979 | 1.67E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene43886 | 0.800513 | 1.39E-48 | -1.69E-46 |
| MS.gene056506 | MS.gene43886 | 0.820809 | 5.64E-53 | -1.69E-46 |
| MS.gene057060 | MS.gene43886 | 0.804199 | 2.42E-49 | -1.69E-46 |
| MS.gene057980 | MS.gene43886 | 0.814711 | 1.34E-51 | -1.69E-46 |
| MS.gene058037 | MS.gene43886 | 0.804349 | 2.25E-49 | -1.69E-46 |
| MS.gene058084 | MS.gene43886 | 0.828512 | 8.63E-55 | -1.69E-46 |
| MS.gene058625 | MS.gene43886 | 0.802632 | 5.12E-49 | -1.69E-46 |
| MS.gene058636 | MS.gene43886 | 0.827562 | 1.46E-54 | -1.69E-46 |
| MS.gene058829 | MS.gene43886 | 0.800485 | 1.41E-48 | -1.69E-46 |
| MS.gene058906 | MS.gene43886 | 0.820086 | 8.26E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene43886 | 0.813524 | 2.45E-51 | -1.69E-46 |
| MS.gene059249 | MS.gene43886 | 0.812842 | 3.46E-51 | -1.69E-46 |
| MS.gene05954 | MS.gene43886 | 0.838065 | 3.59E-57 | -1.69E-46 |
| MS.gene059789 | MS.gene43886 | 0.83702 | 6.65E-57 | -1.69E-46 |
| MS.gene059842 | MS.gene43886 | 0.802428 | 5.64E-49 | -1.69E-46 |
| MS.gene059937 | MS.gene43886 | 0.810984 | 8.78E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene43886 | 0.831673 | 1.46E-55 | -1.69E-46 |
| MS.gene060429 | MS.gene43886 | 0.814111 | 1.82E-51 | -1.69E-46 |
| MS.gene060572 | MS.gene43886 | 0.828812 | 7.30E-55 | -1.69E-46 |
| MS.gene060587 | MS.gene43886 | 0.816003 | 6.92E-52 | -1.69E-46 |
| MS.gene060907 | MS.gene43886 | 0.809159 | 2.17E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene43886 | -0.82631 | 2.91E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43886.t1 | MTR_5g034790 | 98.901 | 273 | 3 | 0 | 1 | 273 | 96 | 368 | 0.0 | 564 |
| MS.gene43886.t1 | MTR_8g063660 | 68.772 | 285 | 70 | 8 | 1 | 269 | 48 | 329 | 1.78e-125 | 360 |
| MS.gene43886.t1 | MTR_6g007737 | 57.471 | 261 | 97 | 6 | 1 | 254 | 113 | 366 | 4.39e-93 | 280 |
| MS.gene43886.t1 | MTR_4g106680 | 52.893 | 242 | 75 | 5 | 6 | 243 | 91 | 297 | 2.86e-74 | 229 |
| MS.gene43886.t1 | MTR_4g129420 | 39.937 | 318 | 112 | 12 | 1 | 246 | 97 | 407 | 5.93e-54 | 182 |
| MS.gene43886.t1 | MTR_3g100400 | 52.113 | 71 | 34 | 0 | 19 | 89 | 128 | 198 | 1.33e-22 | 96.3 |
| MS.gene43886.t1 | MTR_5g030010 | 31.839 | 223 | 131 | 6 | 11 | 212 | 112 | 334 | 5.06e-22 | 94.4 |
| MS.gene43886.t1 | MTR_5g064890 | 41.228 | 114 | 58 | 2 | 21 | 134 | 128 | 232 | 1.38e-21 | 92.8 |
| MS.gene43886.t1 | MTR_5g066250 | 51.948 | 77 | 34 | 1 | 16 | 89 | 126 | 202 | 4.47e-21 | 92.4 |
| MS.gene43886.t1 | MTR_7g073200 | 46.739 | 92 | 43 | 2 | 12 | 100 | 72 | 160 | 8.09e-21 | 87.4 |
| MS.gene43886.t1 | MTR_8g023400 | 46.835 | 79 | 41 | 1 | 14 | 92 | 85 | 162 | 9.11e-21 | 90.1 |
| MS.gene43886.t1 | MTR_8g089880 | 55.072 | 69 | 31 | 0 | 21 | 89 | 127 | 195 | 9.39e-21 | 89.4 |
| MS.gene43886.t1 | MTR_4g093830 | 50.633 | 79 | 39 | 0 | 14 | 92 | 119 | 197 | 1.46e-20 | 90.1 |
| MS.gene43886.t1 | MTR_1g074190 | 41.860 | 129 | 56 | 4 | 21 | 130 | 99 | 227 | 2.50e-20 | 89.4 |
| MS.gene43886.t1 | MTR_3g110190 | 50.704 | 71 | 35 | 0 | 19 | 89 | 64 | 134 | 2.92e-20 | 89.0 |
| MS.gene43886.t1 | MTR_3g094000 | 43.333 | 90 | 47 | 2 | 6 | 92 | 76 | 164 | 6.55e-20 | 84.7 |
| MS.gene43886.t1 | MTR_3g099650 | 44.872 | 78 | 40 | 1 | 21 | 95 | 107 | 184 | 9.01e-20 | 88.2 |
| MS.gene43886.t1 | MTR_2g009310 | 56.522 | 69 | 30 | 0 | 21 | 89 | 135 | 203 | 9.40e-20 | 88.2 |
| MS.gene43886.t1 | MTR_6g087150 | 47.945 | 73 | 38 | 0 | 20 | 92 | 92 | 164 | 1.49e-19 | 87.4 |
| MS.gene43886.t1 | MTR_8g066780 | 46.535 | 101 | 49 | 3 | 21 | 116 | 114 | 214 | 1.93e-19 | 87.0 |
| MS.gene43886.t1 | MTR_5g064990 | 49.333 | 75 | 35 | 1 | 21 | 92 | 114 | 188 | 3.48e-19 | 86.7 |
| MS.gene43886.t1 | MTR_6g055030 | 48.000 | 75 | 36 | 1 | 21 | 92 | 97 | 171 | 3.54e-19 | 85.9 |
| MS.gene43886.t1 | MTR_5g064980 | 41.121 | 107 | 54 | 2 | 16 | 113 | 103 | 209 | 4.24e-19 | 86.3 |
| MS.gene43886.t1 | MTR_3g091620 | 50.000 | 72 | 36 | 0 | 21 | 92 | 101 | 172 | 7.14e-19 | 85.5 |
| MS.gene43886.t1 | MTR_1g070140 | 48.718 | 78 | 39 | 1 | 16 | 92 | 98 | 175 | 7.97e-19 | 85.1 |
| MS.gene43886.t1 | MTR_1g100737 | 42.683 | 82 | 42 | 1 | 19 | 95 | 90 | 171 | 8.23e-19 | 82.4 |
| MS.gene43886.t1 | MTR_7g113800 | 46.835 | 79 | 37 | 2 | 21 | 95 | 91 | 168 | 1.13e-18 | 84.7 |
| MS.gene43886.t1 | MTR_1g043410 | 49.333 | 75 | 35 | 1 | 21 | 92 | 94 | 168 | 2.17e-18 | 83.6 |
| MS.gene43886.t1 | MTR_7g116180 | 50.000 | 76 | 35 | 1 | 21 | 93 | 67 | 142 | 2.27e-18 | 80.9 |
| MS.gene43886.t1 | MTR_3g078450 | 37.736 | 106 | 62 | 2 | 8 | 111 | 63 | 166 | 2.36e-18 | 81.6 |
| MS.gene43886.t1 | MTR_1g082550 | 48.101 | 79 | 36 | 2 | 21 | 95 | 98 | 175 | 3.03e-18 | 84.0 |
| MS.gene43886.t1 | MTR_7g116220 | 46.250 | 80 | 40 | 1 | 21 | 97 | 70 | 149 | 3.43e-18 | 80.5 |
| MS.gene43886.t1 | MTR_8g009190 | 33.540 | 161 | 73 | 4 | 25 | 182 | 80 | 209 | 3.87e-18 | 82.8 |
| MS.gene43886.t1 | MTR_1g070425 | 50.000 | 76 | 35 | 1 | 21 | 93 | 68 | 143 | 5.07e-18 | 79.7 |
| MS.gene43886.t1 | MTR_3g078470 | 30.435 | 161 | 96 | 4 | 8 | 160 | 63 | 215 | 7.16e-18 | 80.5 |
| MS.gene43886.t1 | MTR_4g030070 | 38.144 | 97 | 57 | 2 | 19 | 115 | 83 | 176 | 7.72e-18 | 80.5 |
| MS.gene43886.t1 | MTR_7g076250 | 34.513 | 113 | 69 | 3 | 19 | 129 | 61 | 170 | 2.08e-17 | 78.6 |
| MS.gene43886.t1 | MTR_7g117540 | 48.000 | 75 | 34 | 2 | 22 | 94 | 77 | 148 | 3.38e-17 | 79.7 |
| MS.gene43886.t1 | MTR_4g120270 | 40.594 | 101 | 56 | 2 | 21 | 121 | 80 | 176 | 4.34e-17 | 79.3 |
| MS.gene43886.t1 | MTR_2g090950 | 42.500 | 80 | 40 | 1 | 19 | 92 | 89 | 168 | 5.43e-17 | 78.6 |
| MS.gene43886.t1 | MTR_3g086730 | 34.416 | 154 | 83 | 6 | 22 | 162 | 47 | 195 | 5.80e-17 | 78.2 |
| MS.gene43886.t1 | MTR_3g086700 | 49.333 | 75 | 33 | 2 | 22 | 92 | 47 | 120 | 6.34e-17 | 77.0 |
| MS.gene43886.t1 | MTR_4g063070 | 42.553 | 94 | 43 | 2 | 7 | 89 | 285 | 378 | 7.23e-17 | 80.1 |
| MS.gene43886.t1 | MTR_2g044570 | 50.000 | 68 | 31 | 1 | 30 | 94 | 63 | 130 | 2.02e-16 | 77.8 |
| MS.gene43886.t1 | MTR_2g090905 | 38.889 | 90 | 37 | 2 | 13 | 90 | 31 | 114 | 2.02e-16 | 74.3 |
| MS.gene43886.t1 | MTR_2g096350 | 46.250 | 80 | 41 | 1 | 16 | 93 | 102 | 181 | 4.04e-16 | 75.5 |
| MS.gene43886.t1 | MTR_2g055790 | 40.449 | 89 | 50 | 2 | 4 | 92 | 60 | 145 | 4.06e-16 | 75.1 |
| MS.gene43886.t1 | MTR_5g024730 | 44.872 | 78 | 41 | 1 | 17 | 92 | 73 | 150 | 4.80e-16 | 75.5 |
| MS.gene43886.t1 | MTR_3g464780 | 41.772 | 79 | 42 | 1 | 18 | 92 | 99 | 177 | 6.21e-16 | 75.9 |
| MS.gene43886.t1 | MTR_2g035800 | 46.053 | 76 | 41 | 0 | 19 | 94 | 74 | 149 | 1.03e-15 | 73.2 |
| MS.gene43886.t1 | MTR_1g492830 | 42.466 | 73 | 41 | 1 | 21 | 92 | 61 | 133 | 1.81e-15 | 73.9 |
| MS.gene43886.t1 | MTR_7g116200 | 48.571 | 70 | 35 | 1 | 21 | 90 | 68 | 136 | 2.68e-15 | 72.4 |
| MS.gene43886.t1 | MTR_3g114500 | 43.038 | 79 | 42 | 1 | 19 | 97 | 46 | 121 | 2.93e-15 | 70.9 |
| MS.gene43886.t1 | MTR_3g071300 | 40.404 | 99 | 54 | 2 | 21 | 115 | 76 | 173 | 3.26e-15 | 72.0 |
| MS.gene43886.t1 | MTR_8g099495 | 48.611 | 72 | 35 | 1 | 21 | 90 | 319 | 390 | 3.76e-15 | 75.1 |
| MS.gene43886.t1 | MTR_4g056590 | 43.421 | 76 | 40 | 2 | 21 | 96 | 100 | 172 | 4.21e-15 | 72.4 |
| MS.gene43886.t1 | MTR_6g007680 | 44.595 | 74 | 41 | 0 | 22 | 95 | 41 | 114 | 5.72e-15 | 70.9 |
| MS.gene43886.t1 | MTR_8g028465 | 43.662 | 71 | 38 | 1 | 21 | 91 | 90 | 158 | 6.59e-15 | 72.0 |
| MS.gene43886.t1 | MTR_3g116000 | 45.333 | 75 | 40 | 1 | 19 | 93 | 77 | 150 | 8.83e-15 | 71.2 |
| MS.gene43886.t1 | MTR_2g436100 | 46.377 | 69 | 37 | 0 | 21 | 89 | 93 | 161 | 8.85e-15 | 73.2 |
| MS.gene43886.t1 | MTR_8g027980 | 34.839 | 155 | 83 | 6 | 24 | 160 | 93 | 247 | 9.19e-15 | 72.8 |
| MS.gene43886.t1 | MTR_8g073120 | 42.466 | 73 | 40 | 1 | 19 | 89 | 68 | 140 | 1.02e-14 | 71.6 |
| MS.gene43886.t1 | MTR_3g095560 | 50.000 | 68 | 26 | 1 | 46 | 105 | 135 | 202 | 1.19e-14 | 72.0 |
| MS.gene43886.t1 | MTR_7g096690 | 40.789 | 76 | 41 | 1 | 21 | 92 | 70 | 145 | 1.49e-14 | 72.8 |
| MS.gene43886.t1 | MTR_4g094725 | 44.595 | 74 | 39 | 1 | 19 | 90 | 76 | 149 | 1.50e-14 | 69.7 |
| MS.gene43886.t1 | MTR_3g012550 | 39.726 | 73 | 42 | 1 | 21 | 91 | 80 | 152 | 2.49e-14 | 69.7 |
| MS.gene43886.t1 | MTR_7g116210 | 47.143 | 70 | 36 | 1 | 21 | 90 | 10 | 78 | 2.67e-14 | 68.2 |
| MS.gene43886.t1 | MTR_5g076990 | 42.105 | 76 | 40 | 1 | 21 | 92 | 76 | 151 | 2.74e-14 | 72.0 |
| MS.gene43886.t1 | MTR_7g108855 | 45.714 | 70 | 36 | 1 | 22 | 89 | 67 | 136 | 3.66e-14 | 69.7 |
| MS.gene43886.t1 | MTR_8g092840 | 43.038 | 79 | 40 | 2 | 17 | 92 | 109 | 185 | 4.13e-14 | 70.1 |
| MS.gene43886.t1 | MTR_8g092960 | 42.857 | 77 | 39 | 2 | 19 | 92 | 101 | 175 | 4.24e-14 | 70.1 |
| MS.gene43886.t1 | MTR_8g032690 | 44.118 | 68 | 37 | 1 | 47 | 113 | 19 | 86 | 5.96e-14 | 67.0 |
| MS.gene43886.t1 | MTR_3g078120 | 48.529 | 68 | 33 | 1 | 30 | 95 | 66 | 133 | 7.28e-14 | 67.8 |
| MS.gene43886.t1 | MTR_7g079280 | 39.726 | 73 | 42 | 1 | 21 | 91 | 80 | 152 | 7.31e-14 | 68.6 |
| MS.gene43886.t1 | MTR_8g092990 | 59.574 | 47 | 19 | 0 | 46 | 92 | 140 | 186 | 9.34e-14 | 69.3 |
| MS.gene43886.t1 | MTR_8g092930 | 44.000 | 75 | 37 | 2 | 21 | 92 | 112 | 184 | 9.36e-14 | 69.3 |
| MS.gene43886.t1 | MTR_1g056350 | 33.645 | 107 | 64 | 2 | 11 | 112 | 64 | 168 | 1.11e-13 | 67.8 |
| MS.gene43886.t1 | MTR_8g092970 | 59.574 | 47 | 19 | 0 | 46 | 92 | 130 | 176 | 1.22e-13 | 68.6 |
| MS.gene43886.t1 | MTR_8g092985 | 42.308 | 78 | 40 | 2 | 19 | 93 | 109 | 184 | 1.23e-13 | 68.6 |
| MS.gene43886.t1 | MTR_7g079290 | 38.158 | 76 | 43 | 2 | 21 | 92 | 125 | 200 | 2.37e-13 | 67.8 |
| MS.gene43886.t1 | MTR_6g055030 | 60.000 | 50 | 19 | 1 | 44 | 92 | 91 | 140 | 3.77e-13 | 68.2 |
| MS.gene43886.t1 | MTR_3g091200 | 39.189 | 74 | 43 | 1 | 20 | 91 | 302 | 375 | 3.77e-13 | 68.9 |
| MS.gene43886.t1 | MTR_5g082940 | 39.189 | 74 | 43 | 1 | 21 | 92 | 75 | 148 | 3.79e-13 | 66.2 |
| MS.gene43886.t1 | MTR_5g026730 | 57.778 | 45 | 19 | 0 | 47 | 91 | 94 | 138 | 5.93e-13 | 65.9 |
| MS.gene43886.t1 | MTR_8g093010 | 40.260 | 77 | 41 | 2 | 19 | 92 | 105 | 179 | 8.02e-13 | 66.6 |
| MS.gene43886.t1 | MTR_8g099515 | 44.048 | 84 | 42 | 2 | 21 | 99 | 309 | 392 | 1.46e-12 | 67.4 |
| MS.gene43886.t1 | MTR_8g071815 | 58.140 | 43 | 18 | 0 | 47 | 89 | 90 | 132 | 1.68e-12 | 64.7 |
| MS.gene43886.t1 | MTR_8g074900 | 35.484 | 93 | 55 | 2 | 1 | 92 | 137 | 225 | 1.71e-12 | 65.5 |
| MS.gene43886.t1 | MTR_5g009200 | 44.444 | 72 | 38 | 1 | 21 | 90 | 322 | 393 | 2.31e-12 | 66.6 |
| MS.gene43886.t1 | MTR_5g009210 | 44.444 | 72 | 38 | 1 | 21 | 90 | 287 | 358 | 3.12e-12 | 66.2 |
| MS.gene43886.t1 | MTR_8g066740 | 38.158 | 76 | 43 | 1 | 21 | 92 | 76 | 151 | 3.71e-12 | 65.9 |
| MS.gene43886.t1 | MTR_5g009190 | 43.056 | 72 | 39 | 1 | 21 | 90 | 266 | 337 | 3.75e-12 | 65.9 |
| MS.gene43886.t1 | MTR_5g092790 | 35.870 | 92 | 56 | 2 | 2 | 90 | 137 | 228 | 4.18e-12 | 64.7 |
| MS.gene43886.t1 | MTR_3g081030 | 41.026 | 78 | 45 | 1 | 22 | 99 | 95 | 171 | 5.73e-12 | 63.9 |
| MS.gene43886.t1 | MTR_5g022920 | 52.000 | 50 | 24 | 0 | 43 | 92 | 185 | 234 | 5.91e-12 | 64.3 |
| MS.gene43886.t1 | MTR_5g092750 | 33.696 | 92 | 58 | 2 | 2 | 90 | 137 | 228 | 8.26e-12 | 63.9 |
| MS.gene43886.t1 | MTR_5g026720 | 53.333 | 45 | 21 | 0 | 47 | 91 | 93 | 137 | 1.27e-11 | 62.0 |
| MS.gene43886.t1 | MTR_5g071930 | 36.000 | 75 | 45 | 1 | 21 | 95 | 66 | 137 | 1.36e-11 | 62.8 |
| MS.gene43886.t1 | MTR_8g028815 | 46.774 | 62 | 32 | 1 | 30 | 90 | 75 | 136 | 1.76e-11 | 61.6 |
| MS.gene43886.t1 | MTR_4g077570 | 49.020 | 51 | 22 | 2 | 42 | 89 | 6 | 55 | 1.91e-11 | 59.3 |
| MS.gene43886.t1 | MTR_1g090480 | 36.000 | 75 | 44 | 1 | 21 | 91 | 72 | 146 | 2.26e-11 | 61.2 |
| MS.gene43886.t1 | MTR_5g026260 | 42.424 | 66 | 35 | 3 | 26 | 89 | 483 | 547 | 2.27e-11 | 64.3 |
| MS.gene43886.t1 | MTR_5g010100 | 50.000 | 50 | 24 | 1 | 47 | 95 | 81 | 130 | 3.03e-11 | 60.1 |
| MS.gene43886.t1 | MTR_6g007670 | 42.254 | 71 | 40 | 1 | 27 | 96 | 151 | 221 | 4.81e-11 | 62.0 |
| MS.gene43886.t1 | MTR_6g007670 | 50.000 | 52 | 26 | 0 | 45 | 96 | 31 | 82 | 5.39e-11 | 61.6 |
| MS.gene43886.t1 | MTR_1g026070 | 37.975 | 79 | 46 | 1 | 19 | 97 | 46 | 121 | 5.24e-11 | 59.7 |
| MS.gene43886.t1 | MTR_4g022410 | 49.180 | 61 | 30 | 1 | 33 | 92 | 98 | 158 | 5.92e-11 | 60.5 |
| MS.gene43886.t1 | MTR_8g098770 | 45.312 | 64 | 32 | 2 | 28 | 90 | 69 | 130 | 6.46e-11 | 60.1 |
| MS.gene43886.t1 | MTR_1g090460 | 39.706 | 68 | 35 | 2 | 28 | 90 | 72 | 138 | 8.51e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43886.t1 | AT1G23980 | 61.660 | 253 | 73 | 6 | 1 | 248 | 98 | 331 | 1.97e-90 | 273 |
| MS.gene43886.t1 | AT5G40250 | 50.171 | 293 | 114 | 8 | 1 | 271 | 87 | 369 | 6.49e-85 | 259 |
| MS.gene43886.t1 | AT2G18650 | 43.636 | 275 | 117 | 11 | 6 | 246 | 84 | 354 | 1.92e-55 | 184 |
| MS.gene43886.t1 | AT3G48030 | 48.421 | 190 | 86 | 3 | 10 | 198 | 91 | 269 | 7.19e-54 | 176 |
| MS.gene43886.t1 | AT3G48030 | 48.421 | 190 | 86 | 3 | 10 | 198 | 169 | 347 | 3.51e-53 | 176 |
| MS.gene43886.t1 | AT4G30400 | 40.067 | 297 | 119 | 10 | 6 | 244 | 92 | 387 | 8.30e-52 | 176 |
| MS.gene43886.t1 | AT5G57750 | 62.500 | 88 | 32 | 1 | 4 | 90 | 78 | 165 | 4.81e-34 | 123 |
| MS.gene43886.t1 | AT5G05810 | 44.330 | 97 | 52 | 1 | 19 | 113 | 118 | 214 | 1.89e-22 | 95.9 |
| MS.gene43886.t1 | AT3G03550 | 52.564 | 78 | 37 | 0 | 12 | 89 | 124 | 201 | 2.07e-22 | 95.5 |
| MS.gene43886.t1 | AT2G20030 | 50.000 | 86 | 41 | 1 | 7 | 90 | 82 | 167 | 2.99e-22 | 95.1 |
| MS.gene43886.t1 | AT1G72220 | 57.534 | 73 | 31 | 0 | 17 | 89 | 147 | 219 | 4.40e-22 | 95.1 |
| MS.gene43886.t1 | AT4G09110 | 31.515 | 165 | 102 | 3 | 21 | 174 | 94 | 258 | 1.37e-21 | 92.4 |
| MS.gene43886.t1 | AT4G40070 | 38.686 | 137 | 67 | 5 | 21 | 149 | 95 | 222 | 1.49e-21 | 92.4 |
| MS.gene43886.t1 | AT5G17600 | 51.948 | 77 | 37 | 0 | 13 | 89 | 108 | 184 | 2.26e-21 | 92.4 |
| MS.gene43886.t1 | AT1G53820 | 47.436 | 78 | 40 | 1 | 17 | 94 | 91 | 167 | 5.58e-21 | 90.9 |
| MS.gene43886.t1 | AT1G35330 | 43.299 | 97 | 51 | 2 | 21 | 114 | 100 | 195 | 1.46e-20 | 89.7 |
| MS.gene43886.t1 | AT4G28890 | 50.685 | 73 | 36 | 0 | 20 | 92 | 96 | 168 | 1.83e-20 | 90.5 |
| MS.gene43886.t1 | AT3G60220 | 32.335 | 167 | 81 | 5 | 25 | 188 | 92 | 229 | 2.22e-20 | 89.4 |
| MS.gene43886.t1 | AT2G34990 | 35.172 | 145 | 82 | 4 | 21 | 160 | 67 | 204 | 5.02e-20 | 87.8 |
| MS.gene43886.t1 | AT3G16720 | 51.351 | 74 | 35 | 1 | 21 | 94 | 94 | 166 | 7.11e-20 | 87.4 |
| MS.gene43886.t1 | AT2G34990 | 35.172 | 145 | 82 | 4 | 21 | 160 | 89 | 226 | 7.32e-20 | 87.8 |
| MS.gene43886.t1 | AT2G47560 | 51.316 | 76 | 35 | 1 | 19 | 92 | 78 | 153 | 1.31e-19 | 85.5 |
| MS.gene43886.t1 | AT2G35000 | 42.553 | 94 | 50 | 2 | 2 | 92 | 88 | 180 | 1.60e-19 | 87.4 |
| MS.gene43886.t1 | AT3G10910 | 40.000 | 100 | 54 | 1 | 20 | 119 | 87 | 180 | 3.23e-19 | 83.2 |
| MS.gene43886.t1 | AT4G33565 | 42.697 | 89 | 51 | 0 | 12 | 100 | 182 | 270 | 4.75e-19 | 85.9 |
| MS.gene43886.t1 | AT4G09120 | 48.000 | 75 | 36 | 1 | 21 | 92 | 94 | 168 | 7.19e-19 | 85.5 |
| MS.gene43886.t1 | AT5G10380 | 45.570 | 79 | 43 | 0 | 11 | 89 | 99 | 177 | 1.65e-18 | 83.6 |
| MS.gene43886.t1 | AT4G09130 | 45.333 | 75 | 38 | 1 | 21 | 92 | 91 | 165 | 2.12e-18 | 84.0 |
| MS.gene43886.t1 | AT2G42350 | 47.945 | 73 | 31 | 2 | 21 | 90 | 75 | 143 | 2.12e-18 | 82.0 |
| MS.gene43886.t1 | AT1G72310 | 42.857 | 77 | 43 | 1 | 17 | 93 | 98 | 173 | 2.70e-18 | 83.6 |
| MS.gene43886.t1 | AT1G04360 | 45.556 | 90 | 41 | 3 | 19 | 100 | 99 | 188 | 3.70e-18 | 83.6 |
| MS.gene43886.t1 | AT1G22500 | 46.753 | 77 | 38 | 1 | 19 | 92 | 87 | 163 | 6.07e-18 | 83.2 |
| MS.gene43886.t1 | AT5G43420 | 41.111 | 90 | 39 | 1 | 17 | 92 | 94 | 183 | 6.18e-18 | 82.8 |
| MS.gene43886.t1 | AT4G15975 | 44.444 | 72 | 39 | 1 | 21 | 92 | 51 | 121 | 7.57e-18 | 80.9 |
| MS.gene43886.t1 | AT1G72200 | 48.000 | 75 | 36 | 1 | 21 | 92 | 115 | 189 | 1.41e-17 | 82.0 |
| MS.gene43886.t1 | AT5G01880 | 46.575 | 73 | 39 | 0 | 20 | 92 | 78 | 150 | 1.42e-17 | 78.2 |
| MS.gene43886.t1 | AT5G27420 | 45.570 | 79 | 38 | 2 | 21 | 95 | 95 | 172 | 2.20e-17 | 81.3 |
| MS.gene43886.t1 | AT3G05200 | 38.542 | 96 | 54 | 2 | 4 | 95 | 82 | 176 | 2.87e-17 | 81.3 |
| MS.gene43886.t1 | AT2G42360 | 43.750 | 80 | 44 | 1 | 12 | 90 | 72 | 151 | 2.96e-17 | 79.3 |
| MS.gene43886.t1 | AT5G05280 | 45.205 | 73 | 39 | 1 | 21 | 93 | 88 | 159 | 3.03e-17 | 77.8 |
| MS.gene43886.t1 | AT3G18930 | 46.341 | 82 | 34 | 1 | 21 | 92 | 120 | 201 | 4.84e-17 | 80.5 |
| MS.gene43886.t1 | AT3G18930 | 46.341 | 82 | 34 | 1 | 21 | 92 | 120 | 201 | 4.84e-17 | 80.5 |
| MS.gene43886.t1 | AT3G18930 | 46.341 | 82 | 34 | 1 | 21 | 92 | 120 | 201 | 4.84e-17 | 80.5 |
| MS.gene43886.t1 | AT3G62690 | 42.169 | 83 | 48 | 0 | 22 | 104 | 88 | 170 | 6.20e-17 | 78.6 |
| MS.gene43886.t1 | AT4G10150 | 45.833 | 72 | 38 | 1 | 21 | 92 | 86 | 156 | 2.63e-16 | 76.6 |
| MS.gene43886.t1 | AT1G76410 | 47.368 | 76 | 39 | 1 | 19 | 93 | 75 | 150 | 3.06e-16 | 75.1 |
| MS.gene43886.t1 | AT3G61550 | 37.931 | 87 | 43 | 1 | 16 | 91 | 94 | 180 | 3.89e-16 | 75.5 |
| MS.gene43886.t1 | AT4G09100 | 46.575 | 73 | 34 | 2 | 21 | 89 | 56 | 127 | 6.30e-16 | 73.2 |
| MS.gene43886.t1 | AT1G20823 | 46.053 | 76 | 40 | 1 | 19 | 93 | 82 | 157 | 6.64e-16 | 74.7 |
| MS.gene43886.t1 | AT2G35910 | 42.308 | 78 | 45 | 0 | 21 | 98 | 121 | 198 | 9.72e-16 | 74.7 |
| MS.gene43886.t1 | AT4G10160 | 41.333 | 75 | 43 | 1 | 21 | 95 | 72 | 145 | 2.03e-15 | 73.9 |
| MS.gene43886.t1 | AT2G27940 | 42.667 | 75 | 41 | 2 | 21 | 94 | 115 | 188 | 2.23e-15 | 73.9 |
| MS.gene43886.t1 | AT2G46160 | 40.506 | 79 | 39 | 1 | 21 | 91 | 104 | 182 | 2.45e-15 | 73.6 |
| MS.gene43886.t1 | AT2G46160 | 40.506 | 79 | 39 | 1 | 21 | 91 | 104 | 182 | 2.45e-15 | 73.6 |
| MS.gene43886.t1 | AT4G17905 | 51.389 | 72 | 33 | 2 | 20 | 89 | 126 | 197 | 3.22e-15 | 74.7 |
| MS.gene43886.t1 | AT4G17905 | 51.389 | 72 | 33 | 2 | 20 | 89 | 152 | 223 | 5.67e-15 | 74.3 |
| MS.gene43886.t1 | AT5G07040 | 38.356 | 73 | 43 | 1 | 21 | 91 | 66 | 138 | 6.40e-15 | 70.9 |
| MS.gene43886.t1 | AT1G33480 | 41.667 | 72 | 41 | 1 | 21 | 92 | 75 | 145 | 1.86e-14 | 71.6 |
| MS.gene43886.t1 | AT2G35420 | 30.818 | 159 | 100 | 4 | 19 | 175 | 75 | 225 | 2.30e-14 | 71.6 |
| MS.gene43886.t1 | AT5G46650 | 41.758 | 91 | 46 | 3 | 6 | 92 | 73 | 160 | 3.70e-14 | 71.2 |
| MS.gene43886.t1 | AT4G35480 | 56.250 | 48 | 21 | 0 | 46 | 93 | 112 | 159 | 4.97e-14 | 69.7 |
| MS.gene43886.t1 | AT3G14320 | 55.102 | 49 | 22 | 0 | 41 | 89 | 82 | 130 | 6.57e-14 | 69.3 |
| MS.gene43886.t1 | AT1G49230 | 55.319 | 47 | 21 | 0 | 46 | 92 | 130 | 176 | 8.70e-14 | 69.3 |
| MS.gene43886.t1 | AT1G49220 | 41.026 | 78 | 41 | 2 | 19 | 93 | 106 | 181 | 1.23e-13 | 69.3 |
| MS.gene43886.t1 | AT4G17920 | 41.558 | 77 | 42 | 1 | 19 | 92 | 79 | 155 | 1.89e-13 | 69.3 |
| MS.gene43886.t1 | AT5G58580 | 41.558 | 77 | 44 | 1 | 19 | 94 | 109 | 185 | 2.68e-13 | 68.9 |
| MS.gene43886.t1 | AT3G18773 | 40.260 | 77 | 41 | 2 | 19 | 92 | 101 | 175 | 4.31e-13 | 67.4 |
| MS.gene43886.t1 | AT2G17450 | 53.191 | 47 | 22 | 0 | 46 | 92 | 101 | 147 | 4.57e-13 | 66.6 |
| MS.gene43886.t1 | AT3G19140 | 35.632 | 87 | 52 | 2 | 20 | 103 | 53 | 138 | 5.35e-13 | 65.5 |
| MS.gene43886.t1 | AT1G49210 | 38.961 | 77 | 42 | 2 | 19 | 92 | 106 | 180 | 8.97e-13 | 66.6 |
| MS.gene43886.t1 | AT1G32361 | 38.889 | 72 | 42 | 1 | 21 | 92 | 130 | 199 | 1.48e-12 | 67.0 |
| MS.gene43886.t1 | AT5G53110 | 41.176 | 85 | 44 | 2 | 13 | 91 | 290 | 374 | 1.98e-12 | 67.0 |
| MS.gene43886.t1 | AT1G49200 | 36.364 | 77 | 44 | 2 | 19 | 92 | 107 | 181 | 3.23e-12 | 65.1 |
| MS.gene43886.t1 | AT5G47610 | 39.706 | 68 | 36 | 2 | 31 | 95 | 90 | 155 | 5.66e-12 | 63.2 |
| MS.gene43886.t1 | AT2G46493 | 48.889 | 45 | 23 | 0 | 47 | 91 | 138 | 182 | 1.10e-11 | 62.8 |
| MS.gene43886.t1 | AT1G28040 | 36.709 | 79 | 38 | 2 | 20 | 91 | 224 | 297 | 1.71e-11 | 63.9 |
| MS.gene43886.t1 | AT1G74410 | 32.468 | 77 | 52 | 0 | 16 | 92 | 145 | 221 | 2.40e-11 | 62.4 |
| MS.gene43886.t1 | AT4G17245 | 38.636 | 88 | 52 | 2 | 9 | 94 | 63 | 150 | 2.65e-11 | 61.2 |
| MS.gene43886.t1 | AT2G18670 | 42.857 | 70 | 39 | 1 | 21 | 89 | 83 | 152 | 2.97e-11 | 61.2 |
| MS.gene43886.t1 | AT4G30370 | 38.158 | 76 | 47 | 0 | 18 | 93 | 86 | 161 | 3.07e-11 | 61.2 |
| MS.gene43886.t1 | AT5G66070 | 50.000 | 50 | 25 | 0 | 43 | 92 | 172 | 221 | 3.28e-11 | 62.0 |
| MS.gene43886.t1 | AT5G66070 | 50.000 | 50 | 25 | 0 | 43 | 92 | 172 | 221 | 3.28e-11 | 62.0 |
| MS.gene43886.t1 | AT4G35840 | 36.000 | 100 | 52 | 3 | 1 | 92 | 141 | 236 | 3.90e-11 | 62.0 |
| MS.gene43886.t1 | AT5G06490 | 44.444 | 45 | 25 | 0 | 47 | 91 | 129 | 173 | 4.81e-11 | 61.2 |
| MS.gene43886.t1 | AT2G17730 | 53.488 | 43 | 20 | 0 | 47 | 89 | 196 | 238 | 5.05e-11 | 61.6 |
| MS.gene43886.t1 | AT5G66070 | 50.000 | 50 | 25 | 0 | 43 | 92 | 196 | 245 | 7.66e-11 | 61.2 |
| MS.gene43886.t1 | AT2G37580 | 51.111 | 45 | 22 | 0 | 46 | 90 | 141 | 185 | 8.35e-11 | 61.2 |
Find 46 sgRNAs with CRISPR-Local
Find 58 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTGCTTTGAAAGCTTCTA+AGG | 0.247068 | 5.2:-25085680 | MS.gene43886:CDS |
| TGAAAAGCATGGTTACAATT+TGG | 0.249185 | 5.2:+25086048 | None:intergenic |
| TTCATTTACAAAGAGATAAT+TGG | 0.261186 | 5.2:-25086141 | MS.gene43886:CDS |
| AGGGATGAGGAATTTGTTAT+AGG | 0.273633 | 5.2:-25085907 | MS.gene43886:CDS |
| AAGAAAACCCTTGTGAATAA+AGG | 0.282232 | 5.2:+25085965 | None:intergenic |
| ATCTCTTTGTAAATGAAAAC+TGG | 0.313194 | 5.2:+25086147 | None:intergenic |
| AAAGCTGTTGTAACTGTCTT+TGG | 0.317238 | 5.2:+25086217 | None:intergenic |
| CATCCATGGCAAACTTTCAT+TGG | 0.319838 | 5.2:+25085459 | None:intergenic |
| GGGATGAGGAATTTGTTATA+GGG | 0.336556 | 5.2:-25085906 | MS.gene43886:CDS |
| GCCTTCAACATCACCATCAT+TGG | 0.348566 | 5.2:+25085600 | None:intergenic |
| ATCATATAATGAATGGGAAA+AGG | 0.397814 | 5.2:-25085855 | MS.gene43886:CDS |
| ATGGAAAATCATATAATGAA+TGG | 0.401649 | 5.2:-25085862 | MS.gene43886:CDS |
| GTTAGGAGATGTTATTCAAT+GGG | 0.406578 | 5.2:-25085739 | MS.gene43886:CDS |
| TGGTTCAGTTAACAAAGATA+TGG | 0.410268 | 5.2:-25085881 | MS.gene43886:CDS |
| AGAAAACCCTTGTGAATAAA+GGG | 0.412486 | 5.2:+25085966 | None:intergenic |
| TAAAGGGTATTTCTACATAA+AGG | 0.417585 | 5.2:+25085982 | None:intergenic |
| GAGGAATTTGTTATAGGGAT+TGG | 0.424576 | 5.2:-25085901 | MS.gene43886:CDS |
| TCATATAATGAATGGGAAAA+GGG | 0.428007 | 5.2:-25085854 | MS.gene43886:CDS |
| AGAAGTTCAAATAATGAAGA+AGG | 0.433060 | 5.2:-25085805 | MS.gene43886:CDS |
| TGGAAAATCATATAATGAAT+GGG | 0.440307 | 5.2:-25085861 | MS.gene43886:CDS |
| GAAGTTCAAATAATGAAGAA+GGG | 0.466894 | 5.2:-25085804 | MS.gene43886:CDS |
| TGTTAGGAGATGTTATTCAA+TGG | 0.476463 | 5.2:-25085740 | MS.gene43886:CDS |
| AAACAAACAGCACAATCAAA+TGG | 0.495898 | 5.2:+25086108 | None:intergenic |
| GGAATTAGAGAAATTCAAGA+TGG | 0.503159 | 5.2:-25085631 | MS.gene43886:CDS |
| GTTTGAGGATGAAAGGGATG+AGG | 0.511549 | 5.2:-25085920 | MS.gene43886:CDS |
| CCTCTAGCTTTATTCATCCA+TGG | 0.514626 | 5.2:+25085445 | None:intergenic |
| TCCAATGATGGTGATGTTGA+AGG | 0.519052 | 5.2:-25085601 | MS.gene43886:CDS |
| ATATTAGTTGTATAGATACA+TGG | 0.521360 | 5.2:-25086026 | MS.gene43886:CDS |
| CTGTTTCAAAGATTTGGCAA+TGG | 0.532756 | 5.2:-25085540 | MS.gene43886:CDS |
| TGGTAGTATGAGACAATTGA+AGG | 0.535499 | 5.2:-25085653 | MS.gene43886:CDS |
| GCAAGAAGATTAACATTGCA+AGG | 0.535706 | 5.2:-25085579 | MS.gene43886:CDS |
| GAATTAGAGAAATTCAAGAT+GGG | 0.549355 | 5.2:-25085630 | MS.gene43886:CDS |
| TTGAAAGCTTCTAAGGGTGA+TGG | 0.555562 | 5.2:-25085673 | MS.gene43886:CDS |
| AAGATTAACATTGCAAGGAA+AGG | 0.566180 | 5.2:-25085574 | MS.gene43886:CDS |
| GATTTGGCAATGGTCTAAGA+AGG | 0.568152 | 5.2:-25085530 | MS.gene43886:CDS |
| GAAATACCCTTTATTCACAA+GGG | 0.583195 | 5.2:-25085972 | MS.gene43886:CDS |
| GTTGCTTTGAAAGCTTCTAA+GGG | 0.589439 | 5.2:-25085679 | MS.gene43886:CDS |
| TACAACTAATATGAAAAGCA+TGG | 0.605772 | 5.2:+25086037 | None:intergenic |
| AAGTTCAAATAATGAAGAAG+GGG | 0.611593 | 5.2:-25085803 | MS.gene43886:CDS |
| AGAAATACCCTTTATTCACA+AGG | 0.611996 | 5.2:-25085973 | MS.gene43886:CDS |
| TTGCCAATGAAAGTTTGCCA+TGG | 0.621500 | 5.2:-25085462 | MS.gene43886:CDS |
| AAATGTGTATCAGATGAACT+TGG | 0.625231 | 5.2:+25085496 | None:intergenic |
| GGTAGTATGAGACAATTGAA+GGG | 0.646173 | 5.2:-25085652 | MS.gene43886:CDS |
| CCATGGATGAATAAAGCTAG+AGG | 0.652428 | 5.2:-25085445 | MS.gene43886:CDS |
| AGTTCAAATAATGAAGAAGG+GGG | 0.682254 | 5.2:-25085802 | MS.gene43886:CDS |
| TTAGGAGATGTTATTCAATG+GGG | 0.702665 | 5.2:-25085738 | MS.gene43886:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAGTTGTATAGATACA+TGG | - | chr5.2:25085649-25085668 | MS.gene43886:CDS | 20.0% |
| !! | ATGGAAAATCATATAATGAA+TGG | - | chr5.2:25085813-25085832 | MS.gene43886:CDS | 20.0% |
| !! | TGGAAAATCATATAATGAAT+GGG | - | chr5.2:25085814-25085833 | MS.gene43886:CDS | 20.0% |
| !! | TTCATTTACAAAGAGATAAT+TGG | - | chr5.2:25085534-25085553 | MS.gene43886:CDS | 20.0% |
| !!! | GTAATTGTAATTTTGATGTT+AGG | - | chr5.2:25085919-25085938 | MS.gene43886:CDS | 20.0% |
| ! | AAGTTCAAATAATGAAGAAG+GGG | - | chr5.2:25085872-25085891 | MS.gene43886:CDS | 25.0% |
| ! | AGAAGTTCAAATAATGAAGA+AGG | - | chr5.2:25085870-25085889 | MS.gene43886:CDS | 25.0% |
| ! | ATCATATAATGAATGGGAAA+AGG | - | chr5.2:25085820-25085839 | MS.gene43886:CDS | 25.0% |
| ! | ATCTCTTTGTAAATGAAAAC+TGG | + | chr5.2:25085531-25085550 | None:intergenic | 25.0% |
| ! | GAAGTTCAAATAATGAAGAA+GGG | - | chr5.2:25085871-25085890 | MS.gene43886:CDS | 25.0% |
| ! | GAATTAGAGAAATTCAAGAT+GGG | - | chr5.2:25086045-25086064 | MS.gene43886:CDS | 25.0% |
| ! | TACAACTAATATGAAAAGCA+TGG | + | chr5.2:25085641-25085660 | None:intergenic | 25.0% |
| ! | TCATATAATGAATGGGAAAA+GGG | - | chr5.2:25085821-25085840 | MS.gene43886:CDS | 25.0% |
| !! | GTTTTTCTGTTTCAAAGATT+TGG | - | chr5.2:25086129-25086148 | MS.gene43886:CDS | 25.0% |
| !! | TGTTTGTTTATGTGAGTTTT+TGG | - | chr5.2:25085581-25085600 | MS.gene43886:CDS | 25.0% |
| !!! | TAAAGGGTATTTCTACATAA+AGG | + | chr5.2:25085696-25085715 | None:intergenic | 25.0% |
| AAACAAACAGCACAATCAAA+TGG | + | chr5.2:25085570-25085589 | None:intergenic | 30.0% | |
| AAATGTGTATCAGATGAACT+TGG | + | chr5.2:25086182-25086201 | None:intergenic | 30.0% | |
| AAGAAAACCCTTGTGAATAA+AGG | + | chr5.2:25085713-25085732 | None:intergenic | 30.0% | |
| AAGATTAACATTGCAAGGAA+AGG | - | chr5.2:25086101-25086120 | MS.gene43886:CDS | 30.0% | |
| AGAAAACCCTTGTGAATAAA+GGG | + | chr5.2:25085712-25085731 | None:intergenic | 30.0% | |
| AGAAATACCCTTTATTCACA+AGG | - | chr5.2:25085702-25085721 | MS.gene43886:CDS | 30.0% | |
| AGTTCAAATAATGAAGAAGG+GGG | - | chr5.2:25085873-25085892 | MS.gene43886:CDS | 30.0% | |
| GAAATACCCTTTATTCACAA+GGG | - | chr5.2:25085703-25085722 | MS.gene43886:CDS | 30.0% | |
| GGAATTAGAGAAATTCAAGA+TGG | - | chr5.2:25086044-25086063 | MS.gene43886:CDS | 30.0% | |
| GTTAGGAGATGTTATTCAAT+GGG | - | chr5.2:25085936-25085955 | MS.gene43886:CDS | 30.0% | |
| TGGTTCAGTTAACAAAGATA+TGG | - | chr5.2:25085794-25085813 | MS.gene43886:CDS | 30.0% | |
| TGTTAGGAGATGTTATTCAA+TGG | - | chr5.2:25085935-25085954 | MS.gene43886:CDS | 30.0% | |
| TTAGGAGATGTTATTCAATG+GGG | - | chr5.2:25085937-25085956 | MS.gene43886:CDS | 30.0% | |
| ! | CTTTTCAATCTTCATGATTC+AGG | - | chr5.2:25085477-25085496 | MS.gene43886:CDS | 30.0% |
| ! | TGAAAAGCATGGTTACAATT+TGG | + | chr5.2:25085630-25085649 | None:intergenic | 30.0% |
| !!! | AAATCCTGTTTTTGAGTTTG+AGG | - | chr5.2:25085740-25085759 | MS.gene43886:CDS | 30.0% |
| !!! | TTTTGAGTTTGAGGATGAAA+GGG | - | chr5.2:25085749-25085768 | MS.gene43886:CDS | 30.0% |
| !!! | TTTTTGAGTTTGAGGATGAA+AGG | - | chr5.2:25085748-25085767 | MS.gene43886:CDS | 30.0% |
| AAAGCTGTTGTAACTGTCTT+TGG | + | chr5.2:25085461-25085480 | None:intergenic | 35.0% | |
| CTGTTTCAAAGATTTGGCAA+TGG | - | chr5.2:25086135-25086154 | MS.gene43886:CDS | 35.0% | |
| GCAAGAAGATTAACATTGCA+AGG | - | chr5.2:25086096-25086115 | MS.gene43886:CDS | 35.0% | |
| GGTAGTATGAGACAATTGAA+GGG | - | chr5.2:25086023-25086042 | MS.gene43886:CDS | 35.0% | |
| TCATCCTCAAACTCAAAAAC+AGG | + | chr5.2:25085747-25085766 | None:intergenic | 35.0% | |
| TGGTAGTATGAGACAATTGA+AGG | - | chr5.2:25086022-25086041 | MS.gene43886:CDS | 35.0% | |
| !! | AGGGATGAGGAATTTGTTAT+AGG | - | chr5.2:25085768-25085787 | MS.gene43886:CDS | 35.0% |
| !! | AGTTGCTTTGAAAGCTTCTA+AGG | - | chr5.2:25085995-25086014 | MS.gene43886:CDS | 35.0% |
| !! | GAGGAATTTGTTATAGGGAT+TGG | - | chr5.2:25085774-25085793 | MS.gene43886:CDS | 35.0% |
| !! | GGGATGAGGAATTTGTTATA+GGG | - | chr5.2:25085769-25085788 | MS.gene43886:CDS | 35.0% |
| !! | GTTGCTTTGAAAGCTTCTAA+GGG | - | chr5.2:25085996-25086015 | MS.gene43886:CDS | 35.0% |
| !!! | GGAAAAGGGTTTTTTCTGTT+AGG | - | chr5.2:25085835-25085854 | MS.gene43886:CDS | 35.0% |
| CATCCATGGCAAACTTTCAT+TGG | + | chr5.2:25086219-25086238 | None:intergenic | 40.0% | |
| CCATGGATGAATAAAGCTAG+AGG | - | chr5.2:25086230-25086249 | MS.gene43886:CDS | 40.0% | |
| GATTTGGCAATGGTCTAAGA+AGG | - | chr5.2:25086145-25086164 | MS.gene43886:CDS | 40.0% | |
| TTGCCAATGAAAGTTTGCCA+TGG | - | chr5.2:25086213-25086232 | MS.gene43886:CDS | 40.0% | |
| ! | GATGGGAGTTTTTCCAATGA+TGG | - | chr5.2:25086062-25086081 | MS.gene43886:CDS | 40.0% |
| ! | TCCAATGATGGTGATGTTGA+AGG | - | chr5.2:25086074-25086093 | MS.gene43886:CDS | 40.0% |
| ! | TTGAAAGCTTCTAAGGGTGA+TGG | - | chr5.2:25086002-25086021 | MS.gene43886:CDS | 40.0% |
| !! | CCTCTAGCTTTATTCATCCA+TGG | + | chr5.2:25086233-25086252 | None:intergenic | 40.0% |
| !!! | AGGGTTTTTTCTGTTAGGCT+TGG | - | chr5.2:25085840-25085859 | MS.gene43886:CDS | 40.0% |
| GCCTTCAACATCACCATCAT+TGG | + | chr5.2:25086078-25086097 | None:intergenic | 45.0% | |
| GTTTGAGGATGAAAGGGATG+AGG | - | chr5.2:25085755-25085774 | MS.gene43886:CDS | 45.0% | |
| ! | GAAGGGGGTGCAAAAAGTGA+AGG | - | chr5.2:25085888-25085907 | MS.gene43886:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 25085438 | 25086259 | 25085438 | ID=MS.gene43886 |
| chr5.2 | mRNA | 25085438 | 25086259 | 25085438 | ID=MS.gene43886.t1;Parent=MS.gene43886 |
| chr5.2 | exon | 25085438 | 25086259 | 25085438 | ID=MS.gene43886.t1.exon1;Parent=MS.gene43886.t1 |
| chr5.2 | CDS | 25085438 | 25086259 | 25085438 | ID=cds.MS.gene43886.t1;Parent=MS.gene43886.t1 |
| Gene Sequence |
| Protein sequence |
