Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45228.t1 | XP_003621334.1 | 96.2 | 371 | 12 | 1 | 1 | 371 | 1 | 369 | 1.00E-203 | 719.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45228.t1 | P93324 | 61.9 | 367 | 136 | 3 | 7 | 371 | 8 | 372 | 1.0e-127 | 458.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45228.t1 | G7L362 | 96.2 | 371 | 12 | 1 | 1 | 371 | 1 | 369 | 7.3e-204 | 719.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04932 | MS.gene45228 | 0.826368 | 2.82E-54 | -1.69E-46 |
| MS.gene049549 | MS.gene45228 | 0.837295 | 5.66E-57 | -1.69E-46 |
| MS.gene049611 | MS.gene45228 | 0.842746 | 2.14E-58 | -1.69E-46 |
| MS.gene049634 | MS.gene45228 | 0.824558 | 7.56E-54 | -1.69E-46 |
| MS.gene050381 | MS.gene45228 | 0.801047 | 1.08E-48 | -1.69E-46 |
| MS.gene050612 | MS.gene45228 | -0.807695 | 4.46E-50 | -1.69E-46 |
| MS.gene05079 | MS.gene45228 | 0.80159 | 8.38E-49 | -1.69E-46 |
| MS.gene050809 | MS.gene45228 | 0.802838 | 4.64E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene45228 | 0.84222 | 2.95E-58 | -1.69E-46 |
| MS.gene051131 | MS.gene45228 | 0.8418 | 3.81E-58 | -1.69E-46 |
| MS.gene051138 | MS.gene45228 | 0.81551 | 8.91E-52 | -1.69E-46 |
| MS.gene051364 | MS.gene45228 | 0.8124 | 4.32E-51 | -1.69E-46 |
| MS.gene051366 | MS.gene45228 | 0.820142 | 8.02E-53 | -1.69E-46 |
| MS.gene051422 | MS.gene45228 | 0.818336 | 2.07E-52 | -1.69E-46 |
| MS.gene051632 | MS.gene45228 | 0.830431 | 2.95E-55 | -1.69E-46 |
| MS.gene051874 | MS.gene45228 | -0.807181 | 5.73E-50 | -1.69E-46 |
| MS.gene052211 | MS.gene45228 | 0.819886 | 9.18E-53 | -1.69E-46 |
| MS.gene05240 | MS.gene45228 | 0.848216 | 7.06E-60 | -1.69E-46 |
| MS.gene05244 | MS.gene45228 | 0.820647 | 6.14E-53 | -1.69E-46 |
| MS.gene052606 | MS.gene45228 | 0.837373 | 5.40E-57 | -1.69E-46 |
| MS.gene052702 | MS.gene45228 | 0.853246 | 2.71E-61 | -1.69E-46 |
| MS.gene052805 | MS.gene45228 | 0.837424 | 5.24E-57 | -1.69E-46 |
| MS.gene053420 | MS.gene45228 | 0.84614 | 2.62E-59 | -1.69E-46 |
| MS.gene053479 | MS.gene45228 | -0.816839 | 4.50E-52 | -1.69E-46 |
| MS.gene053488 | MS.gene45228 | 0.810226 | 1.28E-50 | -1.69E-46 |
| MS.gene053887 | MS.gene45228 | 0.832225 | 1.07E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene45228 | -0.819013 | 1.45E-52 | -1.69E-46 |
| MS.gene054146 | MS.gene45228 | 0.829624 | 4.64E-55 | -1.69E-46 |
| MS.gene054181 | MS.gene45228 | 0.83392 | 4.04E-56 | -1.69E-46 |
| MS.gene054277 | MS.gene45228 | 0.809946 | 1.47E-50 | -1.69E-46 |
| MS.gene054290 | MS.gene45228 | 0.838918 | 2.16E-57 | -1.69E-46 |
| MS.gene054706 | MS.gene45228 | 0.804752 | 1.86E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene45228 | 0.817216 | 3.70E-52 | -1.69E-46 |
| MS.gene05483 | MS.gene45228 | 0.82068 | 6.03E-53 | -1.69E-46 |
| MS.gene055124 | MS.gene45228 | 0.80458 | 2.02E-49 | -1.69E-46 |
| MS.gene055154 | MS.gene45228 | 0.828229 | 1.01E-54 | -1.69E-46 |
| MS.gene055959 | MS.gene45228 | 0.843765 | 1.15E-58 | -1.69E-46 |
| MS.gene056224 | MS.gene45228 | 0.820795 | 5.68E-53 | -1.69E-46 |
| MS.gene056359 | MS.gene45228 | 0.830181 | 3.39E-55 | -1.69E-46 |
| MS.gene056590 | MS.gene45228 | 0.859601 | 3.69E-63 | -1.69E-46 |
| MS.gene056591 | MS.gene45228 | 0.858539 | 7.69E-63 | -1.69E-46 |
| MS.gene056694 | MS.gene45228 | 0.807918 | 4.00E-50 | -1.69E-46 |
| MS.gene056697 | MS.gene45228 | 0.84611 | 2.67E-59 | -1.69E-46 |
| MS.gene056748 | MS.gene45228 | 0.820922 | 5.31E-53 | -1.69E-46 |
| MS.gene056856 | MS.gene45228 | 0.873772 | 1.14E-67 | -1.69E-46 |
| MS.gene056920 | MS.gene45228 | 0.807808 | 4.22E-50 | -1.69E-46 |
| MS.gene057261 | MS.gene45228 | 0.82608 | 3.30E-54 | -1.69E-46 |
| MS.gene057544 | MS.gene45228 | 0.89511 | 1.31E-75 | -1.69E-46 |
| MS.gene057547 | MS.gene45228 | 0.821114 | 4.80E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene45228 | 0.80767 | 4.51E-50 | -1.69E-46 |
| MS.gene057549 | MS.gene45228 | 0.848469 | 6.01E-60 | -1.69E-46 |
| MS.gene057550 | MS.gene45228 | 0.809634 | 1.72E-50 | -1.69E-46 |
| MS.gene057768 | MS.gene45228 | 0.822185 | 2.71E-53 | -1.69E-46 |
| MS.gene058067 | MS.gene45228 | 0.83567 | 1.47E-56 | -1.69E-46 |
| MS.gene058068 | MS.gene45228 | 0.83538 | 1.74E-56 | -1.69E-46 |
| MS.gene058093 | MS.gene45228 | 0.834527 | 2.85E-56 | -1.69E-46 |
| MS.gene058099 | MS.gene45228 | 0.854393 | 1.27E-61 | -1.69E-46 |
| MS.gene058109 | MS.gene45228 | 0.815228 | 1.03E-51 | -1.69E-46 |
| MS.gene058268 | MS.gene45228 | 0.820339 | 7.23E-53 | -1.69E-46 |
| MS.gene058269 | MS.gene45228 | 0.824948 | 6.12E-54 | -1.69E-46 |
| MS.gene058381 | MS.gene45228 | 0.807161 | 5.79E-50 | -1.69E-46 |
| MS.gene058382 | MS.gene45228 | 0.820309 | 7.34E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene45228 | -0.803997 | 2.67E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene45228 | 0.82883 | 7.23E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene45228 | -0.801522 | 8.65E-49 | -1.69E-46 |
| MS.gene059037 | MS.gene45228 | 0.812308 | 4.53E-51 | -1.69E-46 |
| MS.gene059038 | MS.gene45228 | 0.805776 | 1.13E-49 | -1.69E-46 |
| MS.gene05926 | MS.gene45228 | 0.803891 | 2.81E-49 | -1.69E-46 |
| MS.gene059315 | MS.gene45228 | 0.82883 | 7.23E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene45228 | 0.840133 | 1.04E-57 | -1.69E-46 |
| MS.gene059953 | MS.gene45228 | 0.859638 | 3.60E-63 | -1.69E-46 |
| MS.gene059955 | MS.gene45228 | 0.851502 | 8.51E-61 | -1.69E-46 |
| MS.gene060405 | MS.gene45228 | 0.813431 | 2.57E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45228.t1 | MTR_7g012020 | 96.226 | 371 | 12 | 1 | 1 | 371 | 1 | 369 | 0.0 | 736 |
| MS.gene45228.t1 | MTR_7g012040 | 79.784 | 371 | 72 | 2 | 1 | 371 | 1 | 368 | 0.0 | 610 |
| MS.gene45228.t1 | MTR_7g011900 | 77.297 | 370 | 82 | 1 | 2 | 371 | 3 | 370 | 0.0 | 597 |
| MS.gene45228.t1 | MTR_7g011990 | 73.585 | 371 | 91 | 2 | 2 | 371 | 3 | 367 | 0.0 | 568 |
| MS.gene45228.t1 | MTR_7g012070 | 72.654 | 373 | 99 | 2 | 2 | 371 | 3 | 375 | 0.0 | 565 |
| MS.gene45228.t1 | MTR_7g012090 | 72.922 | 373 | 98 | 2 | 2 | 371 | 3 | 375 | 0.0 | 564 |
| MS.gene45228.t1 | MTR_7g012020 | 95.620 | 274 | 10 | 1 | 1 | 274 | 1 | 272 | 0.0 | 535 |
| MS.gene45228.t1 | MTR_2g055940 | 68.750 | 352 | 107 | 1 | 20 | 371 | 15 | 363 | 0.0 | 510 |
| MS.gene45228.t1 | MTR_7g012020 | 94.882 | 254 | 11 | 1 | 1 | 254 | 1 | 252 | 3.29e-177 | 492 |
| MS.gene45228.t1 | MTR_1g096310 | 62.125 | 367 | 135 | 3 | 7 | 371 | 8 | 372 | 1.36e-166 | 470 |
| MS.gene45228.t1 | MTR_1g036490 | 49.057 | 371 | 183 | 6 | 4 | 371 | 3 | 370 | 2.12e-128 | 373 |
| MS.gene45228.t1 | MTR_1g036460 | 49.057 | 371 | 183 | 5 | 4 | 371 | 3 | 370 | 2.95e-128 | 373 |
| MS.gene45228.t1 | MTR_3g021430 | 53.039 | 362 | 163 | 6 | 12 | 371 | 1 | 357 | 5.35e-128 | 372 |
| MS.gene45228.t1 | MTR_3g021440 | 52.861 | 367 | 163 | 6 | 10 | 371 | 9 | 370 | 1.20e-127 | 371 |
| MS.gene45228.t1 | MTR_1g036510 | 50.565 | 354 | 170 | 4 | 21 | 371 | 33 | 384 | 1.03e-119 | 352 |
| MS.gene45228.t1 | MTR_3g092900 | 44.110 | 365 | 196 | 6 | 8 | 371 | 6 | 363 | 3.19e-102 | 306 |
| MS.gene45228.t1 | MTR_5g098170 | 42.033 | 364 | 199 | 9 | 13 | 371 | 7 | 363 | 3.67e-92 | 281 |
| MS.gene45228.t1 | MTR_7g118300 | 41.892 | 370 | 206 | 8 | 4 | 371 | 13 | 375 | 3.70e-91 | 278 |
| MS.gene45228.t1 | MTR_1g036510 | 53.333 | 255 | 115 | 3 | 21 | 273 | 33 | 285 | 4.71e-85 | 260 |
| MS.gene45228.t1 | MTR_1g050220 | 43.769 | 329 | 133 | 6 | 25 | 351 | 6 | 284 | 2.12e-84 | 258 |
| MS.gene45228.t1 | MTR_0591s0010 | 39.178 | 365 | 209 | 8 | 13 | 371 | 20 | 377 | 5.29e-84 | 260 |
| MS.gene45228.t1 | MTR_7g118320 | 38.420 | 367 | 211 | 9 | 12 | 371 | 4 | 362 | 1.81e-80 | 251 |
| MS.gene45228.t1 | MTR_8g068690 | 38.462 | 364 | 213 | 8 | 13 | 371 | 19 | 376 | 3.48e-79 | 248 |
| MS.gene45228.t1 | MTR_8g068750 | 37.363 | 364 | 217 | 8 | 13 | 371 | 20 | 377 | 9.40e-77 | 241 |
| MS.gene45228.t1 | MTR_8g068870 | 38.484 | 343 | 199 | 8 | 34 | 371 | 28 | 363 | 5.51e-76 | 239 |
| MS.gene45228.t1 | MTR_1g036510 | 51.709 | 234 | 109 | 3 | 21 | 252 | 33 | 264 | 1.83e-73 | 229 |
| MS.gene45228.t1 | MTR_8g024160 | 37.183 | 355 | 176 | 6 | 18 | 371 | 20 | 328 | 3.82e-70 | 223 |
| MS.gene45228.t1 | MTR_6g060290 | 61.290 | 186 | 52 | 3 | 2 | 185 | 3 | 170 | 3.23e-69 | 215 |
| MS.gene45228.t1 | MTR_6g078850 | 37.709 | 358 | 209 | 8 | 20 | 370 | 32 | 382 | 2.30e-67 | 221 |
| MS.gene45228.t1 | MTR_8g068570 | 36.364 | 330 | 175 | 6 | 13 | 338 | 20 | 318 | 1.33e-65 | 211 |
| MS.gene45228.t1 | MTR_2g072790 | 37.117 | 326 | 191 | 8 | 32 | 352 | 20 | 336 | 3.16e-64 | 208 |
| MS.gene45228.t1 | MTR_3g096050 | 35.977 | 353 | 209 | 8 | 25 | 371 | 17 | 358 | 1.53e-60 | 199 |
| MS.gene45228.t1 | MTR_8g068730 | 33.791 | 364 | 198 | 10 | 13 | 371 | 20 | 345 | 7.64e-58 | 192 |
| MS.gene45228.t1 | MTR_3g096070 | 35.119 | 336 | 183 | 8 | 25 | 356 | 17 | 321 | 4.20e-55 | 184 |
| MS.gene45228.t1 | MTR_8g068690 | 38.491 | 265 | 154 | 6 | 13 | 273 | 19 | 278 | 1.54e-54 | 181 |
| MS.gene45228.t1 | MTR_0017s0100 | 32.743 | 339 | 205 | 11 | 40 | 370 | 44 | 367 | 3.09e-49 | 170 |
| MS.gene45228.t1 | MTR_8g068600 | 36.822 | 258 | 147 | 6 | 45 | 291 | 27 | 279 | 1.95e-47 | 162 |
| MS.gene45228.t1 | MTR_0079s0070 | 33.742 | 326 | 194 | 10 | 40 | 357 | 10 | 321 | 1.60e-46 | 162 |
| MS.gene45228.t1 | MTR_3g083620 | 31.269 | 323 | 205 | 7 | 38 | 356 | 38 | 347 | 1.95e-46 | 162 |
| MS.gene45228.t1 | MTR_4g038440 | 33.639 | 327 | 195 | 10 | 39 | 357 | 43 | 355 | 3.72e-46 | 162 |
| MS.gene45228.t1 | MTR_8g068740 | 33.692 | 279 | 144 | 8 | 13 | 287 | 20 | 261 | 6.84e-43 | 150 |
| MS.gene45228.t1 | MTR_1g076940 | 28.319 | 339 | 226 | 7 | 39 | 370 | 32 | 360 | 8.85e-43 | 152 |
| MS.gene45228.t1 | MTR_3g096050 | 36.400 | 250 | 151 | 5 | 25 | 273 | 17 | 259 | 1.91e-41 | 146 |
| MS.gene45228.t1 | MTR_5g074600 | 27.326 | 344 | 233 | 8 | 33 | 370 | 26 | 358 | 8.10e-39 | 142 |
| MS.gene45228.t1 | MTR_4g033015 | 32.840 | 338 | 209 | 9 | 39 | 366 | 32 | 361 | 3.28e-38 | 140 |
| MS.gene45228.t1 | MTR_4g088345 | 29.532 | 342 | 217 | 11 | 37 | 370 | 30 | 355 | 1.78e-37 | 138 |
| MS.gene45228.t1 | MTR_7g014510 | 27.245 | 323 | 217 | 7 | 40 | 356 | 33 | 343 | 1.81e-37 | 138 |
| MS.gene45228.t1 | MTR_7g024520 | 28.783 | 337 | 216 | 10 | 37 | 369 | 29 | 345 | 2.24e-37 | 138 |
| MS.gene45228.t1 | MTR_5g074680 | 28.116 | 345 | 229 | 10 | 33 | 370 | 27 | 359 | 2.25e-37 | 138 |
| MS.gene45228.t1 | MTR_4g033200 | 32.544 | 338 | 210 | 9 | 39 | 366 | 32 | 361 | 2.73e-37 | 138 |
| MS.gene45228.t1 | MTR_5g074580 | 28.198 | 344 | 230 | 9 | 33 | 370 | 27 | 359 | 7.70e-37 | 137 |
| MS.gene45228.t1 | MTR_4g088340 | 27.859 | 341 | 224 | 9 | 37 | 370 | 7 | 332 | 9.81e-37 | 136 |
| MS.gene45228.t1 | MTR_7g014570 | 28.060 | 335 | 221 | 8 | 40 | 370 | 33 | 351 | 2.67e-36 | 135 |
| MS.gene45228.t1 | MTR_8g068620 | 52.727 | 110 | 52 | 0 | 165 | 274 | 2 | 111 | 7.60e-36 | 127 |
| MS.gene45228.t1 | MTR_7g024500 | 28.783 | 337 | 216 | 10 | 37 | 369 | 29 | 345 | 1.02e-35 | 134 |
| MS.gene45228.t1 | MTR_4g079160 | 30.183 | 328 | 200 | 11 | 40 | 356 | 32 | 341 | 3.13e-35 | 132 |
| MS.gene45228.t1 | MTR_4g088200 | 29.518 | 332 | 218 | 8 | 33 | 357 | 26 | 348 | 2.58e-34 | 130 |
| MS.gene45228.t1 | MTR_5g074540 | 31.390 | 223 | 144 | 4 | 141 | 356 | 107 | 327 | 2.17e-33 | 127 |
| MS.gene45228.t1 | MTR_4g033150 | 29.674 | 337 | 221 | 8 | 39 | 366 | 32 | 361 | 3.79e-33 | 127 |
| MS.gene45228.t1 | MTR_5g074610 | 28.689 | 244 | 140 | 5 | 133 | 370 | 110 | 325 | 1.02e-28 | 114 |
| MS.gene45228.t1 | MTR_4g088190 | 29.641 | 334 | 218 | 8 | 33 | 357 | 26 | 351 | 1.06e-28 | 115 |
| MS.gene45228.t1 | MTR_1g076930 | 28.099 | 242 | 158 | 6 | 37 | 273 | 7 | 237 | 1.46e-27 | 109 |
| MS.gene45228.t1 | MTR_4g038440 | 32.773 | 238 | 145 | 6 | 40 | 273 | 44 | 270 | 1.94e-27 | 109 |
| MS.gene45228.t1 | MTR_4g033170 | 29.119 | 261 | 168 | 7 | 39 | 295 | 32 | 279 | 3.77e-27 | 110 |
| MS.gene45228.t1 | MTR_4g033085 | 29.231 | 260 | 167 | 7 | 39 | 294 | 32 | 278 | 8.90e-26 | 106 |
| MS.gene45228.t1 | MTR_6g060280 | 76.364 | 55 | 8 | 1 | 225 | 274 | 1 | 55 | 2.27e-20 | 84.7 |
| MS.gene45228.t1 | MTR_0794s0020 | 28.319 | 226 | 149 | 7 | 39 | 259 | 32 | 249 | 2.27e-18 | 84.0 |
| MS.gene45228.t1 | MTR_8g068760 | 38.000 | 100 | 60 | 2 | 273 | 371 | 135 | 233 | 1.17e-13 | 70.1 |
| MS.gene45228.t1 | MTR_8g068580 | 37.234 | 94 | 53 | 3 | 281 | 371 | 43 | 133 | 3.55e-12 | 63.5 |
| MS.gene45228.t1 | MTR_8g068590 | 33.645 | 107 | 66 | 3 | 34 | 138 | 21 | 124 | 4.74e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45228.t1 | AT5G54160 | 46.742 | 353 | 180 | 5 | 20 | 371 | 16 | 361 | 2.14e-105 | 314 |
| MS.gene45228.t1 | AT1G77520 | 38.378 | 370 | 215 | 7 | 11 | 371 | 16 | 381 | 1.52e-85 | 264 |
| MS.gene45228.t1 | AT1G51990 | 37.394 | 353 | 216 | 4 | 20 | 370 | 12 | 361 | 8.09e-84 | 259 |
| MS.gene45228.t1 | AT1G51990 | 37.394 | 353 | 216 | 4 | 20 | 370 | 12 | 361 | 2.69e-83 | 258 |
| MS.gene45228.t1 | AT1G77530 | 39.888 | 356 | 202 | 7 | 24 | 371 | 30 | 381 | 1.51e-76 | 241 |
| MS.gene45228.t1 | AT1G33030 | 39.143 | 350 | 199 | 9 | 27 | 371 | 10 | 350 | 5.36e-76 | 239 |
| MS.gene45228.t1 | AT1G63140 | 38.781 | 361 | 207 | 8 | 20 | 371 | 26 | 381 | 1.93e-75 | 238 |
| MS.gene45228.t1 | AT1G63140 | 38.046 | 389 | 215 | 10 | 4 | 371 | 18 | 401 | 2.86e-75 | 238 |
| MS.gene45228.t1 | AT1G21130 | 39.276 | 359 | 200 | 10 | 14 | 361 | 13 | 364 | 3.63e-73 | 232 |
| MS.gene45228.t1 | AT1G21100 | 38.936 | 357 | 200 | 10 | 16 | 361 | 15 | 364 | 7.88e-73 | 231 |
| MS.gene45228.t1 | AT1G21110 | 39.776 | 357 | 197 | 10 | 16 | 361 | 15 | 364 | 8.68e-73 | 231 |
| MS.gene45228.t1 | AT1G21120 | 38.936 | 357 | 200 | 10 | 16 | 361 | 15 | 364 | 3.98e-71 | 227 |
| MS.gene45228.t1 | AT1G21120 | 38.936 | 357 | 200 | 10 | 16 | 361 | 63 | 412 | 1.34e-70 | 227 |
| MS.gene45228.t1 | AT5G53810 | 36.812 | 345 | 203 | 8 | 37 | 371 | 39 | 378 | 7.25e-69 | 221 |
| MS.gene45228.t1 | AT1G76790 | 38.108 | 370 | 204 | 11 | 17 | 371 | 6 | 365 | 1.67e-65 | 212 |
| MS.gene45228.t1 | AT3G53140 | 35.347 | 331 | 193 | 7 | 32 | 351 | 20 | 340 | 2.32e-59 | 196 |
| MS.gene45228.t1 | AT1G62900 | 41.748 | 206 | 117 | 2 | 168 | 371 | 1 | 205 | 3.01e-53 | 175 |
| MS.gene45228.t1 | AT5G37170 | 33.856 | 319 | 169 | 9 | 62 | 371 | 49 | 334 | 1.67e-51 | 175 |
| MS.gene45228.t1 | AT1G33030 | 38.956 | 249 | 144 | 6 | 27 | 273 | 10 | 252 | 2.39e-51 | 172 |
| MS.gene45228.t1 | AT1G33030 | 38.956 | 249 | 144 | 6 | 27 | 273 | 10 | 252 | 3.25e-51 | 172 |
| MS.gene45228.t1 | AT5G37170 | 39.899 | 198 | 115 | 3 | 177 | 371 | 38 | 234 | 2.84e-48 | 163 |
| MS.gene45228.t1 | AT1G63140 | 38.276 | 290 | 156 | 8 | 4 | 274 | 18 | 303 | 1.19e-46 | 161 |
| MS.gene45228.t1 | AT1G21130 | 40.074 | 272 | 147 | 9 | 14 | 276 | 13 | 277 | 1.41e-45 | 158 |
| MS.gene45228.t1 | AT5G37170 | 39.572 | 187 | 109 | 3 | 188 | 371 | 1 | 186 | 5.88e-45 | 153 |
| MS.gene45228.t1 | AT1G77530 | 40.851 | 235 | 130 | 5 | 24 | 252 | 30 | 261 | 7.09e-41 | 145 |
| MS.gene45228.t1 | AT4G35150 | 33.654 | 208 | 124 | 4 | 161 | 356 | 105 | 310 | 3.16e-37 | 137 |
| MS.gene45228.t1 | AT1G63140 | 37.091 | 275 | 150 | 8 | 4 | 259 | 18 | 288 | 4.06e-37 | 135 |
| MS.gene45228.t1 | AT4G35160 | 31.457 | 302 | 188 | 7 | 70 | 356 | 70 | 367 | 4.92e-37 | 138 |
Find 70 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAATGGTGATTCATATT+TGG | 0.142189 | 7.3:+85677275 | MS.gene45228:CDS |
| GGTAGCAGAGTGAGAGTTTA+TGG | 0.173191 | 7.3:+85677219 | MS.gene45228:CDS |
| TTTGTTGGTTCTAGATCTTC+TGG | 0.251949 | 7.3:-85679140 | None:intergenic |
| TGTGAAGGAATATGAGAGTT+TGG | 0.271292 | 7.3:+85679229 | MS.gene45228:CDS |
| TGTCTTGCTTTCTCTATCAT+TGG | 0.299632 | 7.3:+85679287 | MS.gene45228:CDS |
| ATTCTCTTTATCATTGGTAT+AGG | 0.305034 | 7.3:-85676908 | None:intergenic |
| GAAAATGGTGATTCATATTT+GGG | 0.308319 | 7.3:+85677276 | MS.gene45228:CDS |
| AACATACGATCGAGCCTATT+CGG | 0.337571 | 7.3:-85677141 | None:intergenic |
| GTCTCACCCTGCTTTGTCAA+TGG | 0.339346 | 7.3:+85677317 | MS.gene45228:CDS |
| CTCTAAATACCCATCAATAA+AGG | 0.344031 | 7.3:+85678352 | MS.gene45228:CDS |
| AAATTAATTGCCTTTATTGA+TGG | 0.347116 | 7.3:-85678362 | None:intergenic |
| CACATGATTCTCTTTATCAT+TGG | 0.364383 | 7.3:-85676914 | None:intergenic |
| TCTAGGCTGTCAGCCATAAT+TGG | 0.371583 | 7.3:+85679030 | MS.gene45228:intron |
| TATGGTACTTGGTGCCAATA+TGG | 0.415869 | 7.3:+85676984 | MS.gene45228:CDS |
| TTCTAGATCTTCTGGTTGCA+AGG | 0.420081 | 7.3:-85679132 | None:intergenic |
| CTCTTCTGTCTGTTTCTACT+CGG | 0.428133 | 7.3:+85677184 | MS.gene45228:CDS |
| AATTAATTGCCTTTATTGAT+GGG | 0.430852 | 7.3:-85678361 | None:intergenic |
| TACAAAGCTTTGCCACCAAA+TGG | 0.432948 | 7.3:+85679089 | MS.gene45228:CDS |
| AACCAACAAATGTATCTAGA+TGG | 0.437328 | 7.3:+85679153 | MS.gene45228:CDS |
| CATTTAGGCATTGAATATGT+TGG | 0.442708 | 7.3:+85678510 | MS.gene45228:intron |
| GTGAAGGAATATGAGAGTTT+GGG | 0.444889 | 7.3:+85679230 | MS.gene45228:CDS |
| AACACTCTGATTTGCCGAAT+AGG | 0.445684 | 7.3:+85677127 | MS.gene45228:CDS |
| AACCGCAGGAAACACCATAT+TGG | 0.452926 | 7.3:-85676998 | None:intergenic |
| GAGAGTTTGGGAAAACGATC+TGG | 0.456073 | 7.3:+85679242 | MS.gene45228:CDS |
| AGCCATCTAGATACATTTGT+TGG | 0.456930 | 7.3:-85679155 | None:intergenic |
| ATAAGAATGAGCTTTCCATT+TGG | 0.457165 | 7.3:-85679104 | None:intergenic |
| GTAGCAGAGTGAGAGTTTAT+GGG | 0.457730 | 7.3:+85677220 | MS.gene45228:CDS |
| TATCATTGTCATCTATTTGT+GGG | 0.458069 | 7.3:-85676951 | None:intergenic |
| ATATCAACTTTGGTTGATGT+AGG | 0.461312 | 7.3:+85678296 | MS.gene45228:CDS |
| TTGATATTCCCTCAAATCCT+TGG | 0.462356 | 7.3:-85678280 | None:intergenic |
| CACTCTGCTACCATCATCAT+TGG | 0.471652 | 7.3:-85677208 | None:intergenic |
| TATCAACTTTGGTTGATGTA+GGG | 0.479740 | 7.3:+85678297 | MS.gene45228:CDS |
| AGAATGAGCTTTCCATTTGG+TGG | 0.481221 | 7.3:-85679101 | None:intergenic |
| TTTATTTGATATCATTGCTA+AGG | 0.484926 | 7.3:+85677044 | MS.gene45228:CDS |
| ATCAACTTTGGTTGATGTAG+GGG | 0.485080 | 7.3:+85678298 | MS.gene45228:CDS |
| GTATCATTGTCATCTATTTG+TGG | 0.485841 | 7.3:-85676952 | None:intergenic |
| ACACTCTCTGCTATGGTACT+TGG | 0.489061 | 7.3:+85676973 | MS.gene45228:CDS |
| ATTTGAGGGAATATCAACTT+TGG | 0.500220 | 7.3:+85678286 | MS.gene45228:CDS |
| AAGGAAAGTTCACATAATGA+TGG | 0.500299 | 7.3:+85677063 | MS.gene45228:CDS |
| TTTCTCTATCATTGGAGTGA+TGG | 0.521287 | 7.3:+85679295 | MS.gene45228:CDS |
| TAACTTTGAAGCAATTTCAA+AGG | 0.526373 | 7.3:-85677097 | None:intergenic |
| TCTAGATCTTCTGGTTGCAA+GGG | 0.529836 | 7.3:-85679131 | None:intergenic |
| AGGAGATGTCATAATGATCA+AGG | 0.530011 | 7.3:+85678560 | MS.gene45228:CDS |
| TACCACACCATTGACAAAGC+AGG | 0.536967 | 7.3:-85677324 | None:intergenic |
| TTAGGCATTGAATATGTTGG+AGG | 0.537928 | 7.3:+85678513 | MS.gene45228:intron |
| GTTTATGGGATCACACCATC+TGG | 0.539788 | 7.3:+85677234 | MS.gene45228:CDS |
| GAAGCAATTATTGATCCAGA+AGG | 0.539977 | 7.3:+85678125 | MS.gene45228:CDS |
| AAGCAATTATTGATCCAGAA+GGG | 0.545644 | 7.3:+85678126 | MS.gene45228:CDS |
| TTAAATATTTCATTTATCTG+TGG | 0.548437 | 7.3:-85678203 | None:intergenic |
| GGCAAATCAGAGTGTTGAGT+TGG | 0.551660 | 7.3:-85677120 | None:intergenic |
| AACATGATGTTTGTCACAGC+TGG | 0.557381 | 7.3:+85679191 | MS.gene45228:CDS |
| CAATGATACACTCTCTGCTA+TGG | 0.557805 | 7.3:+85676966 | MS.gene45228:CDS |
| GAAAATACACCACCTTGTCC+AGG | 0.565413 | 7.3:+85678404 | MS.gene45228:CDS |
| GTTTGTCACAGCTGGTGGAA+TGG | 0.572866 | 7.3:+85679199 | MS.gene45228:CDS |
| TTGACAAAATATTTACCAGA+TGG | 0.581272 | 7.3:-85677249 | None:intergenic |
| ATTGCAGCGTTAAGAACCGC+AGG | 0.587759 | 7.3:-85677012 | None:intergenic |
| ATCATTATGACATCTCCTTG+TGG | 0.589120 | 7.3:-85678555 | None:intergenic |
| TCTACTCGGACCAATGATGA+TGG | 0.591740 | 7.3:+85677198 | MS.gene45228:CDS |
| ACCACACCATTGACAAAGCA+GGG | 0.592656 | 7.3:-85677323 | None:intergenic |
| ATCATTGTCATCTATTTGTG+GGG | 0.602565 | 7.3:-85676950 | None:intergenic |
| ACCCTGCTTTGTCAATGGTG+TGG | 0.605546 | 7.3:+85677322 | MS.gene45228:CDS |
| ATGATGTTTGTCACAGCTGG+TGG | 0.606417 | 7.3:+85679194 | MS.gene45228:CDS |
| AATATTTAACAAATCAATGA+CGG | 0.613308 | 7.3:+85678217 | MS.gene45228:CDS |
| TCAACTTTGGTTGATGTAGG+GGG | 0.614546 | 7.3:+85678299 | MS.gene45228:CDS |
| AGCAATTATTGATCCAGAAG+GGG | 0.627732 | 7.3:+85678127 | MS.gene45228:CDS |
| AGAAATGGATTACCTGGACA+AGG | 0.660847 | 7.3:-85678416 | None:intergenic |
| TGCCAATATGGTGTTTCCTG+CGG | 0.681065 | 7.3:+85676996 | MS.gene45228:CDS |
| ATGTTTGAAAGTGTTCCACA+AGG | 0.690688 | 7.3:+85678540 | MS.gene45228:CDS |
| TGGAATGGAAAGAAGTGTGA+AGG | 0.698054 | 7.3:+85679214 | MS.gene45228:CDS |
| AATGGATTACCTGGACAAGG+TGG | 0.711936 | 7.3:-85678413 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATATTGGAAATTAAAA+TGG | - | chr7.3:85678470-85678489 | None:intergenic | 10.0% |
| !! | ATATTTACTTATTTAAATAC+TGG | + | chr7.3:85677571-85677590 | MS.gene45228:intron | 10.0% |
| !! | TAAAAAAATTGAATATTTGT+AGG | + | chr7.3:85677526-85677545 | MS.gene45228:intron | 10.0% |
| !!! | AAAATATTTTTATAATGTGT+AGG | + | chr7.3:85678090-85678109 | MS.gene45228:intron | 10.0% |
| !!! | AAACATTCTAAAAAATAAAT+AGG | + | chr7.3:85678716-85678735 | MS.gene45228:intron | 10.0% |
| !! | AAAATTTCCTAATTTCATTT+AGG | + | chr7.3:85678495-85678514 | MS.gene45228:intron | 15.0% |
| !! | AATATTTAACAAATCAATGA+CGG | + | chr7.3:85678217-85678236 | MS.gene45228:CDS | 15.0% |
| !! | ATCAAACTTATAAAATTTCA+TGG | - | chr7.3:85677837-85677856 | None:intergenic | 15.0% |
| !! | ATGTTGTGTATAATAAATTA+TGG | - | chr7.3:85677970-85677989 | None:intergenic | 15.0% |
| !! | CTCATTTATTAAAACTAATA+TGG | + | chr7.3:85678859-85678878 | MS.gene45228:intron | 15.0% |
| !! | TGTTGTGTATAATAAATTAT+GGG | - | chr7.3:85677969-85677988 | None:intergenic | 15.0% |
| !! | TTAAATATTTCATTTATCTG+TGG | - | chr7.3:85678206-85678225 | None:intergenic | 15.0% |
| !!! | ATTCTTCAGTTTTTAATTTT+TGG | - | chr7.3:85678935-85678954 | None:intergenic | 15.0% |
| !!! | ATTTCCTTTTAAAATATTAG+AGG | - | chr7.3:85678782-85678801 | None:intergenic | 15.0% |
| !!! | GATACATATAACAAATTTTT+AGG | - | chr7.3:85678816-85678835 | None:intergenic | 15.0% |
| !!! | TTTCCTTTTAAAATATTAGA+GGG | - | chr7.3:85678781-85678800 | None:intergenic | 15.0% |
| !! | AAAAATTATCACATGAGAAA+TGG | - | chr7.3:85678434-85678453 | None:intergenic | 20.0% |
| !! | AAATCGTGAATATAAATTGT+AGG | + | chr7.3:85677611-85677630 | MS.gene45228:intron | 20.0% |
| !! | AAATTAATTGCCTTTATTGA+TGG | - | chr7.3:85678365-85678384 | None:intergenic | 20.0% |
| !! | AATTAATTGCCTTTATTGAT+GGG | - | chr7.3:85678364-85678383 | None:intergenic | 20.0% |
| !! | ATATGGATGTATTAATTCTT+AGG | + | chr7.3:85678876-85678895 | MS.gene45228:intron | 20.0% |
| !! | ATGTAAAAACTAAAACTAGT+GGG | - | chr7.3:85678617-85678636 | None:intergenic | 20.0% |
| !! | CTACAATAACTAATATCATT+AGG | - | chr7.3:85677917-85677936 | None:intergenic | 20.0% |
| !! | CTTTAACAAAATCATTACAA+TGG | + | chr7.3:85677786-85677805 | MS.gene45228:intron | 20.0% |
| !! | TATGTAAAAACTAAAACTAG+TGG | - | chr7.3:85678618-85678637 | None:intergenic | 20.0% |
| !! | TTTATTTGATATCATTGCTA+AGG | + | chr7.3:85677044-85677063 | MS.gene45228:CDS | 20.0% |
| !!! | TAACATTATTTTTGTATCCT+TGG | + | chr7.3:85678992-85679011 | MS.gene45228:intron | 20.0% |
| !!! | TATTTTGTCAAGTATGAAAA+TGG | + | chr7.3:85677261-85677280 | MS.gene45228:CDS | 20.0% |
| ! | AAGAATTATGCTTTCATACA+TGG | - | chr7.3:85677417-85677436 | None:intergenic | 25.0% |
| ! | AGAATTATGCTTTCATACAT+GGG | - | chr7.3:85677416-85677435 | None:intergenic | 25.0% |
| ! | ATTCTCTTTATCATTGGTAT+AGG | - | chr7.3:85676911-85676930 | None:intergenic | 25.0% |
| ! | CTCACAAAAATAATAGTTCA+AGG | - | chr7.3:85677499-85677518 | None:intergenic | 25.0% |
| ! | CTTATAAAATTTCATGGAGT+AGG | - | chr7.3:85677831-85677850 | None:intergenic | 25.0% |
| ! | GAAAATGGTGATTCATATTT+GGG | + | chr7.3:85677276-85677295 | MS.gene45228:CDS | 25.0% |
| ! | GAGCAATAAAATATAATCCA+AGG | - | chr7.3:85679012-85679031 | None:intergenic | 25.0% |
| ! | GGATAAAAAAAACTAAGTTG+TGG | + | chr7.3:85678671-85678690 | MS.gene45228:intron | 25.0% |
| ! | TAAATTGACTACATCAATCA+AGG | - | chr7.3:85677369-85677388 | None:intergenic | 25.0% |
| ! | TAATATTAGGTTTCTGCTAT+CGG | - | chr7.3:85677641-85677660 | None:intergenic | 25.0% |
| ! | TATCATTGTCATCTATTTGT+GGG | - | chr7.3:85676954-85676973 | None:intergenic | 25.0% |
| ! | TGAAAATGGTGATTCATATT+TGG | + | chr7.3:85677275-85677294 | MS.gene45228:CDS | 25.0% |
| ! | TTCAATGCCTAAATGAAATT+AGG | - | chr7.3:85678505-85678524 | None:intergenic | 25.0% |
| ! | TTGACAAAATATTTACCAGA+TGG | - | chr7.3:85677252-85677271 | None:intergenic | 25.0% |
| !! | GGATTATATTTTATTGCTCT+AGG | + | chr7.3:85679013-85679032 | MS.gene45228:intron | 25.0% |
| !! | TATTTTCAATTACTTGTGGA+AGG | - | chr7.3:85678391-85678410 | None:intergenic | 25.0% |
| !!! | ACACCCTCTAATATTTTAAA+AGG | + | chr7.3:85678775-85678794 | MS.gene45228:intron | 25.0% |
| !!! | TAACTTTGAAGCAATTTCAA+AGG | - | chr7.3:85677100-85677119 | None:intergenic | 25.0% |
| AACCAACAAATGTATCTAGA+TGG | + | chr7.3:85679153-85679172 | MS.gene45228:CDS | 30.0% | |
| AAGCAATTATTGATCCAGAA+GGG | + | chr7.3:85678126-85678145 | MS.gene45228:CDS | 30.0% | |
| AAGGAAAGTTCACATAATGA+TGG | + | chr7.3:85677063-85677082 | MS.gene45228:CDS | 30.0% | |
| AATATTAGGTTTCTGCTATC+GGG | - | chr7.3:85677640-85677659 | None:intergenic | 30.0% | |
| AGAATCCTTGAAAAATACCA+AGG | + | chr7.3:85678263-85678282 | MS.gene45228:CDS | 30.0% | |
| AGCAGAAACCTAATATTAGA+TGG | + | chr7.3:85677643-85677662 | MS.gene45228:intron | 30.0% | |
| ATAAGAATGAGCTTTCCATT+TGG | - | chr7.3:85679107-85679126 | None:intergenic | 30.0% | |
| ATCATTGTCATCTATTTGTG+GGG | - | chr7.3:85676953-85676972 | None:intergenic | 30.0% | |
| ATTTGAGGGAATATCAACTT+TGG | + | chr7.3:85678286-85678305 | MS.gene45228:CDS | 30.0% | |
| CAAGTTATAACTAAATCGTG+TGG | + | chr7.3:85678650-85678669 | MS.gene45228:intron | 30.0% | |
| CACATGATTCTCTTTATCAT+TGG | - | chr7.3:85676917-85676936 | None:intergenic | 30.0% | |
| CTCTAAATACCCATCAATAA+AGG | + | chr7.3:85678352-85678371 | MS.gene45228:CDS | 30.0% | |
| GAAAAATACCAAGGATTTGA+GGG | + | chr7.3:85678272-85678291 | MS.gene45228:CDS | 30.0% | |
| GAATTCAAGGCTAAAAAACA+AGG | - | chr7.3:85678003-85678022 | None:intergenic | 30.0% | |
| GTATCATTGTCATCTATTTG+TGG | - | chr7.3:85676955-85676974 | None:intergenic | 30.0% | |
| TATATCAACAAGCTATTAGC+AGG | - | chr7.3:85678064-85678083 | None:intergenic | 30.0% | |
| TGAAAAATACCAAGGATTTG+AGG | + | chr7.3:85678271-85678290 | MS.gene45228:CDS | 30.0% | |
| ! | ACTTTTCATCTGACCAATTA+TGG | - | chr7.3:85679046-85679065 | None:intergenic | 30.0% |
| ! | ATATCAACTTTGGTTGATGT+AGG | + | chr7.3:85678296-85678315 | MS.gene45228:CDS | 30.0% |
| ! | CAAATCCTTGGTATTTTTCA+AGG | - | chr7.3:85678271-85678290 | None:intergenic | 30.0% |
| ! | GGTGTATTTTCAATTACTTG+TGG | - | chr7.3:85678395-85678414 | None:intergenic | 30.0% |
| ! | TATCAACTTTGGTTGATGTA+GGG | + | chr7.3:85678297-85678316 | MS.gene45228:CDS | 30.0% |
| !! | CATTTAGGCATTGAATATGT+TGG | + | chr7.3:85678510-85678529 | MS.gene45228:intron | 30.0% |
| !!! | AAGTTTTGAATTCAACAGAC+AGG | + | chr7.3:85677868-85677887 | MS.gene45228:intron | 30.0% |
| !!! | TTCCATGAACTTTTTTGAAC+AGG | - | chr7.3:85678154-85678173 | None:intergenic | 30.0% |
| AACATGTCGTCAAGAATTCA+AGG | - | chr7.3:85678016-85678035 | None:intergenic | 35.0% | |
| AAGGCTAAAAAACAAGGTCA+TGG | - | chr7.3:85677997-85678016 | None:intergenic | 35.0% | |
| AGCAATTATTGATCCAGAAG+GGG | + | chr7.3:85678127-85678146 | MS.gene45228:CDS | 35.0% | |
| AGCCATCTAGATACATTTGT+TGG | - | chr7.3:85679158-85679177 | None:intergenic | 35.0% | |
| AGGAGATGTCATAATGATCA+AGG | + | chr7.3:85678560-85678579 | MS.gene45228:CDS | 35.0% | |
| ATCAAGGTATGTGTGTGTAT+GGG | + | chr7.3:85678576-85678595 | MS.gene45228:intron | 35.0% | |
| ATCATTATGACATCTCCTTG+TGG | - | chr7.3:85678558-85678577 | None:intergenic | 35.0% | |
| CCTAATATTAGATGGTCCAA+CGG | + | chr7.3:85677651-85677670 | MS.gene45228:intron | 35.0% | |
| GAAGCAATTATTGATCCAGA+AGG | + | chr7.3:85678125-85678144 | MS.gene45228:CDS | 35.0% | |
| GACCTGTTCAAAAAAGTTCA+TGG | + | chr7.3:85678149-85678168 | MS.gene45228:CDS | 35.0% | |
| GTGAAGGAATATGAGAGTTT+GGG | + | chr7.3:85679230-85679249 | MS.gene45228:CDS | 35.0% | |
| TAGCCGCTAAGTTTGAATAT+GGG | + | chr7.3:85677934-85677953 | MS.gene45228:intron | 35.0% | |
| TCACCCATATTCAAACTTAG+CGG | - | chr7.3:85677940-85677959 | None:intergenic | 35.0% | |
| TGTCTTGCTTTCTCTATCAT+TGG | + | chr7.3:85679287-85679306 | MS.gene45228:CDS | 35.0% | |
| TGTGAAGGAATATGAGAGTT+TGG | + | chr7.3:85679229-85679248 | MS.gene45228:CDS | 35.0% | |
| TTGATATTCCCTCAAATCCT+TGG | - | chr7.3:85678283-85678302 | None:intergenic | 35.0% | |
| TTTCTCTATCATTGGAGTGA+TGG | + | chr7.3:85679295-85679314 | MS.gene45228:CDS | 35.0% | |
| ! | ATCAACTTTGGTTGATGTAG+GGG | + | chr7.3:85678298-85678317 | MS.gene45228:CDS | 35.0% |
| !! | ATGTTTGAAAGTGTTCCACA+AGG | + | chr7.3:85678540-85678559 | MS.gene45228:CDS | 35.0% |
| !! | CCAACGGATTTTAGAAATCA+TGG | + | chr7.3:85677667-85677686 | MS.gene45228:intron | 35.0% |
| !! | CCATGATTTCTAAAATCCGT+TGG | - | chr7.3:85677670-85677689 | None:intergenic | 35.0% |
| !! | TTAGGCATTGAATATGTTGG+AGG | + | chr7.3:85678513-85678532 | MS.gene45228:intron | 35.0% |
| !! | TTTGTTGGTTCTAGATCTTC+TGG | - | chr7.3:85679143-85679162 | None:intergenic | 35.0% |
| AACATACGATCGAGCCTATT+CGG | - | chr7.3:85677144-85677163 | None:intergenic | 40.0% | |
| AACATGATGTTTGTCACAGC+TGG | + | chr7.3:85679191-85679210 | MS.gene45228:CDS | 40.0% | |
| AGAATGAGCTTTCCATTTGG+TGG | - | chr7.3:85679104-85679123 | None:intergenic | 40.0% | |
| CAATGATACACTCTCTGCTA+TGG | + | chr7.3:85676966-85676985 | MS.gene45228:CDS | 40.0% | |
| CCGTTGGACCATCTAATATT+AGG | - | chr7.3:85677654-85677673 | None:intergenic | 40.0% | |
| CTCGGACATGAGTTTATAAG+TGG | - | chr7.3:85677742-85677761 | None:intergenic | 40.0% | |
| GATCAAGGTATGTGTGTGTA+TGG | + | chr7.3:85678575-85678594 | MS.gene45228:intron | 40.0% | |
| GGACATGAGTTTATAAGTGG+AGG | - | chr7.3:85677739-85677758 | None:intergenic | 40.0% | |
| GTAGCAGAGTGAGAGTTTAT+GGG | + | chr7.3:85677220-85677239 | MS.gene45228:CDS | 40.0% | |
| GTAGCCGCTAAGTTTGAATA+TGG | + | chr7.3:85677933-85677952 | MS.gene45228:intron | 40.0% | |
| TACAAAGCTTTGCCACCAAA+TGG | + | chr7.3:85679089-85679108 | MS.gene45228:CDS | 40.0% | |
| ! | AACACTCTGATTTGCCGAAT+AGG | + | chr7.3:85677127-85677146 | MS.gene45228:CDS | 40.0% |
| ! | TCAACTTTGGTTGATGTAGG+GGG | + | chr7.3:85678299-85678318 | MS.gene45228:CDS | 40.0% |
| ! | TCTAGATCTTCTGGTTGCAA+GGG | - | chr7.3:85679134-85679153 | None:intergenic | 40.0% |
| ! | TGGAATGGAAAGAAGTGTGA+AGG | + | chr7.3:85679214-85679233 | MS.gene45228:CDS | 40.0% |
| ! | TTCTAGATCTTCTGGTTGCA+AGG | - | chr7.3:85679135-85679154 | None:intergenic | 40.0% |
| !! | AGAAATGGATTACCTGGACA+AGG | - | chr7.3:85678419-85678438 | None:intergenic | 40.0% |
| !! | CACATGAGAAATGGATTACC+TGG | - | chr7.3:85678425-85678444 | None:intergenic | 40.0% |
| !! | CTCTTCTGTCTGTTTCTACT+CGG | + | chr7.3:85677184-85677203 | MS.gene45228:CDS | 40.0% |
| !! | TATGGTACTTGGTGCCAATA+TGG | + | chr7.3:85676984-85677003 | MS.gene45228:CDS | 40.0% |
| AACCGCAGGAAACACCATAT+TGG | - | chr7.3:85677001-85677020 | None:intergenic | 45.0% | |
| ACACTCTCTGCTATGGTACT+TGG | + | chr7.3:85676973-85676992 | MS.gene45228:CDS | 45.0% | |
| ACCACACCATTGACAAAGCA+GGG | - | chr7.3:85677326-85677345 | None:intergenic | 45.0% | |
| ATGATGTTTGTCACAGCTGG+TGG | + | chr7.3:85679194-85679213 | MS.gene45228:CDS | 45.0% | |
| CACTCTGCTACCATCATCAT+TGG | - | chr7.3:85677211-85677230 | None:intergenic | 45.0% | |
| GAAAATACACCACCTTGTCC+AGG | + | chr7.3:85678404-85678423 | MS.gene45228:CDS | 45.0% | |
| GAGAGTTTGGGAAAACGATC+TGG | + | chr7.3:85679242-85679261 | MS.gene45228:CDS | 45.0% | |
| GCATCAGATCAAAGATGGCT+CGG | - | chr7.3:85677760-85677779 | None:intergenic | 45.0% | |
| GGTAGCAGAGTGAGAGTTTA+TGG | + | chr7.3:85677219-85677238 | MS.gene45228:CDS | 45.0% | |
| GTAATCCTCACCTCACAAGT+CGG | - | chr7.3:85677717-85677736 | None:intergenic | 45.0% | |
| GTCTCGCATCAGATCAAAGA+TGG | - | chr7.3:85677765-85677784 | None:intergenic | 45.0% | |
| GTTTATGGGATCACACCATC+TGG | + | chr7.3:85677234-85677253 | MS.gene45228:CDS | 45.0% | |
| TACCACACCATTGACAAAGC+AGG | - | chr7.3:85677327-85677346 | None:intergenic | 45.0% | |
| TCTACTCGGACCAATGATGA+TGG | + | chr7.3:85677198-85677217 | MS.gene45228:CDS | 45.0% | |
| TCTAGGCTGTCAGCCATAAT+TGG | + | chr7.3:85679030-85679049 | MS.gene45228:intron | 45.0% | |
| TGCCAATATGGTGTTTCCTG+CGG | + | chr7.3:85676996-85677015 | MS.gene45228:CDS | 45.0% | |
| ! | TTTTTGAACAGGTCCCCTTC+TGG | - | chr7.3:85678143-85678162 | None:intergenic | 45.0% |
| !! | AATGGATTACCTGGACAAGG+TGG | - | chr7.3:85678416-85678435 | None:intergenic | 45.0% |
| !! | GGCAAATCAGAGTGTTGAGT+TGG | - | chr7.3:85677123-85677142 | None:intergenic | 45.0% |
| !!! | AAATTTTCAATTAATAATAT+TGG | - | chr7.3:85678482-85678501 | None:intergenic | 5.0% |
| ACCCTGCTTTGTCAATGGTG+TGG | + | chr7.3:85677322-85677341 | MS.gene45228:CDS | 50.0% | |
| ATTGCAGCGTTAAGAACCGC+AGG | - | chr7.3:85677015-85677034 | None:intergenic | 50.0% | |
| GTCTCACCCTGCTTTGTCAA+TGG | + | chr7.3:85677317-85677336 | MS.gene45228:CDS | 50.0% | |
| GTTTGTCACAGCTGGTGGAA+TGG | + | chr7.3:85679199-85679218 | MS.gene45228:CDS | 50.0% | |
| ! | ACCTCACAAGTCGGTTTCGT+GGG | - | chr7.3:85677708-85677727 | None:intergenic | 50.0% |
| ! | ACTTTGGTTGATGTAGGGGG+TGG | + | chr7.3:85678302-85678321 | MS.gene45228:CDS | 50.0% |
| GTTGATGTAGGGGGTGGAAC+TGG | + | chr7.3:85678308-85678327 | MS.gene45228:CDS | 55.0% | |
| ! | CACCTCACAAGTCGGTTTCG+TGG | - | chr7.3:85677709-85677728 | None:intergenic | 55.0% |
| ! | CCTCACAAGTCGGTTTCGTG+GGG | - | chr7.3:85677707-85677726 | None:intergenic | 55.0% |
| !! | CGAAACCGACTTGTGAGGTG+AGG | + | chr7.3:85677709-85677728 | MS.gene45228:intron | 55.0% |
| !! | CCCCACGAAACCGACTTGTG+AGG | + | chr7.3:85677704-85677723 | MS.gene45228:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 85676904 | 85679331 | 85676904 | ID=MS.gene45228 |
| chr7.3 | mRNA | 85676904 | 85679331 | 85676904 | ID=MS.gene45228.t1;Parent=MS.gene45228 |
| chr7.3 | exon | 85676904 | 85677343 | 85676904 | ID=MS.gene45228.t1.exon1;Parent=MS.gene45228.t1 |
| chr7.3 | CDS | 85676904 | 85677343 | 85676904 | ID=cds.MS.gene45228.t1;Parent=MS.gene45228.t1 |
| chr7.3 | exon | 85678112 | 85678425 | 85678112 | ID=MS.gene45228.t1.exon2;Parent=MS.gene45228.t1 |
| chr7.3 | CDS | 85678112 | 85678425 | 85678112 | ID=cds.MS.gene45228.t1;Parent=MS.gene45228.t1 |
| chr7.3 | exon | 85678517 | 85678581 | 85678517 | ID=MS.gene45228.t1.exon3;Parent=MS.gene45228.t1 |
| chr7.3 | CDS | 85678517 | 85678581 | 85678517 | ID=cds.MS.gene45228.t1;Parent=MS.gene45228.t1 |
| chr7.3 | exon | 85679035 | 85679331 | 85679035 | ID=MS.gene45228.t1.exon4;Parent=MS.gene45228.t1 |
| chr7.3 | CDS | 85679035 | 85679331 | 85679035 | ID=cds.MS.gene45228.t1;Parent=MS.gene45228.t1 |
| Gene Sequence |
| Protein sequence |
