AlfalfaGEDB | MS.gene45456

M. sativa cultivar XinJiangDaYe / MS.gene45456

KEGG: -
GO: GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070647 GO:0071704 GO:0140096 GO:1901564
PFAM: PF04564.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45456.t1	RHN79430.1	96.4	441	12	2	1	441	1	437	4.70E-232	813.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45456.t1	Q9SVC6	53.9	445	187	6	1	438	1	434	2.3e-123	443.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45456.t1	A0A396JMB5	96.4	441	12	2	1	441	1	437	3.4e-232	813.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049281	MS.gene45456	0.81352	2.46E-51	-1.69E-46
MS.gene050381	MS.gene45456	0.827845	1.25E-54	-1.69E-46
MS.gene050883	MS.gene45456	0.809986	1.44E-50	-1.69E-46
MS.gene051044	MS.gene45456	0.838291	3.14E-57	-1.69E-46
MS.gene051127	MS.gene45456	0.823873	1.10E-53	-1.69E-46
MS.gene051138	MS.gene45456	0.828469	8.84E-55	-1.69E-46
MS.gene051946	MS.gene45456	0.806971	6.35E-50	-1.69E-46
MS.gene053420	MS.gene45456	0.805837	1.10E-49	-1.69E-46
MS.gene053488	MS.gene45456	0.814937	1.19E-51	-1.69E-46
MS.gene053561	MS.gene45456	0.814678	1.36E-51	-1.69E-46
MS.gene053887	MS.gene45456	0.836991	6.76E-57	-1.69E-46
MS.gene054056	MS.gene45456	0.802054	6.73E-49	-1.69E-46
MS.gene054708	MS.gene45456	0.805061	1.60E-49	-1.69E-46
MS.gene054959	MS.gene45456	0.80279	4.75E-49	-1.69E-46
MS.gene055124	MS.gene45456	0.819652	1.04E-52	-1.69E-46
MS.gene055154	MS.gene45456	0.804445	2.15E-49	-1.69E-46
MS.gene055202	MS.gene45456	0.80405	2.60E-49	-1.69E-46
MS.gene055942	MS.gene45456	0.803028	4.24E-49	-1.69E-46
MS.gene056224	MS.gene45456	0.810465	1.14E-50	-1.69E-46
MS.gene057014	MS.gene45456	0.815119	1.09E-51	-1.69E-46
MS.gene058099	MS.gene45456	0.823906	1.08E-53	-1.69E-46
MS.gene058109	MS.gene45456	0.801798	7.60E-49	-1.69E-46
MS.gene058171	MS.gene45456	0.808254	3.39E-50	-1.69E-46
MS.gene058173	MS.gene45456	0.80174	7.81E-49	-1.69E-46
MS.gene058175	MS.gene45456	0.810525	1.10E-50	-1.69E-46
MS.gene058603	MS.gene45456	0.803049	4.20E-49	-1.69E-46
MS.gene058628	MS.gene45456	0.802144	6.45E-49	-1.69E-46
MS.gene058629	MS.gene45456	0.803956	2.72E-49	-1.69E-46
MS.gene058630	MS.gene45456	0.808206	3.47E-50	-1.69E-46
MS.gene059690	MS.gene45456	0.837774	4.26E-57	-1.69E-46
MS.gene059691	MS.gene45456	0.83174	1.41E-55	-1.69E-46
MS.gene059694	MS.gene45456	0.845034	5.22E-59	-1.69E-46
MS.gene059697	MS.gene45456	0.850088	2.13E-60	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene45456	MS.gene061546	PPI
MS.gene45456	MS.gene022190	PPI
MS.gene41035	MS.gene45456	PPI
MS.gene45456	MS.gene008306	PPI
MS.gene45456	MS.gene41036	PPI
MS.gene45456	MS.gene93972	PPI
MS.gene45456	MS.gene41211	PPI
MS.gene45456	MS.gene04998	PPI
MS.gene45456	MS.gene064492	PPI
MS.gene45456	MS.gene26139	PPI
MS.gene45456	MS.gene071765	PPI
MS.gene066125	MS.gene45456	PPI
MS.gene45456	MS.gene72611	PPI
MS.gene45456	MS.gene061543	PPI
MS.gene45456	MS.gene048677	PPI
MS.gene45456	MS.gene017373	PPI
MS.gene45456	MS.gene042912	PPI
MS.gene45456	MS.gene034756	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45456.t1	MTR_1g056880	95.692	441	15	2	1	441	1	437	0.0	858
MS.gene45456.t1	MTR_1g056870	94.104	441	22	2	1	441	1	437	0.0	826
MS.gene45456.t1	MTR_1g056840	89.342	441	17	3	1	441	1	411	0.0	775
MS.gene45456.t1	MTR_7g106340	65.455	440	128	7	1	438	1	418	0.0	556
MS.gene45456.t1	MTR_2g087350	54.483	435	164	5	4	438	3	403	2.27e-152	438
MS.gene45456.t1	MTR_1g056910	40.972	432	215	8	4	430	3	399	3.54e-104	315
MS.gene45456.t1	MTR_4g051515	37.188	441	238	8	4	437	3	411	4.00e-92	285
MS.gene45456.t1	MTR_3g065080	33.113	453	237	12	3	437	32	436	1.94e-59	201
MS.gene45456.t1	MTR_5g077510	33.257	436	242	15	4	429	32	428	1.04e-53	186
MS.gene45456.t1	MTR_5g048050	30.769	429	252	11	2	418	20	415	5.47e-51	178
MS.gene45456.t1	MTR_6g071340	30.476	420	247	11	11	418	9	395	3.43e-50	176
MS.gene45456.t1	MTR_4g085720	30.841	428	249	11	1	423	8	393	1.88e-45	163
MS.gene45456.t1	MTR_8g092870	28.507	442	270	12	5	431	8	418	4.36e-34	132
MS.gene45456.t1	MTR_3g095730	27.991	443	269	12	5	431	11	419	2.50e-30	122
MS.gene45456.t1	MTR_4g063800	24.942	429	264	13	11	430	259	638	1.27e-26	113
MS.gene45456.t1	MTR_7g059405	27.206	408	253	15	11	418	268	631	1.94e-26	112
MS.gene45456.t1	MTR_4g485520	27.586	319	169	9	11	315	109	379	3.02e-25	108
MS.gene45456.t1	MTR_4g485520	27.586	319	169	9	11	315	277	547	4.63e-25	108
MS.gene45456.t1	MTR_3g096370	26.512	430	267	15	4	423	7	397	7.39e-25	106
MS.gene45456.t1	MTR_5g015210	25.891	421	264	9	6	426	66	438	2.51e-24	105
MS.gene45456.t1	MTR_2g018010	28.261	322	166	11	11	313	296	571	7.91e-24	104
MS.gene45456.t1	MTR_7g078330	27.796	313	169	11	11	315	278	541	2.07e-23	103
MS.gene45456.t1	MTR_4g107010	27.553	421	250	18	11	418	284	662	1.52e-21	98.2
MS.gene45456.t1	MTR_5g083030	25.833	360	190	12	11	342	297	607	2.75e-21	97.1
MS.gene45456.t1	MTR_1g094215	28.152	341	184	13	11	339	68	359	2.31e-20	93.6
MS.gene45456.t1	MTR_1g094215	28.152	341	184	13	11	339	251	542	7.70e-20	92.4
MS.gene45456.t1	MTR_3g085610	25.427	468	284	18	13	441	286	727	4.31e-19	90.5
MS.gene45456.t1	MTR_3g078160	25.659	417	261	15	11	418	279	655	1.64e-18	88.6
MS.gene45456.t1	MTR_3g078160	25.481	416	263	14	11	418	279	655	2.08e-18	88.2
MS.gene45456.t1	MTR_5g034440	27.100	369	234	13	11	375	284	621	3.10e-18	87.8
MS.gene45456.t1	MTR_4g091880	26.764	411	244	13	11	418	9	365	7.77e-18	85.1
MS.gene45456.t1	MTR_8g080280	27.273	451	252	22	13	418	288	707	3.02e-17	84.7
MS.gene45456.t1	MTR_4g028960	34.197	193	89	8	2	169	273	452	3.29e-17	84.7
MS.gene45456.t1	MTR_7g097020	45.679	81	37	2	5	85	239	312	1.44e-16	82.8
MS.gene45456.t1	MTR_1g069845	47.945	73	31	2	9	81	126	191	5.92e-16	80.5
MS.gene45456.t1	MTR_7g053260	42.500	80	39	2	1	80	72	144	8.72e-16	79.7
MS.gene45456.t1	MTR_7g116600	45.745	94	40	4	11	104	82	164	9.08e-16	79.7
MS.gene45456.t1	MTR_1g069845	45.455	77	35	2	5	81	243	312	1.07e-15	80.1
MS.gene45456.t1	MTR_1g069845	45.455	77	35	2	5	81	239	308	1.12e-15	79.7
MS.gene45456.t1	MTR_4g091880	24.818	411	224	13	11	418	9	337	4.13e-15	76.6
MS.gene45456.t1	MTR_1g017770	50.649	77	30	3	5	80	42	111	6.19e-15	77.0
MS.gene45456.t1	MTR_2g011140	25.466	322	188	10	13	330	21	294	1.22e-14	75.5
MS.gene45456.t1	MTR_8g077205	44.086	93	39	4	5	95	159	240	1.32e-14	76.3
MS.gene45456.t1	MTR_3g115670	25.352	213	121	5	11	207	34	224	1.71e-14	76.3
MS.gene45456.t1	MTR_8g077205	44.086	93	39	4	5	95	271	352	1.82e-14	76.3
MS.gene45456.t1	MTR_3g078160	46.154	91	41	3	11	100	279	362	5.25e-14	74.3
MS.gene45456.t1	MTR_5g020570	42.857	98	41	6	1	95	265	350	1.78e-13	73.2
MS.gene45456.t1	MTR_5g020570	42.857	98	41	6	1	95	280	365	2.18e-13	72.8
MS.gene45456.t1	MTR_8g103227	39.326	89	40	3	11	99	399	473	6.39e-13	71.6
MS.gene45456.t1	MTR_3g466220	41.667	84	42	2	2	85	228	304	7.14e-13	71.2
MS.gene45456.t1	MTR_3g466220	41.667	84	42	2	2	85	207	283	7.57e-13	71.2
MS.gene45456.t1	MTR_1g079450	39.560	91	44	4	5	95	61	140	1.61e-12	69.3
MS.gene45456.t1	MTR_1g090320	43.243	74	36	2	11	84	517	584	1.78e-12	70.1
MS.gene45456.t1	MTR_1g090320	43.243	74	36	2	11	84	519	586	1.83e-12	70.1
MS.gene45456.t1	MTR_7g117890	41.667	84	42	2	2	85	250	326	6.52e-12	68.2
MS.gene45456.t1	MTR_2g096850	37.500	80	43	2	1	80	583	655	6.13e-11	65.1
MS.gene45456.t1	MTR_2g096850	37.500	80	43	2	1	80	734	806	7.45e-11	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45456.t1	AT3G52450	54.054	444	188	6	1	438	1	434	1.03e-159	458
MS.gene45456.t1	AT2G35930	50.905	442	176	5	1	438	6	410	1.52e-155	447
MS.gene45456.t1	AT3G11840	35.169	472	234	12	3	435	6	444	1.14e-79	254
MS.gene45456.t1	AT3G19380	32.949	434	239	10	1	423	8	400	1.05e-49	174
MS.gene45456.t1	AT5G37490	30.575	435	253	14	4	429	28	422	1.94e-48	171
MS.gene45456.t1	AT1G66160	29.977	427	240	14	4	421	30	406	3.84e-43	157
MS.gene45456.t1	AT1G49780	30.926	443	259	11	1	432	8	414	4.09e-43	157
MS.gene45456.t1	AT1G66160	27.400	427	235	15	4	421	30	390	1.52e-30	122
MS.gene45456.t1	AT5G09800	28.929	439	252	15	10	431	14	409	5.07e-29	118
MS.gene45456.t1	AT1G23030	26.555	418	249	14	11	422	245	610	1.85e-28	118
MS.gene45456.t1	AT3G18710	27.765	443	267	11	5	431	10	415	3.38e-28	115
MS.gene45456.t1	AT2G28830	27.273	440	245	18	2	421	178	562	6.31e-28	116
MS.gene45456.t1	AT5G42340	29.730	296	165	8	11	306	294	546	4.25e-25	108
MS.gene45456.t1	AT3G46510	26.241	423	266	16	2	421	250	629	2.45e-24	106
MS.gene45456.t1	AT1G71020	26.761	426	247	14	11	422	99	473	5.65e-24	104
MS.gene45456.t1	AT1G71020	26.761	426	247	14	11	422	247	621	6.98e-24	105
MS.gene45456.t1	AT3G54850	27.523	327	168	12	7	316	248	522	1.10e-23	104
MS.gene45456.t1	AT5G64660	26.281	449	273	13	5	431	8	420	1.77e-23	102
MS.gene45456.t1	AT3G49810	24.703	421	269	9	6	426	63	435	2.23e-22	99.4
MS.gene45456.t1	AT5G65920	24.823	423	266	10	6	426	59	431	4.90e-22	98.6
MS.gene45456.t1	AT5G65920	24.823	423	266	10	6	426	59	431	4.90e-22	98.6
MS.gene45456.t1	AT1G29340	27.245	323	179	9	5	313	303	583	5.55e-20	93.2
MS.gene45456.t1	AT1G67530	26.106	452	263	14	13	418	278	704	8.98e-20	92.8
MS.gene45456.t1	AT1G67530	26.106	452	263	14	13	418	278	704	8.98e-20	92.8
MS.gene45456.t1	AT1G67530	26.106	452	263	14	13	418	278	704	8.98e-20	92.8
MS.gene45456.t1	AT5G01830	26.433	314	177	11	4	308	271	539	3.00e-18	87.8
MS.gene45456.t1	AT1G10560	26.582	316	177	11	11	313	292	565	4.82e-18	87.4
MS.gene45456.t1	AT1G67530	48.352	91	35	4	13	103	278	356	1.68e-17	85.1
MS.gene45456.t1	AT1G24330	25.000	444	274	17	13	418	281	703	3.66e-17	84.7
MS.gene45456.t1	AT1G24330	25.000	444	274	17	13	418	281	703	3.66e-17	84.7
MS.gene45456.t1	AT1G27910	48.235	85	33	4	13	97	285	358	2.56e-16	82.0
MS.gene45456.t1	AT4G21350	25.449	334	198	9	11	342	9	293	4.83e-16	79.7
MS.gene45456.t1	AT3G54790	43.750	80	38	2	5	84	200	272	1.54e-14	76.3
MS.gene45456.t1	AT3G54790	43.750	80	38	2	5	84	236	308	2.01e-14	76.3
MS.gene45456.t1	AT3G54790	43.750	80	38	2	5	84	236	308	2.01e-14	76.3
MS.gene45456.t1	AT3G07360	48.000	75	32	2	11	85	78	145	2.19e-14	75.5
MS.gene45456.t1	AT2G23140	38.776	98	49	3	11	108	237	323	2.47e-13	72.8
MS.gene45456.t1	AT2G23140	38.776	98	49	3	11	108	234	320	2.56e-13	72.8
MS.gene45456.t1	AT2G23140	38.776	98	49	3	11	108	234	320	2.56e-13	72.8
MS.gene45456.t1	AT2G23140	38.776	98	49	3	11	108	45	131	2.66e-13	72.4
MS.gene45456.t1	AT2G23140	38.776	98	49	3	11	108	45	131	2.66e-13	72.4
MS.gene45456.t1	AT3G02840	23.714	350	220	10	83	417	34	351	3.47e-13	71.2
MS.gene45456.t1	AT1G60190	23.611	360	210	12	13	354	284	596	4.78e-13	71.6
MS.gene45456.t1	AT1G01660	39.474	76	39	2	10	85	500	568	1.55e-12	69.7
MS.gene45456.t1	AT1G01660	39.474	76	39	2	10	85	501	569	1.57e-12	69.7
MS.gene45456.t1	AT2G45920	40.244	82	42	2	6	87	324	398	8.68e-12	67.0
MS.gene45456.t1	AT5G67340	32.283	127	74	4	5	128	238	355	1.31e-11	67.0
MS.gene45456.t1	AT5G67340	32.283	127	74	4	5	128	238	355	1.31e-11	67.0
MS.gene45456.t1	AT1G01680	40.260	77	39	2	11	87	237	306	1.70e-11	65.5
MS.gene45456.t1	AT5G18340	35.833	120	58	5	5	117	72	179	8.42e-11	64.3

Find 48 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGAATCAGAAGCTTCTTTA+AGG	0.127606	1.2:-44857489	None:intergenic
TTAATTCAACTCGTCGAATT+TGG	0.147235	1.2:+44858027	MS.gene45456:CDS
TTGATGCTTTCTTTGATATC+TGG	0.244295	1.2:-44857987	None:intergenic
TTCATGAGTTGTAGTGAAAT+AGG	0.280796	1.2:-44857208	None:intergenic
TGCACCATGAATTCTTCTTA+TGG	0.299615	1.2:+44857409	MS.gene45456:CDS
TATGAAGCAAGTAAATTAAA+AGG	0.308972	1.2:-44858456	None:intergenic
TTTAGATTGGCTAGCTTTGT+TGG	0.343021	1.2:-44857925	None:intergenic
TTTAATGAAATTATTGCAAA+AGG	0.350602	1.2:+44857840	MS.gene45456:CDS
GAAGCCATGTGAGATGATTT+TGG	0.361012	1.2:+44858125	MS.gene45456:CDS
GTTCAAGAAATGTTACGAAT+TGG	0.378143	1.2:+44858318	MS.gene45456:CDS
TATTGTTGCTAAGCTTTGTT+TGG	0.378678	1.2:+44858341	MS.gene45456:CDS
TTAAATTGCATTCAAAGTCT+TGG	0.383883	1.2:+44858415	MS.gene45456:CDS
ATGCCTGTTGAGACAGTAAC+TGG	0.387709	1.2:-44857235	None:intergenic
GATTCCATAAGAAGAATTCA+TGG	0.398042	1.2:-44857413	None:intergenic
AGAGTAAAAGCAATTGAATC+AGG	0.420580	1.2:+44858057	MS.gene45456:CDS
TCATGAGTTGTAGTGAAATA+GGG	0.428583	1.2:-44857207	None:intergenic
TTCTTCTTGATTGCAAAGAA+AGG	0.442698	1.2:+44858103	MS.gene45456:CDS
TTTGATGATGATGATGTTGA+AGG	0.466030	1.2:+44857694	MS.gene45456:CDS
GATCCAGTTACTGTCTCAAC+AGG	0.466859	1.2:+44857232	MS.gene45456:CDS
AATTCATGGTGCACCATGCT+TGG	0.475436	1.2:-44857399	None:intergenic
TTAATGAAATTATTGCAAAA+GGG	0.500255	1.2:+44857841	MS.gene45456:CDS
TTGGTTCTTCAAGTTGATAG+TGG	0.510674	1.2:+44858360	MS.gene45456:CDS
AGTCTACGAAGAGTGTGGTT+TGG	0.516469	1.2:-44857373	None:intergenic
ATGTTATGTCAATGTGCTGA+TGG	0.528834	1.2:+44858159	MS.gene45456:CDS
ACAAGGCAAAGGAGAAAGCA+AGG	0.529082	1.2:+44858385	MS.gene45456:CDS
CTTGCTTCATACCCAACAAG+TGG	0.530068	1.2:+44858468	MS.gene45456:CDS
AGGGTTTGGATAAGTAAATG+AGG	0.542957	1.2:-44857520	None:intergenic
GAACTCTTAAGCCATGGATG+TGG	0.556866	1.2:+44858189	MS.gene45456:CDS
CTGATAATTGAAGATTGTAA+AGG	0.558747	1.2:-44857765	None:intergenic
ATTCTTCTTATGGAATCGAA+AGG	0.560631	1.2:+44857419	MS.gene45456:CDS
AGATTTGAACTCTTAAGCCA+TGG	0.566041	1.2:+44858183	MS.gene45456:CDS
TTCGATGCTTTCTCTGTCGT+AGG	0.572900	1.2:-44857260	None:intergenic
TCAAGTTGATAGTGGAAACA+AGG	0.581380	1.2:+44858368	MS.gene45456:CDS
TTCATCTTCATGTTCAACAA+CGG	0.581699	1.2:+44857654	MS.gene45456:CDS
TATTTCACTACAACTCATGA+AGG	0.582520	1.2:+44857210	MS.gene45456:CDS
CAAGGCAAAGGAGAAAGCAA+GGG	0.602241	1.2:+44858386	MS.gene45456:CDS
AATCTTCAATTATCAGAACA+AGG	0.603602	1.2:+44857772	MS.gene45456:CDS
CAATAGCTAAACCACATCCA+TGG	0.618916	1.2:-44858200	None:intergenic
TTCGTAGACTCATCCAAGCA+TGG	0.622209	1.2:+44857386	MS.gene45456:CDS
CCGTCGATTTGACTCACTCT+CGG	0.622821	1.2:-44857566	None:intergenic
TGATAGTGGAAACAAGGCAA+AGG	0.625172	1.2:+44858374	MS.gene45456:CDS
CGACGGTGTATTGAATCCGC+CGG	0.626734	1.2:+44857583	MS.gene45456:CDS
TGCTAAGAACTCGACTGCAC+CGG	0.636230	1.2:-44857602	None:intergenic
TAAGAACTCGACTGCACCGG+CGG	0.639994	1.2:-44857599	None:intergenic
GGATGAGTCTACGAAGAGTG+TGG	0.646535	1.2:-44857378	None:intergenic
AGCACCAAAATCATCTCACA+TGG	0.654659	1.2:-44858129	None:intergenic
CCGAGAGTGAGTCAAATCGA+CGG	0.693824	1.2:+44857566	MS.gene45456:CDS
TGGCTAATGATAGAGCTGTG+AGG	0.767301	1.2:+44858253	MS.gene45456:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTAATGAAATTATTGCAAAA+GGG	+	chr1.2:44857841-44857860	MS.gene45456:CDS	15.0%
!!	TTTAATGAAATTATTGCAAA+AGG	+	chr1.2:44857840-44857859	MS.gene45456:CDS	15.0%
!!	TATGAAGCAAGTAAATTAAA+AGG	-	chr1.2:44858459-44858478	None:intergenic	20.0%
!!!	AATTGTTTTGAGCTTTTTTA+GGG	-	chr1.2:44857542-44857561	None:intergenic	20.0%
!	AATCTTCAATTATCAGAACA+AGG	+	chr1.2:44857772-44857791	MS.gene45456:CDS	25.0%
!	CTGATAATTGAAGATTGTAA+AGG	-	chr1.2:44857768-44857787	None:intergenic	25.0%
!	TTAAATTGCATTCAAAGTCT+TGG	+	chr1.2:44858415-44858434	MS.gene45456:CDS	25.0%
!!	TGTTTCAAAGAAGATTTTGA+GGG	+	chr1.2:44858221-44858240	MS.gene45456:CDS	25.0%
!!	TTGTTTCAAAGAAGATTTTG+AGG	+	chr1.2:44858220-44858239	MS.gene45456:CDS	25.0%
!!!	ATTCTCCATTTTTGAAGTTT+AGG	-	chr1.2:44857810-44857829	None:intergenic	25.0%
!!!	CAATTGTTTTGAGCTTTTTT+AGG	-	chr1.2:44857543-44857562	None:intergenic	25.0%
!!!	TTTGCTTTTGACTTCAAAAT+AGG	+	chr1.2:44857718-44857737	MS.gene45456:CDS	25.0%
	AAAAAACTCGGTCTTTAGAT+TGG	-	chr1.2:44857941-44857960	None:intergenic	30.0%
	AACTAACTCGACAAAAAACT+CGG	-	chr1.2:44857953-44857972	None:intergenic	30.0%
	AAGAATCAGAAGCTTCTTTA+AGG	-	chr1.2:44857492-44857511	None:intergenic	30.0%
	ACTCTCCTAAACTTCAAAAA+TGG	+	chr1.2:44857802-44857821	MS.gene45456:CDS	30.0%
	AGAGTAAAAGCAATTGAATC+AGG	+	chr1.2:44858057-44858076	MS.gene45456:CDS	30.0%
	ATTCTTCTTATGGAATCGAA+AGG	+	chr1.2:44857419-44857438	MS.gene45456:CDS	30.0%
	GAAATAGGGCAAAGAAAAAA+TGG	-	chr1.2:44857196-44857215	None:intergenic	30.0%
	GATTCCATAAGAAGAATTCA+TGG	-	chr1.2:44857416-44857435	None:intergenic	30.0%
	GTTCAAGAAATGTTACGAAT+TGG	+	chr1.2:44858318-44858337	MS.gene45456:CDS	30.0%
	TATTTCACTACAACTCATGA+AGG	+	chr1.2:44857210-44857229	MS.gene45456:CDS	30.0%
	TCATGAGTTGTAGTGAAATA+GGG	-	chr1.2:44857210-44857229	None:intergenic	30.0%
	TTAATTCAACTCGTCGAATT+TGG	+	chr1.2:44858027-44858046	MS.gene45456:CDS	30.0%
	TTCATCTTCATGTTCAACAA+CGG	+	chr1.2:44857654-44857673	MS.gene45456:CDS	30.0%
	TTCATGAGTTGTAGTGAAAT+AGG	-	chr1.2:44857211-44857230	None:intergenic	30.0%
	TTCTTCTTGATTGCAAAGAA+AGG	+	chr1.2:44858103-44858122	MS.gene45456:CDS	30.0%
	TTGATGCTTTCTTTGATATC+TGG	-	chr1.2:44857990-44858009	None:intergenic	30.0%
!!	TATTGTTGCTAAGCTTTGTT+TGG	+	chr1.2:44858341-44858360	MS.gene45456:CDS	30.0%
!!	TTTAAGGAGTTTTTCGATGA+GGG	-	chr1.2:44857476-44857495	None:intergenic	30.0%
!!	TTTGATGATGATGATGTTGA+AGG	+	chr1.2:44857694-44857713	MS.gene45456:CDS	30.0%
!!!	TTTTGAGCTTTTTTAGGGTT+TGG	-	chr1.2:44857537-44857556	None:intergenic	30.0%
	AGATTTGAACTCTTAAGCCA+TGG	+	chr1.2:44858183-44858202	MS.gene45456:CDS	35.0%
	AGGGTTTGGATAAGTAAATG+AGG	-	chr1.2:44857523-44857542	None:intergenic	35.0%
	ATGTTATGTCAATGTGCTGA+TGG	+	chr1.2:44858159-44858178	MS.gene45456:CDS	35.0%
	TGCACCATGAATTCTTCTTA+TGG	+	chr1.2:44857409-44857428	MS.gene45456:CDS	35.0%
!	CGAAAAATGGCTCTTTTCAT+CGG	+	chr1.2:44857279-44857298	MS.gene45456:CDS	35.0%
!!	ACAGAGAAAGCATCGAAAAA+TGG	+	chr1.2:44857266-44857285	MS.gene45456:CDS	35.0%
!!	CTTTAAGGAGTTTTTCGATG+AGG	-	chr1.2:44857477-44857496	None:intergenic	35.0%
!!	GATTTTGAGGGTTTCAACAA+TGG	+	chr1.2:44858233-44858252	MS.gene45456:CDS	35.0%
!!	TCAAGTTGATAGTGGAAACA+AGG	+	chr1.2:44858368-44858387	MS.gene45456:CDS	35.0%
!!	TTGGTTCTTCAAGTTGATAG+TGG	+	chr1.2:44858360-44858379	MS.gene45456:CDS	35.0%
!!	TTTAGATTGGCTAGCTTTGT+TGG	-	chr1.2:44857928-44857947	None:intergenic	35.0%
!!	TTTTTCGATGAGGGTTTTTG+TGG	-	chr1.2:44857467-44857486	None:intergenic	35.0%
!!!	TGAGATGATTTTGGTGCTTT+TGG	+	chr1.2:44858134-44858153	MS.gene45456:CDS	35.0%
	AGCACCAAAATCATCTCACA+TGG	-	chr1.2:44858132-44858151	None:intergenic	40.0%
	CAATAGCTAAACCACATCCA+TGG	-	chr1.2:44858203-44858222	None:intergenic	40.0%
!	GAAGCCATGTGAGATGATTT+TGG	+	chr1.2:44858125-44858144	MS.gene45456:CDS	40.0%
!	GTTTTTGTGGTTGGAGGTTT+TGG	-	chr1.2:44857454-44857473	None:intergenic	40.0%
!!	TGATAGTGGAAACAAGGCAA+AGG	+	chr1.2:44858374-44858393	MS.gene45456:CDS	40.0%
!!!	GTGAGTTGTTGTTTTGTGAC+AGG	-	chr1.2:44857319-44857338	None:intergenic	40.0%
	AATTCATGGTGCACCATGCT+TGG	-	chr1.2:44857402-44857421	None:intergenic	45.0%
	ACAAGGCAAAGGAGAAAGCA+AGG	+	chr1.2:44858385-44858404	MS.gene45456:CDS	45.0%
	ATGCCTGTTGAGACAGTAAC+TGG	-	chr1.2:44857238-44857257	None:intergenic	45.0%
	CAAGGCAAAGGAGAAAGCAA+GGG	+	chr1.2:44858386-44858405	MS.gene45456:CDS	45.0%
	CTTGCTTCATACCCAACAAG+TGG	+	chr1.2:44858468-44858487	MS.gene45456:CDS	45.0%
	GAACTCTTAAGCCATGGATG+TGG	+	chr1.2:44858189-44858208	MS.gene45456:CDS	45.0%
	GATCCAGTTACTGTCTCAAC+AGG	+	chr1.2:44857232-44857251	MS.gene45456:CDS	45.0%
	TGGCTAATGATAGAGCTGTG+AGG	+	chr1.2:44858253-44858272	MS.gene45456:CDS	45.0%
	TTCGATGCTTTCTCTGTCGT+AGG	-	chr1.2:44857263-44857282	None:intergenic	45.0%
	TTCGTAGACTCATCCAAGCA+TGG	+	chr1.2:44857386-44857405	MS.gene45456:CDS	45.0%
!	AGTCTACGAAGAGTGTGGTT+TGG	-	chr1.2:44857376-44857395	None:intergenic	45.0%
!	ATGAGGGTTTTTGTGGTTGG+AGG	-	chr1.2:44857460-44857479	None:intergenic	45.0%
!	TCGATGAGGGTTTTTGTGGT+TGG	-	chr1.2:44857463-44857482	None:intergenic	45.0%
	CCGAGAGTGAGTCAAATCGA+CGG	+	chr1.2:44857566-44857585	MS.gene45456:CDS	50.0%
	GGATGAGTCTACGAAGAGTG+TGG	-	chr1.2:44857381-44857400	None:intergenic	50.0%
	TGCTAAGAACTCGACTGCAC+CGG	-	chr1.2:44857605-44857624	None:intergenic	50.0%
!!	CCGTCGATTTGACTCACTCT+CGG	-	chr1.2:44857569-44857588	None:intergenic	50.0%
!!!	GTGGTTGGAGGTTTTGGAGT+TGG	-	chr1.2:44857448-44857467	None:intergenic	50.0%
	CGACGGTGTATTGAATCCGC+CGG	+	chr1.2:44857583-44857602	MS.gene45456:CDS	55.0%
	TAAGAACTCGACTGCACCGG+CGG	-	chr1.2:44857602-44857621	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	44857169	44858494	44857169	ID=MS.gene45456
chr1.2	mRNA	44857169	44858494	44857169	ID=MS.gene45456.t1;Parent=MS.gene45456
chr1.2	exon	44857169	44858494	44857169	ID=MS.gene45456.t1.exon1;Parent=MS.gene45456.t1
chr1.2	CDS	44857169	44858494	44857169	ID=cds.MS.gene45456.t1;Parent=MS.gene45456.t1

Gene Sequence

>MS.gene45456

ATGAATCAAGATATCGAAGTTACACCATTTTTTCTTTGCCCTATTTCACTACAACTCATGAAGGATCCAGTTACTGTCTCAACAGGCATAACCTACGACAGAGAAAGCATCGAAAAATGGCTCTTTTCATCGGAAAACAAAACATGTCCTGTCACAAAACAACAACTCACACATGATGATGCAAATGATCTCATTATTCTCACTCCAAACCACACTCTTCGTAGACTCATCCAAGCATGGTGCACCATGAATTCTTCTTATGGAATCGAAAGGATTCCAACTCCAAAACCTCCAACCACAAAAACCCTCATCGAAAAACTCCTTAAAGAAGCTTCTGATTCTTCATATTCACCTCATTTACTTATCCAAACCCTAAAAAAGCTCAAAACAATTGCATCCGAGAGTGAGTCAAATCGACGGTGTATTGAATCCGCCGGTGCAGTCGAGTTCTTAGCATCAATAGTTACAAAAAACAACACAAGTTGTTCATCTTCATGTTCAACAACGGAATTAATTGAAGCTAGCTTTGATGATGATGATGTTGAAGGTTTTGCTTTTGACTTCAAAATAGGTGCAGAAGATGAAGCTATAAACATCCTTTACAATCTTCAATTATCAGAACAAGGTTTGAAAACTCTCCTAAACTTCAAAAATGGAGAATTTTTAGACTCTTTAATGAAATTATTGCAAAAGGGTAACTACGATTCAAGAACATACTCAGTTTTTCTGTTGAAATCAATGTCAAAAGTAGCTGATCCAACAAAGCTAGCCAATCTAAAGACCGAGTTTTTTGTCGAGTTAGTTCAACTTCTCAAAGACCAGATATCAAAGAAAGCATCAAAAGCAACACTACAAACGTTAATTCAACTCGTCGAATTTGGAAGAAATAGAGTAAAAGCAATTGAATCAGGTTGTGTTTCTGCTTTGATAGAACTTCTTCTTGATTGCAAAGAAAGGAAGCCATGTGAGATGATTTTGGTGCTTTTGGAGATGTTATGTCAATGTGCTGATGGAAGATTTGAACTCTTAAGCCATGGATGTGGTTTAGCTATTGTTTCAAAGAAGATTTTGAGGGTTTCAACAATGGCTAATGATAGAGCTGTGAGGATTCTTCTTTCAGTTTCAAGATTTTCTGCTACACATTTTGTTGTTCAAGAAATGTTACGAATTGGTATTGTTGCTAAGCTTTGTTTGGTTCTTCAAGTTGATAGTGGAAACAAGGCAAAGGAGAAAGCAAGGGAGATTCTTAAATTGCATTCAAAGTCTTGGATGAATTCTCATTGCATACCTTTTAATTTACTTGCTTCATACCCAACAAGTGGATAA

Protein sequence

>MS.gene45456.t1

MNQDIEVTPFFLCPISLQLMKDPVTVSTGITYDRESIEKWLFSSENKTCPVTKQQLTHDDANDLIILTPNHTLRRLIQAWCTMNSSYGIERIPTPKPPTTKTLIEKLLKEASDSSYSPHLLIQTLKKLKTIASESESNRRCIESAGAVEFLASIVTKNNTSCSSSCSTTELIEASFDDDDVEGFAFDFKIGAEDEAINILYNLQLSEQGLKTLLNFKNGEFLDSLMKLLQKGNYDSRTYSVFLLKSMSKVADPTKLANLKTEFFVELVQLLKDQISKKASKATLQTLIQLVEFGRNRVKAIESGCVSALIELLLDCKERKPCEMILVLLEMLCQCADGRFELLSHGCGLAIVSKKILRVSTMANDRAVRILLSVSRFSATHFVVQEMLRIGIVAKLCLVLQVDSGNKAKEKAREILKLHSKSWMNSHCIPFNLLASYPTSG