Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52406.t1 | XP_013463241.1 | 94.2 | 468 | 22 | 2 | 1 | 468 | 1 | 463 | 6.20E-251 | 876.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52406.t1 | Q94F30 | 51.6 | 496 | 205 | 12 | 1 | 468 | 1 | 489 | 1.7e-127 | 457.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52406.t1 | A0A072V5F5 | 94.2 | 468 | 22 | 2 | 1 | 468 | 1 | 463 | 4.5e-251 | 876.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049419 | MS.gene52406 | -0.804522 | 2.07E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene52406 | 0.803039 | 4.22E-49 | -1.69E-46 |
| MS.gene050105 | MS.gene52406 | 0.806788 | 6.94E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene52406 | 0.816083 | 6.64E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene52406 | -0.814925 | 1.20E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene52406 | 0.825929 | 3.59E-54 | -1.69E-46 |
| MS.gene050759 | MS.gene52406 | 0.819257 | 1.28E-52 | -1.69E-46 |
| MS.gene050941 | MS.gene52406 | 0.810169 | 1.32E-50 | -1.69E-46 |
| MS.gene050962 | MS.gene52406 | 0.802365 | 5.81E-49 | -1.69E-46 |
| MS.gene051122 | MS.gene52406 | 0.808834 | 2.55E-50 | -1.69E-46 |
| MS.gene051490 | MS.gene52406 | 0.80019 | 1.62E-48 | -1.69E-46 |
| MS.gene051975 | MS.gene52406 | 0.825368 | 4.87E-54 | -1.69E-46 |
| MS.gene052012 | MS.gene52406 | 0.808172 | 3.53E-50 | -1.69E-46 |
| MS.gene052674 | MS.gene52406 | 0.809611 | 1.74E-50 | -1.69E-46 |
| MS.gene052675 | MS.gene52406 | 0.809497 | 1.84E-50 | -1.69E-46 |
| MS.gene052677 | MS.gene52406 | 0.812628 | 3.85E-51 | -1.69E-46 |
| MS.gene052954 | MS.gene52406 | 0.812146 | 4.91E-51 | -1.69E-46 |
| MS.gene053058 | MS.gene52406 | 0.800629 | 1.32E-48 | -1.69E-46 |
| MS.gene053726 | MS.gene52406 | 0.823392 | 1.42E-53 | -1.69E-46 |
| MS.gene054479 | MS.gene52406 | 0.879566 | 1.12E-69 | -1.69E-46 |
| MS.gene055222 | MS.gene52406 | 0.827398 | 1.60E-54 | -1.69E-46 |
| MS.gene055313 | MS.gene52406 | 0.800486 | 1.41E-48 | -1.69E-46 |
| MS.gene055623 | MS.gene52406 | 0.804086 | 2.56E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene52406 | 0.831618 | 1.51E-55 | -1.69E-46 |
| MS.gene055841 | MS.gene52406 | 0.827668 | 1.38E-54 | -1.69E-46 |
| MS.gene055864 | MS.gene52406 | 0.832381 | 9.77E-56 | -1.69E-46 |
| MS.gene055926 | MS.gene52406 | 0.816037 | 6.80E-52 | -1.69E-46 |
| MS.gene056045 | MS.gene52406 | 0.839967 | 1.15E-57 | -1.69E-46 |
| MS.gene056162 | MS.gene52406 | 0.802492 | 5.47E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene52406 | 0.804492 | 2.10E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene52406 | 0.830783 | 2.42E-55 | -1.69E-46 |
| MS.gene056509 | MS.gene52406 | 0.811131 | 8.16E-51 | -1.69E-46 |
| MS.gene056776 | MS.gene52406 | 0.812114 | 4.99E-51 | -1.69E-46 |
| MS.gene056779 | MS.gene52406 | 0.813824 | 2.11E-51 | -1.69E-46 |
| MS.gene056787 | MS.gene52406 | 0.824877 | 6.36E-54 | -1.69E-46 |
| MS.gene056986 | MS.gene52406 | 0.80991 | 1.50E-50 | -1.69E-46 |
| MS.gene057155 | MS.gene52406 | 0.813944 | 1.98E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene52406 | 0.802064 | 6.70E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene52406 | 0.823685 | 1.21E-53 | -1.69E-46 |
| MS.gene057869 | MS.gene52406 | 0.803929 | 2.76E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene52406 | 0.807823 | 4.19E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene52406 | 0.801237 | 9.90E-49 | -1.69E-46 |
| MS.gene058146 | MS.gene52406 | 0.843134 | 1.69E-58 | -1.69E-46 |
| MS.gene058223 | MS.gene52406 | -0.818696 | 1.71E-52 | -1.69E-46 |
| MS.gene058429 | MS.gene52406 | 0.832935 | 7.12E-56 | -1.69E-46 |
| MS.gene058548 | MS.gene52406 | 0.828694 | 7.80E-55 | -1.69E-46 |
| MS.gene059283 | MS.gene52406 | 0.822069 | 2.89E-53 | -1.69E-46 |
| MS.gene060011 | MS.gene52406 | 0.801392 | 9.20E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene52406 | 0.807813 | 4.21E-50 | -1.69E-46 |
| MS.gene060296 | MS.gene52406 | 0.820785 | 5.71E-53 | -1.69E-46 |
| MS.gene060520 | MS.gene52406 | 0.810362 | 1.20E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene52406 | 0.832014 | 1.20E-55 | -1.69E-46 |
| MS.gene060803 | MS.gene52406 | 0.821635 | 3.64E-53 | -1.69E-46 |
| MS.gene060850 | MS.gene52406 | 0.846733 | 1.80E-59 | -1.69E-46 |
| MS.gene060851 | MS.gene52406 | 0.848966 | 4.37E-60 | -1.69E-46 |
| MS.gene060852 | MS.gene52406 | 0.846299 | 2.37E-59 | -1.69E-46 |
| MS.gene060932 | MS.gene52406 | 0.824965 | 6.06E-54 | -1.69E-46 |
| MS.gene060998 | MS.gene52406 | 0.809202 | 2.13E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52406.t1 | MTR_2g436660 | 94.231 | 468 | 22 | 2 | 1 | 468 | 1 | 463 | 0.0 | 908 |
| MS.gene52406.t1 | MTR_2g436660 | 92.821 | 390 | 23 | 2 | 1 | 390 | 1 | 385 | 0.0 | 709 |
| MS.gene52406.t1 | MTR_4g119970 | 57.715 | 499 | 166 | 13 | 3 | 468 | 4 | 490 | 0.0 | 535 |
| MS.gene52406.t1 | MTR_4g119970 | 49.711 | 346 | 129 | 13 | 9 | 321 | 10 | 343 | 1.63e-89 | 277 |
| MS.gene52406.t1 | MTR_8g064470 | 28.788 | 198 | 109 | 10 | 266 | 438 | 309 | 499 | 2.88e-17 | 85.1 |
| MS.gene52406.t1 | MTR_5g066230 | 28.713 | 202 | 107 | 10 | 276 | 447 | 194 | 388 | 1.37e-15 | 80.1 |
| MS.gene52406.t1 | MTR_3g100390 | 30.332 | 211 | 111 | 9 | 266 | 447 | 392 | 595 | 7.64e-11 | 65.1 |
| MS.gene52406.t1 | MTR_3g100390 | 30.332 | 211 | 111 | 9 | 266 | 447 | 395 | 598 | 7.92e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52406.t1 | AT4G15880 | 51.503 | 499 | 201 | 14 | 1 | 468 | 1 | 489 | 1.28e-164 | 474 |
| MS.gene52406.t1 | AT3G06910 | 48.268 | 462 | 201 | 11 | 32 | 468 | 54 | 502 | 1.32e-134 | 397 |
| MS.gene52406.t1 | AT4G15880 | 48.095 | 420 | 177 | 14 | 1 | 389 | 1 | 410 | 3.28e-115 | 345 |
| MS.gene52406.t1 | AT4G00690 | 64.286 | 238 | 82 | 3 | 233 | 468 | 105 | 341 | 3.25e-110 | 330 |
| MS.gene52406.t1 | AT1G10570 | 30.043 | 233 | 119 | 11 | 233 | 432 | 165 | 386 | 1.62e-20 | 94.0 |
| MS.gene52406.t1 | AT1G10570 | 30.472 | 233 | 118 | 12 | 233 | 432 | 296 | 517 | 2.39e-20 | 94.4 |
| MS.gene52406.t1 | AT1G10570 | 30.043 | 233 | 119 | 11 | 233 | 432 | 295 | 516 | 2.72e-20 | 94.4 |
| MS.gene52406.t1 | AT1G60220 | 32.143 | 196 | 96 | 9 | 266 | 432 | 343 | 530 | 7.11e-19 | 89.7 |
| MS.gene52406.t1 | AT4G33620 | 29.130 | 230 | 124 | 8 | 262 | 464 | 301 | 518 | 2.34e-12 | 69.7 |
| MS.gene52406.t1 | AT1G09730 | 27.885 | 208 | 120 | 8 | 266 | 447 | 394 | 597 | 4.32e-12 | 68.9 |
| MS.gene52406.t1 | AT1G09730 | 27.885 | 208 | 120 | 8 | 266 | 447 | 426 | 629 | 5.11e-12 | 68.9 |
Find 127 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGATTGGTATGAAAATT+TGG | 0.196620 | 2.3:-54727671 | None:intergenic |
| AGGAATTGGGGTTTGGTGTC+TGG | 0.216416 | 2.3:-54727742 | None:intergenic |
| GACCTTCCTGAGCAGGAAAA+TGG | 0.235361 | 2.3:+54731275 | MS.gene52406:CDS |
| ATGGACGACTCAAAGGAAAT+TGG | 0.270929 | 2.3:+54730074 | MS.gene52406:CDS |
| ATGACATTTCAGAAACTTCT+TGG | 0.270951 | 2.3:-54729261 | None:intergenic |
| GGAGAAGGTGGTGATTGATT+TGG | 0.282114 | 2.3:+54727927 | MS.gene52406:CDS |
| CGTGAACTTCACGGAGGAAT+TGG | 0.283636 | 2.3:-54727756 | None:intergenic |
| TTACTTTATCACAATCAAAT+AGG | 0.308990 | 2.3:-54730104 | None:intergenic |
| TGCATTCTTCAGAGCGTTTA+CGG | 0.318121 | 2.3:-54727591 | None:intergenic |
| TGTGTATAAGAAGTTGCTTC+AGG | 0.324997 | 2.3:+54728122 | MS.gene52406:CDS |
| GAGATGAAGGATGTTGAAAT+TGG | 0.330285 | 2.3:+54728012 | MS.gene52406:CDS |
| AAGGCGAAGCGTTCGGCGTT+GGG | 0.354517 | 2.3:+54727880 | MS.gene52406:CDS |
| CCAAGCACCAGTGAATTTCT+TGG | 0.356823 | 2.3:-54730232 | None:intergenic |
| GTGAACTTCACGGAGGAATT+GGG | 0.363077 | 2.3:-54727755 | None:intergenic |
| GGGTTTGGTGTCTGGGTAAC+GGG | 0.366240 | 2.3:-54727734 | None:intergenic |
| GGGGAGGATTCGGATGATTC+TGG | 0.366913 | 2.3:+54727958 | MS.gene52406:CDS |
| GTCATCGGGTTCGCCGGATT+CGG | 0.378768 | 2.3:+54728047 | MS.gene52406:CDS |
| GTGGATTGGTATGAAAATTT+GGG | 0.380610 | 2.3:-54727670 | None:intergenic |
| GGATTCAGATGGGGAGGATT+CGG | 0.383737 | 2.3:+54727948 | MS.gene52406:CDS |
| GTTCTGCAGGAGGAAGATAT+TGG | 0.389341 | 2.3:+54728979 | MS.gene52406:intron |
| CTTTCAATGAGTCAAGATAC+TGG | 0.389721 | 2.3:-54730283 | None:intergenic |
| TGTTCTTCATCATCTGTTAG+AGG | 0.391081 | 2.3:-54728855 | None:intergenic |
| TCCTTTGAGTCGTCCATCTT+CGG | 0.393658 | 2.3:-54730068 | None:intergenic |
| GGAATTGGGGTTTGGTGTCT+GGG | 0.399366 | 2.3:-54727741 | None:intergenic |
| TTCACGGAGGAATTGGGGTT+TGG | 0.407189 | 2.3:-54727749 | None:intergenic |
| GACGAAGTAAAAGACAAAAC+TGG | 0.409586 | 2.3:+54731209 | MS.gene52406:CDS |
| ACCTCAACAAGTTCCTTCTT+AGG | 0.422611 | 2.3:-54728234 | None:intergenic |
| GCTGTCCTGCGCCGGAAGTA+AGG | 0.427326 | 2.3:-54732469 | None:intergenic |
| AGGAACACATGCCTTACTTC+CGG | 0.430046 | 2.3:+54732458 | MS.gene52406:intron |
| GGGGTTTGGTGTCTGGGTAA+CGG | 0.430866 | 2.3:-54727735 | None:intergenic |
| TCAATTGTTAAGGCCTAAGA+AGG | 0.433149 | 2.3:+54728221 | MS.gene52406:CDS |
| TGACATTTCAGAAACTTCTT+GGG | 0.443127 | 2.3:-54729260 | None:intergenic |
| GGAGTTCAACGGCGGTCATC+GGG | 0.444100 | 2.3:+54728033 | MS.gene52406:CDS |
| CAAGGCGAAGCGTTCGGCGT+TGG | 0.447977 | 2.3:+54727879 | MS.gene52406:CDS |
| GTTTGAGGTGGAAACGGGTC+GGG | 0.451346 | 2.3:-54727692 | None:intergenic |
| AAAGATGCGGTGCCTTCTCC+CGG | 0.455689 | 2.3:+54729039 | MS.gene52406:CDS |
| GTGATTGATTTGGATTCAGA+TGG | 0.455759 | 2.3:+54727937 | MS.gene52406:CDS |
| GGCGTTGGGGAAATGTAGAT+TGG | 0.457174 | 2.3:+54727894 | MS.gene52406:CDS |
| ACCTTCCTGAGCAGGAAAAT+GGG | 0.458199 | 2.3:+54731276 | MS.gene52406:CDS |
| TGGACGACTCAAAGGAAATT+GGG | 0.459299 | 2.3:+54730075 | MS.gene52406:CDS |
| TGGAAACGGGTCGGGTGGAT+TGG | 0.461772 | 2.3:-54727684 | None:intergenic |
| GACTTCTATAGCAGAGGCCT+GGG | 0.461794 | 2.3:+54732038 | MS.gene52406:CDS |
| CGACTTCTATAGCAGAGGCC+TGG | 0.463003 | 2.3:+54732037 | MS.gene52406:CDS |
| TGGAGTTCAACGGCGGTCAT+CGG | 0.468066 | 2.3:+54728032 | MS.gene52406:CDS |
| AGAGGGACAAAAGGCTCAAA+TGG | 0.470575 | 2.3:-54728837 | None:intergenic |
| ATTGGCAGTTAATAAGTGGC+AGG | 0.470755 | 2.3:+54730022 | MS.gene52406:intron |
| TCTAACAGATGATGAAGAAC+AGG | 0.472011 | 2.3:+54728857 | MS.gene52406:CDS |
| GCATTAGTCAAAGCCGAATC+CGG | 0.472036 | 2.3:-54728060 | None:intergenic |
| CCAGTGAATTTCTTGGTGGA+TGG | 0.476301 | 2.3:-54730225 | None:intergenic |
| TCTAGAAACGATGGCGTTTG+AGG | 0.478348 | 2.3:-54727707 | None:intergenic |
| GTTAATTGGCAGTTAATAAG+TGG | 0.486888 | 2.3:+54730018 | MS.gene52406:intron |
| AGTTCTAATATTGAGGTGTC+AGG | 0.489874 | 2.3:+54729013 | MS.gene52406:CDS |
| ATGGCGTTTGAGGTGGAAAC+GGG | 0.496263 | 2.3:-54727697 | None:intergenic |
| TGTCGAAGACCTTCCTGAGC+AGG | 0.498141 | 2.3:+54731268 | MS.gene52406:CDS |
| TTATGACAAGGCGAAGCGTT+CGG | 0.498795 | 2.3:+54727873 | MS.gene52406:CDS |
| GATGGCGTTTGAGGTGGAAA+CGG | 0.501181 | 2.3:-54727698 | None:intergenic |
| CATGAACACTTGAAAGATCA+TGG | 0.501998 | 2.3:-54728101 | None:intergenic |
| ACGGCGGTCATCGGGTTCGC+CGG | 0.502399 | 2.3:+54728041 | MS.gene52406:CDS |
| GGTGCCTTCTCCCGGGTGCA+TGG | 0.503021 | 2.3:+54729047 | MS.gene52406:CDS |
| TGATTTGGATTCAGATGGGG+AGG | 0.505907 | 2.3:+54727942 | MS.gene52406:CDS |
| ATTACAAATCTGTCCGAAGA+TGG | 0.506348 | 2.3:+54730055 | MS.gene52406:CDS |
| GGTTGTTGAGATTCGTGATA+CGG | 0.510063 | 2.3:+54727990 | MS.gene52406:CDS |
| TCATCTGTTAGAGGGACAAA+AGG | 0.510379 | 2.3:-54728846 | None:intergenic |
| TCATGAGAGTTCTAATATTG+AGG | 0.511257 | 2.3:+54729006 | MS.gene52406:CDS |
| TACAGGGCGCGTGAACTTCA+CGG | 0.513088 | 2.3:-54727765 | None:intergenic |
| CAGTGAATTTCTTGGTGGAT+GGG | 0.515110 | 2.3:-54730224 | None:intergenic |
| TTCGACATATTCTTTCTCCC+AGG | 0.518066 | 2.3:-54731252 | None:intergenic |
| GTGTATAAGAAGTTGCTTCA+GGG | 0.519857 | 2.3:+54728123 | MS.gene52406:CDS |
| CGTTTGAGGTGGAAACGGGT+CGG | 0.522844 | 2.3:-54727693 | None:intergenic |
| TGCTTCAGGGTGTTCAGAGA+AGG | 0.524599 | 2.3:+54728136 | MS.gene52406:CDS |
| CAGTTAATAAGTGGCAGGGA+TGG | 0.525028 | 2.3:+54730027 | MS.gene52406:intron |
| CCAAGAAATTCACTGGTGCT+TGG | 0.526399 | 2.3:+54730232 | MS.gene52406:CDS |
| CCTCCTTGGCTGTCCTGCGC+CGG | 0.533561 | 2.3:-54732477 | None:intergenic |
| ACATGCCTTACTTCCGGCGC+AGG | 0.538875 | 2.3:+54732464 | MS.gene52406:CDS |
| TGAGGTGGAAACGGGTCGGG+TGG | 0.538998 | 2.3:-54727689 | None:intergenic |
| TCTTGACTCATTGAAAGGAA+TGG | 0.539397 | 2.3:+54730289 | MS.gene52406:CDS |
| GATTCGTGATACGGAGATGA+AGG | 0.540593 | 2.3:+54727999 | MS.gene52406:CDS |
| CAGTATCTTGACTCATTGAA+AGG | 0.543690 | 2.3:+54730284 | MS.gene52406:CDS |
| CCATCCACCAAGAAATTCAC+TGG | 0.546950 | 2.3:+54730225 | MS.gene52406:CDS |
| TCTCAATCTCAATACCTCCT+TGG | 0.547984 | 2.3:-54732491 | None:intergenic |
| CATCAAATCATACCGGTTGG+AGG | 0.548310 | 2.3:-54728898 | None:intergenic |
| TTCGGATGATTCTGGTGTTG+TGG | 0.550785 | 2.3:+54727966 | MS.gene52406:CDS |
| AAGATATTGATGTAAGCACC+TGG | 0.558060 | 2.3:+54731234 | MS.gene52406:CDS |
| AGAGCGTTTACGGTTGCTTG+TGG | 0.562242 | 2.3:-54727581 | None:intergenic |
| TGATTGATTTGGATTCAGAT+GGG | 0.563741 | 2.3:+54727938 | MS.gene52406:CDS |
| GTTCTTCATCATCTGTTAGA+GGG | 0.565156 | 2.3:-54728854 | None:intergenic |
| TCCGAAGATGGACGACTCAA+AGG | 0.566691 | 2.3:+54730067 | MS.gene52406:CDS |
| TGAACTTCACGGAGGAATTG+GGG | 0.568215 | 2.3:-54727754 | None:intergenic |
| GCCTAAGAAGGAACTTGTTG+AGG | 0.573966 | 2.3:+54728233 | MS.gene52406:CDS |
| CTTCCGGCGCAGGACAGCCA+AGG | 0.574731 | 2.3:+54732474 | MS.gene52406:CDS |
| AAGATGCGGTGCCTTCTCCC+GGG | 0.577145 | 2.3:+54729040 | MS.gene52406:CDS |
| TTAACCATGCACCCGGGAGA+AGG | 0.578419 | 2.3:-54729051 | None:intergenic |
| ATGTAGATTGGTGACACAGA+AGG | 0.588247 | 2.3:+54727906 | MS.gene52406:CDS |
| AGGCGAAGCGTTCGGCGTTG+GGG | 0.589125 | 2.3:+54727881 | MS.gene52406:CDS |
| GATTGATTTGGATTCAGATG+GGG | 0.589369 | 2.3:+54727939 | MS.gene52406:CDS |
| TCATCATTTAACCATGCACC+CGG | 0.591177 | 2.3:-54729058 | None:intergenic |
| GACTAATGCGGTGGTGAATG+TGG | 0.591893 | 2.3:+54728074 | MS.gene52406:CDS |
| CTACTGAACAGGTTTGATTG+CGG | 0.594322 | 2.3:+54731993 | MS.gene52406:intron |
| TTCGGCTTTGACTAATGCGG+TGG | 0.594690 | 2.3:+54728065 | MS.gene52406:CDS |
| AGAAACGATGGCGTTTGAGG+TGG | 0.601462 | 2.3:-54727704 | None:intergenic |
| ACCTCGAGTTGCTGAAAGAG+AGG | 0.601982 | 2.3:+54729225 | MS.gene52406:CDS |
| CCCTCTCTTTCAGCAACTCG+AGG | 0.603191 | 2.3:-54729226 | None:intergenic |
| TTGGCAGTTAATAAGTGGCA+GGG | 0.605074 | 2.3:+54730023 | MS.gene52406:intron |
| AGCACCAGTGAATTTCTTGG+TGG | 0.607233 | 2.3:-54730229 | None:intergenic |
| TAGCCGTGTGCTAAAAGTGC+TGG | 0.608533 | 2.3:+54730313 | MS.gene52406:CDS |
| CAGGCCTCTGCTATAGAAGT+CGG | 0.610776 | 2.3:-54732036 | None:intergenic |
| GGGTGCATGGTTAAATGATG+AGG | 0.610991 | 2.3:+54729060 | MS.gene52406:CDS |
| TGGTTGAGAAATAGAGATGG+TGG | 0.626211 | 2.3:-54727635 | None:intergenic |
| GGATGATTCTGGTGTTGTGG+AGG | 0.631804 | 2.3:+54727969 | MS.gene52406:CDS |
| CCTCGAGTTGCTGAAAGAGA+GGG | 0.634700 | 2.3:+54729226 | MS.gene52406:CDS |
| AACAGATGATGAAGAACAGG+AGG | 0.637201 | 2.3:+54728860 | MS.gene52406:CDS |
| ATGTTGAAATTGGAGTTCAA+CGG | 0.644020 | 2.3:+54728022 | MS.gene52406:CDS |
| AGATGGTGGTGTGATTGTTG+AGG | 0.648258 | 2.3:-54727621 | None:intergenic |
| CCGGCGCAGGACAGCCAAGG+AGG | 0.650724 | 2.3:+54732477 | MS.gene52406:CDS |
| CCTGGTTAAAACACAGACCC+AGG | 0.650902 | 2.3:-54732055 | None:intergenic |
| ATTGGTGACACAGAAGGAGA+AGG | 0.654383 | 2.3:+54727912 | MS.gene52406:CDS |
| GGTGACACAGAAGGAGAAGG+TGG | 0.661441 | 2.3:+54727915 | MS.gene52406:CDS |
| AGATATTGATGTAAGCACCT+GGG | 0.669174 | 2.3:+54731235 | MS.gene52406:CDS |
| AGATGGTTGAGAAATAGAGA+TGG | 0.676316 | 2.3:-54727638 | None:intergenic |
| TTGAAATTGGAGTTCAACGG+CGG | 0.677101 | 2.3:+54728025 | MS.gene52406:CDS |
| ACGGGAGAGTCTAGAAACGA+TGG | 0.683103 | 2.3:-54727716 | None:intergenic |
| GGATTCGGCTTTGACTAATG+CGG | 0.689911 | 2.3:+54728062 | MS.gene52406:CDS |
| AGGTGTCAGGAGAAAAGATG+CGG | 0.692226 | 2.3:+54729026 | MS.gene52406:CDS |
| CATCATTTAACCATGCACCC+GGG | 0.692695 | 2.3:-54729057 | None:intergenic |
| TATGCCGACTTCTATAGCAG+AGG | 0.698945 | 2.3:+54732032 | MS.gene52406:CDS |
| GGTGGTGTGATTGTTGAGGA+CGG | 0.715231 | 2.3:-54727617 | None:intergenic |
| AGGGCGCGTGAACTTCACGG+AGG | 0.817111 | 2.3:-54727762 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATGTATAACTAAAATAA+CGG | + | chr2.3:54729874-54729893 | MS.gene52406:intron | 10.0% |
| !!! | TTAAATTCTTTTCTATATTA+AGG | + | chr2.3:54729902-54729921 | MS.gene52406:intron | 10.0% |
| !!! | TTTTTATTTTGAATGTTAAT+TGG | + | chr2.3:54730004-54730023 | MS.gene52406:intron | 10.0% |
| !! | AACTTCAATATACAATTTAA+AGG | - | chr2.3:54731035-54731054 | None:intergenic | 15.0% |
| !! | TGGACAAAAATTTATTAATA+TGG | + | chr2.3:54729530-54729549 | MS.gene52406:intron | 15.0% |
| !! | TTTATAAATTAAAAAGTCAC+TGG | + | chr2.3:54730988-54731007 | MS.gene52406:intron | 15.0% |
| !!! | AAAATATTGAATGGATTAAA+CGG | - | chr2.3:54732240-54732259 | None:intergenic | 15.0% |
| !!! | TTAATCCATTCAATATTTTT+GGG | + | chr2.3:54732241-54732260 | MS.gene52406:intron | 15.0% |
| !!! | TTTAATCCATTCAATATTTT+TGG | + | chr2.3:54732240-54732259 | MS.gene52406:intron | 15.0% |
| !!! | TTTTTTAGCATAAACATTTT+TGG | + | chr2.3:54728267-54728286 | MS.gene52406:intron | 15.0% |
| !! | AATGAAAGAAGATAAATTGT+AGG | - | chr2.3:54729614-54729633 | None:intergenic | 20.0% |
| !! | AATGTTAAAACAACTTCAAT+TGG | - | chr2.3:54730168-54730187 | None:intergenic | 20.0% |
| !! | ACAAGTTATTAAAACATCAA+AGG | - | chr2.3:54729487-54729506 | None:intergenic | 20.0% |
| !! | ATATTTAAGTAAACAACCAA+GGG | + | chr2.3:54730947-54730966 | MS.gene52406:intron | 20.0% |
| !! | ATCATGATATAATTAAGTGA+AGG | - | chr2.3:54729140-54729159 | None:intergenic | 20.0% |
| !! | GTAACATTTAATAGTGTATT+AGG | + | chr2.3:54728694-54728713 | MS.gene52406:intron | 20.0% |
| !! | TAATTATTGATGTTAAGACA+CGG | + | chr2.3:54731669-54731688 | MS.gene52406:intron | 20.0% |
| !! | TATTAAACATCAATGAACTA+TGG | - | chr2.3:54731607-54731626 | None:intergenic | 20.0% |
| !! | TGTACAAAATGGTTAAATTA+CGG | - | chr2.3:54729973-54729992 | None:intergenic | 20.0% |
| !! | TTACTGATGAACTATAATTA+TGG | + | chr2.3:54728598-54728617 | MS.gene52406:intron | 20.0% |
| !! | TTACTTTATCACAATCAAAT+AGG | - | chr2.3:54730107-54730126 | None:intergenic | 20.0% |
| !! | TTGATGAAAACGTAAATTAT+AGG | + | chr2.3:54728672-54728691 | MS.gene52406:intron | 20.0% |
| !!! | ATATGAAGCATTTCATTTTT+TGG | + | chr2.3:54732082-54732101 | MS.gene52406:intron | 20.0% |
| !!! | ATTCGATTGTTTAAAATCTA+TGG | + | chr2.3:54732298-54732317 | MS.gene52406:intron | 20.0% |
| !!! | CTTGAAAAGTTGAATTTTTT+AGG | - | chr2.3:54727793-54727812 | None:intergenic | 20.0% |
| !!! | TTTTCTTAGTTTGAAGTTTT+AGG | + | chr2.3:54728493-54728512 | MS.gene52406:intron | 20.0% |
| ! | AAACTTCTCTTTCCATTTAT+AGG | + | chr2.3:54732438-54732457 | MS.gene52406:intron | 25.0% |
| ! | AACAAAACTATTCAGTTTGA+TGG | + | chr2.3:54730599-54730618 | MS.gene52406:intron | 25.0% |
| ! | AACATCAAAGGATTACTATA+TGG | - | chr2.3:54729475-54729494 | None:intergenic | 25.0% |
| ! | AAGCACCAGTAATTAAAATT+TGG | - | chr2.3:54728743-54728762 | None:intergenic | 25.0% |
| ! | ACAAAACTATTCAGTTTGAT+GGG | + | chr2.3:54730600-54730619 | MS.gene52406:intron | 25.0% |
| ! | ACATCAATAATTATTACCGA+TGG | - | chr2.3:54731662-54731681 | None:intergenic | 25.0% |
| ! | AGATATCTGCAATGAAAAAT+TGG | + | chr2.3:54731379-54731398 | MS.gene52406:intron | 25.0% |
| ! | AGCACCAGTAATTAAAATTT+GGG | - | chr2.3:54728742-54728761 | None:intergenic | 25.0% |
| ! | ATTACCCATGAAAAAATCAA+CGG | - | chr2.3:54727839-54727858 | None:intergenic | 25.0% |
| ! | CATATTTAAGTAAACAACCA+AGG | + | chr2.3:54730946-54730965 | MS.gene52406:intron | 25.0% |
| ! | CTATAATTATGGTTTAGATG+CGG | + | chr2.3:54728609-54728628 | MS.gene52406:intron | 25.0% |
| ! | GAATACACCAATAGTTAATA+AGG | - | chr2.3:54731577-54731596 | None:intergenic | 25.0% |
| ! | GAATCAATATCTGTACAAAA+TGG | - | chr2.3:54729984-54730003 | None:intergenic | 25.0% |
| ! | GTAATAAATCCTGAAAAGAT+GGG | - | chr2.3:54731938-54731957 | None:intergenic | 25.0% |
| ! | GTATTATTTAGTAGTAGTAG+TGG | + | chr2.3:54728300-54728319 | MS.gene52406:intron | 25.0% |
| ! | GTTTATTCTGAATGTTATGT+TGG | + | chr2.3:54728781-54728800 | MS.gene52406:intron | 25.0% |
| ! | TAATAAATCCTGAAAAGATG+GGG | - | chr2.3:54731937-54731956 | None:intergenic | 25.0% |
| ! | TGTAATAAATCCTGAAAAGA+TGG | - | chr2.3:54731939-54731958 | None:intergenic | 25.0% |
| ! | TTCACATATTTATGTAGTGT+TGG | + | chr2.3:54729324-54729343 | MS.gene52406:intron | 25.0% |
| !! | AAATTTTCCTGTTCAATCAT+TGG | + | chr2.3:54730423-54730442 | MS.gene52406:intron | 25.0% |
| !! | ATCACAGAATTATCTTTTCA+AGG | + | chr2.3:54729826-54729845 | MS.gene52406:intron | 25.0% |
| !! | ATTGAAGTATTTCAAGCAAT+TGG | - | chr2.3:54732201-54732220 | None:intergenic | 25.0% |
| !! | ATTTCATTTTCAAATCTGCA+TGG | + | chr2.3:54730368-54730387 | MS.gene52406:intron | 25.0% |
| !! | GAATAACTCTAATTTGAGTT+TGG | + | chr2.3:54731810-54731829 | MS.gene52406:intron | 25.0% |
| !! | GAGATACTTTTCAATTGTTA+AGG | + | chr2.3:54728211-54728230 | MS.gene52406:CDS | 25.0% |
| !! | TTCTATTTCTTTAATTCCCT+TGG | - | chr2.3:54730966-54730985 | None:intergenic | 25.0% |
| !! | TTGAGGAAGATTTTAAATTG+TGG | + | chr2.3:54728530-54728549 | MS.gene52406:intron | 25.0% |
| !! | TTTTGCCCAAAAATATTGAA+TGG | - | chr2.3:54732249-54732268 | None:intergenic | 25.0% |
| !!! | CAATGGTATTGGTTTAATTT+TGG | - | chr2.3:54732349-54732368 | None:intergenic | 25.0% |
| !!! | CGAATATTTCTAGCAATTAA+AGG | - | chr2.3:54732283-54732302 | None:intergenic | 25.0% |
| !!! | GATGTACATGTTTTAACATT+TGG | + | chr2.3:54731128-54731147 | MS.gene52406:intron | 25.0% |
| !!! | TAGACCCAAATTTTAATTAC+TGG | + | chr2.3:54728735-54728754 | MS.gene52406:intron | 25.0% |
| !!! | TCGTTTTTGTTCAACTAAAA+TGG | - | chr2.3:54732175-54732194 | None:intergenic | 25.0% |
| !!! | TTGAATTTTTTAGGTCTACA+GGG | - | chr2.3:54727784-54727803 | None:intergenic | 25.0% |
| !!! | TTTTCTTAATTTGTGTGAAC+AGG | - | chr2.3:54731511-54731530 | None:intergenic | 25.0% |
| AACAACTTCAATTGGCTAAA+AGG | - | chr2.3:54730160-54730179 | None:intergenic | 30.0% | |
| AATTGTAGGAAATCAAATGC+AGG | - | chr2.3:54729600-54729619 | None:intergenic | 30.0% | |
| ACCAAGAAATTATTGTCATC+TGG | + | chr2.3:54729418-54729437 | MS.gene52406:intron | 30.0% | |
| ACCAGATGACAATAATTTCT+TGG | - | chr2.3:54729422-54729441 | None:intergenic | 30.0% | |
| ACCTGAAAATATACTGTGTT+TGG | + | chr2.3:54729684-54729703 | MS.gene52406:intron | 30.0% | |
| ATATGGCAATCTTGATATTG+TGG | + | chr2.3:54728567-54728586 | MS.gene52406:intron | 30.0% | |
| ATATGTATCTTACCTCATTG+AGG | + | chr2.3:54728951-54728970 | MS.gene52406:intron | 30.0% | |
| ATGACATTTCAGAAACTTCT+TGG | - | chr2.3:54729264-54729283 | None:intergenic | 30.0% | |
| ATGTTGAAATTGGAGTTCAA+CGG | + | chr2.3:54728022-54728041 | MS.gene52406:CDS | 30.0% | |
| ATTAGGAAAACGATACATGT+TGG | + | chr2.3:54728711-54728730 | MS.gene52406:intron | 30.0% | |
| ATTGCCATACTATCAAGTTT+CGG | - | chr2.3:54731705-54731724 | None:intergenic | 30.0% | |
| ATTTATCACCTGCACAATTT+AGG | - | chr2.3:54729201-54729220 | None:intergenic | 30.0% | |
| ATTTCATGATGCAACAATGT+TGG | - | chr2.3:54729163-54729182 | None:intergenic | 30.0% | |
| CAAATGTGTCTGTAATATCT+TGG | + | chr2.3:54730677-54730696 | MS.gene52406:intron | 30.0% | |
| CAATCTTGATATTGTGGAAT+AGG | + | chr2.3:54728573-54728592 | MS.gene52406:intron | 30.0% | |
| GATTGAACAGGAAAATTTGA+AGG | - | chr2.3:54730421-54730440 | None:intergenic | 30.0% | |
| GCTAAACAACCAAAAATGAT+AGG | + | chr2.3:54730914-54730933 | MS.gene52406:intron | 30.0% | |
| GGACAAGTTCAAATTTACTT+GGG | - | chr2.3:54731641-54731660 | None:intergenic | 30.0% | |
| GTAAATTTGAACTTGTCCAT+CGG | + | chr2.3:54731643-54731662 | MS.gene52406:intron | 30.0% | |
| GTTAATTGGCAGTTAATAAG+TGG | + | chr2.3:54730018-54730037 | MS.gene52406:intron | 30.0% | |
| TAACTATTGGTGTATTCCTT+GGG | + | chr2.3:54731580-54731599 | MS.gene52406:intron | 30.0% | |
| TATGTATCTTACCTCATTGA+GGG | + | chr2.3:54728952-54728971 | MS.gene52406:intron | 30.0% | |
| TCAGCCAATATTTACCATTT+CGG | - | chr2.3:54730758-54730777 | None:intergenic | 30.0% | |
| TCTCTCTATCAAACTCTTAA+TGG | + | chr2.3:54729641-54729660 | MS.gene52406:intron | 30.0% | |
| TGACATTTCAGAAACTTCTT+GGG | - | chr2.3:54729263-54729282 | None:intergenic | 30.0% | |
| TGGACAAGTTCAAATTTACT+TGG | - | chr2.3:54731642-54731661 | None:intergenic | 30.0% | |
| TTAAACCAGCAAGAAAACAA+TGG | - | chr2.3:54732366-54732385 | None:intergenic | 30.0% | |
| TTAACTATTGGTGTATTCCT+TGG | + | chr2.3:54731579-54731598 | MS.gene52406:intron | 30.0% | |
| TTGATATACCTAAATTGTGC+AGG | + | chr2.3:54729190-54729209 | MS.gene52406:intron | 30.0% | |
| TTTCTATGTCTTCACTTTCT+TGG | + | chr2.3:54731788-54731807 | MS.gene52406:intron | 30.0% | |
| ! | AACTCTAATTTGAGTTTGGT+AGG | + | chr2.3:54731814-54731833 | MS.gene52406:intron | 30.0% |
| ! | ACCTTTTTCTACAAAAAGGT+AGG | + | chr2.3:54729293-54729312 | MS.gene52406:intron | 30.0% |
| ! | CAACACCTTTTTCTACAAAA+AGG | + | chr2.3:54729289-54729308 | MS.gene52406:CDS | 30.0% |
| ! | CACATGTATCCTATCATTTT+TGG | - | chr2.3:54730926-54730945 | None:intergenic | 30.0% |
| ! | TCATGAGAGTTCTAATATTG+AGG | + | chr2.3:54729006-54729025 | MS.gene52406:CDS | 30.0% |
| ! | TCCTACCTTTTTGTAGAAAA+AGG | - | chr2.3:54729297-54729316 | None:intergenic | 30.0% |
| ! | TTTTACGAGGAATTATGACA+AGG | + | chr2.3:54727861-54727880 | MS.gene52406:CDS | 30.0% |
| !! | GTGGATTGGTATGAAAATTT+GGG | - | chr2.3:54727673-54727692 | None:intergenic | 30.0% |
| !! | TCAAATGCGACACTTATTTT+GGG | - | chr2.3:54731488-54731507 | None:intergenic | 30.0% |
| !! | TGATTGATTTGGATTCAGAT+GGG | + | chr2.3:54727938-54727957 | MS.gene52406:CDS | 30.0% |
| !!! | ATCTGCATGGTTATTTTTTG+TGG | + | chr2.3:54730381-54730400 | MS.gene52406:intron | 30.0% |
| !!! | GATTCCGTTGATTTTTTCAT+GGG | + | chr2.3:54727832-54727851 | MS.gene52406:CDS | 30.0% |
| !!! | GGTTATTTTTTGTGGGAATT+TGG | + | chr2.3:54730389-54730408 | MS.gene52406:intron | 30.0% |
| !!! | GTTGAATTTTTTAGGTCTAC+AGG | - | chr2.3:54727785-54727804 | None:intergenic | 30.0% |
| !!! | TCATGGGTAATTTTTTTACG+AGG | + | chr2.3:54727848-54727867 | MS.gene52406:CDS | 30.0% |
| !!! | TCTGCATGGTTATTTTTTGT+GGG | + | chr2.3:54730382-54730401 | MS.gene52406:intron | 30.0% |
| AACTATTGGTGTATTCCTTG+GGG | + | chr2.3:54731581-54731600 | MS.gene52406:intron | 35.0% | |
| AAGACTTCCAATGATTGAAC+AGG | - | chr2.3:54730433-54730452 | None:intergenic | 35.0% | |
| AAGATATTGATGTAAGCACC+TGG | + | chr2.3:54731234-54731253 | MS.gene52406:CDS | 35.0% | |
| AAGGACACAAGACAAATACA+AGG | - | chr2.3:54731910-54731929 | None:intergenic | 35.0% | |
| AAGGCATGTGTTCCTATAAA+TGG | - | chr2.3:54732453-54732472 | None:intergenic | 35.0% | |
| AATCATCAAATCATACCGGT+TGG | - | chr2.3:54728904-54728923 | None:intergenic | 35.0% | |
| AGATATTGATGTAAGCACCT+GGG | + | chr2.3:54731235-54731254 | MS.gene52406:CDS | 35.0% | |
| AGATGGTTGAGAAATAGAGA+TGG | - | chr2.3:54727641-54727660 | None:intergenic | 35.0% | |
| AGGATAGTGCTATCTATTTG+AGG | + | chr2.3:54728513-54728532 | MS.gene52406:intron | 35.0% | |
| ATTACAAATCTGTCCGAAGA+TGG | + | chr2.3:54730055-54730074 | MS.gene52406:CDS | 35.0% | |
| ATTACTGGTGCTTAGTAATG+TGG | + | chr2.3:54728750-54728769 | MS.gene52406:intron | 35.0% | |
| CAAGTTCAAATTTACTTGGG+AGG | - | chr2.3:54731638-54731657 | None:intergenic | 35.0% | |
| CAGCAAGAAAACAATGGTAT+TGG | - | chr2.3:54732360-54732379 | None:intergenic | 35.0% | |
| CAGTATCTTGACTCATTGAA+AGG | + | chr2.3:54730284-54730303 | MS.gene52406:CDS | 35.0% | |
| CATATTTGGCATGGAATATG+CGG | - | chr2.3:54729732-54729751 | None:intergenic | 35.0% | |
| CATGAACACTTGAAAGATCA+TGG | - | chr2.3:54728104-54728123 | None:intergenic | 35.0% | |
| CTAAGGGAAAATCATCTCAT+CGG | + | chr2.3:54730499-54730518 | MS.gene52406:intron | 35.0% | |
| CTGGTAAAGACAACAAATCA+GGG | - | chr2.3:54730195-54730214 | None:intergenic | 35.0% | |
| CTTTCAATGAGTCAAGATAC+TGG | - | chr2.3:54730286-54730305 | None:intergenic | 35.0% | |
| GACGAAGTAAAAGACAAAAC+TGG | + | chr2.3:54731209-54731228 | MS.gene52406:CDS | 35.0% | |
| GAGATGAAGGATGTTGAAAT+TGG | + | chr2.3:54728012-54728031 | MS.gene52406:CDS | 35.0% | |
| GAGTTTGATAGAGAGATAAG+AGG | - | chr2.3:54729637-54729656 | None:intergenic | 35.0% | |
| GAGTTTGGTAGGATTGAAAA+TGG | + | chr2.3:54731825-54731844 | MS.gene52406:intron | 35.0% | |
| GCCAAATCATCAAATCATAC+CGG | - | chr2.3:54728908-54728927 | None:intergenic | 35.0% | |
| GTCTACACAAACAAATGCTT+CGG | - | chr2.3:54729400-54729419 | None:intergenic | 35.0% | |
| GTGTATAAGAAGTTGCTTCA+GGG | + | chr2.3:54728123-54728142 | MS.gene52406:CDS | 35.0% | |
| GTTCTTCATCATCTGTTAGA+GGG | - | chr2.3:54728857-54728876 | None:intergenic | 35.0% | |
| TAATTATGGTTTAGATGCGG+TGG | + | chr2.3:54728612-54728631 | MS.gene52406:intron | 35.0% | |
| TCAATTGTTAAGGCCTAAGA+AGG | + | chr2.3:54728221-54728240 | MS.gene52406:CDS | 35.0% | |
| TCTAACAGATGATGAAGAAC+AGG | + | chr2.3:54728857-54728876 | MS.gene52406:CDS | 35.0% | |
| TCTACACAAACAAATGCTTC+GGG | - | chr2.3:54729399-54729418 | None:intergenic | 35.0% | |
| TCTGGTAAAGACAACAAATC+AGG | - | chr2.3:54730196-54730215 | None:intergenic | 35.0% | |
| TCTTGACTCATTGAAAGGAA+TGG | + | chr2.3:54730289-54730308 | MS.gene52406:CDS | 35.0% | |
| TGAAAACCAGAGTAGTATTC+AGG | - | chr2.3:54728810-54728829 | None:intergenic | 35.0% | |
| TGACATAGATACTACAACAC+CGG | + | chr2.3:54728338-54728357 | MS.gene52406:intron | 35.0% | |
| TGATCTGCATAAGTTGTCAA+TGG | - | chr2.3:54730659-54730678 | None:intergenic | 35.0% | |
| TGGTAAAGACAACAAATCAG+GGG | - | chr2.3:54730194-54730213 | None:intergenic | 35.0% | |
| TGTGTATAAGAAGTTGCTTC+AGG | + | chr2.3:54728122-54728141 | MS.gene52406:CDS | 35.0% | |
| TGTTCTTCATCATCTGTTAG+AGG | - | chr2.3:54728858-54728877 | None:intergenic | 35.0% | |
| TTAAAGGCTTCAAGACAAGA+GGG | - | chr2.3:54731019-54731038 | None:intergenic | 35.0% | |
| TTTAAAGGCTTCAAGACAAG+AGG | - | chr2.3:54731020-54731039 | None:intergenic | 35.0% | |
| ! | ACCGGTATGATTTGATGATT+TGG | + | chr2.3:54728904-54728923 | MS.gene52406:intron | 35.0% |
| ! | AGTTCTAATATTGAGGTGTC+AGG | + | chr2.3:54729013-54729032 | MS.gene52406:CDS | 35.0% |
| ! | ATGGTAAATATTGGCTGACA+TGG | + | chr2.3:54730760-54730779 | MS.gene52406:intron | 35.0% |
| ! | CAAAAGTTTTGCTACTGAAC+AGG | + | chr2.3:54731982-54732001 | MS.gene52406:intron | 35.0% |
| ! | CAATACCATTGTTTTCTTGC+TGG | + | chr2.3:54732358-54732377 | MS.gene52406:intron | 35.0% |
| ! | GCCAAACACAGTATATTTTC+AGG | - | chr2.3:54729688-54729707 | None:intergenic | 35.0% |
| ! | GTCAAATGCGACACTTATTT+TGG | - | chr2.3:54731489-54731508 | None:intergenic | 35.0% |
| ! | GTTCTTTTCTCTACGAATGA+AGG | - | chr2.3:54731446-54731465 | None:intergenic | 35.0% |
| ! | TGATATTGCTGGCGATTTTT+GGG | + | chr2.3:54730730-54730749 | MS.gene52406:intron | 35.0% |
| ! | TGGTTAGTGTTGCTGTTATA+TGG | + | chr2.3:54728550-54728569 | MS.gene52406:intron | 35.0% |
| ! | TTTTCCCTTAGCTTAATCTC+AGG | - | chr2.3:54730490-54730509 | None:intergenic | 35.0% |
| !! | AAAAGTGCTGGTAAAGTTTC+TGG | + | chr2.3:54730325-54730344 | MS.gene52406:intron | 35.0% |
| !! | GATTGATTTGGATTCAGATG+GGG | + | chr2.3:54727939-54727958 | MS.gene52406:CDS | 35.0% |
| !! | GGTGGATTGGTATGAAAATT+TGG | - | chr2.3:54727674-54727693 | None:intergenic | 35.0% |
| !! | GTGATTGATTTGGATTCAGA+TGG | + | chr2.3:54727937-54727956 | MS.gene52406:CDS | 35.0% |
| !!! | AATTTGGGTCGTTTTGAAGA+TGG | - | chr2.3:54727658-54727677 | None:intergenic | 35.0% |
| !!! | CGATTCCGTTGATTTTTTCA+TGG | + | chr2.3:54727831-54727850 | MS.gene52406:CDS | 35.0% |
| !!! | GAAGCATTTCATTTTTTGGC+AGG | + | chr2.3:54732086-54732105 | MS.gene52406:intron | 35.0% |
| !!! | GTTGCTCTGTTATTTTCTGA+AGG | + | chr2.3:54731055-54731074 | MS.gene52406:intron | 35.0% |
| !!! | TGAATACTACTCTGGTTTTC+AGG | + | chr2.3:54728809-54728828 | MS.gene52406:intron | 35.0% |
| AACAGATGATGAAGAACAGG+AGG | + | chr2.3:54728860-54728879 | MS.gene52406:CDS | 40.0% | |
| ACCTCAACAAGTTCCTTCTT+AGG | - | chr2.3:54728237-54728256 | None:intergenic | 40.0% | |
| AGTCACCTGAGATTAAGCTA+AGG | + | chr2.3:54730482-54730501 | MS.gene52406:intron | 40.0% | |
| ATCTTACCTCATTGAGGGTT+TGG | + | chr2.3:54728957-54728976 | MS.gene52406:intron | 40.0% | |
| ATGCTTCGGGAAGAGTAAAA+TGG | - | chr2.3:54729386-54729405 | None:intergenic | 40.0% | |
| ATGGACGACTCAAAGGAAAT+TGG | + | chr2.3:54730074-54730093 | MS.gene52406:CDS | 40.0% | |
| ATTGGCAGTTAATAAGTGGC+AGG | + | chr2.3:54730022-54730041 | MS.gene52406:intron | 40.0% | |
| CAAACTTAGCCACATTGTCA+AGG | + | chr2.3:54730561-54730580 | MS.gene52406:intron | 40.0% | |
| CCAACTGTAAACAAAGAGCA+TGG | - | chr2.3:54729513-54729532 | None:intergenic | 40.0% | |
| CTACTGAACAGGTTTGATTG+CGG | + | chr2.3:54731993-54732012 | MS.gene52406:intron | 40.0% | |
| CTTGACAATGTGGCTAAGTT+TGG | - | chr2.3:54730563-54730582 | None:intergenic | 40.0% | |
| GAAATGCTTCATATCCTACC+TGG | - | chr2.3:54732076-54732095 | None:intergenic | 40.0% | |
| GGCTCCGAAATGGTAAATAT+TGG | + | chr2.3:54730751-54730770 | MS.gene52406:intron | 40.0% | |
| GGCTCTCTTTACTCAACAAT+GGG | - | chr2.3:54729365-54729384 | None:intergenic | 40.0% | |
| GGTTGTTGAGATTCGTGATA+CGG | + | chr2.3:54727990-54728009 | MS.gene52406:CDS | 40.0% | |
| GTCACCTGAGATTAAGCTAA+GGG | + | chr2.3:54730483-54730502 | MS.gene52406:intron | 40.0% | |
| GTTTGTCATTCATGTTTCCC+AGG | + | chr2.3:54731172-54731191 | MS.gene52406:intron | 40.0% | |
| TCATCATTTAACCATGCACC+CGG | - | chr2.3:54729061-54729080 | None:intergenic | 40.0% | |
| TCATCTGTTAGAGGGACAAA+AGG | - | chr2.3:54728849-54728868 | None:intergenic | 40.0% | |
| TCTCAATCTCAATACCTCCT+TGG | - | chr2.3:54732494-54732513 | None:intergenic | 40.0% | |
| TGATGTTAAGACACGGTTCT+TGG | + | chr2.3:54731676-54731695 | MS.gene52406:intron | 40.0% | |
| TGGACGACTCAAAGGAAATT+GGG | + | chr2.3:54730075-54730094 | MS.gene52406:CDS | 40.0% | |
| TGGCTCTCTTTACTCAACAA+TGG | - | chr2.3:54729366-54729385 | None:intergenic | 40.0% | |
| TGGTTGAGAAATAGAGATGG+TGG | - | chr2.3:54727638-54727657 | None:intergenic | 40.0% | |
| TTCGACATATTCTTTCTCCC+AGG | - | chr2.3:54731255-54731274 | None:intergenic | 40.0% | |
| TTGAAATTGGAGTTCAACGG+CGG | + | chr2.3:54728025-54728044 | MS.gene52406:CDS | 40.0% | |
| TTGGCAGTTAATAAGTGGCA+GGG | + | chr2.3:54730023-54730042 | MS.gene52406:intron | 40.0% | |
| ! | ATGTAGATTGGTGACACAGA+AGG | + | chr2.3:54727906-54727925 | MS.gene52406:CDS | 40.0% |
| ! | CAGTGAATTTCTTGGTGGAT+GGG | - | chr2.3:54730227-54730246 | None:intergenic | 40.0% |
| ! | CCATGCTCTTTGTTTACAGT+TGG | + | chr2.3:54729510-54729529 | MS.gene52406:intron | 40.0% |
| ! | CTGATATTGCTGGCGATTTT+TGG | + | chr2.3:54730729-54730748 | MS.gene52406:intron | 40.0% |
| ! | GTAAATATTGGCTGACATGG+TGG | + | chr2.3:54730763-54730782 | MS.gene52406:intron | 40.0% |
| ! | GTCACCGAAACTTGATAGTA+TGG | + | chr2.3:54731698-54731717 | MS.gene52406:intron | 40.0% |
| ! | TGCATTCTTCAGAGCGTTTA+CGG | - | chr2.3:54727594-54727613 | None:intergenic | 40.0% |
| ! | TTACCAGCACTTTTAGCACA+CGG | - | chr2.3:54730319-54730338 | None:intergenic | 40.0% |
| !! | AATTTTGGTCATACCATGCG+CGG | - | chr2.3:54732334-54732353 | None:intergenic | 40.0% |
| !!! | GACACTTATTTTGGGACAGA+GGG | - | chr2.3:54731480-54731499 | None:intergenic | 40.0% |
| ACCTTCCTGAGCAGGAAAAT+GGG | + | chr2.3:54731276-54731295 | MS.gene52406:CDS | 45.0% | |
| ACTTAGCCACATTGTCAAGG+TGG | + | chr2.3:54730564-54730583 | MS.gene52406:intron | 45.0% | |
| AGAGGGACAAAAGGCTCAAA+TGG | - | chr2.3:54728840-54728859 | None:intergenic | 45.0% | |
| AGCACCAGTGAATTTCTTGG+TGG | - | chr2.3:54730232-54730251 | None:intergenic | 45.0% | |
| AGCCAAAATTCCACCATACC+GGG | - | chr2.3:54730835-54730854 | None:intergenic | 45.0% | |
| AGGAACACATGCCTTACTTC+CGG | + | chr2.3:54732458-54732477 | MS.gene52406:intron | 45.0% | |
| AGGTGTCAGGAGAAAAGATG+CGG | + | chr2.3:54729026-54729045 | MS.gene52406:CDS | 45.0% | |
| ATCAACAGCTGAGCCAAGTA+TGG | + | chr2.3:54730706-54730725 | MS.gene52406:intron | 45.0% | |
| ATCAATGAACTATGGCCCCA+AGG | - | chr2.3:54731599-54731618 | None:intergenic | 45.0% | |
| ATGTAAAAGATCGCGTCCAC+AGG | - | chr2.3:54732411-54732430 | None:intergenic | 45.0% | |
| CAACAACCACCTTGACAATG+TGG | - | chr2.3:54730573-54730592 | None:intergenic | 45.0% | |
| CAATGATGCTTTGATGCCTG+TGG | + | chr2.3:54732392-54732411 | MS.gene52406:intron | 45.0% | |
| CAGTTAATAAGTGGCAGGGA+TGG | + | chr2.3:54730027-54730046 | MS.gene52406:intron | 45.0% | |
| CATCATTTAACCATGCACCC+GGG | - | chr2.3:54729060-54729079 | None:intergenic | 45.0% | |
| CCAAGAAATTCACTGGTGCT+TGG | + | chr2.3:54730232-54730251 | MS.gene52406:CDS | 45.0% | |
| CCAAGCACCAGTGAATTTCT+TGG | - | chr2.3:54730235-54730254 | None:intergenic | 45.0% | |
| CCAAGTATGGCTGATATTGC+TGG | + | chr2.3:54730719-54730738 | MS.gene52406:intron | 45.0% | |
| CCAGCAATATCAGCCATACT+TGG | - | chr2.3:54730722-54730741 | None:intergenic | 45.0% | |
| CCAGTGAATTTCTTGGTGGA+TGG | - | chr2.3:54730228-54730247 | None:intergenic | 45.0% | |
| CCATCCACCAAGAAATTCAC+TGG | + | chr2.3:54730225-54730244 | MS.gene52406:CDS | 45.0% | |
| CTGGTGCTTAGTAATGTGGA+CGG | + | chr2.3:54728754-54728773 | MS.gene52406:intron | 45.0% | |
| GACACATAGAACTGCGACAT+TGG | + | chr2.3:54728365-54728384 | MS.gene52406:intron | 45.0% | |
| GAGCCAAAATTCCACCATAC+CGG | - | chr2.3:54730836-54730855 | None:intergenic | 45.0% | |
| GATTCGTGATACGGAGATGA+AGG | + | chr2.3:54727999-54728018 | MS.gene52406:CDS | 45.0% | |
| GCATTAGTCAAAGCCGAATC+CGG | - | chr2.3:54728063-54728082 | None:intergenic | 45.0% | |
| GGAGAAGGTGGTGATTGATT+TGG | + | chr2.3:54727927-54727946 | MS.gene52406:CDS | 45.0% | |
| GGGTGCATGGTTAAATGATG+AGG | + | chr2.3:54729060-54729079 | MS.gene52406:CDS | 45.0% | |
| GGTGGATGGGTACAAATATC+TGG | - | chr2.3:54730214-54730233 | None:intergenic | 45.0% | |
| GTCTACATAGTACCTAGCCT+GGG | - | chr2.3:54731192-54731211 | None:intergenic | 45.0% | |
| GTGAACTTCACGGAGGAATT+GGG | - | chr2.3:54727758-54727777 | None:intergenic | 45.0% | |
| GTTCTGCAGGAGGAAGATAT+TGG | + | chr2.3:54728979-54728998 | MS.gene52406:intron | 45.0% | |
| TCATTCATGTTTCCCAGGCT+AGG | + | chr2.3:54731177-54731196 | MS.gene52406:intron | 45.0% | |
| TCCATGCCAAATATGCCACA+GGG | + | chr2.3:54729737-54729756 | MS.gene52406:intron | 45.0% | |
| TCCTTTGAGTCGTCCATCTT+CGG | - | chr2.3:54730071-54730090 | None:intergenic | 45.0% | |
| TCTAGAAACGATGGCGTTTG+AGG | - | chr2.3:54727710-54727729 | None:intergenic | 45.0% | |
| TGAACTTCACGGAGGAATTG+GGG | - | chr2.3:54727757-54727776 | None:intergenic | 45.0% | |
| TGGTGCTTAGTAATGTGGAC+GGG | + | chr2.3:54728755-54728774 | MS.gene52406:intron | 45.0% | |
| TGGTTGCCTGAATACTACTC+TGG | + | chr2.3:54728801-54728820 | MS.gene52406:intron | 45.0% | |
| TTCCATGCCAAATATGCCAC+AGG | + | chr2.3:54729736-54729755 | MS.gene52406:intron | 45.0% | |
| ! | ACAAACCCATTTTCCTGCTC+AGG | - | chr2.3:54731284-54731303 | None:intergenic | 45.0% |
| ! | AGATGGTGGTGTGATTGTTG+AGG | - | chr2.3:54727624-54727643 | None:intergenic | 45.0% |
| ! | ATCATCTCATCGGTTGCTCA+TGG | + | chr2.3:54730509-54730528 | MS.gene52406:intron | 45.0% |
| ! | ATTGGTGACACAGAAGGAGA+AGG | + | chr2.3:54727912-54727931 | MS.gene52406:CDS | 45.0% |
| ! | CATCAAATCATACCGGTTGG+AGG | - | chr2.3:54728901-54728920 | None:intergenic | 45.0% |
| ! | GGATTCGGCTTTGACTAATG+CGG | + | chr2.3:54728062-54728081 | MS.gene52406:CDS | 45.0% |
| ! | TGATTTGGATTCAGATGGGG+AGG | + | chr2.3:54727942-54727961 | MS.gene52406:CDS | 45.0% |
| ! | TGGTCTTTTTAAACCGCGCA+TGG | + | chr2.3:54732318-54732337 | MS.gene52406:intron | 45.0% |
| ! | TTATGACAAGGCGAAGCGTT+CGG | + | chr2.3:54727873-54727892 | MS.gene52406:CDS | 45.0% |
| ! | TTCGGATGATTCTGGTGTTG+TGG | + | chr2.3:54727966-54727985 | MS.gene52406:CDS | 45.0% |
| !! | GCCTAAGAAGGAACTTGTTG+AGG | + | chr2.3:54728233-54728252 | MS.gene52406:CDS | 45.0% |
| !! | TATGCCGACTTCTATAGCAG+AGG | + | chr2.3:54732032-54732051 | MS.gene52406:CDS | 45.0% |
| !!! | CGACACTTATTTTGGGACAG+AGG | - | chr2.3:54731481-54731500 | None:intergenic | 45.0% |
| !!! | GGTCTGTGTTTTAACCAGGT+AGG | + | chr2.3:54732059-54732078 | MS.gene52406:intron | 45.0% |
| AAATTCCACCATACCGGGAC+CGG | - | chr2.3:54730830-54730849 | None:intergenic | 50.0% | |
| ACGGGAGAGTCTAGAAACGA+TGG | - | chr2.3:54727719-54727738 | None:intergenic | 50.0% | |
| AGAAACGATGGCGTTTGAGG+TGG | - | chr2.3:54727707-54727726 | None:intergenic | 50.0% | |
| AGGCTTCAAGACAAGAGGGT+AGG | - | chr2.3:54731015-54731034 | None:intergenic | 50.0% | |
| ATGCCACAGGGAACAGCAAA+GGG | + | chr2.3:54729749-54729768 | MS.gene52406:intron | 50.0% | |
| CAGGCCTCTGCTATAGAAGT+CGG | - | chr2.3:54732039-54732058 | None:intergenic | 50.0% | |
| CCTGAAAAGATGGGGAGTCA+AGG | - | chr2.3:54731929-54731948 | None:intergenic | 50.0% | |
| CCTGGTTAAAACACAGACCC+AGG | - | chr2.3:54732058-54732077 | None:intergenic | 50.0% | |
| CGTCTACATAGTACCTAGCC+TGG | - | chr2.3:54731193-54731212 | None:intergenic | 50.0% | |
| CGTGAACTTCACGGAGGAAT+TGG | - | chr2.3:54727759-54727778 | None:intergenic | 50.0% | |
| GACCTTCCTGAGCAGGAAAA+TGG | + | chr2.3:54731275-54731294 | MS.gene52406:CDS | 50.0% | |
| GACTAATGCGGTGGTGAATG+TGG | + | chr2.3:54728074-54728093 | MS.gene52406:CDS | 50.0% | |
| GACTTCTATAGCAGAGGCCT+GGG | + | chr2.3:54732038-54732057 | MS.gene52406:CDS | 50.0% | |
| GACTTGTGCCAGTGTTGTGT+CGG | + | chr2.3:54728449-54728468 | MS.gene52406:intron | 50.0% | |
| GCAGAACCAAACCCTCAATG+AGG | - | chr2.3:54728966-54728985 | None:intergenic | 50.0% | |
| GCAGTTCTATGTGTCGTGTC+CGG | - | chr2.3:54728360-54728379 | None:intergenic | 50.0% | |
| GCTGTTCCCTGTGGCATATT+TGG | - | chr2.3:54729746-54729765 | None:intergenic | 50.0% | |
| GCTTAGTAATGTGGACGGGT+TGG | + | chr2.3:54728759-54728778 | MS.gene52406:intron | 50.0% | |
| GGATTCAGATGGGGAGGATT+CGG | + | chr2.3:54727948-54727967 | MS.gene52406:CDS | 50.0% | |
| GGTGGTGTGATTGTTGAGGA+CGG | - | chr2.3:54727620-54727639 | None:intergenic | 50.0% | |
| GTTACGATGGCACCACAAAG+CGG | + | chr2.3:54730804-54730823 | MS.gene52406:intron | 50.0% | |
| TATGCCACAGGGAACAGCAA+AGG | + | chr2.3:54729748-54729767 | MS.gene52406:intron | 50.0% | |
| TCCCTGTGGCATATTTGGCA+TGG | - | chr2.3:54729741-54729760 | None:intergenic | 50.0% | |
| TCCGAAGATGGACGACTCAA+AGG | + | chr2.3:54730067-54730086 | MS.gene52406:CDS | 50.0% | |
| TCCGCCATAATCCGTTACGA+TGG | + | chr2.3:54730791-54730810 | MS.gene52406:intron | 50.0% | |
| TCCTAATCTAGCGCTGTCGA+TGG | - | chr2.3:54730873-54730892 | None:intergenic | 50.0% | |
| TCGACAGCGCTAGATTAGGA+AGG | + | chr2.3:54730873-54730892 | MS.gene52406:intron | 50.0% | |
| TTCACGGAGGAATTGGGGTT+TGG | - | chr2.3:54727752-54727771 | None:intergenic | 50.0% | |
| ! | ACCCATTTTCCTGCTCAGGA+AGG | - | chr2.3:54731280-54731299 | None:intergenic | 50.0% |
| ! | ACCTCGAGTTGCTGAAAGAG+AGG | + | chr2.3:54729225-54729244 | MS.gene52406:CDS | 50.0% |
| ! | AGAGCGTTTACGGTTGCTTG+TGG | - | chr2.3:54727584-54727603 | None:intergenic | 50.0% |
| ! | ATGGCGTTTGAGGTGGAAAC+GGG | - | chr2.3:54727700-54727719 | None:intergenic | 50.0% |
| ! | CCTCGAGTTGCTGAAAGAGA+GGG | + | chr2.3:54729226-54729245 | MS.gene52406:CDS | 50.0% |
| ! | CCTTGACTCCCCATCTTTTC+AGG | + | chr2.3:54731926-54731945 | MS.gene52406:intron | 50.0% |
| ! | GATGGCGTTTGAGGTGGAAA+CGG | - | chr2.3:54727701-54727720 | None:intergenic | 50.0% |
| ! | GGCGTTGGGGAAATGTAGAT+TGG | + | chr2.3:54727894-54727913 | MS.gene52406:CDS | 50.0% |
| ! | GTGTTGTGTCGGTGCTCTAT+AGG | + | chr2.3:54728460-54728479 | MS.gene52406:intron | 50.0% |
| ! | TAGCCGTGTGCTAAAAGTGC+TGG | + | chr2.3:54730313-54730332 | MS.gene52406:CDS | 50.0% |
| ! | TGCTTCAGGGTGTTCAGAGA+AGG | + | chr2.3:54728136-54728155 | MS.gene52406:CDS | 50.0% |
| ! | TTCGGCTTTGACTAATGCGG+TGG | + | chr2.3:54728065-54728084 | MS.gene52406:CDS | 50.0% |
| !! | AAACCCTTTGCTGTTCCCTG+TGG | - | chr2.3:54729755-54729774 | None:intergenic | 50.0% |
| !! | AGGAATTGGGGTTTGGTGTC+TGG | - | chr2.3:54727745-54727764 | None:intergenic | 50.0% |
| !! | ATAGAGCACCGACACAACAC+TGG | - | chr2.3:54728460-54728479 | None:intergenic | 50.0% |
| !! | CATTGAGGGTTTGGTTCTGC+AGG | + | chr2.3:54728966-54728985 | MS.gene52406:intron | 50.0% |
| !! | GCCATCGTAACGGATTATGG+CGG | - | chr2.3:54730795-54730814 | None:intergenic | 50.0% |
| !! | GCGATTTTTGGGCTCCGAAA+TGG | + | chr2.3:54730741-54730760 | MS.gene52406:intron | 50.0% |
| !! | GCTTTGTGGTGCCATCGTAA+CGG | - | chr2.3:54730805-54730824 | None:intergenic | 50.0% |
| !! | GGAATTGGGGTTTGGTGTCT+GGG | - | chr2.3:54727744-54727763 | None:intergenic | 50.0% |
| !! | GGATGATTCTGGTGTTGTGG+AGG | + | chr2.3:54727969-54727988 | MS.gene52406:CDS | 50.0% |
| !! | GGTGCCATCGTAACGGATTA+TGG | - | chr2.3:54730798-54730817 | None:intergenic | 50.0% |
| !! | GTCCCGGTATGGTGGAATTT+TGG | + | chr2.3:54730830-54730849 | MS.gene52406:intron | 50.0% |
| !!! | CCTGGGTCTGTGTTTTAACC+AGG | + | chr2.3:54732055-54732074 | MS.gene52406:CDS | 50.0% |
| !!! | GGAATTTTGGCTCTCCACCA+TGG | + | chr2.3:54730843-54730862 | MS.gene52406:intron | 50.0% |
| !!! | TATTTTGGGACAGAGGGAGC+AGG | - | chr2.3:54731474-54731493 | None:intergenic | 50.0% |
| AAAGATGCGGTGCCTTCTCC+CGG | + | chr2.3:54729039-54729058 | MS.gene52406:CDS | 55.0% | |
| CCCTCTCTTTCAGCAACTCG+AGG | - | chr2.3:54729229-54729248 | None:intergenic | 55.0% | |
| CGACTTCTATAGCAGAGGCC+TGG | + | chr2.3:54732037-54732056 | MS.gene52406:CDS | 55.0% | |
| GCCATCGACAGCGCTAGATT+AGG | + | chr2.3:54730869-54730888 | MS.gene52406:intron | 55.0% | |
| GGGGAGGATTCGGATGATTC+TGG | + | chr2.3:54727958-54727977 | MS.gene52406:CDS | 55.0% | |
| GGTGACACAGAAGGAGAAGG+TGG | + | chr2.3:54727915-54727934 | MS.gene52406:CDS | 55.0% | |
| TACAGGGCGCGTGAACTTCA+CGG | - | chr2.3:54727768-54727787 | None:intergenic | 55.0% | |
| TGGAGTTCAACGGCGGTCAT+CGG | + | chr2.3:54728032-54728051 | MS.gene52406:CDS | 55.0% | |
| TGTCGAAGACCTTCCTGAGC+AGG | + | chr2.3:54731268-54731287 | MS.gene52406:CDS | 55.0% | |
| TTAACCATGCACCCGGGAGA+AGG | - | chr2.3:54729054-54729073 | None:intergenic | 55.0% | |
| ! | CGTTTGAGGTGGAAACGGGT+CGG | - | chr2.3:54727696-54727715 | None:intergenic | 55.0% |
| ! | CTTGCGCGTTTTCCTCCAAC+CGG | + | chr2.3:54728886-54728905 | MS.gene52406:CDS | 55.0% |
| ! | GTTTGAGGTGGAAACGGGTC+GGG | - | chr2.3:54727695-54727714 | None:intergenic | 55.0% |
| !! | GGGGTTTGGTGTCTGGGTAA+CGG | - | chr2.3:54727738-54727757 | None:intergenic | 55.0% |
| !! | GGGTTTGGTGTCTGGGTAAC+GGG | - | chr2.3:54727737-54727756 | None:intergenic | 55.0% |
| !! | TGAGGGTTTGGTTCTGCAGG+AGG | + | chr2.3:54728969-54728988 | MS.gene52406:intron | 55.0% |
| AAGATGCGGTGCCTTCTCCC+GGG | + | chr2.3:54729040-54729059 | MS.gene52406:CDS | 60.0% | |
| ACATGCCTTACTTCCGGCGC+AGG | + | chr2.3:54732464-54732483 | MS.gene52406:CDS | 60.0% | |
| CTGTCGATGGCAGTCCATGG+TGG | - | chr2.3:54730860-54730879 | None:intergenic | 60.0% | |
| GGAGTTCAACGGCGGTCATC+GGG | + | chr2.3:54728033-54728052 | MS.gene52406:CDS | 60.0% | |
| GTCATCGGGTTCGCCGGATT+CGG | + | chr2.3:54728047-54728066 | MS.gene52406:CDS | 60.0% | |
| TGGAAACGGGTCGGGTGGAT+TGG | - | chr2.3:54727687-54727706 | None:intergenic | 60.0% | |
| ! | AAGGCGAAGCGTTCGGCGTT+GGG | + | chr2.3:54727880-54727899 | MS.gene52406:CDS | 60.0% |
| AGGGCGCGTGAACTTCACGG+AGG | - | chr2.3:54727765-54727784 | None:intergenic | 65.0% | |
| CGATGGCACCACAAAGCGGC+CGG | + | chr2.3:54730808-54730827 | MS.gene52406:intron | 65.0% | |
| GCGCTGTCGATGGCAGTCCA+TGG | - | chr2.3:54730863-54730882 | None:intergenic | 65.0% | |
| GCTGTCCTGCGCCGGAAGTA+AGG | - | chr2.3:54732472-54732491 | None:intergenic | 65.0% | |
| TGAGGTGGAAACGGGTCGGG+TGG | - | chr2.3:54727692-54727711 | None:intergenic | 65.0% | |
| ! | AGGCGAAGCGTTCGGCGTTG+GGG | + | chr2.3:54727881-54727900 | MS.gene52406:CDS | 65.0% |
| ! | CAAGGCGAAGCGTTCGGCGT+TGG | + | chr2.3:54727879-54727898 | MS.gene52406:CDS | 65.0% |
| ACGGCGGTCATCGGGTTCGC+CGG | + | chr2.3:54728041-54728060 | MS.gene52406:CDS | 70.0% | |
| CAAAGCGGCCGGTCCCGGTA+TGG | + | chr2.3:54730819-54730838 | MS.gene52406:intron | 70.0% | |
| CACCACAAAGCGGCCGGTCC+CGG | + | chr2.3:54730814-54730833 | MS.gene52406:intron | 70.0% | |
| CCTCCTTGGCTGTCCTGCGC+CGG | - | chr2.3:54732480-54732499 | None:intergenic | 70.0% | |
| CTTCCGGCGCAGGACAGCCA+AGG | + | chr2.3:54732474-54732493 | MS.gene52406:CDS | 70.0% | |
| GGTGCCTTCTCCCGGGTGCA+TGG | + | chr2.3:54729047-54729066 | MS.gene52406:CDS | 70.0% | |
| ! | TACCGGGACCGGCCGCTTTG+TGG | - | chr2.3:54730819-54730838 | None:intergenic | 70.0% |
| AGCGGCCGGTCCCGGTATGG+TGG | + | chr2.3:54730822-54730841 | MS.gene52406:intron | 75.0% | |
| CCGGCGCAGGACAGCCAAGG+AGG | + | chr2.3:54732477-54732496 | MS.gene52406:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 54727571 | 54732522 | 54727571 | ID=MS.gene52406 |
| chr2.3 | mRNA | 54727571 | 54732522 | 54727571 | ID=MS.gene52406.t1;Parent=MS.gene52406 |
| chr2.3 | exon | 54727571 | 54728254 | 54727571 | ID=MS.gene52406.t1.exon1;Parent=MS.gene52406.t1 |
| chr2.3 | CDS | 54727571 | 54728254 | 54727571 | ID=cds.MS.gene52406.t1;Parent=MS.gene52406.t1 |
| chr2.3 | exon | 54728831 | 54728907 | 54728831 | ID=MS.gene52406.t1.exon2;Parent=MS.gene52406.t1 |
| chr2.3 | CDS | 54728831 | 54728907 | 54728831 | ID=cds.MS.gene52406.t1;Parent=MS.gene52406.t1 |
| chr2.3 | exon | 54728988 | 54729081 | 54728988 | ID=MS.gene52406.t1.exon3;Parent=MS.gene52406.t1 |
| chr2.3 | CDS | 54728988 | 54729081 | 54728988 | ID=cds.MS.gene52406.t1;Parent=MS.gene52406.t1 |
| chr2.3 | exon | 54729212 | 54729310 | 54729212 | ID=MS.gene52406.t1.exon4;Parent=MS.gene52406.t1 |
| chr2.3 | CDS | 54729212 | 54729310 | 54729212 | ID=cds.MS.gene52406.t1;Parent=MS.gene52406.t1 |
| chr2.3 | exon | 54730030 | 54730122 | 54730030 | ID=MS.gene52406.t1.exon5;Parent=MS.gene52406.t1 |
| chr2.3 | CDS | 54730030 | 54730122 | 54730030 | ID=cds.MS.gene52406.t1;Parent=MS.gene52406.t1 |
| chr2.3 | exon | 54730215 | 54730334 | 54730215 | ID=MS.gene52406.t1.exon6;Parent=MS.gene52406.t1 |
| chr2.3 | CDS | 54730215 | 54730334 | 54730215 | ID=cds.MS.gene52406.t1;Parent=MS.gene52406.t1 |
| chr2.3 | exon | 54731194 | 54731297 | 54731194 | ID=MS.gene52406.t1.exon7;Parent=MS.gene52406.t1 |
| chr2.3 | CDS | 54731194 | 54731297 | 54731194 | ID=cds.MS.gene52406.t1;Parent=MS.gene52406.t1 |
| chr2.3 | exon | 54732004 | 54732076 | 54732004 | ID=MS.gene52406.t1.exon8;Parent=MS.gene52406.t1 |
| chr2.3 | CDS | 54732004 | 54732076 | 54732004 | ID=cds.MS.gene52406.t1;Parent=MS.gene52406.t1 |
| chr2.3 | exon | 54732460 | 54732522 | 54732460 | ID=MS.gene52406.t1.exon9;Parent=MS.gene52406.t1 |
| chr2.3 | CDS | 54732460 | 54732522 | 54732460 | ID=cds.MS.gene52406.t1;Parent=MS.gene52406.t1 |
| Gene Sequence |
| Protein sequence |