Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54883.t1 | XP_024638161.1 | 88.8 | 286 | 18 | 1 | 2 | 273 | 1 | 286 | 1.00E-136 | 496.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54883.t1 | Q9LDC0 | 66.4 | 286 | 77 | 5 | 2 | 273 | 1 | 281 | 1.1e-99 | 364.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54883.t1 | G7JTJ9 | 88.8 | 286 | 18 | 1 | 2 | 273 | 1 | 286 | 7.4e-137 | 496.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene54883 | 0.802416 | 5.67E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene54883 | 0.856109 | 4.02E-62 | -1.69E-46 |
| MS.gene049404 | MS.gene54883 | 0.809376 | 1.95E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene54883 | 0.821896 | 3.16E-53 | -1.69E-46 |
| MS.gene050026 | MS.gene54883 | 0.81008 | 1.38E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene54883 | 0.802894 | 4.52E-49 | -1.69E-46 |
| MS.gene050273 | MS.gene54883 | 0.816661 | 4.93E-52 | -1.69E-46 |
| MS.gene050559 | MS.gene54883 | 0.835122 | 2.02E-56 | -1.69E-46 |
| MS.gene050561 | MS.gene54883 | 0.836001 | 1.21E-56 | -1.69E-46 |
| MS.gene050562 | MS.gene54883 | 0.831033 | 2.10E-55 | -1.69E-46 |
| MS.gene050719 | MS.gene54883 | 0.80076 | 1.24E-48 | -1.69E-46 |
| MS.gene050780 | MS.gene54883 | 0.82121 | 4.56E-53 | -1.69E-46 |
| MS.gene050807 | MS.gene54883 | 0.810724 | 1.00E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene54883 | 0.805943 | 1.05E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene54883 | 0.825478 | 4.59E-54 | -1.69E-46 |
| MS.gene051279 | MS.gene54883 | 0.816609 | 5.06E-52 | -1.69E-46 |
| MS.gene051492 | MS.gene54883 | 0.801846 | 7.43E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene54883 | 0.880398 | 5.67E-70 | -1.69E-46 |
| MS.gene051832 | MS.gene54883 | 0.800038 | 1.74E-48 | -1.69E-46 |
| MS.gene052239 | MS.gene54883 | -0.826958 | 2.04E-54 | -1.69E-46 |
| MS.gene052519 | MS.gene54883 | 0.805517 | 1.29E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene54883 | 0.829392 | 5.28E-55 | -1.69E-46 |
| MS.gene052584 | MS.gene54883 | 0.829523 | 4.91E-55 | -1.69E-46 |
| MS.gene053006 | MS.gene54883 | 0.802022 | 6.83E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene54883 | 0.809524 | 1.81E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene54883 | 0.831704 | 1.44E-55 | -1.69E-46 |
| MS.gene05414 | MS.gene54883 | 0.81892 | 1.52E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene54883 | 0.82636 | 2.83E-54 | -1.69E-46 |
| MS.gene054236 | MS.gene54883 | 0.801513 | 8.69E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene54883 | -0.800455 | 1.43E-48 | -1.69E-46 |
| MS.gene054576 | MS.gene54883 | 0.858583 | 7.45E-63 | -1.69E-46 |
| MS.gene054651 | MS.gene54883 | 0.826335 | 2.87E-54 | -1.69E-46 |
| MS.gene054775 | MS.gene54883 | 0.802457 | 5.56E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene54883 | 0.808134 | 3.60E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene54883 | 0.820359 | 7.15E-53 | -1.69E-46 |
| MS.gene055586 | MS.gene54883 | 0.845747 | 3.35E-59 | -1.69E-46 |
| MS.gene055589 | MS.gene54883 | 0.809162 | 2.17E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene54883 | 0.825451 | 4.66E-54 | -1.69E-46 |
| MS.gene056050 | MS.gene54883 | 0.802864 | 4.58E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene54883 | 0.801145 | 1.03E-48 | -1.69E-46 |
| MS.gene056366 | MS.gene54883 | 0.818053 | 2.40E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene54883 | 0.821098 | 4.84E-53 | -1.69E-46 |
| MS.gene056553 | MS.gene54883 | 0.810929 | 9.03E-51 | -1.69E-46 |
| MS.gene05659 | MS.gene54883 | 0.804045 | 2.61E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene54883 | 0.817103 | 3.92E-52 | -1.69E-46 |
| MS.gene05690 | MS.gene54883 | 0.800272 | 1.56E-48 | -1.69E-46 |
| MS.gene057026 | MS.gene54883 | 0.822893 | 1.86E-53 | -1.69E-46 |
| MS.gene057060 | MS.gene54883 | 0.80427 | 2.34E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene54883 | 0.803114 | 4.07E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene54883 | 0.81839 | 2.01E-52 | -1.69E-46 |
| MS.gene057869 | MS.gene54883 | 0.808554 | 2.92E-50 | -1.69E-46 |
| MS.gene05795 | MS.gene54883 | 0.800282 | 1.55E-48 | -1.69E-46 |
| MS.gene058010 | MS.gene54883 | 0.805631 | 1.22E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene54883 | 0.816163 | 6.37E-52 | -1.69E-46 |
| MS.gene058635 | MS.gene54883 | 0.826622 | 2.45E-54 | -1.69E-46 |
| MS.gene058979 | MS.gene54883 | 0.821634 | 3.64E-53 | -1.69E-46 |
| MS.gene05954 | MS.gene54883 | 0.805442 | 1.33E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene54883 | 0.819087 | 1.40E-52 | -1.69E-46 |
| MS.gene060167 | MS.gene54883 | 0.807762 | 4.32E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene54883 | 0.818397 | 2.00E-52 | -1.69E-46 |
| MS.gene060373 | MS.gene54883 | 0.809357 | 1.97E-50 | -1.69E-46 |
| MS.gene060572 | MS.gene54883 | 0.804602 | 2.00E-49 | -1.69E-46 |
| MS.gene060840 | MS.gene54883 | 0.832546 | 8.89E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 72 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATGGAAATGTTCTGTTTC+AGG | 0.222182 | 4.4:+65456972 | MS.gene54883:CDS |
| GCAATTTGAAGGCTTTATTT+AGG | 0.233759 | 4.4:+65458563 | MS.gene54883:CDS |
| TCAACTTCAGAATCAACTTT+TGG | 0.240967 | 4.4:-65455013 | None:intergenic |
| TCTGCCATTGGTGGAACATT+TGG | 0.294220 | 4.4:-65456772 | None:intergenic |
| GGTTACAAAACAAATTATTA+AGG | 0.302747 | 4.4:+65455051 | MS.gene54883:CDS |
| TTATGGTGGTAGTCCATTAC+AGG | 0.321001 | 4.4:+65455761 | MS.gene54883:intron |
| AAATGACTGGCTTGGGCATT+GGG | 0.332295 | 4.4:+65456665 | MS.gene54883:CDS |
| CTGCGTGTGAGCTGGGAATT+AGG | 0.336747 | 4.4:+65456721 | MS.gene54883:CDS |
| CGACCAATTGAGATGGTAAT+AGG | 0.338090 | 4.4:+65455835 | MS.gene54883:CDS |
| GTTTGGGAAGTATAGGGATA+TGG | 0.339954 | 4.4:+65457191 | MS.gene54883:intron |
| GTTTATGAAGTTGAGCTCAT+TGG | 0.387560 | 4.4:+65456799 | MS.gene54883:CDS |
| GGACTACTCAATAATTCTTC+AGG | 0.387637 | 4.4:-65454989 | None:intergenic |
| GAGCGTTGCTGCGTGTGAGC+TGG | 0.407608 | 4.4:+65456713 | MS.gene54883:CDS |
| GTGAGCTGGGAATTAGGATA+TGG | 0.419661 | 4.4:+65456727 | MS.gene54883:CDS |
| TTTCCTATTACCATCTCAAT+TGG | 0.421411 | 4.4:-65455838 | None:intergenic |
| GAAATGACTGGCTTGGGCAT+TGG | 0.428307 | 4.4:+65456664 | MS.gene54883:CDS |
| TGACTGTAGAGGAACGGATT+GGG | 0.429854 | 4.4:+65456929 | MS.gene54883:CDS |
| AAGAAAGAAATGACTGGCTT+GGG | 0.441743 | 4.4:+65456658 | MS.gene54883:CDS |
| GAAAGTACTGAATATGCAAA+AGG | 0.441865 | 4.4:+65454959 | MS.gene54883:CDS |
| ACAAAAGCATGTTGAATACT+TGG | 0.446918 | 4.4:-65455095 | None:intergenic |
| GAAGAAAGAAATGACTGGCT+TGG | 0.461382 | 4.4:+65456657 | MS.gene54883:CDS |
| TCTCAGACCACGCCCTGTAA+TGG | 0.475502 | 4.4:-65455774 | None:intergenic |
| AAAGTACTGAATATGCAAAA+GGG | 0.478686 | 4.4:+65454960 | MS.gene54883:CDS |
| GGGGTGGCAAGCATGAAAGC+TGG | 0.481889 | 4.4:+65456685 | MS.gene54883:CDS |
| GAAGTATAGGGATATGGCTC+TGG | 0.484336 | 4.4:+65457197 | MS.gene54883:intron |
| ATTGAGATGGTAATAGGAAA+AGG | 0.485564 | 4.4:+65455841 | MS.gene54883:CDS |
| GGCTTTATTTAGGAGAGGTA+AGG | 0.490198 | 4.4:+65458573 | MS.gene54883:CDS |
| GACAGGCCGCCGTGTTAAGA+TGG | 0.492108 | 4.4:-65457235 | None:intergenic |
| GGGTGGCAAGCATGAAAGCT+GGG | 0.494339 | 4.4:+65456686 | MS.gene54883:CDS |
| TCATAAACTAAATCTGCCAT+TGG | 0.508037 | 4.4:-65456784 | None:intergenic |
| TGAGGATGAGAGCAATTTGA+AGG | 0.509951 | 4.4:+65458552 | MS.gene54883:CDS |
| ATGACTGTAGAGGAACGGAT+TGG | 0.522055 | 4.4:+65456928 | MS.gene54883:CDS |
| AGGCCATGCAACAGTATGAA+TGG | 0.528797 | 4.4:+65457010 | MS.gene54883:CDS |
| AACGGATTGGGGCAGCAGAT+CGG | 0.529421 | 4.4:+65456941 | MS.gene54883:CDS |
| TAAACTAAATCTGCCATTGG+TGG | 0.530780 | 4.4:-65456781 | None:intergenic |
| AGCGTTGCTGCGTGTGAGCT+GGG | 0.534499 | 4.4:+65456714 | MS.gene54883:CDS |
| GGTAAGGCTAGAGCAGCACT+TGG | 0.543948 | 4.4:+65458589 | MS.gene54883:CDS |
| AAGCATGTTGAATACTTGGA+AGG | 0.544025 | 4.4:-65455091 | None:intergenic |
| GGCAGCAGATCGGAGAAAGA+TGG | 0.546425 | 4.4:+65456951 | MS.gene54883:CDS |
| AGTTGAAGTTCTTCATGAGA+AGG | 0.548105 | 4.4:+65455030 | MS.gene54883:CDS |
| TGGTAGTCCATTACAGGGCG+TGG | 0.549466 | 4.4:+65455767 | MS.gene54883:intron |
| ACAAAACAAATTATTAAGGA+AGG | 0.552128 | 4.4:+65455055 | MS.gene54883:CDS |
| TAAATTTGAAGATACATGGC+AGG | 0.555459 | 4.4:+65455807 | MS.gene54883:CDS |
| GCGGTTCAGCTTAATCAGAC+AGG | 0.561365 | 4.4:-65457252 | None:intergenic |
| GAATTAGGATATGGAAAGGA+AGG | 0.562161 | 4.4:+65456736 | MS.gene54883:CDS |
| CAGGGCGTGGTCTGAGAACA+CGG | 0.563793 | 4.4:+65455780 | MS.gene54883:CDS |
| AACCGCTATGAAGAAGCTAT+AGG | 0.568196 | 4.4:+65457269 | MS.gene54883:CDS |
| GACTGGCTTGGGCATTGGGG+TGG | 0.573654 | 4.4:+65456669 | MS.gene54883:CDS |
| CAAATTATTAAGGAAGGTCA+TGG | 0.574339 | 4.4:+65455061 | MS.gene54883:CDS |
| ACAGAGAAGAAAGAAATGAC+TGG | 0.578132 | 4.4:+65456652 | MS.gene54883:intron |
| GACTGTAGAGGAACGGATTG+GGG | 0.579307 | 4.4:+65456930 | MS.gene54883:CDS |
| TTGAAGGCTTTATTTAGGAG+AGG | 0.585733 | 4.4:+65458568 | MS.gene54883:CDS |
| AGCATAAATTTGAAGATACA+TGG | 0.586003 | 4.4:+65455803 | MS.gene54883:CDS |
| CTGGGAATTAGGATATGGAA+AGG | 0.597900 | 4.4:+65456732 | MS.gene54883:CDS |
| GCAGATCGGAGAAAGATGGA+TGG | 0.599142 | 4.4:+65456955 | MS.gene54883:CDS |
| GCCGCCGTGTTAAGATGGCA+TGG | 0.599939 | 4.4:-65457230 | None:intergenic |
| GTTTCAGGAAAATAAACTAG+AGG | 0.610535 | 4.4:+65456987 | MS.gene54883:CDS |
| TCAGGAAAATAAACTAGAGG+AGG | 0.614029 | 4.4:+65456990 | MS.gene54883:CDS |
| AAGTACTGAATATGCAAAAG+GGG | 0.616531 | 4.4:+65454961 | MS.gene54883:CDS |
| GTCCTATAGCTTCTTCATAG+CGG | 0.623004 | 4.4:-65457271 | None:intergenic |
| GTAAGGCTAGAGCAGCACTT+GGG | 0.626696 | 4.4:+65458590 | MS.gene54883:CDS |
| AATGACTGGCTTGGGCATTG+GGG | 0.631535 | 4.4:+65456666 | MS.gene54883:CDS |
| GTGATATGACTGTAGAGGAA+CGG | 0.631871 | 4.4:+65456923 | MS.gene54883:CDS |
| TATGGTGGTAGTCCATTACA+GGG | 0.637407 | 4.4:+65455762 | MS.gene54883:intron |
| TCGCAGTGATATGACTGTAG+AGG | 0.641089 | 4.4:+65456918 | MS.gene54883:CDS |
| AGATCCATGCCATCTTAACA+CGG | 0.648429 | 4.4:+65457226 | MS.gene54883:CDS |
| AAACTTGCAGGTAATAAGTG+AGG | 0.649161 | 4.4:+65458534 | MS.gene54883:intron |
| GGAGCAACGACCAATTGAGA+TGG | 0.655756 | 4.4:+65455828 | MS.gene54883:CDS |
| TAACCATTCATACTGTTGCA+TGG | 0.657658 | 4.4:-65457013 | None:intergenic |
| GGTGGCAAGCATGAAAGCTG+GGG | 0.672895 | 4.4:+65456687 | MS.gene54883:CDS |
| TCTCAACCACAATCAAAACC+AGG | 0.685386 | 4.4:+65454689 | MS.gene54883:CDS |
| TCCATGCCATCTTAACACGG+CGG | 0.771881 | 4.4:+65457229 | MS.gene54883:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATAAAAATTATAATCA+TGG | + | chr4.4:65457795-65457814 | MS.gene54883:intron | 10.0% |
| !!! | TAAATTGTTATAGTATTTTC+TGG | + | chr4.4:65458445-65458464 | MS.gene54883:intron | 15.0% |
| !!! | TGTATATTTATTTTAGTTCA+TGG | + | chr4.4:65456085-65456104 | MS.gene54883:intron | 15.0% |
| !! | AACAGTTTCAAAAACTAAAT+TGG | - | chr4.4:65455406-65455425 | None:intergenic | 20.0% |
| !! | ACAAAACAAATTATTAAGGA+AGG | + | chr4.4:65455055-65455074 | MS.gene54883:CDS | 20.0% |
| !! | ACTAAAATAAATATACACTC+AGG | - | chr4.4:65456082-65456101 | None:intergenic | 20.0% |
| !! | CTAAAATAAATATACACTCA+GGG | - | chr4.4:65456081-65456100 | None:intergenic | 20.0% |
| !! | CTTGATAAAAGTTTATAAAG+AGG | + | chr4.4:65456251-65456270 | MS.gene54883:intron | 20.0% |
| !! | GGTTACAAAACAAATTATTA+AGG | + | chr4.4:65455051-65455070 | MS.gene54883:CDS | 20.0% |
| !! | TAAAATAAATATACACTCAG+GGG | - | chr4.4:65456080-65456099 | None:intergenic | 20.0% |
| !! | TAACAATTTACAAGTATGTT+TGG | - | chr4.4:65458435-65458454 | None:intergenic | 20.0% |
| !! | TACTATGTAAATAAGCATTT+CGG | + | chr4.4:65457342-65457361 | MS.gene54883:intron | 20.0% |
| !! | TTATAAACTGGTAATAGAAA+TGG | + | chr4.4:65455967-65455986 | MS.gene54883:intron | 20.0% |
| !! | TTCAACAAGAGAAAATAAAA+AGG | - | chr4.4:65455713-65455732 | None:intergenic | 20.0% |
| !!! | AAATAATTTGAACTTGTTTG+TGG | + | chr4.4:65455268-65455287 | MS.gene54883:intron | 20.0% |
| !!! | AATAATTTGAACTTGTTTGT+GGG | + | chr4.4:65455269-65455288 | MS.gene54883:intron | 20.0% |
| !!! | AATTTAGTTTTTGAAACTGT+TGG | + | chr4.4:65455405-65455424 | MS.gene54883:intron | 20.0% |
| !!! | ATTCCTTTTTATCTTATTGA+AGG | + | chr4.4:65457902-65457921 | MS.gene54883:intron | 20.0% |
| !!! | ATTGGTCTTTATTAATGTAA+GGG | - | chr4.4:65457424-65457443 | None:intergenic | 20.0% |
| !!! | CAGAGATTTTTATGTAATTT+TGG | + | chr4.4:65456167-65456186 | MS.gene54883:intron | 20.0% |
| !!! | GAGTAAATTTTTCATTTTAG+TGG | + | chr4.4:65456006-65456025 | MS.gene54883:intron | 20.0% |
| !!! | TAAAGAAATATTTTGATCGA+GGG | - | chr4.4:65457456-65457475 | None:intergenic | 20.0% |
| !!! | TTCCTTTTTATCTTATTGAA+GGG | + | chr4.4:65457903-65457922 | MS.gene54883:intron | 20.0% |
| ! | AAAGAAATCCAATTGATCAA+TGG | - | chr4.4:65455902-65455921 | None:intergenic | 25.0% |
| ! | AAATTGCTGAAGAAAATTTG+AGG | - | chr4.4:65457369-65457388 | None:intergenic | 25.0% |
| ! | AACAAAAGAAAATTTCCTCA+CGG | - | chr4.4:65455582-65455601 | None:intergenic | 25.0% |
| ! | ACAATTTAGAGAATAGATGT+AGG | - | chr4.4:65455935-65455954 | None:intergenic | 25.0% |
| ! | ACTAAATAAAAGTGAGAATG+AGG | - | chr4.4:65458350-65458369 | None:intergenic | 25.0% |
| ! | ACTAAATTGAAATACCAAAC+AGG | - | chr4.4:65455458-65455477 | None:intergenic | 25.0% |
| ! | ACTATCAAAAGAGATATTTG+AGG | + | chr4.4:65456117-65456136 | MS.gene54883:intron | 25.0% |
| ! | AGAAAAACTTGAATCAAACA+TGG | - | chr4.4:65458189-65458208 | None:intergenic | 25.0% |
| ! | AGATATAGAATCATGTTACA+AGG | - | chr4.4:65458480-65458499 | None:intergenic | 25.0% |
| ! | AGCATAAATTTGAAGATACA+TGG | + | chr4.4:65455803-65455822 | MS.gene54883:CDS | 25.0% |
| ! | AGTATCTGATATTCTCTTAT+AGG | + | chr4.4:65455475-65455494 | MS.gene54883:intron | 25.0% |
| ! | ATAAATGGAAAGTAATTACC+TGG | - | chr4.4:65454710-65454729 | None:intergenic | 25.0% |
| ! | ATTCATAATTATGACCTGTA+TGG | + | chr4.4:65455737-65455756 | MS.gene54883:intron | 25.0% |
| ! | ATTGAACGGATATATGTTTA+AGG | + | chr4.4:65455293-65455312 | MS.gene54883:intron | 25.0% |
| ! | ATTTCCCTTGACTAAAAATA+TGG | - | chr4.4:65458031-65458050 | None:intergenic | 25.0% |
| ! | CAAATTTGATTATCTACCAT+TGG | + | chr4.4:65457558-65457577 | MS.gene54883:intron | 25.0% |
| ! | GAAAAACTTGAATCAAACAT+GGG | - | chr4.4:65458188-65458207 | None:intergenic | 25.0% |
| ! | GATAAAAGTTTATAAAGAGG+AGG | + | chr4.4:65456254-65456273 | MS.gene54883:intron | 25.0% |
| ! | TATAGTGAGTAAAATTCACA+GGG | + | chr4.4:65456889-65456908 | MS.gene54883:intron | 25.0% |
| ! | TGGTAGATAATCAAATTTGA+AGG | - | chr4.4:65457557-65457576 | None:intergenic | 25.0% |
| ! | TTATAGTGAGTAAAATTCAC+AGG | + | chr4.4:65456888-65456907 | MS.gene54883:intron | 25.0% |
| ! | TTCCCTTCAATAAGATAAAA+AGG | - | chr4.4:65457908-65457927 | None:intergenic | 25.0% |
| ! | TTGCTTATTGAAATTTGGAA+CGG | + | chr4.4:65455333-65455352 | MS.gene54883:intron | 25.0% |
| !! | GTTTTCATTAAATTGTTGCA+TGG | + | chr4.4:65456845-65456864 | MS.gene54883:intron | 25.0% |
| !! | TGATTTTCGTGTTTATAAAC+TGG | + | chr4.4:65455955-65455974 | MS.gene54883:intron | 25.0% |
| !! | TGTTGTTGCTTATTGAAATT+TGG | + | chr4.4:65455328-65455347 | MS.gene54883:intron | 25.0% |
| !! | TTTTCTTGACCTACAAAATA+AGG | - | chr4.4:65454917-65454936 | None:intergenic | 25.0% |
| !!! | AAAGTACTGAATATGCAAAA+GGG | + | chr4.4:65454960-65454979 | MS.gene54883:CDS | 25.0% |
| !!! | AAATTGTTTTACCGAGTTTT+GGG | + | chr4.4:65457762-65457781 | MS.gene54883:intron | 25.0% |
| !!! | ACTTGTTATTTGGTTTTTGA+TGG | + | chr4.4:65456618-65456637 | MS.gene54883:intron | 25.0% |
| !!! | ATGCTTGAAGTTTAAAGTTT+TGG | + | chr4.4:65455865-65455884 | MS.gene54883:intron | 25.0% |
| !!! | ATGTAATTTTGGTACATTCA+AGG | + | chr4.4:65456178-65456197 | MS.gene54883:intron | 25.0% |
| !!! | CTAAAGAAATATTTTGATCG+AGG | - | chr4.4:65457457-65457476 | None:intergenic | 25.0% |
| !!! | GATTGGTCTTTATTAATGTA+AGG | - | chr4.4:65457425-65457444 | None:intergenic | 25.0% |
| !!! | TAAATTGTTTTACCGAGTTT+TGG | + | chr4.4:65457761-65457780 | MS.gene54883:intron | 25.0% |
| !!! | TCTTTAACAGACTTGTTATT+TGG | + | chr4.4:65456608-65456627 | MS.gene54883:intron | 25.0% |
| !!! | TTGCTATTTCACAAATTTGA+GGG | - | chr4.4:65457395-65457414 | None:intergenic | 25.0% |
| !!! | TTTGCTATTTCACAAATTTG+AGG | - | chr4.4:65457396-65457415 | None:intergenic | 25.0% |
| AAATGAGTGAATTATATCCC+TGG | - | chr4.4:65458239-65458258 | None:intergenic | 30.0% | |
| AAATGTCTCACTCTTTATCA+TGG | - | chr4.4:65458279-65458298 | None:intergenic | 30.0% | |
| AATGAGTGAATTATATCCCT+GGG | - | chr4.4:65458238-65458257 | None:intergenic | 30.0% | |
| AATGTCTCACTCTTTATCAT+GGG | - | chr4.4:65458278-65458297 | None:intergenic | 30.0% | |
| ATTAAATTGTTGCATGGTCA+CGG | + | chr4.4:65456851-65456870 | MS.gene54883:intron | 30.0% | |
| ATTATGACCTGTATGGTTTA+TGG | + | chr4.4:65455744-65455763 | MS.gene54883:intron | 30.0% | |
| ATTGAGATGGTAATAGGAAA+AGG | + | chr4.4:65455841-65455860 | MS.gene54883:CDS | 30.0% | |
| CAAATTATTAAGGAAGGTCA+TGG | + | chr4.4:65455061-65455080 | MS.gene54883:CDS | 30.0% | |
| CTGTCATTGTGTTGAAATTT+GGG | - | chr4.4:65456322-65456341 | None:intergenic | 30.0% | |
| GAGTATAGAAGTCAATATGT+AGG | - | chr4.4:65457507-65457526 | None:intergenic | 30.0% | |
| GGATACAAGACTAATATTAC+AGG | - | chr4.4:65456402-65456421 | None:intergenic | 30.0% | |
| GGTAAGTGAAAAGTTATAGT+TGG | - | chr4.4:65458329-65458348 | None:intergenic | 30.0% | |
| GTATCACATGAGTGAATAAA+TGG | - | chr4.4:65454725-65454744 | None:intergenic | 30.0% | |
| GTTTCAGGAAAATAAACTAG+AGG | + | chr4.4:65456987-65457006 | MS.gene54883:CDS | 30.0% | |
| GTTTCATGCTAGTAGAAAAA+AGG | + | chr4.4:65455205-65455224 | MS.gene54883:intron | 30.0% | |
| TAAAATTTCTGCGATTTCCT+GGG | + | chr4.4:65458211-65458230 | MS.gene54883:intron | 30.0% | |
| TAAATTTGAAGATACATGGC+AGG | + | chr4.4:65455807-65455826 | MS.gene54883:CDS | 30.0% | |
| TATAGGAACTAATGTGTTCA+AGG | + | chr4.4:65455492-65455511 | MS.gene54883:intron | 30.0% | |
| TCAATATGTAGGTCTTTCAT+CGG | - | chr4.4:65457496-65457515 | None:intergenic | 30.0% | |
| TCATAAACTAAATCTGCCAT+TGG | - | chr4.4:65456787-65456806 | None:intergenic | 30.0% | |
| TCGAATTTCATGTATGATTG+AGG | + | chr4.4:65454888-65454907 | MS.gene54883:intron | 30.0% | |
| TGTCATTGTGTTGAAATTTG+GGG | - | chr4.4:65456321-65456340 | None:intergenic | 30.0% | |
| TTAAAATTTCTGCGATTTCC+TGG | + | chr4.4:65458210-65458229 | MS.gene54883:intron | 30.0% | |
| TTATCATGGGAATGAAAAAG+CGG | - | chr4.4:65458265-65458284 | None:intergenic | 30.0% | |
| TTTCAACAAATGACTTCTGT+TGG | - | chr4.4:65458517-65458536 | None:intergenic | 30.0% | |
| TTTCCTATTACCATCTCAAT+TGG | - | chr4.4:65455841-65455860 | None:intergenic | 30.0% | |
| ! | ACAAAAGCATGTTGAATACT+TGG | - | chr4.4:65455098-65455117 | None:intergenic | 30.0% |
| ! | ATTTTTACCAAAGTGAGCTT+TGG | + | chr4.4:65458151-65458170 | MS.gene54883:intron | 30.0% |
| ! | TCAACTTCAGAATCAACTTT+TGG | - | chr4.4:65455016-65455035 | None:intergenic | 30.0% |
| ! | TTTGAATGACCCAAATGTTT+TGG | + | chr4.4:65455552-65455571 | MS.gene54883:intron | 30.0% |
| !! | AAGTACTGAATATGCAAAAG+GGG | + | chr4.4:65454961-65454980 | MS.gene54883:CDS | 30.0% |
| !! | CTTTTGTTTAGACTGAATGT+GGG | + | chr4.4:65455594-65455613 | MS.gene54883:intron | 30.0% |
| !! | GAAAGTACTGAATATGCAAA+AGG | + | chr4.4:65454959-65454978 | MS.gene54883:CDS | 30.0% |
| !! | GCAATTTGAAGGCTTTATTT+AGG | + | chr4.4:65458563-65458582 | MS.gene54883:CDS | 30.0% |
| !! | GTTTGCTAAGTTGATTATCT+TGG | + | chr4.4:65457120-65457139 | MS.gene54883:intron | 30.0% |
| !! | TCTTTTGTTTAGACTGAATG+TGG | + | chr4.4:65455593-65455612 | MS.gene54883:intron | 30.0% |
| !!! | CTTGCCATATTTTTAGTCAA+GGG | + | chr4.4:65458024-65458043 | MS.gene54883:intron | 30.0% |
| !!! | TAATTACCTGGTTTTGATTG+TGG | - | chr4.4:65454698-65454717 | None:intergenic | 30.0% |
| !!! | TCTTGCCATATTTTTAGTCA+AGG | + | chr4.4:65458023-65458042 | MS.gene54883:intron | 30.0% |
| !!! | TTGAGGAAACCTTATTTTGT+AGG | + | chr4.4:65454905-65454924 | MS.gene54883:intron | 30.0% |
| AAACTTGCAGGTAATAAGTG+AGG | + | chr4.4:65458534-65458553 | MS.gene54883:intron | 35.0% | |
| AAAGAGTGAGACATTTCCAT+GGG | + | chr4.4:65458283-65458302 | MS.gene54883:intron | 35.0% | |
| AAGCATGTTGAATACTTGGA+AGG | - | chr4.4:65455094-65455113 | None:intergenic | 35.0% | |
| ACAGAGAAGAAAGAAATGAC+TGG | + | chr4.4:65456652-65456671 | MS.gene54883:intron | 35.0% | |
| ACGTGAAGCAAAACTGTATT+AGG | + | chr4.4:65455625-65455644 | MS.gene54883:intron | 35.0% | |
| ACTTCATGTTCCAGTTGTTT+GGG | + | chr4.4:65457175-65457194 | MS.gene54883:intron | 35.0% | |
| ACTTGTTTGTGGGAATTGAA+CGG | + | chr4.4:65455279-65455298 | MS.gene54883:intron | 35.0% | |
| AGTTGAAGTTCTTCATGAGA+AGG | + | chr4.4:65455030-65455049 | MS.gene54883:CDS | 35.0% | |
| ATTCAAGGACTACAGTGTAT+TGG | + | chr4.4:65456193-65456212 | MS.gene54883:intron | 35.0% | |
| CACGGTAAACCAAAACATTT+GGG | - | chr4.4:65455564-65455583 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr4.4:65456298-65456317 | None:intergenic | 35.0% | |
| GAATTAGGATATGGAAAGGA+AGG | + | chr4.4:65456736-65456755 | MS.gene54883:CDS | 35.0% | |
| GCTGTCATTGTGTTGAAATT+TGG | - | chr4.4:65456323-65456342 | None:intergenic | 35.0% | |
| GGACTACTCAATAATTCTTC+AGG | - | chr4.4:65454992-65455011 | None:intergenic | 35.0% | |
| GTTTATGAAGTTGAGCTCAT+TGG | + | chr4.4:65456799-65456818 | MS.gene54883:CDS | 35.0% | |
| TAAACTAAATCTGCCATTGG+TGG | - | chr4.4:65456784-65456803 | None:intergenic | 35.0% | |
| TAAAGAGTGAGACATTTCCA+TGG | + | chr4.4:65458282-65458301 | MS.gene54883:intron | 35.0% | |
| TAACCATTCATACTGTTGCA+TGG | - | chr4.4:65457016-65457035 | None:intergenic | 35.0% | |
| TAGTGGCTTAATGTGTAAGA+CGG | + | chr4.4:65456023-65456042 | MS.gene54883:intron | 35.0% | |
| TATCTACCATTGGAGTTCAA+TGG | + | chr4.4:65457568-65457587 | MS.gene54883:intron | 35.0% | |
| TATGGCAAGATATGCTTAGT+AGG | - | chr4.4:65458013-65458032 | None:intergenic | 35.0% | |
| TCACGGTAAACCAAAACATT+TGG | - | chr4.4:65455565-65455584 | None:intergenic | 35.0% | |
| TCAGGAAAATAAACTAGAGG+AGG | + | chr4.4:65456990-65457009 | MS.gene54883:CDS | 35.0% | |
| TCTTGTGTCCATTGATCAAT+TGG | + | chr4.4:65455891-65455910 | MS.gene54883:intron | 35.0% | |
| TGAAAAGTTATAGTTGGCTG+AGG | - | chr4.4:65458323-65458342 | None:intergenic | 35.0% | |
| TGATTATCTTGGTTCATGTC+AGG | + | chr4.4:65457131-65457150 | MS.gene54883:intron | 35.0% | |
| TTACAATCCAAAGCTCACTT+TGG | - | chr4.4:65458161-65458180 | None:intergenic | 35.0% | |
| TTCAAGGACTACAGTGTATT+GGG | + | chr4.4:65456194-65456213 | MS.gene54883:intron | 35.0% | |
| TTTAGTCCATTGAACTCCAA+TGG | - | chr4.4:65457577-65457596 | None:intergenic | 35.0% | |
| ! | ACATCTTTGATCAGAAGTGT+TGG | + | chr4.4:65454843-65454862 | MS.gene54883:intron | 35.0% |
| ! | ACTTCAGAATCAACTTTTGG+AGG | - | chr4.4:65455013-65455032 | None:intergenic | 35.0% |
| ! | AGGTCTAGAATTGTTGAATG+TGG | + | chr4.4:65455225-65455244 | MS.gene54883:intron | 35.0% |
| ! | AGTCATTTGTTGAAACTTGC+AGG | + | chr4.4:65458522-65458541 | MS.gene54883:intron | 35.0% |
| ! | TCAAAGTCATGCTGTTTGAT+TGG | + | chr4.4:65457692-65457711 | MS.gene54883:intron | 35.0% |
| ! | TTCAACATGCTTTTGTACAG+TGG | + | chr4.4:65455102-65455121 | MS.gene54883:intron | 35.0% |
| ! | TTTTCCAAATGTTCCACCAA+TGG | + | chr4.4:65456768-65456787 | MS.gene54883:CDS | 35.0% |
| !! | AAGAAAGAAATGACTGGCTT+GGG | + | chr4.4:65456658-65456677 | MS.gene54883:CDS | 35.0% |
| !! | TTGAAGGCTTTATTTAGGAG+AGG | + | chr4.4:65458568-65458587 | MS.gene54883:CDS | 35.0% |
| !!! | AAATGTTTTGGTTTACCGTG+AGG | + | chr4.4:65455564-65455583 | MS.gene54883:intron | 35.0% |
| AAAGTTATAGTTGGCTGAGG+AGG | - | chr4.4:65458320-65458339 | None:intergenic | 40.0% | |
| AACCGCTATGAAGAAGCTAT+AGG | + | chr4.4:65457269-65457288 | MS.gene54883:CDS | 40.0% | |
| ACTACCACCATAAACCATAC+AGG | - | chr4.4:65455754-65455773 | None:intergenic | 40.0% | |
| AGAGCTCATAAGAAGAGTAG+AGG | - | chr4.4:65455679-65455698 | None:intergenic | 40.0% | |
| AGATCCATGCCATCTTAACA+CGG | + | chr4.4:65457226-65457245 | MS.gene54883:CDS | 40.0% | |
| ATCAAAGATGTGTCTGGTGT+CGG | - | chr4.4:65454834-65454853 | None:intergenic | 40.0% | |
| ATGACCTGTATGGTTTATGG+TGG | + | chr4.4:65455747-65455766 | MS.gene54883:intron | 40.0% | |
| ATTTGAGGACCAAACTCACT+AGG | + | chr4.4:65456132-65456151 | MS.gene54883:intron | 40.0% | |
| CGACCAATTGAGATGGTAAT+AGG | + | chr4.4:65455835-65455854 | MS.gene54883:CDS | 40.0% | |
| CTGGGAATTAGGATATGGAA+AGG | + | chr4.4:65456732-65456751 | MS.gene54883:CDS | 40.0% | |
| CTGTCTAAGAATGCTTTCAC+TGG | - | chr4.4:65457974-65457993 | None:intergenic | 40.0% | |
| CTTCTGATCAAAGATGTGTC+TGG | - | chr4.4:65454840-65454859 | None:intergenic | 40.0% | |
| GACGCATTGAAGGACAAAAA+GGG | + | chr4.4:65456347-65456366 | MS.gene54883:intron | 40.0% | |
| GACTTCATGTTCCAGTTGTT+TGG | + | chr4.4:65457174-65457193 | MS.gene54883:intron | 40.0% | |
| GGATGGAAATGTTCTGTTTC+AGG | + | chr4.4:65456972-65456991 | MS.gene54883:CDS | 40.0% | |
| GTCCTATAGCTTCTTCATAG+CGG | - | chr4.4:65457274-65457293 | None:intergenic | 40.0% | |
| GTGATATGACTGTAGAGGAA+CGG | + | chr4.4:65456923-65456942 | MS.gene54883:CDS | 40.0% | |
| TATGACATCTAGCGTTAGTG+TGG | + | chr4.4:65456548-65456567 | MS.gene54883:intron | 40.0% | |
| TATGGTGGTAGTCCATTACA+GGG | + | chr4.4:65455762-65455781 | MS.gene54883:intron | 40.0% | |
| TATGTCCTTGGAGCTTCTAA+GGG | - | chr4.4:65457637-65457656 | None:intergenic | 40.0% | |
| TCACTCAGCATTTATGTCCT+TGG | - | chr4.4:65457649-65457668 | None:intergenic | 40.0% | |
| TCTCAACCACAATCAAAACC+AGG | + | chr4.4:65454689-65454708 | MS.gene54883:CDS | 40.0% | |
| TGACGCATTGAAGGACAAAA+AGG | + | chr4.4:65456346-65456365 | MS.gene54883:intron | 40.0% | |
| TGAGGATGAGAGCAATTTGA+AGG | + | chr4.4:65458552-65458571 | MS.gene54883:CDS | 40.0% | |
| TTATGGTGGTAGTCCATTAC+AGG | + | chr4.4:65455761-65455780 | MS.gene54883:intron | 40.0% | |
| TTATGTCCTTGGAGCTTCTA+AGG | - | chr4.4:65457638-65457657 | None:intergenic | 40.0% | |
| TTTGTCCTTCAATGCGTCAA+GGG | - | chr4.4:65456345-65456364 | None:intergenic | 40.0% | |
| ! | AATGAGTTCTGGCAAATGAC+AGG | + | chr4.4:65456455-65456474 | MS.gene54883:intron | 40.0% |
| ! | ATGAGTTCTGGCAAATGACA+GGG | + | chr4.4:65456456-65456475 | MS.gene54883:intron | 40.0% |
| ! | ATTGAGTTCTGGCAAATGAC+AGG | + | chr4.4:65456427-65456446 | MS.gene54883:intron | 40.0% |
| ! | CCAGTTGTTTGGGAAGTATA+GGG | + | chr4.4:65457185-65457204 | MS.gene54883:intron | 40.0% |
| ! | GAAGAAAGAAATGACTGGCT+TGG | + | chr4.4:65456657-65456676 | MS.gene54883:CDS | 40.0% |
| ! | GTTTGGGAAGTATAGGGATA+TGG | + | chr4.4:65457191-65457210 | MS.gene54883:intron | 40.0% |
| ! | TCCAGTTGTTTGGGAAGTAT+AGG | + | chr4.4:65457184-65457203 | MS.gene54883:intron | 40.0% |
| ! | TGTCATTTGCCAGAACTCAA+TGG | - | chr4.4:65456428-65456447 | None:intergenic | 40.0% |
| ! | TGTCATTTGCCAGAACTCAT+TGG | - | chr4.4:65456456-65456475 | None:intergenic | 40.0% |
| ! | TTGAGTTCTGGCAAATGACA+GGG | + | chr4.4:65456428-65456447 | MS.gene54883:intron | 40.0% |
| ! | TTTTGTCCTTCAATGCGTCA+AGG | - | chr4.4:65456346-65456365 | None:intergenic | 40.0% |
| !! | GGCTTTATTTAGGAGAGGTA+AGG | + | chr4.4:65458573-65458592 | MS.gene54883:CDS | 40.0% |
| !!! | AGGTCTTTCATCGGTTTTGA+TGG | - | chr4.4:65457487-65457506 | None:intergenic | 40.0% |
| AAGCATGAGCGCACAATATG+AGG | + | chr4.4:65457824-65457843 | MS.gene54883:intron | 45.0% | |
| AGAGTCTCATCTATCCGATG+TGG | - | chr4.4:65456233-65456252 | None:intergenic | 45.0% | |
| AGGCCATGCAACAGTATGAA+TGG | + | chr4.4:65457010-65457029 | MS.gene54883:CDS | 45.0% | |
| AGTCGTGTATCAGTCCTGTT+TGG | + | chr4.4:65455441-65455460 | MS.gene54883:intron | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | - | chr4.4:65456225-65456244 | None:intergenic | 45.0% | |
| ATGACTGTAGAGGAACGGAT+TGG | + | chr4.4:65456928-65456947 | MS.gene54883:CDS | 45.0% | |
| ATGTCAGGCCATAGCTTACA+TGG | + | chr4.4:65457146-65457165 | MS.gene54883:intron | 45.0% | |
| CCCTATACTTCCCAAACAAC+TGG | - | chr4.4:65457188-65457207 | None:intergenic | 45.0% | |
| CGTAGACTCAACCCAAAACT+CGG | - | chr4.4:65457776-65457795 | None:intergenic | 45.0% | |
| GAAAAACCCAAGTCCCACAT+CGG | + | chr4.4:65456216-65456235 | MS.gene54883:intron | 45.0% | |
| GAAGTATAGGGATATGGCTC+TGG | + | chr4.4:65457197-65457216 | MS.gene54883:intron | 45.0% | |
| GAGTCTCATCTATCCGATGT+GGG | - | chr4.4:65456232-65456251 | None:intergenic | 45.0% | |
| GATCGAGGGACGAAATTGAT+TGG | - | chr4.4:65457442-65457461 | None:intergenic | 45.0% | |
| GCATCTTGTCCTAGTGAGTT+TGG | - | chr4.4:65456144-65456163 | None:intergenic | 45.0% | |
| GCATTCTTAGACAGAAGCTG+TGG | + | chr4.4:65457980-65457999 | MS.gene54883:intron | 45.0% | |
| GGAGGTAATTTCTACTCCCA+TGG | - | chr4.4:65458302-65458321 | None:intergenic | 45.0% | |
| GTATCCATGCCATTGAGTTC+TGG | + | chr4.4:65456416-65456435 | MS.gene54883:intron | 45.0% | |
| GTCATCTCCCATGTAAGCTA+TGG | - | chr4.4:65457157-65457176 | None:intergenic | 45.0% | |
| GTGAGCTGGGAATTAGGATA+TGG | + | chr4.4:65456727-65456746 | MS.gene54883:CDS | 45.0% | |
| TCGCAGTGATATGACTGTAG+AGG | + | chr4.4:65456918-65456937 | MS.gene54883:CDS | 45.0% | |
| TCTGCCATTGGTGGAACATT+TGG | - | chr4.4:65456775-65456794 | None:intergenic | 45.0% | |
| TGTCAGGCCATAGCTTACAT+GGG | + | chr4.4:65457147-65457166 | MS.gene54883:intron | 45.0% | |
| TGTTGCGTCAGTGTTGTATC+TGG | - | chr4.4:65454753-65454772 | None:intergenic | 45.0% | |
| TTTGCCAGAACTCAATGGCA+TGG | - | chr4.4:65456423-65456442 | None:intergenic | 45.0% | |
| ! | TGACTGTAGAGGAACGGATT+GGG | + | chr4.4:65456929-65456948 | MS.gene54883:CDS | 45.0% |
| ! | TGCTCACACGTTTTGTCGTA+AGG | + | chr4.4:65457879-65457898 | MS.gene54883:intron | 45.0% |
| !! | AAATGACTGGCTTGGGCATT+GGG | + | chr4.4:65456665-65456684 | MS.gene54883:CDS | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr4.4:65456289-65456308 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr4.4:65456286-65456305 | MS.gene54883:intron | 45.0% |
| !! | GAAGTGTTGGTGTTACAGAG+AGG | + | chr4.4:65454856-65454875 | MS.gene54883:intron | 45.0% |
| CATCTATCCGATGTGGGACT+TGG | - | chr4.4:65456226-65456245 | None:intergenic | 50.0% | |
| GAATTATATCCCTGGGACCC+AGG | - | chr4.4:65458231-65458250 | None:intergenic | 50.0% | |
| GCAGATCGGAGAAAGATGGA+TGG | + | chr4.4:65456955-65456974 | MS.gene54883:CDS | 50.0% | |
| GCGGTTCAGCTTAATCAGAC+AGG | - | chr4.4:65457255-65457274 | None:intergenic | 50.0% | |
| GGAACGGCTTTCGTTGTATC+TGG | + | chr4.4:65455349-65455368 | MS.gene54883:intron | 50.0% | |
| GGAGCAACGACCAATTGAGA+TGG | + | chr4.4:65455828-65455847 | MS.gene54883:CDS | 50.0% | |
| GTAAGGCTAGAGCAGCACTT+GGG | + | chr4.4:65458590-65458609 | MS.gene54883:CDS | 50.0% | |
| TCCATGCCATCTTAACACGG+CGG | + | chr4.4:65457229-65457248 | MS.gene54883:CDS | 50.0% | |
| ! | TCCTTGGAGCTTCTAAGGGT+CGG | - | chr4.4:65457633-65457652 | None:intergenic | 50.0% |
| !! | AATGACTGGCTTGGGCATTG+GGG | + | chr4.4:65456666-65456685 | MS.gene54883:CDS | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr4.4:65456284-65456303 | None:intergenic | 50.0% |
| !! | GAAATGACTGGCTTGGGCAT+TGG | + | chr4.4:65456664-65456683 | MS.gene54883:CDS | 50.0% |
| !! | GACTGTAGAGGAACGGATTG+GGG | + | chr4.4:65456930-65456949 | MS.gene54883:CDS | 50.0% |
| ACCGACCCTTAGAAGCTCCA+AGG | + | chr4.4:65457629-65457648 | MS.gene54883:intron | 55.0% | |
| CTGCGTGTGAGCTGGGAATT+AGG | + | chr4.4:65456721-65456740 | MS.gene54883:CDS | 55.0% | |
| GACAGCCCTTGACGCATTGA+AGG | + | chr4.4:65456337-65456356 | MS.gene54883:intron | 55.0% | |
| GCACTCCTCACCTTACAAGC+CGG | + | chr4.4:65456276-65456295 | MS.gene54883:intron | 55.0% | |
| GGCAGCAGATCGGAGAAAGA+TGG | + | chr4.4:65456951-65456970 | MS.gene54883:CDS | 55.0% | |
| GGGTGGCAAGCATGAAAGCT+GGG | + | chr4.4:65456686-65456705 | MS.gene54883:CDS | 55.0% | |
| GGTAAGGCTAGAGCAGCACT+TGG | + | chr4.4:65458589-65458608 | MS.gene54883:CDS | 55.0% | |
| GGTGGCAAGCATGAAAGCTG+GGG | + | chr4.4:65456687-65456706 | MS.gene54883:CDS | 55.0% | |
| TCTCAGACCACGCCCTGTAA+TGG | - | chr4.4:65455777-65455796 | None:intergenic | 55.0% | |
| TGGTAGTCCATTACAGGGCG+TGG | + | chr4.4:65455767-65455786 | MS.gene54883:intron | 55.0% | |
| ! | GACAGGGTGCCAATGAGTTC+TGG | + | chr4.4:65456444-65456463 | MS.gene54883:intron | 55.0% |
| !! | AACGGATTGGGGCAGCAGAT+CGG | + | chr4.4:65456941-65456960 | MS.gene54883:CDS | 55.0% |
| AGCGTTGCTGCGTGTGAGCT+GGG | + | chr4.4:65456714-65456733 | MS.gene54883:CDS | 60.0% | |
| CAGGGCGTGGTCTGAGAACA+CGG | + | chr4.4:65455780-65455799 | MS.gene54883:CDS | 60.0% | |
| CTGCGATTTCCTGGGTCCCA+GGG | + | chr4.4:65458219-65458238 | MS.gene54883:intron | 60.0% | |
| GACAGGCCGCCGTGTTAAGA+TGG | - | chr4.4:65457238-65457257 | None:intergenic | 60.0% | |
| GCCGCCGTGTTAAGATGGCA+TGG | - | chr4.4:65457233-65457252 | None:intergenic | 60.0% | |
| GGGGTGGCAAGCATGAAAGC+TGG | + | chr4.4:65456685-65456704 | MS.gene54883:CDS | 60.0% | |
| TCTGCGATTTCCTGGGTCCC+AGG | + | chr4.4:65458218-65458237 | MS.gene54883:intron | 60.0% | |
| ! | GAGCGTTGCTGCGTGTGAGC+TGG | + | chr4.4:65456713-65456732 | MS.gene54883:CDS | 65.0% |
| !! | GACTGGCTTGGGCATTGGGG+TGG | + | chr4.4:65456669-65456688 | MS.gene54883:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 65454667 | 65458621 | 65454667 | ID=MS.gene54883 |
| chr4.4 | mRNA | 65454667 | 65458621 | 65454667 | ID=MS.gene54883.t1;Parent=MS.gene54883 |
| chr4.4 | exon | 65454667 | 65454710 | 65454667 | ID=MS.gene54883.t1.exon1;Parent=MS.gene54883.t1 |
| chr4.4 | CDS | 65454667 | 65454710 | 65454667 | ID=cds.MS.gene54883.t1;Parent=MS.gene54883.t1 |
| chr4.4 | exon | 65454927 | 65455115 | 65454927 | ID=MS.gene54883.t1.exon2;Parent=MS.gene54883.t1 |
| chr4.4 | CDS | 65454927 | 65455115 | 65454927 | ID=cds.MS.gene54883.t1;Parent=MS.gene54883.t1 |
| chr4.4 | exon | 65455773 | 65455862 | 65455773 | ID=MS.gene54883.t1.exon3;Parent=MS.gene54883.t1 |
| chr4.4 | CDS | 65455773 | 65455862 | 65455773 | ID=cds.MS.gene54883.t1;Parent=MS.gene54883.t1 |
| chr4.4 | exon | 65456656 | 65456840 | 65456656 | ID=MS.gene54883.t1.exon4;Parent=MS.gene54883.t1 |
| chr4.4 | CDS | 65456656 | 65456840 | 65456656 | ID=cds.MS.gene54883.t1;Parent=MS.gene54883.t1 |
| chr4.4 | exon | 65456910 | 65457044 | 65456910 | ID=MS.gene54883.t1.exon5;Parent=MS.gene54883.t1 |
| chr4.4 | CDS | 65456910 | 65457044 | 65456910 | ID=cds.MS.gene54883.t1;Parent=MS.gene54883.t1 |
| chr4.4 | exon | 65457206 | 65457304 | 65457206 | ID=MS.gene54883.t1.exon6;Parent=MS.gene54883.t1 |
| chr4.4 | CDS | 65457206 | 65457304 | 65457206 | ID=cds.MS.gene54883.t1;Parent=MS.gene54883.t1 |
| chr4.4 | exon | 65458544 | 65458621 | 65458544 | ID=MS.gene54883.t1.exon7;Parent=MS.gene54883.t1 |
| chr4.4 | CDS | 65458544 | 65458621 | 65458544 | ID=cds.MS.gene54883.t1;Parent=MS.gene54883.t1 |
| Gene Sequence |
| Protein sequence |
