Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56671.t1 | XP_003616589.2 | 96 | 328 | 13 | 0 | 1 | 328 | 1 | 328 | 1.30E-183 | 652.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56671.t1 | Q9LY62 | 63.6 | 327 | 111 | 4 | 3 | 328 | 11 | 330 | 8.3e-118 | 425.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56671.t1 | G7KGW5 | 96.0 | 328 | 13 | 0 | 1 | 328 | 1 | 328 | 9.6e-184 | 652.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene56671 | -0.818692 | 1.72E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene56671 | -0.821384 | 4.15E-53 | -1.69E-46 |
| MS.gene049281 | MS.gene56671 | 0.807189 | 5.71E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene56671 | -0.840797 | 7.00E-58 | -1.69E-46 |
| MS.gene049313 | MS.gene56671 | 0.849184 | 3.81E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene56671 | -0.855735 | 5.17E-62 | -1.69E-46 |
| MS.gene049627 | MS.gene56671 | -0.833121 | 6.40E-56 | -1.69E-46 |
| MS.gene05010 | MS.gene56671 | -0.800841 | 1.19E-48 | -1.69E-46 |
| MS.gene050163 | MS.gene56671 | -0.856832 | 2.46E-62 | -1.69E-46 |
| MS.gene050165 | MS.gene56671 | -0.841696 | 4.06E-58 | -1.69E-46 |
| MS.gene050333 | MS.gene56671 | -0.802579 | 5.25E-49 | -1.69E-46 |
| MS.gene050353 | MS.gene56671 | 0.803141 | 4.02E-49 | -1.69E-46 |
| MS.gene050363 | MS.gene56671 | 0.814769 | 1.30E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene56671 | -0.85796 | 1.14E-62 | -1.69E-46 |
| MS.gene050518 | MS.gene56671 | -0.821943 | 3.09E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene56671 | -0.83823 | 3.25E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene56671 | -0.836117 | 1.13E-56 | -1.69E-46 |
| MS.gene050883 | MS.gene56671 | 0.820075 | 8.31E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene56671 | -0.833169 | 6.22E-56 | -1.69E-46 |
| MS.gene05100 | MS.gene56671 | -0.853218 | 2.76E-61 | -1.69E-46 |
| MS.gene051551 | MS.gene56671 | -0.811754 | 5.98E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene56671 | -0.819409 | 1.18E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene56671 | -0.811933 | 5.46E-51 | -1.69E-46 |
| MS.gene052937 | MS.gene56671 | 0.822738 | 2.02E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene56671 | -0.824847 | 6.47E-54 | -1.69E-46 |
| MS.gene053286 | MS.gene56671 | -0.827966 | 1.17E-54 | -1.69E-46 |
| MS.gene053549 | MS.gene56671 | 0.825165 | 5.44E-54 | -1.69E-46 |
| MS.gene053561 | MS.gene56671 | 0.807696 | 4.46E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene56671 | -0.807793 | 4.25E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene56671 | -0.838224 | 3.26E-57 | -1.69E-46 |
| MS.gene054708 | MS.gene56671 | 0.809009 | 2.34E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene56671 | -0.805216 | 1.49E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene56671 | -0.83453 | 2.84E-56 | -1.69E-46 |
| MS.gene054959 | MS.gene56671 | 0.80173 | 7.85E-49 | -1.69E-46 |
| MS.gene055154 | MS.gene56671 | 0.801614 | 8.29E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene56671 | -0.859137 | 5.09E-63 | -1.69E-46 |
| MS.gene055502 | MS.gene56671 | -0.82333 | 1.47E-53 | -1.69E-46 |
| MS.gene056083 | MS.gene56671 | -0.816711 | 4.80E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene56671 | -0.832423 | 9.53E-56 | -1.69E-46 |
| MS.gene056550 | MS.gene56671 | 0.840464 | 8.56E-58 | -1.69E-46 |
| MS.gene056657 | MS.gene56671 | -0.840848 | 6.79E-58 | -1.69E-46 |
| MS.gene058419 | MS.gene56671 | -0.838558 | 2.68E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene56671 | -0.819159 | 1.34E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene56671 | -0.819093 | 1.39E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene56671 | -0.867389 | 1.42E-65 | -1.69E-46 |
| MS.gene059677 | MS.gene56671 | -0.849456 | 3.20E-60 | -1.69E-46 |
| MS.gene059718 | MS.gene56671 | -0.844328 | 8.09E-59 | -1.69E-46 |
| MS.gene060337 | MS.gene56671 | 0.817137 | 3.85E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene56671 | -0.80005 | 1.73E-48 | -1.69E-46 |
| MS.gene060703 | MS.gene56671 | -0.817794 | 2.74E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene56671 | -0.836956 | 6.91E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene56671 | -0.824341 | 8.51E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56671 | MS.gene014858 | PPI |
| MS.gene56671 | MS.gene58030 | PPI |
| MS.gene56671 | MS.gene072869 | PPI |
| MS.gene56671 | MS.gene32658 | PPI |
| MS.gene56671 | MS.gene036711 | PPI |
| MS.gene56671 | MS.gene80232 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56671.t1 | MTR_5g082110 | 96.037 | 328 | 13 | 0 | 1 | 328 | 1 | 328 | 0.0 | 654 |
| MS.gene56671.t1 | MTR_5g082110 | 87.744 | 359 | 13 | 1 | 1 | 328 | 1 | 359 | 0.0 | 639 |
| MS.gene56671.t1 | MTR_1g090920 | 33.193 | 238 | 131 | 6 | 85 | 314 | 538 | 755 | 1.93e-27 | 115 |
| MS.gene56671.t1 | MTR_1g009180 | 30.651 | 261 | 152 | 9 | 81 | 326 | 28 | 274 | 3.23e-25 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56671.t1 | AT3G55830 | 65.138 | 327 | 106 | 4 | 3 | 328 | 11 | 330 | 1.22e-155 | 443 |
| MS.gene56671.t1 | AT5G04500 | 30.000 | 240 | 136 | 6 | 85 | 314 | 532 | 749 | 2.55e-27 | 115 |
| MS.gene56671.t1 | AT1G80290 | 29.562 | 274 | 161 | 9 | 73 | 326 | 49 | 310 | 1.31e-19 | 89.7 |
| MS.gene56671.t1 | AT1G80290 | 29.562 | 274 | 161 | 9 | 73 | 326 | 57 | 318 | 1.54e-19 | 89.7 |
Find 95 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATAGATTTAAAGAAATTA+AGG | 0.224224 | 5.1:+64313585 | MS.gene56671:CDS |
| ATTTAAAGAAATTAAGGATT+TGG | 0.259132 | 5.1:+64313591 | MS.gene56671:CDS |
| CTGGTTCAAGTTTCTTATTA+TGG | 0.259686 | 5.1:+64311979 | MS.gene56671:CDS |
| CTGGATCAGCTCATGACTTC+TGG | 0.302964 | 5.1:-64317106 | None:intergenic |
| AACACTTCTTTCAGTGGAAT+TGG | 0.312452 | 5.1:+64317171 | MS.gene56671:CDS |
| GAACCTTGAATCAGTGAAAC+TGG | 0.317353 | 5.1:-64312030 | None:intergenic |
| TGTCATATTTCCCTGCTCTT+TGG | 0.318212 | 5.1:+64313645 | MS.gene56671:CDS |
| AGCAAAGGCGAGTACATTCT+TGG | 0.321864 | 5.1:+64317291 | MS.gene56671:CDS |
| ATCAACTGGAATTAGTAGTT+TGG | 0.324045 | 5.1:+64315751 | MS.gene56671:CDS |
| CTTGATCTTGGCTGATTTAA+CGG | 0.328719 | 5.1:-64311907 | None:intergenic |
| ATATCGTCCGTCTCTAGATT+TGG | 0.345844 | 5.1:-64313521 | None:intergenic |
| AACCTATTTACTTCTGTGTA+TGG | 0.359210 | 5.1:+64315806 | MS.gene56671:CDS |
| ATATATGAGATTGGATCAAC+TGG | 0.362340 | 5.1:+64315737 | MS.gene56671:CDS |
| AATTACCTTTAACCCATAAC+GGG | 0.378032 | 5.1:-64314762 | None:intergenic |
| CATATTTCCCTGCTCTTTGG+TGG | 0.386945 | 5.1:+64313648 | MS.gene56671:CDS |
| GGCAACCACCACGTGATGAT+TGG | 0.396155 | 5.1:+64317196 | MS.gene56671:CDS |
| TCAACTGGAATTAGTAGTTT+GGG | 0.396190 | 5.1:+64315752 | MS.gene56671:CDS |
| TGGAATTCGCATTTGATGTT+TGG | 0.400527 | 5.1:+64313668 | MS.gene56671:CDS |
| GAGAATTTGTAACTAAGAAC+AGG | 0.400975 | 5.1:+64314568 | MS.gene56671:CDS |
| GCCCATACACAGAAGTAAAT+AGG | 0.401306 | 5.1:-64315808 | None:intergenic |
| AGACTTTCTGATGGAGGATT+GGG | 0.401771 | 5.1:-64313469 | None:intergenic |
| TTTCTTGTCGCAAATGCAAC+TGG | 0.403236 | 5.1:+64314733 | MS.gene56671:CDS |
| GAAGTGTTAAAATAAGTATC+AGG | 0.409148 | 5.1:-64317156 | None:intergenic |
| TGGTGGTCTGTGTGGTGGAC+GGG | 0.410126 | 5.1:+64314459 | MS.gene56671:CDS |
| AAGACTTTCTGATGGAGGAT+TGG | 0.418259 | 5.1:-64313470 | None:intergenic |
| TTGAAAAGCCTTTGTCTACA+AGG | 0.418959 | 5.1:-64317372 | None:intergenic |
| GTCGGATTGAACAGAGGTTT+CGG | 0.421732 | 5.1:+64311868 | MS.gene56671:CDS |
| AAATTACCTTTAACCCATAA+CGG | 0.425637 | 5.1:-64314763 | None:intergenic |
| AAATAACAGAAGCTTGATCT+TGG | 0.452251 | 5.1:-64311919 | None:intergenic |
| TGTCCATTGGTTAGATTCGT+TGG | 0.458659 | 5.1:+64313729 | MS.gene56671:CDS |
| ACAGGTAAAATATATGAGAT+TGG | 0.461138 | 5.1:+64315728 | MS.gene56671:intron |
| TGCGAATTCCACCAAAGAGC+AGG | 0.461554 | 5.1:-64313656 | None:intergenic |
| GACAACAACAAATTTAGATA+TGG | 0.462661 | 5.1:+64314432 | MS.gene56671:CDS |
| ATGGTGGTCTGTGTGGTGGA+CGG | 0.464395 | 5.1:+64314458 | MS.gene56671:CDS |
| TTTCACTGACGTATATACTA+AGG | 0.468030 | 5.1:-64315837 | None:intergenic |
| TTCCCAGTTTCACTGATTCA+AGG | 0.472796 | 5.1:+64312027 | MS.gene56671:CDS |
| ACAAATTCTCTAATTGATGA+TGG | 0.477812 | 5.1:-64314555 | None:intergenic |
| TTTGTGAAAGAATGCTGCCT+TGG | 0.491658 | 5.1:-64314502 | None:intergenic |
| GTGGATAACGGTTCTAAAGC+TGG | 0.494586 | 5.1:+64317246 | MS.gene56671:CDS |
| CTTCTTTCAGTGGAATTGGT+TGG | 0.497748 | 5.1:+64317175 | MS.gene56671:CDS |
| ACCTATTTACTTCTGTGTAT+GGG | 0.504941 | 5.1:+64315807 | MS.gene56671:CDS |
| ACAAATCCCACCATTGCATC+CGG | 0.508793 | 5.1:-64313700 | None:intergenic |
| CAGAAGTCATGAGCTGATCC+AGG | 0.509484 | 5.1:+64317107 | MS.gene56671:CDS |
| TCAGTGAAACTGGGAATTTG+AGG | 0.510055 | 5.1:-64312020 | None:intergenic |
| TTAAAATTCCTTGTAGACAA+AGG | 0.511085 | 5.1:+64317364 | MS.gene56671:CDS |
| TGGATCAAATTAAATTCTGA+TGG | 0.521830 | 5.1:+64317216 | MS.gene56671:CDS |
| GATTTGTACCTCGTGTCCAT+TGG | 0.522707 | 5.1:+64313716 | MS.gene56671:CDS |
| TGATGTTTGGCAAAGTGCAC+CGG | 0.530100 | 5.1:+64313681 | MS.gene56671:CDS |
| GGAGCTGTTGGTTGAACCGT+CGG | 0.530590 | 5.1:+64311850 | MS.gene56671:CDS |
| CAGTGAAACTGGGAATTTGA+GGG | 0.535082 | 5.1:-64312019 | None:intergenic |
| CAAATTAAATTCTGATGGCA+TGG | 0.538144 | 5.1:+64317221 | MS.gene56671:CDS |
| AACAACAAATTTAGATATGG+TGG | 0.541211 | 5.1:+64314435 | MS.gene56671:CDS |
| AAGTGCACCGGATGCAATGG+TGG | 0.544682 | 5.1:+64313693 | MS.gene56671:CDS |
| TTAGCTGCAAATTGTATACC+TGG | 0.554298 | 5.1:-64317125 | None:intergenic |
| GATGGCATGGTGGTGGATAA+CGG | 0.562059 | 5.1:+64317234 | MS.gene56671:CDS |
| TTTAGAAGACTTTCTGATGG+AGG | 0.564085 | 5.1:-64313475 | None:intergenic |
| ATGGTGGATGGTGGTCTGTG+TGG | 0.564923 | 5.1:+64314451 | MS.gene56671:CDS |
| GTGGATGGTGGTCTGTGTGG+TGG | 0.565684 | 5.1:+64314454 | MS.gene56671:CDS |
| ACGGACGATATGTGAAGTTG+AGG | 0.586320 | 5.1:+64313533 | MS.gene56671:CDS |
| TATTAGCGGCGGTGATGAGA+GGG | 0.587978 | 5.1:+64311829 | None:intergenic |
| CGGTGATGAGAGGGAGCTGT+TGG | 0.589133 | 5.1:+64311838 | None:intergenic |
| AAATTCTGATGGCATGGTGG+TGG | 0.591986 | 5.1:+64317227 | MS.gene56671:CDS |
| AACGGTTCTAAAGCTGGACG+TGG | 0.596111 | 5.1:+64317252 | MS.gene56671:CDS |
| TTATTAGCGGCGGTGATGAG+AGG | 0.597155 | 5.1:+64311828 | None:intergenic |
| TTCACTGACGTATATACTAA+GGG | 0.597837 | 5.1:-64315836 | None:intergenic |
| TGTATTATACGCAACAGCAA+AGG | 0.599977 | 5.1:+64317276 | MS.gene56671:CDS |
| TTCGCGAGAAACATCTGTCA+TGG | 0.601668 | 5.1:+64317315 | MS.gene56671:CDS |
| ACAAATTTAGATATGGTGGA+TGG | 0.602492 | 5.1:+64314439 | MS.gene56671:CDS |
| GCGAATTCCACCAAAGAGCA+GGG | 0.602554 | 5.1:-64313655 | None:intergenic |
| ATACCAACGAATCTAACCAA+TGG | 0.611009 | 5.1:-64313732 | None:intergenic |
| ATATAGCATGGTGCTCTCCA+AGG | 0.616926 | 5.1:+64314485 | MS.gene56671:CDS |
| GTTTGGGAGGTCATAGTGAA+CGG | 0.624381 | 5.1:+64315768 | MS.gene56671:CDS |
| TATTTACTTCTGTGTATGGG+CGG | 0.627886 | 5.1:+64315810 | MS.gene56671:CDS |
| TTGAGTCAGTACATATTGTG+TGG | 0.629828 | 5.1:+64313440 | MS.gene56671:CDS |
| AACCTTGAATCAGTGAAACT+GGG | 0.631242 | 5.1:-64312029 | None:intergenic |
| ACTGGAATTAGTAGTTTGGG+AGG | 0.632754 | 5.1:+64315755 | MS.gene56671:CDS |
| GCAAAGTGCACCGGATGCAA+TGG | 0.638093 | 5.1:+64313690 | MS.gene56671:CDS |
| ATTACCTTTAACCCATAACG+GGG | 0.639745 | 5.1:-64314761 | None:intergenic |
| AGTGCACCGGATGCAATGGT+GGG | 0.640002 | 5.1:+64313694 | MS.gene56671:CDS |
| AATTTAGATATGGTGGATGG+TGG | 0.653603 | 5.1:+64314442 | MS.gene56671:CDS |
| GATCTTGGCTGATTTAACGG+TGG | 0.667058 | 5.1:-64311904 | None:intergenic |
| TGAACCGTCGGATTGAACAG+AGG | 0.670462 | 5.1:+64311862 | MS.gene56671:CDS |
| AATTTGATCCAATCATCACG+TGG | 0.674803 | 5.1:-64317204 | None:intergenic |
| ATATGTACTGACTCAAGTCG+AGG | 0.675049 | 5.1:-64313433 | None:intergenic |
| AGTGAAACTGGGAATTTGAG+GGG | 0.676257 | 5.1:-64312018 | None:intergenic |
| TTGATCCAATCATCACGTGG+TGG | 0.677765 | 5.1:-64317201 | None:intergenic |
| GTAAAGTCCAAATCTAGAGA+CGG | 0.683801 | 5.1:+64313514 | MS.gene56671:CDS |
| GAAACCTCTGTTCAATCCGA+CGG | 0.684402 | 5.1:-64311866 | None:intergenic |
| ATTAAATTCTGATGGCATGG+TGG | 0.692926 | 5.1:+64317224 | MS.gene56671:CDS |
| GAATCTAACCAATGGACACG+AGG | 0.709906 | 5.1:-64313724 | None:intergenic |
| ATTCTATTGTAATGAACACG+TGG | 0.719028 | 5.1:+64313362 | MS.gene56671:CDS |
| GTTGAGGTTTGATATCAACA+CGG | 0.722201 | 5.1:+64313549 | MS.gene56671:CDS |
| TTACCTTTAACCCATAACGG+GGG | 0.745725 | 5.1:-64314760 | None:intergenic |
| GTGGACGGGTACATATAGCA+TGG | 0.778264 | 5.1:+64314473 | MS.gene56671:CDS |
| TAGATTTGGACTTTACAACG+TGG | 0.788272 | 5.1:-64313507 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGTTTATCTTATAATTA+AGG | + | chr5.1:64315286-64315305 | MS.gene56671:intron | 10.0% |
| !! | TAATAGATTTAAAGAAATTA+AGG | + | chr5.1:64313585-64313604 | MS.gene56671:CDS | 10.0% |
| !! | TATTAAAAAAAAAACTTGTA+AGG | + | chr5.1:64314371-64314390 | MS.gene56671:intron | 10.0% |
| !! | TTATGTTTAGTATTTAAATT+TGG | + | chr5.1:64312413-64312432 | MS.gene56671:intron | 10.0% |
| !!! | GAAAATACAAAATTTATTTT+TGG | + | chr5.1:64312142-64312161 | MS.gene56671:intron | 10.0% |
| !! | AAAAAAATTTACATTGAACT+TGG | - | chr5.1:64312974-64312993 | None:intergenic | 15.0% |
| !! | AAATAAATCAAAAATTAGCA+GGG | - | chr5.1:64314616-64314635 | None:intergenic | 15.0% |
| !! | ATAGGAAATATAAATAGAAA+GGG | + | chr5.1:64312305-64312324 | MS.gene56671:intron | 15.0% |
| !! | ATTTAAAGAAATTAAGGATT+TGG | + | chr5.1:64313591-64313610 | MS.gene56671:CDS | 15.0% |
| !! | GAAGTGAATTTATATATATT+TGG | + | chr5.1:64312931-64312950 | MS.gene56671:intron | 15.0% |
| !! | GTAAAAAAAAATTAGATGTT+TGG | - | chr5.1:64313083-64313102 | None:intergenic | 15.0% |
| !! | TAAATAAATCAAAAATTAGC+AGG | - | chr5.1:64314617-64314636 | None:intergenic | 15.0% |
| !! | TTATTGATCAAATAACAAAA+TGG | - | chr5.1:64314671-64314690 | None:intergenic | 15.0% |
| !!! | AATACAAAATTTATTTTTGG+TGG | + | chr5.1:64312145-64312164 | MS.gene56671:intron | 15.0% |
| !!! | ATACAAAATTTATTTTTGGT+GGG | + | chr5.1:64312146-64312165 | MS.gene56671:intron | 15.0% |
| !!! | TTAATTTGAAGAGTAAAATA+GGG | + | chr5.1:64312381-64312400 | MS.gene56671:intron | 15.0% |
| !!! | TTTAATTTGAAGAGTAAAAT+AGG | + | chr5.1:64312380-64312399 | MS.gene56671:intron | 15.0% |
| !! | AATAAATCAAAAATTAGCAG+GGG | - | chr5.1:64314615-64314634 | None:intergenic | 20.0% |
| !! | AATAATTCAAATGATTTACC+AGG | + | chr5.1:64314686-64314705 | MS.gene56671:intron | 20.0% |
| !! | ATTTGATTGTAGAATATTGA+AGG | + | chr5.1:64316172-64316191 | MS.gene56671:intron | 20.0% |
| !! | CAAAAAAAAATTAAAAGTCC+AGG | - | chr5.1:64312758-64312777 | None:intergenic | 20.0% |
| !! | CATAGGAAATATAAATAGAA+AGG | + | chr5.1:64312304-64312323 | MS.gene56671:intron | 20.0% |
| !! | CGTTCAATAATTAAAAGATA+CGG | - | chr5.1:64314796-64314815 | None:intergenic | 20.0% |
| !! | CTATAGTTAATGATGATTAA+TGG | + | chr5.1:64312075-64312094 | MS.gene56671:intron | 20.0% |
| !! | CTTAAAAGGTAAATACTATT+GGG | - | chr5.1:64313987-64314006 | None:intergenic | 20.0% |
| !! | GAATTTCTATATATGTGTTT+GGG | + | chr5.1:64312231-64312250 | MS.gene56671:intron | 20.0% |
| !! | GGTTTCAAAAATAAATTTCA+TGG | - | chr5.1:64315432-64315451 | None:intergenic | 20.0% |
| !! | TAACAATAAGAGATAAAAAG+TGG | - | chr5.1:64313019-64313038 | None:intergenic | 20.0% |
| !! | TAATTAAGGAAGTTAAAGTA+TGG | + | chr5.1:64315300-64315319 | MS.gene56671:intron | 20.0% |
| !! | TATATATGATGTTTACATTG+TGG | + | chr5.1:64315691-64315710 | MS.gene56671:intron | 20.0% |
| !! | TCTTAAAAGGTAAATACTAT+TGG | - | chr5.1:64313988-64314007 | None:intergenic | 20.0% |
| !! | TGATTATGTATGATTTGATT+TGG | + | chr5.1:64312894-64312913 | MS.gene56671:intron | 20.0% |
| !! | TTAAAAGGTAAATACTATTG+GGG | - | chr5.1:64313986-64314005 | None:intergenic | 20.0% |
| !!! | AAGGGATTTTGTATATAATA+AGG | + | chr5.1:64312323-64312342 | MS.gene56671:intron | 20.0% |
| !!! | ACATTTGTAAGATTGATTTA+TGG | + | chr5.1:64314925-64314944 | MS.gene56671:intron | 20.0% |
| !!! | ACTTTTGTAGTTTCTATTTT+AGG | + | chr5.1:64312100-64312119 | MS.gene56671:intron | 20.0% |
| !!! | ATATATTTTACCTGTAACAA+AGG | - | chr5.1:64315723-64315742 | None:intergenic | 20.0% |
| !!! | CGTATCTTTTAATTATTGAA+CGG | + | chr5.1:64314794-64314813 | MS.gene56671:intron | 20.0% |
| !!! | CTGGACTTTTAATTTTTTTT+TGG | + | chr5.1:64312756-64312775 | MS.gene56671:intron | 20.0% |
| !!! | CTTTTGTAGTTTCTATTTTA+GGG | + | chr5.1:64312101-64312120 | MS.gene56671:intron | 20.0% |
| !!! | GTATCTTTTAATTATTGAAC+GGG | + | chr5.1:64314795-64314814 | MS.gene56671:intron | 20.0% |
| !!! | GTCATTTTCTCAAATATTAT+TGG | + | chr5.1:64312611-64312630 | MS.gene56671:intron | 20.0% |
| !!! | TTCATGCTTAATTTTGAAAT+GGG | - | chr5.1:64314065-64314084 | None:intergenic | 20.0% |
| !!! | TTTCATGCTTAATTTTGAAA+TGG | - | chr5.1:64314066-64314085 | None:intergenic | 20.0% |
| !!! | TTTGGAATGAATATATAACA+AGG | + | chr5.1:64312431-64312450 | MS.gene56671:intron | 20.0% |
| !!! | TTTTGTTCAAATTTGTATAC+TGG | + | chr5.1:64312717-64312736 | MS.gene56671:intron | 20.0% |
| !!! | TTTTTTTGTTTGTTTTGCAT+AGG | + | chr5.1:64312287-64312306 | MS.gene56671:intron | 20.0% |
| ! | AAAGTTATAGCAATAGCAAA+AGG | + | chr5.1:64315127-64315146 | MS.gene56671:intron | 25.0% |
| ! | AAATAAGCATCTAATTCAGT+TGG | + | chr5.1:64316335-64316354 | MS.gene56671:intron | 25.0% |
| ! | AAATTACCTTTAACCCATAA+CGG | - | chr5.1:64314766-64314785 | None:intergenic | 25.0% |
| ! | AACAACAAATTTAGATATGG+TGG | + | chr5.1:64314435-64314454 | MS.gene56671:CDS | 25.0% |
| ! | AATGTGTAGTCAAAATATCA+AGG | - | chr5.1:64313804-64313823 | None:intergenic | 25.0% |
| ! | AATTGATGTATAACAGTTTC+AGG | - | chr5.1:64316897-64316916 | None:intergenic | 25.0% |
| ! | ACAAATTCTCTAATTGATGA+TGG | - | chr5.1:64314558-64314577 | None:intergenic | 25.0% |
| ! | ACAGGTAAAATATATGAGAT+TGG | + | chr5.1:64315728-64315747 | MS.gene56671:intron | 25.0% |
| ! | ACTAATCATGTATCATTCAT+TGG | - | chr5.1:64314958-64314977 | None:intergenic | 25.0% |
| ! | ATAAATCAAAAATTAGCAGG+GGG | - | chr5.1:64314614-64314633 | None:intergenic | 25.0% |
| ! | ATATCTATGAAGCATAGATA+CGG | - | chr5.1:64312666-64312685 | None:intergenic | 25.0% |
| ! | CAATGAAGAATATGAAAATG+TGG | - | chr5.1:64315007-64315026 | None:intergenic | 25.0% |
| ! | GACAACAACAAATTTAGATA+TGG | + | chr5.1:64314432-64314451 | MS.gene56671:CDS | 25.0% |
| ! | GGAATTTCTATATATGTGTT+TGG | + | chr5.1:64312230-64312249 | MS.gene56671:intron | 25.0% |
| ! | GTTGGAAAAATACAAAGTTT+CGG | + | chr5.1:64312198-64312217 | MS.gene56671:intron | 25.0% |
| ! | GTTTAAATTCATGATTGAGA+GGG | - | chr5.1:64313141-64313160 | None:intergenic | 25.0% |
| ! | TAAACAATAATTGACAACAG+TGG | - | chr5.1:64315933-64315952 | None:intergenic | 25.0% |
| ! | TACATGTTAATATCAATGTG+CGG | - | chr5.1:64316802-64316821 | None:intergenic | 25.0% |
| ! | TATTACAAGAAATCAACCTA+AGG | - | chr5.1:64316092-64316111 | None:intergenic | 25.0% |
| ! | TCAAGGATAATTGAAAATCA+TGG | - | chr5.1:64313787-64313806 | None:intergenic | 25.0% |
| ! | TCATCAAAAAAATTGTTTCC+AGG | - | chr5.1:64316955-64316974 | None:intergenic | 25.0% |
| ! | TCTCAATCATGAATTTAAAC+AGG | + | chr5.1:64313141-64313160 | MS.gene56671:intron | 25.0% |
| ! | TGAATGATACATGATTAGTA+TGG | + | chr5.1:64314959-64314978 | MS.gene56671:intron | 25.0% |
| ! | TGATCAAATAACAAAATGGT+TGG | - | chr5.1:64314667-64314686 | None:intergenic | 25.0% |
| ! | TGGATCAAATTAAATTCTGA+TGG | + | chr5.1:64317216-64317235 | MS.gene56671:CDS | 25.0% |
| ! | TGTAATTATATGTGTCATGT+TGG | - | chr5.1:64312582-64312601 | None:intergenic | 25.0% |
| ! | TGTGAATAACTAATTAAGCT+TGG | + | chr5.1:64313869-64313888 | MS.gene56671:intron | 25.0% |
| ! | TGTTTAAATTCATGATTGAG+AGG | - | chr5.1:64313142-64313161 | None:intergenic | 25.0% |
| ! | TTAAAATTCCTTGTAGACAA+AGG | + | chr5.1:64317364-64317383 | MS.gene56671:CDS | 25.0% |
| ! | TTGCAAAACTACATCTTAAA+AGG | - | chr5.1:64314001-64314020 | None:intergenic | 25.0% |
| !! | ATAAACAACAATTAGTTCTC+TGG | - | chr5.1:64313321-64313340 | None:intergenic | 25.0% |
| !! | CACATTTTCATATTCTTCAT+TGG | + | chr5.1:64315005-64315024 | MS.gene56671:intron | 25.0% |
| !! | GAAGTGTTAAAATAAGTATC+AGG | - | chr5.1:64317159-64317178 | None:intergenic | 25.0% |
| !! | TATCGTGATTTCATTTGTTT+TGG | + | chr5.1:64315390-64315409 | MS.gene56671:intron | 25.0% |
| !! | TGGATAATTTAGTGTGTTTT+TGG | + | chr5.1:64312839-64312858 | MS.gene56671:intron | 25.0% |
| !!! | ACAAAGTTTCGGTTTTTTTA+TGG | + | chr5.1:64312209-64312228 | MS.gene56671:intron | 25.0% |
| !!! | GTGCTATTTTTGTTGTTTTA+TGG | - | chr5.1:64314097-64314116 | None:intergenic | 25.0% |
| !!! | TATACACAATTCTTGCTTTT+TGG | + | chr5.1:64316049-64316068 | MS.gene56671:intron | 25.0% |
| !!! | TATTTTAACACTTCTTTCAG+TGG | + | chr5.1:64317165-64317184 | MS.gene56671:CDS | 25.0% |
| !!! | TATTTTAGAAGACTTTCTGA+TGG | - | chr5.1:64313481-64313500 | None:intergenic | 25.0% |
| !!! | TGGAAATGTTTTTTTGTTGT+TGG | + | chr5.1:64312180-64312199 | MS.gene56671:intron | 25.0% |
| !!! | TTGATTTGTATTACCATGAT+GGG | - | chr5.1:64315573-64315592 | None:intergenic | 25.0% |
| !!! | TTTGATTTGTATTACCATGA+TGG | - | chr5.1:64315574-64315593 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTTTATGGCAATA+AGG | - | chr5.1:64314089-64314108 | None:intergenic | 25.0% |
| AAATAACAGAAGCTTGATCT+TGG | - | chr5.1:64311922-64311941 | None:intergenic | 30.0% | |
| AACCTATTTACTTCTGTGTA+TGG | + | chr5.1:64315806-64315825 | MS.gene56671:CDS | 30.0% | |
| AAGAGATAAAAAGTGGATCT+TGG | - | chr5.1:64313012-64313031 | None:intergenic | 30.0% | |
| AATAAAGGAACAAGAAGTCA+AGG | - | chr5.1:64315179-64315198 | None:intergenic | 30.0% | |
| AATTACCTTTAACCCATAAC+GGG | - | chr5.1:64314765-64314784 | None:intergenic | 30.0% | |
| ACCTATTTACTTCTGTGTAT+GGG | + | chr5.1:64315807-64315826 | MS.gene56671:CDS | 30.0% | |
| AGAGATAAAAAGTGGATCTT+GGG | - | chr5.1:64313011-64313030 | None:intergenic | 30.0% | |
| AGATTATACAAAGCCTAACA+AGG | - | chr5.1:64315504-64315523 | None:intergenic | 30.0% | |
| AGTGATCATTTGATCAACTA+CGG | + | chr5.1:64312790-64312809 | MS.gene56671:intron | 30.0% | |
| ATATATGAGATTGGATCAAC+TGG | + | chr5.1:64315737-64315756 | MS.gene56671:CDS | 30.0% | |
| ATCAACTGGAATTAGTAGTT+TGG | + | chr5.1:64315751-64315770 | MS.gene56671:CDS | 30.0% | |
| ATTCTATTGTAATGAACACG+TGG | + | chr5.1:64313362-64313381 | MS.gene56671:CDS | 30.0% | |
| CAAATTAAATTCTGATGGCA+TGG | + | chr5.1:64317221-64317240 | MS.gene56671:CDS | 30.0% | |
| CAATCTTACAAATGTCAGAA+AGG | - | chr5.1:64314920-64314939 | None:intergenic | 30.0% | |
| CATAAAACCTAACATTAGCA+TGG | - | chr5.1:64315547-64315566 | None:intergenic | 30.0% | |
| CTTAGCTCATAAAGTATGAT+TGG | + | chr5.1:64316774-64316793 | MS.gene56671:intron | 30.0% | |
| GAGAATTTGTAACTAAGAAC+AGG | + | chr5.1:64314568-64314587 | MS.gene56671:CDS | 30.0% | |
| GCATACTATTGTGAAACATA+TGG | + | chr5.1:64314031-64314050 | MS.gene56671:intron | 30.0% | |
| GTAAATACTATTGGGGATTA+TGG | - | chr5.1:64313979-64313998 | None:intergenic | 30.0% | |
| GTTGTTTATTCTTTGTTCAC+AGG | + | chr5.1:64313332-64313351 | MS.gene56671:intron | 30.0% | |
| TACTAATTGCTTCAATGTAC+AGG | - | chr5.1:64315206-64315225 | None:intergenic | 30.0% | |
| TATGAAGCATATATACTCCT+CGG | + | chr5.1:64312515-64312534 | MS.gene56671:intron | 30.0% | |
| TATTCAATGTTCTTGCAGAA+TGG | + | chr5.1:64314408-64314427 | MS.gene56671:intron | 30.0% | |
| TCAACTGGAATTAGTAGTTT+GGG | + | chr5.1:64315752-64315771 | MS.gene56671:CDS | 30.0% | |
| TCAATTATGCAAGACAGATA+TGG | + | chr5.1:64316911-64316930 | MS.gene56671:intron | 30.0% | |
| TGAAGAGTAAAATAGGGAAA+TGG | + | chr5.1:64312387-64312406 | MS.gene56671:intron | 30.0% | |
| TGATATTTGTACATTCTGAC+TGG | - | chr5.1:64316278-64316297 | None:intergenic | 30.0% | |
| TGCAAGAACATTGAATAACT+TGG | - | chr5.1:64314405-64314424 | None:intergenic | 30.0% | |
| TTACATTGAACTTGGTTTCA+GGG | - | chr5.1:64312966-64312985 | None:intergenic | 30.0% | |
| TTAGTTCATTGTGAAACACA+AGG | - | chr5.1:64316451-64316470 | None:intergenic | 30.0% | |
| TTATTCTTTGTTCACAGGAA+AGG | + | chr5.1:64313337-64313356 | MS.gene56671:intron | 30.0% | |
| TTCACTGACGTATATACTAA+GGG | - | chr5.1:64315839-64315858 | None:intergenic | 30.0% | |
| TTTACATTGAACTTGGTTTC+AGG | - | chr5.1:64312967-64312986 | None:intergenic | 30.0% | |
| TTTCACTGACGTATATACTA+AGG | - | chr5.1:64315840-64315859 | None:intergenic | 30.0% | |
| ! | AATTGATGAAGTGTTAACAC+AGG | + | chr5.1:64316243-64316262 | MS.gene56671:intron | 30.0% |
| ! | ACAAATTTAGATATGGTGGA+TGG | + | chr5.1:64314439-64314458 | MS.gene56671:CDS | 30.0% |
| ! | CTGGTTCAAGTTTCTTATTA+TGG | + | chr5.1:64311979-64311998 | MS.gene56671:CDS | 30.0% |
| ! | GAATTTTCTGCAGTATTCTA+CGG | + | chr5.1:64317340-64317359 | MS.gene56671:CDS | 30.0% |
| ! | TATAGATTGTAACGAGCTTT+TGG | + | chr5.1:64312468-64312487 | MS.gene56671:intron | 30.0% |
| ! | TTTGGTGGGAAATTCTTTTA+TGG | + | chr5.1:64312160-64312179 | MS.gene56671:intron | 30.0% |
| !! | CTAAGGAATTTGCTAAATCA+GGG | - | chr5.1:64316075-64316094 | None:intergenic | 30.0% |
| !! | GTTTTATTGCCTTGATTTGA+AGG | + | chr5.1:64312345-64312364 | MS.gene56671:intron | 30.0% |
| !!! | TTTTATTTTCATGAGTGCTG+AGG | + | chr5.1:64313278-64313297 | MS.gene56671:intron | 30.0% |
| !!! | TTTTTTGATGATGAACTGCT+TGG | + | chr5.1:64316964-64316983 | MS.gene56671:intron | 30.0% |
| AAATCAAACATTGCTCTCGT+TGG | + | chr5.1:64315586-64315605 | MS.gene56671:intron | 35.0% | |
| AACACCATCTAATCCAAAGA+AGG | - | chr5.1:64315085-64315104 | None:intergenic | 35.0% | |
| AACACTTCTTTCAGTGGAAT+TGG | + | chr5.1:64317171-64317190 | MS.gene56671:CDS | 35.0% | |
| AACCTTGAATCAGTGAAACT+GGG | - | chr5.1:64312032-64312051 | None:intergenic | 35.0% | |
| AACTAATTAAGCTTGGAGCA+GGG | + | chr5.1:64313876-64313895 | MS.gene56671:intron | 35.0% | |
| AATGTCAGAAAGGAGAAAGA+CGG | - | chr5.1:64314910-64314929 | None:intergenic | 35.0% | |
| AATTTGATCCAATCATCACG+TGG | - | chr5.1:64317207-64317226 | None:intergenic | 35.0% | |
| ACACATGCATCTTCTTTGTA+TGG | - | chr5.1:64315638-64315657 | None:intergenic | 35.0% | |
| AGGTCCTCATATAACAATGA+GGG | - | chr5.1:64314160-64314179 | None:intergenic | 35.0% | |
| ATAAATGACTAACGTGAACG+TGG | - | chr5.1:64316009-64316028 | None:intergenic | 35.0% | |
| ATACCAACGAATCTAACCAA+TGG | - | chr5.1:64313735-64313754 | None:intergenic | 35.0% | |
| ATCTAGATGCATGTTTCGAA+CGG | + | chr5.1:64316623-64316642 | MS.gene56671:intron | 35.0% | |
| ATTAAATTCTGATGGCATGG+TGG | + | chr5.1:64317224-64317243 | MS.gene56671:CDS | 35.0% | |
| ATTACCTTTAACCCATAACG+GGG | - | chr5.1:64314764-64314783 | None:intergenic | 35.0% | |
| ATTTGATCAACTACGGAGTT+CGG | + | chr5.1:64312797-64312816 | MS.gene56671:intron | 35.0% | |
| CAATGTACAGGCTGTAATAA+AGG | - | chr5.1:64315194-64315213 | None:intergenic | 35.0% | |
| CACAACAAGGACAAAATAAC+AGG | - | chr5.1:64314180-64314199 | None:intergenic | 35.0% | |
| CACATGCATCTTCTTTGTAT+GGG | - | chr5.1:64315637-64315656 | None:intergenic | 35.0% | |
| CCTGATTTAGCAAATTCCTT+AGG | + | chr5.1:64316073-64316092 | MS.gene56671:intron | 35.0% | |
| CTCAACAATGCAAACTACAT+AGG | - | chr5.1:64316833-64316852 | None:intergenic | 35.0% | |
| CTCTATCATAGTGTACAGTT+TGG | - | chr5.1:64316872-64316891 | None:intergenic | 35.0% | |
| CTTTCAAAGTTAACTTACCC+TGG | + | chr5.1:64313200-64313219 | MS.gene56671:intron | 35.0% | |
| GAAAACATGCTATGATAGCT+AGG | - | chr5.1:64315367-64315386 | None:intergenic | 35.0% | |
| GCAGAATCTTCAAAATTGTG+AGG | - | chr5.1:64317073-64317092 | None:intergenic | 35.0% | |
| GTAAAGTCCAAATCTAGAGA+CGG | + | chr5.1:64313514-64313533 | MS.gene56671:CDS | 35.0% | |
| GTAGTTGATCAAATGATCAC+TGG | - | chr5.1:64312791-64312810 | None:intergenic | 35.0% | |
| GTTAGATTCGTTGGTATGTA+TGG | + | chr5.1:64313738-64313757 | MS.gene56671:intron | 35.0% | |
| GTTGAGGTTTGATATCAACA+CGG | + | chr5.1:64313549-64313568 | MS.gene56671:CDS | 35.0% | |
| TAACTAATTAAGCTTGGAGC+AGG | + | chr5.1:64313875-64313894 | MS.gene56671:intron | 35.0% | |
| TAGATTTGGACTTTACAACG+TGG | - | chr5.1:64313510-64313529 | None:intergenic | 35.0% | |
| TAGCACTAACCTTCAAATCA+AGG | - | chr5.1:64312357-64312376 | None:intergenic | 35.0% | |
| TAGCAGTTCAAACAAAGAAC+AGG | - | chr5.1:64313939-64313958 | None:intergenic | 35.0% | |
| TATCTCTCTGATCTGAACAT+GGG | - | chr5.1:64314347-64314366 | None:intergenic | 35.0% | |
| TATTTACTTCTGTGTATGGG+CGG | + | chr5.1:64315810-64315829 | MS.gene56671:CDS | 35.0% | |
| TGAAGTTCCATGCTAATGTT+AGG | + | chr5.1:64315537-64315556 | MS.gene56671:intron | 35.0% | |
| TGCAATATCTTCACAATTCC+TGG | - | chr5.1:64314707-64314726 | None:intergenic | 35.0% | |
| TGGAATTCGCATTTGATGTT+TGG | + | chr5.1:64313668-64313687 | MS.gene56671:CDS | 35.0% | |
| TGTATTATACGCAACAGCAA+AGG | + | chr5.1:64317276-64317295 | MS.gene56671:CDS | 35.0% | |
| TTAGCTGCAAATTGTATACC+TGG | - | chr5.1:64317128-64317147 | None:intergenic | 35.0% | |
| TTATCTCTCTGATCTGAACA+TGG | - | chr5.1:64314348-64314367 | None:intergenic | 35.0% | |
| TTATGAGCTAAGACCATATG+TGG | - | chr5.1:64316766-64316785 | None:intergenic | 35.0% | |
| TTCCAGATGGACAAAAAACA+CGG | - | chr5.1:64316694-64316713 | None:intergenic | 35.0% | |
| TTCGAAACATGCATCTAGAT+GGG | - | chr5.1:64316623-64316642 | None:intergenic | 35.0% | |
| TTGAAAAGCCTTTGTCTACA+AGG | - | chr5.1:64317375-64317394 | None:intergenic | 35.0% | |
| TTGAGTCAGTACATATTGTG+TGG | + | chr5.1:64313440-64313459 | MS.gene56671:CDS | 35.0% | |
| TTGGGACTAAGATTCTGTTT+GGG | + | chr5.1:64312249-64312268 | MS.gene56671:intron | 35.0% | |
| TTGTTGTGGATCTAACTGAA+AGG | + | chr5.1:64314192-64314211 | MS.gene56671:intron | 35.0% | |
| TTTAGAAGACTTTCTGATGG+AGG | - | chr5.1:64313478-64313497 | None:intergenic | 35.0% | |
| TTTCAGTTAGATCCACAACA+AGG | - | chr5.1:64314193-64314212 | None:intergenic | 35.0% | |
| ! | AAACTGCACATGTTTGTTGA+TGG | + | chr5.1:64316384-64316403 | MS.gene56671:intron | 35.0% |
| ! | CTTGATCTTGGCTGATTTAA+CGG | - | chr5.1:64311910-64311929 | None:intergenic | 35.0% |
| ! | TACTTTTATGCCTCTGCTTT+TGG | + | chr5.1:64313826-64313845 | MS.gene56671:intron | 35.0% |
| ! | TTTGGGACTAAGATTCTGTT+TGG | + | chr5.1:64312248-64312267 | MS.gene56671:intron | 35.0% |
| !! | AATTTAGATATGGTGGATGG+TGG | + | chr5.1:64314442-64314461 | MS.gene56671:CDS | 35.0% |
| !! | ACAAAAAACACGGTCTTGTT+CGG | - | chr5.1:64316684-64316703 | None:intergenic | 35.0% |
| !! | ACAATTTTGAAGATTCTGCC+AGG | + | chr5.1:64317074-64317093 | MS.gene56671:intron | 35.0% |
| !! | ATGGGATCGGTTTTTAAGAA+AGG | - | chr5.1:64316605-64316624 | None:intergenic | 35.0% |
| !! | CCTAAGGAATTTGCTAAATC+AGG | - | chr5.1:64316076-64316095 | None:intergenic | 35.0% |
| !! | TGGGATCGGTTTTTAAGAAA+GGG | - | chr5.1:64316604-64316623 | None:intergenic | 35.0% |
| !! | TTGAACCTTTGTTGTTGCTT+TGG | + | chr5.1:64317003-64317022 | MS.gene56671:intron | 35.0% |
| !! | TTGTTGCTTTGGACTGTATT+TGG | + | chr5.1:64317014-64317033 | MS.gene56671:intron | 35.0% |
| !! | TTTTTAAGAAAGGGTGGTGA+GGG | - | chr5.1:64316595-64316614 | None:intergenic | 35.0% |
| !!! | CTGTTATTTTGTCCTTGTTG+TGG | + | chr5.1:64314178-64314197 | MS.gene56671:intron | 35.0% |
| !!! | TGTTTTAGTTCCAAAAGCAG+AGG | - | chr5.1:64313839-64313858 | None:intergenic | 35.0% |
| AACATGCATCTAGATGGGAT+CGG | - | chr5.1:64316618-64316637 | None:intergenic | 40.0% | |
| AAGACTTTCTGATGGAGGAT+TGG | - | chr5.1:64313473-64313492 | None:intergenic | 40.0% | |
| ACAACTTGTCGCAAAACACT+GGG | - | chr5.1:64315468-64315487 | None:intergenic | 40.0% | |
| ACAGTCCAAAGCAACAACAA+AGG | - | chr5.1:64317011-64317030 | None:intergenic | 40.0% | |
| ACCATCTAATCCAAAGAAGG+AGG | - | chr5.1:64315082-64315101 | None:intergenic | 40.0% | |
| ACTAGCAGCTACTTAAAGCA+TGG | - | chr5.1:64314253-64314272 | None:intergenic | 40.0% | |
| ACTGGAATTAGTAGTTTGGG+AGG | + | chr5.1:64315755-64315774 | MS.gene56671:CDS | 40.0% | |
| AGACTTTCTGATGGAGGATT+GGG | - | chr5.1:64313472-64313491 | None:intergenic | 40.0% | |
| AGTGAAACTGGGAATTTGAG+GGG | - | chr5.1:64312021-64312040 | None:intergenic | 40.0% | |
| ATACGATACATATCCGACAC+TGG | - | chr5.1:64312553-64312572 | None:intergenic | 40.0% | |
| ATATCGTCCGTCTCTAGATT+TGG | - | chr5.1:64313524-64313543 | None:intergenic | 40.0% | |
| ATCTAATCCAAAGAAGGAGG+GGG | - | chr5.1:64315079-64315098 | None:intergenic | 40.0% | |
| ATGGGCGACATGTATTAACA+TGG | - | chr5.1:64315619-64315638 | None:intergenic | 40.0% | |
| ATGTCAGAAAGGAGAAAGAC+GGG | - | chr5.1:64314909-64314928 | None:intergenic | 40.0% | |
| CAGGTCCTCATATAACAATG+AGG | - | chr5.1:64314161-64314180 | None:intergenic | 40.0% | |
| CAGTGAAACTGGGAATTTGA+GGG | - | chr5.1:64312022-64312041 | None:intergenic | 40.0% | |
| CATCTAATCCAAAGAAGGAG+GGG | - | chr5.1:64315080-64315099 | None:intergenic | 40.0% | |
| CCATCTAATCCAAAGAAGGA+GGG | - | chr5.1:64315081-64315100 | None:intergenic | 40.0% | |
| CCTCATATAACAATGAGGGT+CGG | - | chr5.1:64314156-64314175 | None:intergenic | 40.0% | |
| CTAGGCATCATTGCACAATT+TGG | - | chr5.1:64315349-64315368 | None:intergenic | 40.0% | |
| CTTCTTTCAGTGGAATTGGT+TGG | + | chr5.1:64317175-64317194 | MS.gene56671:CDS | 40.0% | |
| GAACCTTGAATCAGTGAAAC+TGG | - | chr5.1:64312033-64312052 | None:intergenic | 40.0% | |
| GAGGAACTTCTGAACTAAAC+AGG | - | chr5.1:64314850-64314869 | None:intergenic | 40.0% | |
| GATCAGTAATTCGTAGCTGA+TGG | + | chr5.1:64312819-64312838 | MS.gene56671:intron | 40.0% | |
| GCATATATACTCCTCGGATT+AGG | + | chr5.1:64312521-64312540 | MS.gene56671:intron | 40.0% | |
| GCCCATACACAGAAGTAAAT+AGG | - | chr5.1:64315811-64315830 | None:intergenic | 40.0% | |
| GTACATTGTCTCACCTTGTT+AGG | + | chr5.1:64315488-64315507 | MS.gene56671:intron | 40.0% | |
| GTACTTCATCTTGTGTGTAG+AGG | + | chr5.1:64316214-64316233 | MS.gene56671:intron | 40.0% | |
| GTTCGAAACATGCATCTAGA+TGG | - | chr5.1:64316624-64316643 | None:intergenic | 40.0% | |
| TACGATACATATCCGACACT+GGG | - | chr5.1:64312552-64312571 | None:intergenic | 40.0% | |
| TCAGTGAAACTGGGAATTTG+AGG | - | chr5.1:64312023-64312042 | None:intergenic | 40.0% | |
| TCGTTAAACACCAATCCGTT+CGG | - | chr5.1:64316725-64316744 | None:intergenic | 40.0% | |
| TCTATCTGTCAGCATGAACA+TGG | - | chr5.1:64316657-64316676 | None:intergenic | 40.0% | |
| TGGAAGTAGAAACGATTACC+TGG | + | chr5.1:64312737-64312756 | MS.gene56671:intron | 40.0% | |
| TGTCATATTTCCCTGCTCTT+TGG | + | chr5.1:64313645-64313664 | MS.gene56671:CDS | 40.0% | |
| TTACCCTGGAATTAGAGAGA+GGG | + | chr5.1:64313214-64313233 | MS.gene56671:intron | 40.0% | |
| TTACCTTTAACCCATAACGG+GGG | - | chr5.1:64314763-64314782 | None:intergenic | 40.0% | |
| TTCTGCTCTGTAAAATCCAG+TGG | - | chr5.1:64316540-64316559 | None:intergenic | 40.0% | |
| TTTCTTGTCGCAAATGCAAC+TGG | + | chr5.1:64314733-64314752 | MS.gene56671:CDS | 40.0% | |
| TTTGTGAAAGAATGCTGCCT+TGG | - | chr5.1:64314505-64314524 | None:intergenic | 40.0% | |
| ! | GACTCTTTTGTTCCTTTCTG+TGG | + | chr5.1:64315322-64315341 | MS.gene56671:intron | 40.0% |
| ! | GTGGATTTTGCCTTTGTTAC+AGG | + | chr5.1:64315710-64315729 | MS.gene56671:intron | 40.0% |
| ! | TGTCCATTGGTTAGATTCGT+TGG | + | chr5.1:64313729-64313748 | MS.gene56671:CDS | 40.0% |
| !! | ATAGTCGCAATGTCTGGTTT+TGG | + | chr5.1:64315867-64315886 | MS.gene56671:intron | 40.0% |
| !! | ATATGTACTGACTCAAGTCG+AGG | - | chr5.1:64313436-64313455 | None:intergenic | 40.0% |
| !! | GATCGGTTTTTAAGAAAGGG+TGG | - | chr5.1:64316601-64316620 | None:intergenic | 40.0% |
| !! | GTTTTGAGCTAGTGAAGTTG+AGG | - | chr5.1:64314869-64314888 | None:intergenic | 40.0% |
| !! | GTTTTTAAGAAAGGGTGGTG+AGG | - | chr5.1:64316596-64316615 | None:intergenic | 40.0% |
| !! | TTCCCAGTTTCACTGATTCA+AGG | + | chr5.1:64312027-64312046 | MS.gene56671:CDS | 40.0% |
| !! | TTGTAACGAGCTTTTGGTGT+TGG | + | chr5.1:64312474-64312493 | MS.gene56671:intron | 40.0% |
| !! | TTTGATGATGAACTGCTTGG+AGG | + | chr5.1:64316967-64316986 | MS.gene56671:intron | 40.0% |
| !! | TTTTAAGAAAGGGTGGTGAG+GGG | - | chr5.1:64316594-64316613 | None:intergenic | 40.0% |
| !!! | AGTGTGTTTTTGGTCAGTGT+TGG | + | chr5.1:64312849-64312868 | MS.gene56671:intron | 40.0% |
| !!! | CAATGTCTGGTTTTGGTGAT+TGG | + | chr5.1:64315874-64315893 | MS.gene56671:intron | 40.0% |
| !!! | GACTTCTGGTTTTAATCTCC+TGG | - | chr5.1:64317095-64317114 | None:intergenic | 40.0% |
| !!! | GCTTTTGGTGTTGGGAATTT+TGG | + | chr5.1:64312483-64312502 | MS.gene56671:intron | 40.0% |
| !!! | GTGTGTTTTTGGTCAGTGTT+GGG | + | chr5.1:64312850-64312869 | MS.gene56671:intron | 40.0% |
| !!! | TGTAACGAGCTTTTGGTGTT+GGG | + | chr5.1:64312475-64312494 | MS.gene56671:intron | 40.0% |
| AAATTCTGATGGCATGGTGG+TGG | + | chr5.1:64317227-64317246 | MS.gene56671:CDS | 45.0% | |
| AACACAATTCTGCTACAGCC+TGG | + | chr5.1:64316934-64316953 | MS.gene56671:intron | 45.0% | |
| AACAGTACATCCGAACGGAT+TGG | + | chr5.1:64316712-64316731 | MS.gene56671:intron | 45.0% | |
| AATTCTTCCCCCTCCTTCTT+TGG | + | chr5.1:64315069-64315088 | MS.gene56671:intron | 45.0% | |
| ACAAATCCCACCATTGCATC+CGG | - | chr5.1:64313703-64313722 | None:intergenic | 45.0% | |
| ACGGACGATATGTGAAGTTG+AGG | + | chr5.1:64313533-64313552 | MS.gene56671:CDS | 45.0% | |
| AGCAAAGGCGAGTACATTCT+TGG | + | chr5.1:64317291-64317310 | MS.gene56671:CDS | 45.0% | |
| AGGAACAAGAAGTCAAGGAC+TGG | - | chr5.1:64315174-64315193 | None:intergenic | 45.0% | |
| ATATAGCATGGTGCTCTCCA+AGG | + | chr5.1:64314485-64314504 | MS.gene56671:CDS | 45.0% | |
| CACAACTTGTCGCAAAACAC+TGG | - | chr5.1:64315469-64315488 | None:intergenic | 45.0% | |
| CATATTTCCCTGCTCTTTGG+TGG | + | chr5.1:64313648-64313667 | MS.gene56671:CDS | 45.0% | |
| CCAGACATTGCGACTATCAA+CGG | - | chr5.1:64315864-64315883 | None:intergenic | 45.0% | |
| CCGACCCTCATTGTTATATG+AGG | + | chr5.1:64314153-64314172 | MS.gene56671:intron | 45.0% | |
| CTGAAGTCATGCTTGAGAGA+AGG | + | chr5.1:64313102-64313121 | MS.gene56671:intron | 45.0% | |
| CTTACCCTGGAATTAGAGAG+AGG | + | chr5.1:64313213-64313232 | MS.gene56671:intron | 45.0% | |
| GAAACCTCTGTTCAATCCGA+CGG | - | chr5.1:64311869-64311888 | None:intergenic | 45.0% | |
| GAATCTAACCAATGGACACG+AGG | - | chr5.1:64313727-64313746 | None:intergenic | 45.0% | |
| GAGCTAAGACCATATGTGGA+GGG | - | chr5.1:64316762-64316781 | None:intergenic | 45.0% | |
| GATTTGTACCTCGTGTCCAT+TGG | + | chr5.1:64313716-64313735 | MS.gene56671:CDS | 45.0% | |
| GCACAATTTGGTCCACAGAA+AGG | - | chr5.1:64315337-64315356 | None:intergenic | 45.0% | |
| GGGGGAAACAAAACAGAATC+TGG | + | chr5.1:64313234-64313253 | MS.gene56671:intron | 45.0% | |
| GTCGGATTGAACAGAGGTTT+CGG | + | chr5.1:64311868-64311887 | MS.gene56671:CDS | 45.0% | |
| GTTTGGGAGGTCATAGTGAA+CGG | + | chr5.1:64315768-64315787 | MS.gene56671:CDS | 45.0% | |
| TACCCTGGAATTAGAGAGAG+GGG | + | chr5.1:64313215-64313234 | MS.gene56671:intron | 45.0% | |
| TATAACCAGCCCTCCACATA+TGG | + | chr5.1:64316750-64316769 | MS.gene56671:intron | 45.0% | |
| TGAGCTAAGACCATATGTGG+AGG | - | chr5.1:64316763-64316782 | None:intergenic | 45.0% | |
| TGATGTTTGGCAAAGTGCAC+CGG | + | chr5.1:64313681-64313700 | MS.gene56671:CDS | 45.0% | |
| TGGACTGTATTTGGAGAGCT+AGG | + | chr5.1:64317023-64317042 | MS.gene56671:intron | 45.0% | |
| TGGGGATTATGGCTGTTAGA+GGG | - | chr5.1:64313968-64313987 | None:intergenic | 45.0% | |
| TTCGCGAGAAACATCTGTCA+TGG | + | chr5.1:64317315-64317334 | MS.gene56671:CDS | 45.0% | |
| TTCGGATGTACTGTTCCAGA+TGG | - | chr5.1:64316707-64316726 | None:intergenic | 45.0% | |
| TTGATCCAATCATCACGTGG+TGG | - | chr5.1:64317204-64317223 | None:intergenic | 45.0% | |
| TTGGGGATTATGGCTGTTAG+AGG | - | chr5.1:64313969-64313988 | None:intergenic | 45.0% | |
| ! | CCCTCCTTCTTTGGATTAGA+TGG | + | chr5.1:64315078-64315097 | MS.gene56671:intron | 45.0% |
| ! | CTTCTCGCGTTTTCTTCTAC+TGG | + | chr5.1:64311960-64311979 | MS.gene56671:CDS | 45.0% |
| ! | GATCTTGGCTGATTTAACGG+TGG | - | chr5.1:64311907-64311926 | None:intergenic | 45.0% |
| ! | TCTGGAACAGTACATCCGAA+CGG | + | chr5.1:64316707-64316726 | MS.gene56671:intron | 45.0% |
| ! | TGATGTGTTTTCTCTGCCAC+TGG | + | chr5.1:64316521-64316540 | MS.gene56671:intron | 45.0% |
| !! | AGGTTTTATGCTGCCCATCA+TGG | + | chr5.1:64315557-64315576 | MS.gene56671:intron | 45.0% |
| !! | GAACGGATTGGTGTTTAACG+AGG | + | chr5.1:64316724-64316743 | MS.gene56671:intron | 45.0% |
| !! | GTGGATAACGGTTCTAAAGC+TGG | + | chr5.1:64317246-64317265 | MS.gene56671:CDS | 45.0% |
| !!! | GACCGTGTTTTTTGTCCATC+TGG | + | chr5.1:64316689-64316708 | MS.gene56671:intron | 45.0% |
| ACACTGGGTAGCATGGTCAT+TGG | - | chr5.1:64315453-64315472 | None:intergenic | 50.0% | |
| ACCCTGGAATTAGAGAGAGG+GGG | + | chr5.1:64313216-64313235 | MS.gene56671:intron | 50.0% | |
| CAGAAGTCATGAGCTGATCC+AGG | + | chr5.1:64317107-64317126 | MS.gene56671:CDS | 50.0% | |
| CTGGATCAGCTCATGACTTC+TGG | - | chr5.1:64317109-64317128 | None:intergenic | 50.0% | |
| GCGAATTCCACCAAAGAGCA+GGG | - | chr5.1:64313658-64313677 | None:intergenic | 50.0% | |
| GGAGTGCAACTTCAACAGCT+TGG | + | chr5.1:64316405-64316424 | MS.gene56671:intron | 50.0% | |
| GTGGACGGGTACATATAGCA+TGG | + | chr5.1:64314473-64314492 | MS.gene56671:CDS | 50.0% | |
| TAAGACCATATGTGGAGGGC+TGG | - | chr5.1:64316758-64316777 | None:intergenic | 50.0% | |
| TCCCCCTCTCTCTAATTCCA+GGG | - | chr5.1:64313220-64313239 | None:intergenic | 50.0% | |
| TCGCAAAACACTGGGTAGCA+TGG | - | chr5.1:64315460-64315479 | None:intergenic | 50.0% | |
| TGAACCGTCGGATTGAACAG+AGG | + | chr5.1:64311862-64311881 | MS.gene56671:CDS | 50.0% | |
| TGCGAATTCCACCAAAGAGC+AGG | - | chr5.1:64313659-64313678 | None:intergenic | 50.0% | |
| TTCCCCCTCTCTCTAATTCC+AGG | - | chr5.1:64313221-64313240 | None:intergenic | 50.0% | |
| !! | AACGGTTCTAAAGCTGGACG+TGG | + | chr5.1:64317252-64317271 | MS.gene56671:CDS | 50.0% |
| !! | CCGTTGATAGTCGCAATGTC+TGG | + | chr5.1:64315861-64315880 | MS.gene56671:intron | 50.0% |
| !! | GATGGCATGGTGGTGGATAA+CGG | + | chr5.1:64317234-64317253 | MS.gene56671:CDS | 50.0% |
| AACTGGTGCACCCCCGTTAT+GGG | + | chr5.1:64314750-64314769 | MS.gene56671:CDS | 55.0% | |
| AAGTGCACCGGATGCAATGG+TGG | + | chr5.1:64313693-64313712 | MS.gene56671:CDS | 55.0% | |
| AGTGCACCGGATGCAATGGT+GGG | + | chr5.1:64313694-64313713 | MS.gene56671:CDS | 55.0% | |
| GATTAGGCGTGTCCCAGTGT+CGG | + | chr5.1:64312537-64312556 | MS.gene56671:intron | 55.0% | |
| GCAAAGTGCACCGGATGCAA+TGG | + | chr5.1:64313690-64313709 | MS.gene56671:CDS | 55.0% | |
| GGCAACCACCACGTGATGAT+TGG | + | chr5.1:64317196-64317215 | MS.gene56671:CDS | 55.0% | |
| ! | ATGGTGGTCTGTGTGGTGGA+CGG | + | chr5.1:64314458-64314477 | MS.gene56671:CDS | 55.0% |
| ! | GCACCCCCGTTATGGGTTAA+AGG | + | chr5.1:64314757-64314776 | MS.gene56671:CDS | 55.0% |
| ! | GGAGCTGTTGGTTGAACCGT+CGG | + | chr5.1:64311850-64311869 | MS.gene56671:CDS | 55.0% |
| !! | ATGGTGGATGGTGGTCTGTG+TGG | + | chr5.1:64314451-64314470 | MS.gene56671:CDS | 55.0% |
| ACTGGGACACGCCTAATCCG+AGG | - | chr5.1:64312535-64312554 | None:intergenic | 60.0% | |
| CAACTGGTGCACCCCCGTTA+TGG | + | chr5.1:64314749-64314768 | MS.gene56671:CDS | 60.0% | |
| ! | GTGGATGGTGGTCTGTGTGG+TGG | + | chr5.1:64314454-64314473 | MS.gene56671:CDS | 60.0% |
| !! | TGGTGGTCTGTGTGGTGGAC+GGG | + | chr5.1:64314459-64314478 | MS.gene56671:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 64311843 | 64317407 | 64311843 | ID=MS.gene56671 |
| chr5.1 | mRNA | 64311843 | 64317407 | 64311843 | ID=MS.gene56671.t1;Parent=MS.gene56671 |
| chr5.1 | exon | 64311843 | 64312048 | 64311843 | ID=MS.gene56671.t1.exon1;Parent=MS.gene56671.t1 |
| chr5.1 | CDS | 64311843 | 64312048 | 64311843 | ID=cds.MS.gene56671.t1;Parent=MS.gene56671.t1 |
| chr5.1 | exon | 64313354 | 64313750 | 64313354 | ID=MS.gene56671.t1.exon2;Parent=MS.gene56671.t1 |
| chr5.1 | CDS | 64313354 | 64313750 | 64313354 | ID=cds.MS.gene56671.t1;Parent=MS.gene56671.t1 |
| chr5.1 | exon | 64314426 | 64314589 | 64314426 | ID=MS.gene56671.t1.exon3;Parent=MS.gene56671.t1 |
| chr5.1 | CDS | 64314426 | 64314589 | 64314426 | ID=cds.MS.gene56671.t1;Parent=MS.gene56671.t1 |
| chr5.1 | exon | 64314708 | 64314778 | 64314708 | ID=MS.gene56671.t1.exon4;Parent=MS.gene56671.t1 |
| chr5.1 | CDS | 64314708 | 64314778 | 64314708 | ID=cds.MS.gene56671.t1;Parent=MS.gene56671.t1 |
| chr5.1 | exon | 64315732 | 64315849 | 64315732 | ID=MS.gene56671.t1.exon5;Parent=MS.gene56671.t1 |
| chr5.1 | CDS | 64315732 | 64315849 | 64315732 | ID=cds.MS.gene56671.t1;Parent=MS.gene56671.t1 |
| chr5.1 | exon | 64317086 | 64317407 | 64317086 | ID=MS.gene56671.t1.exon6;Parent=MS.gene56671.t1 |
| chr5.1 | CDS | 64317086 | 64317407 | 64317086 | ID=cds.MS.gene56671.t1;Parent=MS.gene56671.t1 |
| Gene Sequence |
| Protein sequence |
