Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56737.t1 | XP_004489359.1 | 88.9 | 324 | 34 | 2 | 1 | 322 | 1 | 324 | 5.40E-137 | 497.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56737.t1 | O34331 | 28.9 | 190 | 125 | 3 | 114 | 303 | 1 | 180 | 1.4e-13 | 78.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56737.t1 | A0A1S2XJY0 | 88.9 | 324 | 34 | 2 | 1 | 322 | 1 | 324 | 3.9e-137 | 497.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene56737 | 0.828025 | 1.13E-54 | -1.69E-46 |
| MS.gene049173 | MS.gene56737 | 0.844748 | 6.24E-59 | -1.69E-46 |
| MS.gene049217 | MS.gene56737 | 0.845326 | 4.36E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene56737 | 0.83326 | 5.90E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene56737 | 0.825217 | 5.29E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene56737 | 0.800602 | 1.33E-48 | -1.69E-46 |
| MS.gene04939 | MS.gene56737 | 0.802234 | 6.18E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene56737 | 0.808973 | 2.38E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene56737 | 0.814144 | 1.79E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene56737 | 0.847049 | 1.48E-59 | -1.69E-46 |
| MS.gene050165 | MS.gene56737 | 0.855701 | 5.29E-62 | -1.69E-46 |
| MS.gene050333 | MS.gene56737 | 0.832676 | 8.25E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene56737 | 0.841516 | 4.53E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene56737 | 0.805307 | 1.42E-49 | -1.69E-46 |
| MS.gene05100 | MS.gene56737 | 0.837711 | 4.42E-57 | -1.69E-46 |
| MS.gene051666 | MS.gene56737 | 0.802536 | 5.36E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene56737 | 0.80218 | 6.34E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene56737 | 0.812081 | 5.07E-51 | -1.69E-46 |
| MS.gene051949 | MS.gene56737 | 0.834522 | 2.85E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene56737 | 0.810825 | 9.51E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene56737 | 0.83044 | 2.93E-55 | -1.69E-46 |
| MS.gene052870 | MS.gene56737 | 0.817382 | 3.40E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene56737 | 0.834914 | 2.27E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene56737 | 0.812633 | 3.84E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene56737 | 0.807706 | 4.43E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene56737 | 0.819875 | 9.23E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene56737 | 0.819192 | 1.32E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene56737 | 0.802363 | 5.81E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene56737 | 0.817555 | 3.10E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene56737 | 0.814454 | 1.53E-51 | -1.69E-46 |
| MS.gene055397 | MS.gene56737 | 0.800618 | 1.32E-48 | -1.69E-46 |
| MS.gene055502 | MS.gene56737 | 0.808134 | 3.59E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene56737 | 0.801573 | 8.45E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene56737 | 0.800769 | 1.23E-48 | -1.69E-46 |
| MS.gene055941 | MS.gene56737 | 0.804365 | 2.24E-49 | -1.69E-46 |
| MS.gene056549 | MS.gene56737 | 0.827374 | 1.62E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene56737 | 0.81388 | 2.05E-51 | -1.69E-46 |
| MS.gene056692 | MS.gene56737 | 0.82389 | 1.09E-53 | -1.69E-46 |
| MS.gene056903 | MS.gene56737 | 0.811889 | 5.59E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene56737 | 0.806846 | 6.75E-50 | -1.69E-46 |
| MS.gene057246 | MS.gene56737 | 0.803428 | 3.50E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene56737 | 0.809077 | 2.26E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene56737 | 0.834428 | 3.01E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene56737 | 0.826414 | 2.75E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene56737 | 0.803099 | 4.10E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene56737 | 0.819794 | 9.63E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene56737 | 0.811477 | 6.87E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene56737 | 0.8059 | 1.07E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene56737 | 0.819323 | 1.23E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene56737 | 0.809734 | 1.63E-50 | -1.69E-46 |
| MS.gene059029 | MS.gene56737 | 0.805949 | 1.04E-49 | -1.69E-46 |
| MS.gene059102 | MS.gene56737 | -0.804138 | 2.49E-49 | -1.69E-46 |
| MS.gene05912 | MS.gene56737 | 0.850846 | 1.30E-60 | -1.69E-46 |
| MS.gene05934 | MS.gene56737 | 0.818523 | 1.88E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene56737 | 0.840356 | 9.13E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene56737 | 0.814236 | 1.71E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene56737 | 0.809156 | 2.18E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene56737 | 0.814637 | 1.39E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene56737 | 0.863856 | 1.85E-64 | -1.69E-46 |
| MS.gene061150 | MS.gene56737 | 0.821537 | 3.83E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56737.t1 | MTR_6g009400 | 91.022 | 323 | 24 | 2 | 1 | 318 | 1 | 323 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56737.t1 | AT3G28460 | 64.744 | 312 | 101 | 5 | 8 | 314 | 7 | 314 | 1.37e-134 | 385 |
| MS.gene56737.t1 | AT3G28460 | 70.522 | 268 | 75 | 2 | 47 | 314 | 6 | 269 | 1.61e-134 | 383 |
| MS.gene56737.t1 | AT3G28460 | 62.132 | 272 | 94 | 5 | 8 | 274 | 7 | 274 | 5.83e-108 | 317 |
Find 89 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGACACTCTTGGCAATTTA+TGG | 0.126823 | 6.2:-4948319 | MS.gene56737:CDS |
| CCAACGACTACATAGGTTAT+TGG | 0.246833 | 6.2:-4951801 | MS.gene56737:intron |
| TGCAGCCTTTGATATATTAC+AGG | 0.318111 | 6.2:-4951703 | MS.gene56737:intron |
| GGGCGTACATCCATGCTATT+TGG | 0.324471 | 6.2:+4951747 | None:intergenic |
| GAACGTGCTGAGCAATTTGT+AGG | 0.324735 | 6.2:-4950845 | MS.gene56737:intron |
| GGTGAGTGAAGAAGAGGGTT+TGG | 0.332965 | 6.2:+4953881 | None:intergenic |
| AATCCGGTCACCTCTAAGTT+TGG | 0.367798 | 6.2:+4950914 | None:intergenic |
| TATTTAGTCCAAGAGGAAAA+AGG | 0.375120 | 6.2:-4953126 | MS.gene56737:intron |
| TGAAGAAAGATGATTGGTTT+TGG | 0.377488 | 6.2:+4953938 | None:intergenic |
| AGAAGGTGAAGAAAGATGAT+TGG | 0.401355 | 6.2:+4953932 | None:intergenic |
| ATTTCAGAATCACCCTTTGT+TGG | 0.401628 | 6.2:-4948920 | MS.gene56737:CDS |
| TACAAGTCTAACCAGCTTCC+AGG | 0.407397 | 6.2:+4951314 | None:intergenic |
| GCATAATCAACTTCGGCATA+TGG | 0.408226 | 6.2:+4948959 | None:intergenic |
| TACGACACATAAATTGCTTC+AGG | 0.418480 | 6.2:-4953039 | MS.gene56737:intron |
| CCTTTCACGACCTCCATCAT+GGG | 0.432274 | 6.2:+4951726 | None:intergenic |
| CATAAATTGCCAAGAGTGTC+CGG | 0.439452 | 6.2:+4948320 | None:intergenic |
| TGTGTCGTACGAGGAGGCTT+AGG | 0.446140 | 6.2:+4953053 | None:intergenic |
| AGAAGAGGAAGAAGAGAAGA+AGG | 0.453274 | 6.2:+4953915 | None:intergenic |
| CAGATAACTGATAGGCGGTT+TGG | 0.457124 | 6.2:-4948343 | MS.gene56737:CDS |
| AGAAGAGGGTTTGGAGGTAA+AGG | 0.459927 | 6.2:+4953890 | None:intergenic |
| ATCTTGCGGACCCCTTGTTA+AGG | 0.459960 | 6.2:-4948758 | MS.gene56737:intron |
| ACCTTTCACGACCTCCATCA+TGG | 0.477371 | 6.2:+4951725 | None:intergenic |
| GCGGTTTGGCCGGACACTCT+TGG | 0.478560 | 6.2:-4948329 | MS.gene56737:CDS |
| GACTGAATCATCAATGAATC+CGG | 0.478832 | 6.2:+4950898 | None:intergenic |
| TGCTTCAATTCCAACAGAAC+CGG | 0.478995 | 6.2:+4951283 | None:intergenic |
| TCCTTCGAAAACCGACATGC+TGG | 0.483247 | 6.2:-4948782 | MS.gene56737:CDS |
| GAAGAGGGTGAGTGAAGAAG+AGG | 0.485411 | 6.2:+4953875 | None:intergenic |
| CGAGGAGGCTTAGGTTCCTC+AGG | 0.487803 | 6.2:+4953062 | None:intergenic |
| TTGAACTACAGATAACTGAT+AGG | 0.488177 | 6.2:-4948351 | MS.gene56737:intron |
| CGTCCAAACTTAGAGGTGAC+CGG | 0.490270 | 6.2:-4950917 | MS.gene56737:CDS |
| AAGAGGGTGAGTGAAGAAGA+GGG | 0.502965 | 6.2:+4953876 | None:intergenic |
| GAGTGAAGAAGAGGGTTTGG+AGG | 0.508207 | 6.2:+4953884 | None:intergenic |
| AGAAGTGGTGAGTGTGTTGG+AGG | 0.519714 | 6.2:+4953969 | None:intergenic |
| TGCAGAATCAGGAAATGGGT+TGG | 0.523471 | 6.2:-4953575 | MS.gene56737:intron |
| AGAATCACCCTTTGTTGGCA+AGG | 0.523800 | 6.2:-4948915 | MS.gene56737:CDS |
| AAAATCTTACTTGAACGGTA+TGG | 0.523962 | 6.2:-4953538 | MS.gene56737:CDS |
| AGAAGAAGTGGTGAGTGTGT+TGG | 0.525870 | 6.2:+4953966 | None:intergenic |
| CATCCTTGAGACCTGGAAGC+TGG | 0.527333 | 6.2:-4951325 | MS.gene56737:CDS |
| TGCTTGAATTTACCTTAACA+AGG | 0.530651 | 6.2:+4948746 | None:intergenic |
| CTTCCAGGTCTCAAGGATGC+AGG | 0.530951 | 6.2:+4951329 | None:intergenic |
| TTAGACTTGTATAGTGGTAC+CGG | 0.539201 | 6.2:-4951302 | MS.gene56737:CDS |
| AAAGTGTCCTTGCCAACAAA+GGG | 0.541708 | 6.2:+4948908 | None:intergenic |
| GGCAATTTATGGACCAACAT+GGG | 0.542760 | 6.2:-4948308 | MS.gene56737:CDS |
| CCCATGATGGAGGTCGTGAA+AGG | 0.545223 | 6.2:-4951726 | MS.gene56737:CDS |
| CTTACTTGAAGAAGAGAAGA+GGG | 0.545272 | 6.2:+4953860 | None:intergenic |
| TATAGTGGTACCGGTTCTGT+TGG | 0.546355 | 6.2:-4951293 | MS.gene56737:CDS |
| GAGAAGCAAAAGACAAGAGG+AGG | 0.549129 | 6.2:-4953104 | MS.gene56737:CDS |
| AGCTGGTTAGACTTGTATAG+TGG | 0.550828 | 6.2:-4951308 | MS.gene56737:CDS |
| CATGGATGTACGCCCCATGA+TGG | 0.551284 | 6.2:-4951739 | MS.gene56737:CDS |
| AAAAGTGTCCTTGCCAACAA+AGG | 0.552534 | 6.2:+4948907 | None:intergenic |
| TAACCAGCTTCCAGGTCTCA+AGG | 0.553774 | 6.2:+4951322 | None:intergenic |
| TAACTGATAGGCGGTTTGGC+CGG | 0.561860 | 6.2:-4948339 | MS.gene56737:CDS |
| TCAATACCTCGGAGCATCCT+CGG | 0.568075 | 6.2:+4951255 | None:intergenic |
| TGGTACCTGTAATATATCAA+AGG | 0.573403 | 6.2:+4951698 | None:intergenic |
| AATCAACTTCGGCATATGGA+GGG | 0.576441 | 6.2:+4948963 | None:intergenic |
| TTGGAGGTAAAGGTAAGAAG+AGG | 0.577617 | 6.2:+4953900 | None:intergenic |
| AGAAGCAAAAGACAAGAGGA+GGG | 0.584569 | 6.2:-4953103 | MS.gene56737:CDS |
| AAGAGGAGGGAAACAAGTGC+AGG | 0.585690 | 6.2:-4953090 | MS.gene56737:CDS |
| CTTGAATTTACCTTAACAAG+GGG | 0.586373 | 6.2:+4948748 | None:intergenic |
| TAATCAACTTCGGCATATGG+AGG | 0.590868 | 6.2:+4948962 | None:intergenic |
| AAGGAGAAGCAAAAGACAAG+AGG | 0.591762 | 6.2:-4953107 | MS.gene56737:CDS |
| GAAGTGGTGAGTGTGTTGGA+GGG | 0.592049 | 6.2:+4953970 | None:intergenic |
| TTGATTATGCGGTTCTGATG+AGG | 0.593937 | 6.2:-4948946 | MS.gene56737:CDS |
| ATCAACTTCGGCATATGGAG+GGG | 0.594969 | 6.2:+4948964 | None:intergenic |
| ACCGACATGCTGGAATCTTG+CGG | 0.595355 | 6.2:-4948772 | MS.gene56737:CDS |
| CAGAACCGCATAATCAACTT+CGG | 0.597822 | 6.2:+4948952 | None:intergenic |
| TGGCAATTTATGGACCAACA+TGG | 0.601397 | 6.2:-4948309 | MS.gene56737:CDS |
| ACGACTACATAGGTTATTGG+AGG | 0.601598 | 6.2:-4951798 | MS.gene56737:intron |
| GCTTGAATTTACCTTAACAA+GGG | 0.603556 | 6.2:+4948747 | None:intergenic |
| GCTACTCTCACCAAATAGCA+TGG | 0.604667 | 6.2:-4951757 | MS.gene56737:CDS |
| AGTCCTGCATCCTTGAGACC+TGG | 0.604865 | 6.2:-4951332 | MS.gene56737:CDS |
| TCCGCAAGATTCCAGCATGT+CGG | 0.609206 | 6.2:+4948771 | None:intergenic |
| TATAATGCCAAGGCGGCTGG+TGG | 0.610188 | 6.2:-4951356 | MS.gene56737:intron |
| ACTTACTTGAAGAAGAGAAG+AGG | 0.615821 | 6.2:+4953859 | None:intergenic |
| GGATGTACGCCCCATGATGG+AGG | 0.618890 | 6.2:-4951736 | MS.gene56737:CDS |
| AACTACAGATAACTGATAGG+CGG | 0.628659 | 6.2:-4948348 | MS.gene56737:intron |
| AATTTATGTGTCGTACGAGG+AGG | 0.630888 | 6.2:+4953047 | None:intergenic |
| TGTTCACATGCAGGAAACAG+TGG | 0.638456 | 6.2:-4949010 | MS.gene56737:intron |
| ATATGCCGAAGTTGATTATG+CGG | 0.640316 | 6.2:-4948957 | MS.gene56737:CDS |
| AAGTGGTGAGTGTGTTGGAG+GGG | 0.640997 | 6.2:+4953971 | None:intergenic |
| GTGCAACTATTTAGTCCAAG+AGG | 0.641348 | 6.2:-4953133 | MS.gene56737:intron |
| GGAATTGAAGCACTTAGCCG+AGG | 0.644882 | 6.2:-4951272 | MS.gene56737:CDS |
| GGAGGCTTAGGTTCCTCAGG+TGG | 0.648801 | 6.2:+4953065 | None:intergenic |
| CTTTCACGACCTCCATCATG+GGG | 0.656275 | 6.2:+4951727 | None:intergenic |
| AGCAATTTATGTGTCGTACG+AGG | 0.674970 | 6.2:+4953044 | None:intergenic |
| AAAACATCTGATACAACCCA+TGG | 0.699216 | 6.2:+4950941 | None:intergenic |
| ACAAGTGCAGGATCCACCTG+AGG | 0.726554 | 6.2:-4953078 | MS.gene56737:CDS |
| ACTTAGCCGAGGATGCTCCG+AGG | 0.757908 | 6.2:-4951261 | MS.gene56737:intron |
| GTTCGAAGAATTTCTCAACG+CGG | 0.768031 | 6.2:+4950864 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATGTACCAAATA+CGG | + | chr6.2:4953020-4953039 | None:intergenic | 15.0% |
| !! | ACAAAATAAATAACTCTTAT+TGG | + | chr6.2:4949764-4949783 | None:intergenic | 15.0% |
| !!! | AATCTCATATTTTATTGTAA+TGG | + | chr6.2:4949698-4949717 | None:intergenic | 15.0% |
| !!! | ACTTTATAGAAATTTGTTTT+TGG | - | chr6.2:4950391-4950410 | MS.gene56737:intron | 15.0% |
| !!! | AGTTTTTTAATGATTTTTTG+TGG | - | chr6.2:4948608-4948627 | MS.gene56737:intron | 15.0% |
| !!! | GTAAATTACAACTTTTATAA+GGG | - | chr6.2:4948831-4948850 | MS.gene56737:intron | 15.0% |
| !!! | TGGTTTTTAAAAAAAAACAA+GGG | - | chr6.2:4951861-4951880 | MS.gene56737:intron | 15.0% |
| !!! | TGTAAATTACAACTTTTATA+AGG | - | chr6.2:4948830-4948849 | MS.gene56737:intron | 15.0% |
| !!! | TTATTTAAGATTATCTATTG+AGG | + | chr6.2:4950761-4950780 | None:intergenic | 15.0% |
| !!! | TTATTTTATCGAATAATTAC+CGG | - | chr6.2:4948516-4948535 | MS.gene56737:intron | 15.0% |
| !!! | TTGGTTTTTAAAAAAAAACA+AGG | - | chr6.2:4951860-4951879 | MS.gene56737:intron | 15.0% |
| !!! | TTGTTTTTTTTTAAAAACCA+AGG | + | chr6.2:4951861-4951880 | None:intergenic | 15.0% |
| !! | AAACATATGCTAAATTAAGA+TGG | + | chr6.2:4950222-4950241 | None:intergenic | 20.0% |
| !! | AACAAAGGAATTATTAGAAA+AGG | - | chr6.2:4952813-4952832 | MS.gene56737:intron | 20.0% |
| !! | AACTATGTAAGAAAATAGAA+GGG | - | chr6.2:4949450-4949469 | MS.gene56737:intron | 20.0% |
| !! | AATATGATGATAATATTGCT+AGG | - | chr6.2:4949920-4949939 | MS.gene56737:intron | 20.0% |
| !! | AGAAAAAAATCTTACTTGAA+CGG | - | chr6.2:4948702-4948721 | MS.gene56737:intron | 20.0% |
| !! | AGAAAAAAATGCATTGTAAA+TGG | + | chr6.2:4951216-4951235 | None:intergenic | 20.0% |
| !! | ATATGATGATAATATTGCTA+GGG | - | chr6.2:4949921-4949940 | MS.gene56737:intron | 20.0% |
| !! | CAATATTATCATCATATTGT+TGG | + | chr6.2:4949918-4949937 | None:intergenic | 20.0% |
| !! | GAAAAAAATGCATTGTAAAT+GGG | + | chr6.2:4951215-4951234 | None:intergenic | 20.0% |
| !! | TAACTATGTAAGAAAATAGA+AGG | - | chr6.2:4949449-4949468 | MS.gene56737:intron | 20.0% |
| !! | TATGGTAAGAAAAATTATCT+AGG | - | chr6.2:4953186-4953205 | MS.gene56737:intron | 20.0% |
| !!! | ATTGTTAAGAATTTTGTTCA+AGG | - | chr6.2:4952875-4952894 | MS.gene56737:intron | 20.0% |
| !!! | CAATGCATTTTTTTCTTTTA+TGG | - | chr6.2:4951220-4951239 | MS.gene56737:intron | 20.0% |
| !!! | TCATATTGTTGGATATTTTA+CGG | + | chr6.2:4949907-4949926 | None:intergenic | 20.0% |
| !!! | TGATTGAGATGTATTTTATA+CGG | - | chr6.2:4953087-4953106 | MS.gene56737:CDS | 20.0% |
| !!! | TTAACAAAAGCAAACATTTT+AGG | - | chr6.2:4951261-4951280 | MS.gene56737:intron | 20.0% |
| !!! | TTTTCTTACTTTCTTATTCA+TGG | - | chr6.2:4953374-4953393 | MS.gene56737:intron | 20.0% |
| !!! | TTTTTGTGGTTTAAAATGAT+GGG | - | chr6.2:4948622-4948641 | MS.gene56737:intron | 20.0% |
| !!! | TTTTTTGTGGTTTAAAATGA+TGG | - | chr6.2:4948621-4948640 | MS.gene56737:intron | 20.0% |
| ! | AAATATGAAGGACAACAAAA+AGG | + | chr6.2:4949667-4949686 | None:intergenic | 25.0% |
| ! | AAATGGTTCAAAAAGACTAA+AGG | + | chr6.2:4953747-4953766 | None:intergenic | 25.0% |
| ! | AGAGAGAAATTGAAGTTATT+AGG | + | chr6.2:4951910-4951929 | None:intergenic | 25.0% |
| ! | AGATGTCAAAAAAATGTTTG+TGG | + | chr6.2:4952980-4952999 | None:intergenic | 25.0% |
| ! | CATAATTAAACTCATATGTG+TGG | + | chr6.2:4951121-4951140 | None:intergenic | 25.0% |
| ! | CATATCGTCAAAATAAAGTA+TGG | - | chr6.2:4953168-4953187 | MS.gene56737:intron | 25.0% |
| ! | CCACAAAAACAACAAAAATA+AGG | + | chr6.2:4952376-4952395 | None:intergenic | 25.0% |
| ! | CTAAATGATATTTGCATGAA+AGG | + | chr6.2:4949537-4949556 | None:intergenic | 25.0% |
| ! | CTTTCATGCAAATATCATTT+AGG | - | chr6.2:4949535-4949554 | MS.gene56737:intron | 25.0% |
| ! | GAAAAAAAATGAAACACCTT+TGG | + | chr6.2:4948773-4948792 | None:intergenic | 25.0% |
| ! | GAAAAAAACACAAATGACTT+CGG | - | chr6.2:4952234-4952253 | MS.gene56737:intron | 25.0% |
| ! | GAAATGCAATAAATATTCCA+AGG | - | chr6.2:4952897-4952916 | MS.gene56737:intron | 25.0% |
| ! | GAGAGAAATTGAAGTTATTA+GGG | + | chr6.2:4951909-4951928 | None:intergenic | 25.0% |
| ! | GTGTGTATAATGAAGTTAAA+AGG | + | chr6.2:4951442-4951461 | None:intergenic | 25.0% |
| ! | TATATTACTTTGACCATGTT+TGG | - | chr6.2:4950588-4950607 | MS.gene56737:intron | 25.0% |
| ! | TGTTTATGAACAAAACAGAA+AGG | + | chr6.2:4952087-4952106 | None:intergenic | 25.0% |
| ! | TTATACATAGTAGTCAATAG+CGG | - | chr6.2:4951667-4951686 | MS.gene56737:intron | 25.0% |
| ! | TTTCTGATAGTTAATACTTG+AGG | - | chr6.2:4949945-4949964 | MS.gene56737:intron | 25.0% |
| !! | CATATTGTTGGATATTTTAC+GGG | + | chr6.2:4949906-4949925 | None:intergenic | 25.0% |
| !! | GTTTTGCAAAATTGTAAACA+CGG | + | chr6.2:4953535-4953554 | None:intergenic | 25.0% |
| !! | TAGTCTTTTTGAACCATTTA+GGG | - | chr6.2:4953748-4953767 | MS.gene56737:intron | 25.0% |
| !! | TTGTTGCTTCTACAAATTTA+TGG | + | chr6.2:4950290-4950309 | None:intergenic | 25.0% |
| !! | TTTCAGGTAAAATGAAATAG+CGG | + | chr6.2:4951826-4951845 | None:intergenic | 25.0% |
| !! | TTTTTCATGTCAAATATCAG+TGG | - | chr6.2:4953130-4953149 | MS.gene56737:intron | 25.0% |
| !!! | ATATTTTATTGTAATGGAGC+AGG | + | chr6.2:4949692-4949711 | None:intergenic | 25.0% |
| !!! | ATGTTTTTAATCAGAAGTGT+CGG | + | chr6.2:4948436-4948455 | None:intergenic | 25.0% |
| !!! | CATACTTTATTTTGACGATA+TGG | + | chr6.2:4953170-4953189 | None:intergenic | 25.0% |
| !!! | CCTTATTTTTGTTGTTTTTG+TGG | - | chr6.2:4952373-4952392 | MS.gene56737:intron | 25.0% |
| !!! | GATTTTGTTTTATAATGCCA+AGG | - | chr6.2:4950879-4950898 | MS.gene56737:CDS | 25.0% |
| !!! | TATTTTATTGTAATGGAGCA+GGG | + | chr6.2:4949691-4949710 | None:intergenic | 25.0% |
| !!! | TCATGGTCTAAATAGTTTTA+TGG | - | chr6.2:4953391-4953410 | MS.gene56737:intron | 25.0% |
| !!! | TTAGTCTTTTTGAACCATTT+AGG | - | chr6.2:4953747-4953766 | MS.gene56737:intron | 25.0% |
| AAAAAGCTGAAAACAGCTTA+TGG | - | chr6.2:4950682-4950701 | MS.gene56737:intron | 30.0% | |
| AAAATCTTACTTGAACGGTA+TGG | - | chr6.2:4948707-4948726 | MS.gene56737:intron | 30.0% | |
| AAAGCCAGTATGTATGTATT+TGG | + | chr6.2:4950369-4950388 | None:intergenic | 30.0% | |
| AAATGTGAAATGCTGAACAA+AGG | - | chr6.2:4952798-4952817 | MS.gene56737:intron | 30.0% | |
| AATGTTTGTGGATGCATTAT+AGG | + | chr6.2:4952968-4952987 | None:intergenic | 30.0% | |
| AATTTGAATTGTTCACATGC+AGG | - | chr6.2:4953226-4953245 | MS.gene56737:intron | 30.0% | |
| ACAATCATACAAAAACACAG+AGG | + | chr6.2:4948795-4948814 | None:intergenic | 30.0% | |
| ACTATGTATAACGCTGTTAT+AGG | + | chr6.2:4951658-4951677 | None:intergenic | 30.0% | |
| CAGATATTACTTGACATATG+TGG | + | chr6.2:4953586-4953605 | None:intergenic | 30.0% | |
| CATAAACGCTTCTCATATAA+GGG | - | chr6.2:4950638-4950657 | MS.gene56737:intron | 30.0% | |
| CATGCAAATATCATTTAGGA+TGG | - | chr6.2:4949539-4949558 | MS.gene56737:intron | 30.0% | |
| CATTGAAAACATCAATACCT+CGG | + | chr6.2:4951004-4951023 | None:intergenic | 30.0% | |
| CTTGAATTTACCTTAACAAG+GGG | + | chr6.2:4953500-4953519 | None:intergenic | 30.0% | |
| GCTTGAATTTACCTTAACAA+GGG | + | chr6.2:4953501-4953520 | None:intergenic | 30.0% | |
| GTCATAAAATCACACATGAT+TGG | - | chr6.2:4949036-4949055 | MS.gene56737:intron | 30.0% | |
| TACGTTTATGAACAAAACAG+AGG | + | chr6.2:4952150-4952169 | None:intergenic | 30.0% | |
| TATTTAGTCCAAGAGGAAAA+AGG | - | chr6.2:4949119-4949138 | MS.gene56737:intron | 30.0% | |
| TCCAAAAATATAACCCTAAG+AGG | + | chr6.2:4953724-4953743 | None:intergenic | 30.0% | |
| TGAAAATACAAGTTTGTCCT+TGG | - | chr6.2:4951841-4951860 | MS.gene56737:intron | 30.0% | |
| TGATAATAAGCTCAAAGGAT+TGG | + | chr6.2:4949996-4950015 | None:intergenic | 30.0% | |
| TGCTTCTACAAATTTATGGT+GGG | + | chr6.2:4950286-4950305 | None:intergenic | 30.0% | |
| TGCTTGAATTTACCTTAACA+AGG | + | chr6.2:4953502-4953521 | None:intergenic | 30.0% | |
| TGGTACCTGTAATATATCAA+AGG | + | chr6.2:4950550-4950569 | None:intergenic | 30.0% | |
| TTAAGATGGTATACCCTTAT+AGG | + | chr6.2:4950208-4950227 | None:intergenic | 30.0% | |
| TTGAACTACAGATAACTGAT+AGG | - | chr6.2:4953894-4953913 | MS.gene56737:CDS | 30.0% | |
| TTGCTTCTACAAATTTATGG+TGG | + | chr6.2:4950287-4950306 | None:intergenic | 30.0% | |
| TTTATTTCCAACGACTACAT+AGG | - | chr6.2:4950437-4950456 | MS.gene56737:intron | 30.0% | |
| ! | AAGGACAAACTTGTATTTTC+AGG | + | chr6.2:4951842-4951861 | None:intergenic | 30.0% |
| ! | ATTTTGCAGAATCAGGAAAT+GGG | - | chr6.2:4948666-4948685 | MS.gene56737:intron | 30.0% |
| ! | CGAAGCATTATAACCTATAA+GGG | - | chr6.2:4950192-4950211 | MS.gene56737:intron | 30.0% |
| ! | CGGTGTAAATCAATTTTACA+TGG | - | chr6.2:4949734-4949753 | MS.gene56737:intron | 30.0% |
| ! | CTAAAAACATGGGACATTTT+TGG | + | chr6.2:4953701-4953720 | None:intergenic | 30.0% |
| ! | GATATTTTACGGGTTTAAAG+GGG | + | chr6.2:4949896-4949915 | None:intergenic | 30.0% |
| ! | GATTAAAAAGCATACACTGT+CGG | - | chr6.2:4949714-4949733 | MS.gene56737:intron | 30.0% |
| ! | GCAAAACATGCAAAATTTTG+TGG | - | chr6.2:4953548-4953567 | MS.gene56737:CDS | 30.0% |
| ! | GGATATTTTACGGGTTTAAA+GGG | + | chr6.2:4949897-4949916 | None:intergenic | 30.0% |
| ! | GTTGAATATTTTGCAGAATC+AGG | - | chr6.2:4948659-4948678 | MS.gene56737:intron | 30.0% |
| ! | GTTTGAGTAGTTAGCTTATA+TGG | - | chr6.2:4950073-4950092 | MS.gene56737:intron | 30.0% |
| ! | TATTTTGCAGAATCAGGAAA+TGG | - | chr6.2:4948665-4948684 | MS.gene56737:intron | 30.0% |
| ! | TCAAAACGGTTGATTCTTAT+TGG | - | chr6.2:4949834-4949853 | MS.gene56737:intron | 30.0% |
| ! | TCGAAGCATTATAACCTATA+AGG | - | chr6.2:4950191-4950210 | MS.gene56737:intron | 30.0% |
| ! | TCTAAGATGAGAGACATATA+TGG | - | chr6.2:4949604-4949623 | MS.gene56737:intron | 30.0% |
| ! | TGGATATTTTACGGGTTTAA+AGG | + | chr6.2:4949898-4949917 | None:intergenic | 30.0% |
| !! | ATCCATAAAAGTGCTTCTTT+CGG | + | chr6.2:4952841-4952860 | None:intergenic | 30.0% |
| !! | CGTGACTTTAAAATCAGTTA+CGG | + | chr6.2:4951079-4951098 | None:intergenic | 30.0% |
| !! | GAACTCTCATGTTTTTATCT+AGG | - | chr6.2:4953430-4953449 | MS.gene56737:intron | 30.0% |
| !! | GGTAATCTCATTTTAACACT+TGG | - | chr6.2:4949227-4949246 | MS.gene56737:intron | 30.0% |
| !! | GTATTGATGTTTTCAATGAG+CGG | - | chr6.2:4951006-4951025 | MS.gene56737:intron | 30.0% |
| !! | GTGAAGTTGTTTTACATTGA+CGG | - | chr6.2:4949865-4949884 | MS.gene56737:intron | 30.0% |
| !! | TACGTTGATAATAAGCTCAA+AGG | + | chr6.2:4950001-4950020 | None:intergenic | 30.0% |
| !! | TTAAGTTGTTTCTCCAAACA+TGG | + | chr6.2:4950604-4950623 | None:intergenic | 30.0% |
| !!! | CTTTATTTTGACGATATGGT+TGG | + | chr6.2:4953166-4953185 | None:intergenic | 30.0% |
| !!! | GTAAGTTTCAGTTTTATTCG+AGG | + | chr6.2:4953066-4953085 | None:intergenic | 30.0% |
| !!! | GTGTTTTGTTTTTTTCGATG+TGG | - | chr6.2:4949090-4949109 | MS.gene56737:intron | 30.0% |
| !!! | TGAAGAAAGATGATTGGTTT+TGG | + | chr6.2:4948310-4948329 | None:intergenic | 30.0% |
| !!! | TTCATCATTGCTGATTTTGA+AGG | - | chr6.2:4948576-4948595 | MS.gene56737:intron | 30.0% |
| !!! | TTTGTTTTATAATGCCAAGG+CGG | - | chr6.2:4950882-4950901 | MS.gene56737:CDS | 30.0% |
| AAAACATCTGATACAACCCA+TGG | + | chr6.2:4951307-4951326 | None:intergenic | 35.0% | |
| AACGCCATAGTAGTTAATAG+CGG | + | chr6.2:4952736-4952755 | None:intergenic | 35.0% | |
| AACTACAGATAACTGATAGG+CGG | - | chr6.2:4953897-4953916 | MS.gene56737:CDS | 35.0% | |
| ACAAGCAAACAAGTGTACTA+AGG | + | chr6.2:4950790-4950809 | None:intergenic | 35.0% | |
| ACTTACTTGAAGAAGAGAAG+AGG | + | chr6.2:4948389-4948408 | None:intergenic | 35.0% | |
| AGAAGGTGAAGAAAGATGAT+TGG | + | chr6.2:4948316-4948335 | None:intergenic | 35.0% | |
| AGTCGTTGGAAATAAATGTC+AGG | + | chr6.2:4950433-4950452 | None:intergenic | 35.0% | |
| ATATCTGTAGTCAATAGCAG+TGG | - | chr6.2:4953599-4953618 | MS.gene56737:intron | 35.0% | |
| ATTTCAGAATCACCCTTTGT+TGG | - | chr6.2:4953325-4953344 | MS.gene56737:intron | 35.0% | |
| CCACAAAAGTGATGAAATAG+CGG | - | chr6.2:4952649-4952668 | MS.gene56737:intron | 35.0% | |
| CTATCCGCTATTAACTACTA+TGG | - | chr6.2:4952729-4952748 | MS.gene56737:intron | 35.0% | |
| CTTACTTGAAGAAGAGAAGA+GGG | + | chr6.2:4948388-4948407 | None:intergenic | 35.0% | |
| GACTGAATCATCAATGAATC+CGG | + | chr6.2:4951350-4951369 | None:intergenic | 35.0% | |
| GCATAAACGCTTCTCATATA+AGG | - | chr6.2:4950637-4950656 | MS.gene56737:intron | 35.0% | |
| GTTATAATGCTTCGATGCAA+CGG | + | chr6.2:4950186-4950205 | None:intergenic | 35.0% | |
| TAAGAGATAACACTTGCAAC+TGG | + | chr6.2:4950570-4950589 | None:intergenic | 35.0% | |
| TACGACACATAAATTGCTTC+AGG | - | chr6.2:4949206-4949225 | MS.gene56737:intron | 35.0% | |
| TCATTCATGAGAAAACAGAG+AGG | + | chr6.2:4952212-4952231 | None:intergenic | 35.0% | |
| TCTCATATAAGGGCTTATCA+TGG | - | chr6.2:4950648-4950667 | MS.gene56737:intron | 35.0% | |
| TGCAGCCTTTGATATATTAC+AGG | - | chr6.2:4950542-4950561 | MS.gene56737:intron | 35.0% | |
| TGGATAGATTGCTGTGAAAT+TGG | - | chr6.2:4949300-4949319 | MS.gene56737:intron | 35.0% | |
| TTAGACTTGTATAGTGGTAC+CGG | - | chr6.2:4950943-4950962 | MS.gene56737:CDS | 35.0% | |
| TTAGCATATGTTTGAATGCG+TGG | - | chr6.2:4950229-4950248 | MS.gene56737:intron | 35.0% | |
| TTATAATGCTTCGATGCAAC+GGG | + | chr6.2:4950185-4950204 | None:intergenic | 35.0% | |
| TTATAGGCTATAGCATAGCA+GGG | + | chr6.2:4951642-4951661 | None:intergenic | 35.0% | |
| TTGCATATTTGCAAGAGACT+CGG | + | chr6.2:4952929-4952948 | None:intergenic | 35.0% | |
| TTGCTTGGCAATTTAATCAC+TGG | - | chr6.2:4952498-4952517 | MS.gene56737:intron | 35.0% | |
| TTGGCAATTTAATCACTGGA+AGG | - | chr6.2:4952502-4952521 | MS.gene56737:intron | 35.0% | |
| ! | AATTTATGGTGGGATAGCAT+AGG | + | chr6.2:4950276-4950295 | None:intergenic | 35.0% |
| ! | ATATGCCGAAGTTGATTATG+CGG | - | chr6.2:4953288-4953307 | MS.gene56737:intron | 35.0% |
| ! | ATTTTGTTGAGATGGATCCA+TGG | - | chr6.2:4951287-4951306 | MS.gene56737:CDS | 35.0% |
| ! | CTAAGCTCCTCTAAAAAGTA+AGG | + | chr6.2:4949376-4949395 | None:intergenic | 35.0% |
| ! | CTTTTCTCAATCTTCTCCAA+AGG | - | chr6.2:4948754-4948773 | MS.gene56737:intron | 35.0% |
| ! | GCCTCTTAGGGTTATATTTT+TGG | - | chr6.2:4953720-4953739 | MS.gene56737:intron | 35.0% |
| ! | TATCCCGCTATAGCATTTTT+GGG | - | chr6.2:4952688-4952707 | MS.gene56737:intron | 35.0% |
| ! | TTAGGTGCATTTTGTTGAGA+TGG | - | chr6.2:4951279-4951298 | MS.gene56737:CDS | 35.0% |
| ! | TTTTGTTGAGATGGATCCAT+GGG | - | chr6.2:4951288-4951307 | MS.gene56737:CDS | 35.0% |
| !! | ATAGTGGTTTGTTCGAATTG+CGG | - | chr6.2:4951527-4951546 | MS.gene56737:intron | 35.0% |
| !! | GATCGAATGTTCTAAAGTGT+CGG | - | chr6.2:4949472-4949491 | MS.gene56737:intron | 35.0% |
| !! | TAGTAGTTAATAGCGGATAG+CGG | + | chr6.2:4952729-4952748 | None:intergenic | 35.0% |
| !! | TTGGAAGTGCTAATTCATGA+GGG | - | chr6.2:4949246-4949265 | MS.gene56737:intron | 35.0% |
| !!! | ATGCATGCCTTACTTTTTAG+AGG | - | chr6.2:4949366-4949385 | MS.gene56737:intron | 35.0% |
| !!! | GTTTTTGAGATGAGAAGATG+CGG | + | chr6.2:4951954-4951973 | None:intergenic | 35.0% |
| !!! | TTCCGAAAGAAGCACTTTTA+TGG | - | chr6.2:4952836-4952855 | MS.gene56737:intron | 35.0% |
| AAAAGTTGAGATGCATGCAG+TGG | - | chr6.2:4948948-4948967 | MS.gene56737:CDS | 40.0% | |
| AAAGTAAGGCATGCATTGCT+CGG | + | chr6.2:4949362-4949381 | None:intergenic | 40.0% | |
| AACACTTACAGAACTCAAGC+TGG | + | chr6.2:4953870-4953889 | None:intergenic | 40.0% | |
| AAGGAGAAGCAAAAGACAAG+AGG | - | chr6.2:4949138-4949157 | MS.gene56737:intron | 40.0% | |
| AATCAACTTCGGCATATGGA+GGG | + | chr6.2:4953285-4953304 | None:intergenic | 40.0% | |
| AATTTATGTGTCGTACGAGG+AGG | + | chr6.2:4949201-4949220 | None:intergenic | 40.0% | |
| ACACTTACAGAACTCAAGCT+GGG | + | chr6.2:4953869-4953888 | None:intergenic | 40.0% | |
| ACCCTAAGAGGCTAAAAACA+TGG | + | chr6.2:4953712-4953731 | None:intergenic | 40.0% | |
| ACGACTACATAGGTTATTGG+AGG | - | chr6.2:4950447-4950466 | MS.gene56737:intron | 40.0% | |
| AGAAAACGTGACTAAGCTCA+GGG | + | chr6.2:4949510-4949529 | None:intergenic | 40.0% | |
| AGAAGAGGAAGAAGAGAAGA+AGG | + | chr6.2:4948333-4948352 | None:intergenic | 40.0% | |
| AGAAGCAAAAGACAAGAGGA+GGG | - | chr6.2:4949142-4949161 | MS.gene56737:intron | 40.0% | |
| AGAGAGGAAGAACAAAACAG+AGG | + | chr6.2:4952196-4952215 | None:intergenic | 40.0% | |
| AGAGGAAGAACAAAACAGAG+AGG | + | chr6.2:4952132-4952151 | None:intergenic | 40.0% | |
| AGCAATGTCGAGATTATCAC+CGG | + | chr6.2:4952483-4952502 | None:intergenic | 40.0% | |
| AGCAATTTATGTGTCGTACG+AGG | + | chr6.2:4949204-4949223 | None:intergenic | 40.0% | |
| AGCTGGTTAGACTTGTATAG+TGG | - | chr6.2:4950937-4950956 | MS.gene56737:CDS | 40.0% | |
| AGGGCCAAATACATACATAC+TGG | - | chr6.2:4950362-4950381 | MS.gene56737:intron | 40.0% | |
| AGTGAGTCAAAAGAGAAACG+AGG | + | chr6.2:4953809-4953828 | None:intergenic | 40.0% | |
| ATGGAGCAGGGAAAATATGA+AGG | + | chr6.2:4949679-4949698 | None:intergenic | 40.0% | |
| ATTGACAACACTCAGAGCAA+GGG | + | chr6.2:4951491-4951510 | None:intergenic | 40.0% | |
| CAAGCAGTGTTGTCAAATAG+AGG | + | chr6.2:4952778-4952797 | None:intergenic | 40.0% | |
| CAGAACCGCATAATCAACTT+CGG | + | chr6.2:4953296-4953315 | None:intergenic | 40.0% | |
| CATGTGCTCAAAGTCATAAG+CGG | - | chr6.2:4952456-4952475 | MS.gene56737:intron | 40.0% | |
| CCAACGACTACATAGGTTAT+TGG | - | chr6.2:4950444-4950463 | MS.gene56737:intron | 40.0% | |
| CCAATAACCTATGTAGTCGT+TGG | + | chr6.2:4950447-4950466 | None:intergenic | 40.0% | |
| CCCTAAGAGGCTAAAAACAT+GGG | + | chr6.2:4953711-4953730 | None:intergenic | 40.0% | |
| CTTCTCAAAACCGCATCAAA+CGG | - | chr6.2:4951998-4952017 | MS.gene56737:intron | 40.0% | |
| GAGGATGAACAAAACAGTAG+AGG | + | chr6.2:4952336-4952355 | None:intergenic | 40.0% | |
| GCATAATCAACTTCGGCATA+TGG | + | chr6.2:4953289-4953308 | None:intergenic | 40.0% | |
| GGAGAAGCTAAAACCCTAAA+TGG | + | chr6.2:4953764-4953783 | None:intergenic | 40.0% | |
| GGCAATTTATGGACCAACAT+GGG | - | chr6.2:4953937-4953956 | MS.gene56737:CDS | 40.0% | |
| GGCTTATCATGGAGAGTTTA+TGG | - | chr6.2:4950659-4950678 | MS.gene56737:intron | 40.0% | |
| GTGATAATCTCGACATTGCT+TGG | - | chr6.2:4952483-4952502 | MS.gene56737:intron | 40.0% | |
| GTGCAACTATTTAGTCCAAG+AGG | - | chr6.2:4949112-4949131 | MS.gene56737:intron | 40.0% | |
| GTTATAGGCTATAGCATAGC+AGG | + | chr6.2:4951643-4951662 | None:intergenic | 40.0% | |
| GTTCGAAGAATTTCTCAACG+CGG | + | chr6.2:4951384-4951403 | None:intergenic | 40.0% | |
| TAATCAACTTCGGCATATGG+AGG | + | chr6.2:4953286-4953305 | None:intergenic | 40.0% | |
| TACAACTAACAAGTCGACAC+CGG | + | chr6.2:4948538-4948557 | None:intergenic | 40.0% | |
| TATAGAAGAGAGCAAACCTG+AGG | + | chr6.2:4952058-4952077 | None:intergenic | 40.0% | |
| TATCTCATAACGCTACGCTA+TGG | + | chr6.2:4951754-4951773 | None:intergenic | 40.0% | |
| TGCATATTTGCAAGAGACTC+GGG | + | chr6.2:4952928-4952947 | None:intergenic | 40.0% | |
| TGCTTCAATTCCAACAGAAC+CGG | + | chr6.2:4950965-4950984 | None:intergenic | 40.0% | |
| TGGCAATTTATGGACCAACA+TGG | - | chr6.2:4953936-4953955 | MS.gene56737:CDS | 40.0% | |
| TTGGAGGTAAAGGTAAGAAG+AGG | + | chr6.2:4948348-4948367 | None:intergenic | 40.0% | |
| ! | AAAGTGTCCTTGCCAACAAA+GGG | + | chr6.2:4953340-4953359 | None:intergenic | 40.0% |
| ! | ACTGAGTTGACGTGTCAAAA+CGG | - | chr6.2:4949820-4949839 | MS.gene56737:intron | 40.0% |
| ! | ATCCCGCTATAGCATTTTTG+GGG | - | chr6.2:4952689-4952708 | MS.gene56737:intron | 40.0% |
| ! | CTATCCCGCTATAGCATTTT+TGG | - | chr6.2:4952687-4952706 | MS.gene56737:intron | 40.0% |
| ! | TGTTTTGCGTCCAAACTTAG+AGG | - | chr6.2:4951321-4951340 | MS.gene56737:CDS | 40.0% |
| ! | TTGATTATGCGGTTCTGATG+AGG | - | chr6.2:4953299-4953318 | MS.gene56737:intron | 40.0% |
| ! | TTGCTTCTCCTTTTTCCTCT+TGG | + | chr6.2:4949130-4949149 | None:intergenic | 40.0% |
| ! | TTTTGTGGACAACACAGTCA+TGG | - | chr6.2:4952388-4952407 | MS.gene56737:intron | 40.0% |
| !! | AAAAGTGTCCTTGCCAACAA+AGG | + | chr6.2:4953341-4953360 | None:intergenic | 40.0% |
| !! | CATAAATTGCCAAGAGTGTC+CGG | + | chr6.2:4953928-4953947 | None:intergenic | 40.0% |
| !! | CCGCTATTTCATCACTTTTG+TGG | + | chr6.2:4952652-4952671 | None:intergenic | 40.0% |
| !! | CTATAGAAGCACTATAGCAC+TGG | + | chr6.2:4951557-4951576 | None:intergenic | 40.0% |
| !! | CTTGGAAGTGCTAATTCATG+AGG | - | chr6.2:4949245-4949264 | MS.gene56737:intron | 40.0% |
| !! | TAGTCATTGAAGCACCGAAA+CGG | - | chr6.2:4949393-4949412 | MS.gene56737:intron | 40.0% |
| !! | TAGTGGTTTGTTCGAATTGC+GGG | - | chr6.2:4951528-4951547 | MS.gene56737:intron | 40.0% |
| !!! | CATGGGACATTTTTGGCTTT+TGG | + | chr6.2:4953694-4953713 | None:intergenic | 40.0% |
| !!! | CCCATGTTTTTAGCCTCTTA+GGG | - | chr6.2:4953708-4953727 | MS.gene56737:intron | 40.0% |
| !!! | GTTTTGGTGTTGAGAAGAAG+TGG | + | chr6.2:4948294-4948313 | None:intergenic | 40.0% |
| !!! | TCCCATGTTTTTAGCCTCTT+AGG | - | chr6.2:4953707-4953726 | MS.gene56737:intron | 40.0% |
| AAAACCGCTATGCAGTGTTG+CGG | + | chr6.2:4951792-4951811 | None:intergenic | 45.0% | |
| AAGAGAGCAAACCTGAGGAA+CGG | + | chr6.2:4952053-4952072 | None:intergenic | 45.0% | |
| AAGAGGGTGAGTGAAGAAGA+GGG | + | chr6.2:4948372-4948391 | None:intergenic | 45.0% | |
| AAGTAAGGCATGCATTGCTC+GGG | + | chr6.2:4949361-4949380 | None:intergenic | 45.0% | |
| AATCCGGTCACCTCTAAGTT+TGG | + | chr6.2:4951334-4951353 | None:intergenic | 45.0% | |
| ACCAAGCTTCCATGTCAACA+TGG | - | chr6.2:4950311-4950330 | MS.gene56737:intron | 45.0% | |
| ACCATGTTGACATGGAAGCT+TGG | + | chr6.2:4950315-4950334 | None:intergenic | 45.0% | |
| ACTATGGCGTTATAGCACTG+TGG | - | chr6.2:4952745-4952764 | MS.gene56737:intron | 45.0% | |
| AGAAGAAGTGGTGAGTGTGT+TGG | + | chr6.2:4948282-4948301 | None:intergenic | 45.0% | |
| AGAAGAGGGTTTGGAGGTAA+AGG | + | chr6.2:4948358-4948377 | None:intergenic | 45.0% | |
| AGAATCACCCTTTGTTGGCA+AGG | - | chr6.2:4953330-4953349 | MS.gene56737:intron | 45.0% | |
| AGCGTAGCGTTATGAGATAG+CGG | - | chr6.2:4951755-4951774 | MS.gene56737:CDS | 45.0% | |
| ATCAACTTCGGCATATGGAG+GGG | + | chr6.2:4953284-4953303 | None:intergenic | 45.0% | |
| CAGATAACTGATAGGCGGTT+TGG | - | chr6.2:4953902-4953921 | MS.gene56737:CDS | 45.0% | |
| CCATCATGCAACACCGTATT+TGG | - | chr6.2:4953004-4953023 | MS.gene56737:intron | 45.0% | |
| CGACCCCAAAAATGCTATAG+CGG | + | chr6.2:4952695-4952714 | None:intergenic | 45.0% | |
| CGCGGTATCATGGAAAATAG+TGG | - | chr6.2:4951511-4951530 | MS.gene56737:intron | 45.0% | |
| CGCTATGGCTTATTGCATAG+CGG | + | chr6.2:4951739-4951758 | None:intergenic | 45.0% | |
| CGGACACTCTTGGCAATTTA+TGG | - | chr6.2:4953926-4953945 | MS.gene56737:CDS | 45.0% | |
| CGGTCAAAACCATGTTGACA+TGG | + | chr6.2:4950323-4950342 | None:intergenic | 45.0% | |
| GAACGTGCTGAGCAATTTGT+AGG | - | chr6.2:4951400-4951419 | MS.gene56737:intron | 45.0% | |
| GACCCCAAAAATGCTATAGC+GGG | + | chr6.2:4952694-4952713 | None:intergenic | 45.0% | |
| GAGAAAACGTGACTAAGCTC+AGG | + | chr6.2:4949511-4949530 | None:intergenic | 45.0% | |
| GAGAAGCAAAAGACAAGAGG+AGG | - | chr6.2:4949141-4949160 | MS.gene56737:intron | 45.0% | |
| GATTGACAACACTCAGAGCA+AGG | + | chr6.2:4951492-4951511 | None:intergenic | 45.0% | |
| GCTACTCTCACCAAATAGCA+TGG | - | chr6.2:4950488-4950507 | MS.gene56737:intron | 45.0% | |
| GGAAACAGAGAGCAGAATAG+AGG | + | chr6.2:4952355-4952374 | None:intergenic | 45.0% | |
| GTCAAAAGAGAAACGAGGAG+AGG | + | chr6.2:4953804-4953823 | None:intergenic | 45.0% | |
| TAAACTCTACTCTCAGACGC+AGG | - | chr6.2:4952278-4952297 | MS.gene56737:intron | 45.0% | |
| TACAAGTCTAACCAGCTTCC+AGG | + | chr6.2:4950934-4950953 | None:intergenic | 45.0% | |
| TCAGTGTACTGTGTCCGTTT+CGG | + | chr6.2:4949410-4949429 | None:intergenic | 45.0% | |
| TCGATGCAACGGGTGTTAAA+AGG | + | chr6.2:4950175-4950194 | None:intergenic | 45.0% | |
| TCTGTAGTCAATAGCAGTGG+TGG | - | chr6.2:4953602-4953621 | MS.gene56737:intron | 45.0% | |
| TGATTTATGTACGCGCTGCA+GGG | - | chr6.2:4950343-4950362 | MS.gene56737:intron | 45.0% | |
| TGCAGAATCAGGAAATGGGT+TGG | - | chr6.2:4948670-4948689 | MS.gene56737:intron | 45.0% | |
| TGCAGCGCGTACATAAATCA+CGG | + | chr6.2:4950343-4950362 | None:intergenic | 45.0% | |
| TGTCCCACATCTATCAGTGT+GGG | - | chr6.2:4948462-4948481 | MS.gene56737:intron | 45.0% | |
| TGTTCACATGCAGGAAACAG+TGG | - | chr6.2:4953235-4953254 | MS.gene56737:intron | 45.0% | |
| TGTTGTCAATCGCGGTATCA+TGG | - | chr6.2:4951501-4951520 | MS.gene56737:intron | 45.0% | |
| ! | AACAGATCTGCCGTTTGATG+CGG | + | chr6.2:4952011-4952030 | None:intergenic | 45.0% |
| ! | CTCTTCTTTTGAGCCCATGT+TGG | + | chr6.2:4953953-4953972 | None:intergenic | 45.0% |
| ! | TGTGGACTGAAGATGCAAAG+TGG | + | chr6.2:4951467-4951486 | None:intergenic | 45.0% |
| ! | TTTTATAATGCCAAGGCGGC+TGG | - | chr6.2:4950886-4950905 | MS.gene56737:CDS | 45.0% |
| !! | CCAAATACGGTGTTGCATGA+TGG | + | chr6.2:4953007-4953026 | None:intergenic | 45.0% |
| !! | TATAGTGGTACCGGTTCTGT+TGG | - | chr6.2:4950952-4950971 | MS.gene56737:CDS | 45.0% |
| !!! | CGCTATAGCATTTTTGGGGT+CGG | - | chr6.2:4952693-4952712 | MS.gene56737:intron | 45.0% |
| AACACAGTCATGGCAGCATC+AGG | - | chr6.2:4952398-4952417 | MS.gene56737:intron | 50.0% | |
| AACACTCAGAGCAAGGGATG+TGG | + | chr6.2:4951485-4951504 | None:intergenic | 50.0% | |
| AACGTGACTAAGCTCAGGGT+AGG | + | chr6.2:4949506-4949525 | None:intergenic | 50.0% | |
| AAGAGGAGGGAAACAAGTGC+AGG | - | chr6.2:4949155-4949174 | MS.gene56737:intron | 50.0% | |
| AAGTGGTGAGTGTGTTGGAG+GGG | + | chr6.2:4948277-4948296 | None:intergenic | 50.0% | |
| ACCGACATGCTGGAATCTTG+CGG | - | chr6.2:4953473-4953492 | MS.gene56737:intron | 50.0% | |
| ACCTTTCACGACCTCCATCA+TGG | + | chr6.2:4950523-4950542 | None:intergenic | 50.0% | |
| AGAAGTGGTGAGTGTGTTGG+AGG | + | chr6.2:4948279-4948298 | None:intergenic | 50.0% | |
| AGACTGCTTAGGAGAGCTTG+TGG | + | chr6.2:4950726-4950745 | None:intergenic | 50.0% | |
| AGTCAATAGCGGCGCTATAG+CGG | - | chr6.2:4951678-4951697 | MS.gene56737:intron | 50.0% | |
| AGTGGTGGTTGCTGCAATTG+CGG | - | chr6.2:4953617-4953636 | MS.gene56737:intron | 50.0% | |
| ATCTTGCGGACCCCTTGTTA+AGG | - | chr6.2:4953487-4953506 | MS.gene56737:intron | 50.0% | |
| ATGGCGTTATAGCACTGTGG+CGG | - | chr6.2:4952748-4952767 | MS.gene56737:intron | 50.0% | |
| CACTGATAGATGTGGGACAC+TGG | + | chr6.2:4948461-4948480 | None:intergenic | 50.0% | |
| CCTTTCACGACCTCCATCAT+GGG | + | chr6.2:4950522-4950541 | None:intergenic | 50.0% | |
| CGGACACAGTACACTGACAT+TGG | - | chr6.2:4949413-4949432 | MS.gene56737:intron | 50.0% | |
| CGTCCAAACTTAGAGGTGAC+CGG | - | chr6.2:4951328-4951347 | MS.gene56737:CDS | 50.0% | |
| CTAAGCTCAGGGTAGGAACT+AGG | + | chr6.2:4949499-4949518 | None:intergenic | 50.0% | |
| CTCTCCTAAGCAGTCTCACA+AGG | - | chr6.2:4950730-4950749 | MS.gene56737:intron | 50.0% | |
| CTTTCACGACCTCCATCATG+GGG | + | chr6.2:4950521-4950540 | None:intergenic | 50.0% | |
| GAAATAGCGGTCATAGCGCT+AGG | - | chr6.2:4952662-4952681 | MS.gene56737:intron | 50.0% | |
| GAAGAGGGTGAGTGAAGAAG+AGG | + | chr6.2:4948373-4948392 | None:intergenic | 50.0% | |
| GAAGTGGTGAGTGTGTTGGA+GGG | + | chr6.2:4948278-4948297 | None:intergenic | 50.0% | |
| GAGTCCTTGTGAGACTGCTT+AGG | + | chr6.2:4950737-4950756 | None:intergenic | 50.0% | |
| GAGTGAAGAAGAGGGTTTGG+AGG | + | chr6.2:4948364-4948383 | None:intergenic | 50.0% | |
| GCTCAAAGTCATAAGCGGAC+CGG | - | chr6.2:4952461-4952480 | MS.gene56737:intron | 50.0% | |
| GGGCGTACATCCATGCTATT+TGG | + | chr6.2:4950501-4950520 | None:intergenic | 50.0% | |
| GGTGAGTGAAGAAGAGGGTT+TGG | + | chr6.2:4948367-4948386 | None:intergenic | 50.0% | |
| GTCAGAGCAGATCTGTGTTG+CGG | - | chr6.2:4953660-4953679 | MS.gene56737:intron | 50.0% | |
| GTCCCACATCTATCAGTGTG+GGG | - | chr6.2:4948463-4948482 | MS.gene56737:intron | 50.0% | |
| GTGATTTATGTACGCGCTGC+AGG | - | chr6.2:4950342-4950361 | MS.gene56737:intron | 50.0% | |
| GTGTCCCACATCTATCAGTG+TGG | - | chr6.2:4948461-4948480 | MS.gene56737:intron | 50.0% | |
| TAACCAGCTTCCAGGTCTCA+AGG | + | chr6.2:4950926-4950945 | None:intergenic | 50.0% | |
| TCCGCAAGATTCCAGCATGT+CGG | + | chr6.2:4953477-4953496 | None:intergenic | 50.0% | |
| TCCTTCGAAAACCGACATGC+TGG | - | chr6.2:4953463-4953482 | MS.gene56737:intron | 50.0% | |
| TGCCCCACACTGATAGATGT+GGG | + | chr6.2:4948468-4948487 | None:intergenic | 50.0% | |
| TGGCTTATTGCATAGCGGTC+CGG | + | chr6.2:4951734-4951753 | None:intergenic | 50.0% | |
| ! | ATGAGATAGCGGCGCAATAG+CGG | - | chr6.2:4951766-4951785 | MS.gene56737:CDS | 50.0% |
| ! | GCTCTGAGTGTTGTCAATCG+CGG | - | chr6.2:4951493-4951512 | MS.gene56737:intron | 50.0% |
| ! | GGAATTGAAGCACTTAGCCG+AGG | - | chr6.2:4950973-4950992 | MS.gene56737:intron | 50.0% |
| ! | TAACTGATAGGCGGTTTGGC+CGG | - | chr6.2:4953906-4953925 | MS.gene56737:CDS | 50.0% |
| ! | TCAATACCTCGGAGCATCCT+CGG | + | chr6.2:4950993-4951012 | None:intergenic | 50.0% |
| !!! | TCCAGCATGTCGGTTTTCGA+AGG | + | chr6.2:4953467-4953486 | None:intergenic | 50.0% |
| AAGAGACTCGGGCAGAACCT+TGG | + | chr6.2:4952917-4952936 | None:intergenic | 55.0% | |
| ACAAGTGCAGGATCCACCTG+AGG | - | chr6.2:4949167-4949186 | MS.gene56737:intron | 55.0% | |
| AGAGCAAACCTGAGGAACGG+CGG | + | chr6.2:4952050-4952069 | None:intergenic | 55.0% | |
| AGTCCTGCATCCTTGAGACC+TGG | - | chr6.2:4950913-4950932 | MS.gene56737:CDS | 55.0% | |
| CATCCTTGAGACCTGGAAGC+TGG | - | chr6.2:4950920-4950939 | MS.gene56737:CDS | 55.0% | |
| CATGGATGTACGCCCCATGA+TGG | - | chr6.2:4950506-4950525 | MS.gene56737:intron | 55.0% | |
| CTTCCAGGTCTCAAGGATGC+AGG | + | chr6.2:4950919-4950938 | None:intergenic | 55.0% | |
| GAGGTCGCGAAAGAGAAGTG+AGG | + | chr6.2:4953785-4953804 | None:intergenic | 55.0% | |
| GGCTTATTGCATAGCGGTCC+GGG | + | chr6.2:4951733-4951752 | None:intergenic | 55.0% | |
| GTCATGGCAGCATCAGGTTC+TGG | - | chr6.2:4952404-4952423 | MS.gene56737:intron | 55.0% | |
| GTGCCCCACACTGATAGATG+TGG | + | chr6.2:4948469-4948488 | None:intergenic | 55.0% | |
| TATAATGCCAAGGCGGCTGG+TGG | - | chr6.2:4950889-4950908 | MS.gene56737:CDS | 55.0% | |
| TGTGCGCGCGTGTGTGTTAA+TGG | - | chr6.2:4949280-4949299 | MS.gene56737:intron | 55.0% | |
| TGTGTCGTACGAGGAGGCTT+AGG | + | chr6.2:4949195-4949214 | None:intergenic | 55.0% | |
| ! | CCCATGATGGAGGTCGTGAA+AGG | - | chr6.2:4950519-4950538 | MS.gene56737:intron | 55.0% |
| ACTTAGCCGAGGATGCTCCG+AGG | - | chr6.2:4950984-4951003 | MS.gene56737:intron | 60.0% | |
| CGAGGAGGCTTAGGTTCCTC+AGG | + | chr6.2:4949186-4949205 | None:intergenic | 60.0% | |
| GGAGGCTTAGGTTCCTCAGG+TGG | + | chr6.2:4949183-4949202 | None:intergenic | 60.0% | |
| GGATGTACGCCCCATGATGG+AGG | - | chr6.2:4950509-4950528 | MS.gene56737:intron | 60.0% | |
| GGCGCTATAGCGGCGAATAG+CGG | - | chr6.2:4951688-4951707 | MS.gene56737:intron | 60.0% | |
| CCTGAGGAACGGCGGCTGTA+AGG | + | chr6.2:4952042-4952061 | None:intergenic | 65.0% | |
| CCTTACAGCCGCCGTTCCTC+AGG | - | chr6.2:4952039-4952058 | MS.gene56737:intron | 65.0% | |
| GCGGCCGCAACACTGCATAG+CGG | - | chr6.2:4951785-4951804 | MS.gene56737:CDS | 65.0% | |
| GCTGCAATTGCGGCAGTGCG+TGG | - | chr6.2:4953627-4953646 | MS.gene56737:intron | 65.0% | |
| TGCGGCAGTGCGTGGCACAA+CGG | - | chr6.2:4953635-4953654 | MS.gene56737:intron | 65.0% | |
| ! | GCGGTTTGGCCGGACACTCT+TGG | - | chr6.2:4953916-4953935 | MS.gene56737:CDS | 65.0% |
| ! | TAGCGGATAGCGGCGCGTAG+CGG | + | chr6.2:4952719-4952738 | None:intergenic | 65.0% |
| AGGACTGCCACCAGCCGCCT+TGG | + | chr6.2:4950899-4950918 | None:intergenic | 70.0% | |
| GGCAGTGCGTGGCACAACGG+AGG | - | chr6.2:4953638-4953657 | MS.gene56737:intron | 70.0% | |
| AGCGGCGAATAGCGGCCGCG+CGG | - | chr6.2:4951696-4951715 | MS.gene56737:intron | 75.0% | |
| CGAATAGCGGCCGCGCGGTG+CGG | - | chr6.2:4951701-4951720 | MS.gene56737:intron | 75.0% | |
| ! | AGCGGCCGCGCGGTGCGGTG+CGG | - | chr6.2:4951706-4951725 | MS.gene56737:CDS | 85.0% |
| ! | CGCGCGGTGCGGTGCGGTCC+CGG | - | chr6.2:4951712-4951731 | MS.gene56737:CDS | 85.0% |
| ! | CGGGACCGCACCGCACCGCG+CGG | + | chr6.2:4951714-4951733 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 4948261 | 4954006 | 4948261 | ID=MS.gene56737 |
| chr6.2 | mRNA | 4948261 | 4954006 | 4948261 | ID=MS.gene56737.t1;Parent=MS.gene56737 |
| chr6.2 | exon | 4953865 | 4954006 | 4953865 | ID=MS.gene56737.t1.exon1;Parent=MS.gene56737.t1 |
| chr6.2 | CDS | 4953865 | 4954006 | 4953865 | ID=cds.MS.gene56737.t1;Parent=MS.gene56737.t1 |
| chr6.2 | exon | 4953492 | 4953592 | 4953492 | ID=MS.gene56737.t1.exon2;Parent=MS.gene56737.t1 |
| chr6.2 | CDS | 4953492 | 4953592 | 4953492 | ID=cds.MS.gene56737.t1;Parent=MS.gene56737.t1 |
| chr6.2 | exon | 4953040 | 4953141 | 4953040 | ID=MS.gene56737.t1.exon3;Parent=MS.gene56737.t1 |
| chr6.2 | CDS | 4953040 | 4953141 | 4953040 | ID=cds.MS.gene56737.t1;Parent=MS.gene56737.t1 |
| chr6.2 | exon | 4951704 | 4951808 | 4951704 | ID=MS.gene56737.t1.exon4;Parent=MS.gene56737.t1 |
| chr6.2 | CDS | 4951704 | 4951808 | 4951704 | ID=cds.MS.gene56737.t1;Parent=MS.gene56737.t1 |
| chr6.2 | exon | 4951262 | 4951366 | 4951262 | ID=MS.gene56737.t1.exon5;Parent=MS.gene56737.t1 |
| chr6.2 | CDS | 4951262 | 4951366 | 4951262 | ID=cds.MS.gene56737.t1;Parent=MS.gene56737.t1 |
| chr6.2 | exon | 4950846 | 4950984 | 4950846 | ID=MS.gene56737.t1.exon6;Parent=MS.gene56737.t1 |
| chr6.2 | CDS | 4950846 | 4950984 | 4950846 | ID=cds.MS.gene56737.t1;Parent=MS.gene56737.t1 |
| chr6.2 | exon | 4948904 | 4949019 | 4948904 | ID=MS.gene56737.t1.exon7;Parent=MS.gene56737.t1 |
| chr6.2 | CDS | 4948904 | 4949019 | 4948904 | ID=cds.MS.gene56737.t1;Parent=MS.gene56737.t1 |
| chr6.2 | exon | 4948759 | 4948815 | 4948759 | ID=MS.gene56737.t1.exon8;Parent=MS.gene56737.t1 |
| chr6.2 | CDS | 4948759 | 4948815 | 4948759 | ID=cds.MS.gene56737.t1;Parent=MS.gene56737.t1 |
| chr6.2 | exon | 4948261 | 4948362 | 4948261 | ID=MS.gene56737.t1.exon9;Parent=MS.gene56737.t1 |
| chr6.2 | CDS | 4948261 | 4948362 | 4948261 | ID=cds.MS.gene56737.t1;Parent=MS.gene56737.t1 |
| Gene Sequence |
| Protein sequence |
