Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57949.t1 | RHN64815.1 | 94.5 | 382 | 21 | 0 | 1 | 382 | 29 | 410 | 8.60E-174 | 619.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57949.t1 | Q8W4K5 | 29.8 | 215 | 115 | 9 | 189 | 371 | 273 | 483 | 1.7e-08 | 62.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57949.t1 | G7JEC4 | 94.5 | 382 | 21 | 0 | 1 | 382 | 1 | 382 | 6.2e-174 | 619.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene57949 | -0.83316 | 6.26E-56 | -1.69E-46 |
| MS.gene049320 | MS.gene57949 | -0.807385 | 5.19E-50 | -1.69E-46 |
| MS.gene049611 | MS.gene57949 | 0.838997 | 2.06E-57 | -1.69E-46 |
| MS.gene049634 | MS.gene57949 | 0.809593 | 1.75E-50 | -1.69E-46 |
| MS.gene050216 | MS.gene57949 | -0.851122 | 1.09E-60 | -1.69E-46 |
| MS.gene050323 | MS.gene57949 | -0.810024 | 1.42E-50 | -1.69E-46 |
| MS.gene050381 | MS.gene57949 | 0.819863 | 9.29E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene57949 | -0.818493 | 1.90E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene57949 | -0.823873 | 1.10E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene57949 | -0.832675 | 8.26E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene57949 | -0.831194 | 1.92E-55 | -1.69E-46 |
| MS.gene05079 | MS.gene57949 | 0.807514 | 4.87E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene57949 | -0.832666 | 8.30E-56 | -1.69E-46 |
| MS.gene050871 | MS.gene57949 | -0.836771 | 7.70E-57 | -1.69E-46 |
| MS.gene050986 | MS.gene57949 | -0.815464 | 9.12E-52 | -1.69E-46 |
| MS.gene05104 | MS.gene57949 | 0.860802 | 1.60E-63 | -1.69E-46 |
| MS.gene051127 | MS.gene57949 | 0.835055 | 2.10E-56 | -1.69E-46 |
| MS.gene051138 | MS.gene57949 | 0.811285 | 7.56E-51 | -1.69E-46 |
| MS.gene051268 | MS.gene57949 | -0.81628 | 6.00E-52 | -1.69E-46 |
| MS.gene051509 | MS.gene57949 | -0.809959 | 1.46E-50 | -1.69E-46 |
| MS.gene051863 | MS.gene57949 | 0.817709 | 2.87E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene57949 | -0.807082 | 6.01E-50 | -1.69E-46 |
| MS.gene052805 | MS.gene57949 | 0.806312 | 8.75E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene57949 | -0.81562 | 8.42E-52 | -1.69E-46 |
| MS.gene053018 | MS.gene57949 | -0.801834 | 7.47E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene57949 | 0.837446 | 5.17E-57 | -1.69E-46 |
| MS.gene054054 | MS.gene57949 | 0.80127 | 9.75E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene57949 | -0.805102 | 1.57E-49 | -1.69E-46 |
| MS.gene054707 | MS.gene57949 | 0.809902 | 1.50E-50 | -1.69E-46 |
| MS.gene054708 | MS.gene57949 | 0.822798 | 1.95E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene57949 | -0.812925 | 3.32E-51 | -1.69E-46 |
| MS.gene055124 | MS.gene57949 | 0.83792 | 3.91E-57 | -1.69E-46 |
| MS.gene055202 | MS.gene57949 | 0.808926 | 2.44E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene57949 | -0.800585 | 1.35E-48 | -1.69E-46 |
| MS.gene055577 | MS.gene57949 | -0.800249 | 1.57E-48 | -1.69E-46 |
| MS.gene055776 | MS.gene57949 | -0.809849 | 1.54E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene57949 | -0.801006 | 1.10E-48 | -1.69E-46 |
| MS.gene055942 | MS.gene57949 | 0.805588 | 1.24E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene57949 | -0.831756 | 1.39E-55 | -1.69E-46 |
| MS.gene056510 | MS.gene57949 | -0.807424 | 5.09E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene57949 | -0.80662 | 7.53E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene57949 | 0.807608 | 4.65E-50 | -1.69E-46 |
| MS.gene058068 | MS.gene57949 | 0.808778 | 2.62E-50 | -1.69E-46 |
| MS.gene058093 | MS.gene57949 | 0.808833 | 2.55E-50 | -1.69E-46 |
| MS.gene058099 | MS.gene57949 | 0.827057 | 1.93E-54 | -1.69E-46 |
| MS.gene058108 | MS.gene57949 | 0.801786 | 7.64E-49 | -1.69E-46 |
| MS.gene058109 | MS.gene57949 | 0.80394 | 2.74E-49 | -1.69E-46 |
| MS.gene058117 | MS.gene57949 | 0.80323 | 3.85E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene57949 | -0.808677 | 2.75E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene57949 | 0.848592 | 5.55E-60 | -1.69E-46 |
| MS.gene058173 | MS.gene57949 | 0.838366 | 3.00E-57 | -1.69E-46 |
| MS.gene058175 | MS.gene57949 | 0.848439 | 6.13E-60 | -1.69E-46 |
| MS.gene058269 | MS.gene57949 | 0.811832 | 5.75E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene57949 | -0.800443 | 1.44E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene57949 | -0.832306 | 1.02E-55 | -1.69E-46 |
| MS.gene059037 | MS.gene57949 | 0.831574 | 1.55E-55 | -1.69E-46 |
| MS.gene059045 | MS.gene57949 | 0.812265 | 4.62E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene57949 | -0.821339 | 4.26E-53 | -1.69E-46 |
| MS.gene059699 | MS.gene57949 | 0.81402 | 1.91E-51 | -1.69E-46 |
| MS.gene059701 | MS.gene57949 | 0.80362 | 3.20E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene57949 | 0.817282 | 3.57E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene57949 | -0.850371 | 1.77E-60 | -1.69E-46 |
| MS.gene059943 | MS.gene57949 | 0.834153 | 3.53E-56 | -1.69E-46 |
| MS.gene06000 | MS.gene57949 | -0.801168 | 1.02E-48 | -1.69E-46 |
| MS.gene060482 | MS.gene57949 | -0.824719 | 6.93E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene57949 | -0.833587 | 4.90E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57949.t1 | MTR_4g129510 | 98.168 | 382 | 7 | 0 | 1 | 382 | 1 | 382 | 0.0 | 780 |
| MS.gene57949.t1 | MTR_4g129510 | 97.840 | 324 | 7 | 0 | 59 | 382 | 28 | 351 | 0.0 | 655 |
| MS.gene57949.t1 | MTR_4g129510 | 97.342 | 301 | 8 | 0 | 1 | 301 | 1 | 301 | 0.0 | 601 |
| MS.gene57949.t1 | MTR_3g110182 | 30.570 | 386 | 226 | 13 | 11 | 368 | 34 | 405 | 2.45e-18 | 86.3 |
| MS.gene57949.t1 | MTR_3g110182 | 32.063 | 315 | 183 | 9 | 11 | 305 | 32 | 335 | 4.92e-17 | 82.0 |
| MS.gene57949.t1 | MTR_4g039910 | 33.333 | 225 | 129 | 6 | 114 | 323 | 97 | 315 | 9.78e-14 | 72.0 |
| MS.gene57949.t1 | MTR_7g095500 | 34.507 | 284 | 142 | 9 | 118 | 360 | 175 | 455 | 1.78e-13 | 72.4 |
| MS.gene57949.t1 | MTR_1g102980 | 30.738 | 244 | 136 | 6 | 158 | 371 | 207 | 447 | 7.28e-12 | 67.0 |
| MS.gene57949.t1 | MTR_1g102980 | 30.738 | 244 | 136 | 6 | 158 | 371 | 82 | 322 | 1.63e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57949.t1 | AT5G57770 | 58.250 | 400 | 143 | 11 | 2 | 382 | 9 | 403 | 8.82e-135 | 391 |
| MS.gene57949.t1 | AT5G57770 | 58.104 | 327 | 119 | 9 | 2 | 315 | 9 | 330 | 4.03e-105 | 313 |
| MS.gene57949.t1 | AT3G22810 | 31.515 | 330 | 176 | 9 | 87 | 371 | 1 | 325 | 7.12e-25 | 103 |
| MS.gene57949.t1 | AT3G22810 | 29.243 | 383 | 209 | 12 | 40 | 371 | 92 | 463 | 1.09e-24 | 105 |
| MS.gene57949.t1 | AT3G22810 | 32.797 | 311 | 156 | 8 | 40 | 307 | 92 | 392 | 1.52e-23 | 101 |
| MS.gene57949.t1 | AT4G14740 | 32.550 | 298 | 157 | 7 | 115 | 371 | 174 | 468 | 4.31e-23 | 100 |
| MS.gene57949.t1 | AT4G14740 | 32.550 | 298 | 157 | 7 | 115 | 371 | 174 | 468 | 4.31e-23 | 100 |
| MS.gene57949.t1 | AT4G14740 | 32.881 | 295 | 154 | 7 | 115 | 368 | 35 | 326 | 6.95e-23 | 98.6 |
| MS.gene57949.t1 | AT4G14740 | 36.283 | 226 | 109 | 3 | 115 | 307 | 174 | 397 | 5.70e-20 | 91.3 |
| MS.gene57949.t1 | AT5G47440 | 30.357 | 280 | 166 | 9 | 115 | 370 | 111 | 385 | 1.04e-16 | 81.6 |
| MS.gene57949.t1 | AT5G43870 | 31.436 | 369 | 200 | 13 | 40 | 372 | 96 | 447 | 3.74e-16 | 80.1 |
| MS.gene57949.t1 | AT4G17350 | 28.014 | 282 | 177 | 8 | 115 | 374 | 112 | 389 | 1.60e-15 | 77.8 |
| MS.gene57949.t1 | AT5G43870 | 34.932 | 292 | 151 | 9 | 40 | 305 | 96 | 374 | 1.64e-14 | 74.7 |
| MS.gene57949.t1 | AT4G16670 | 29.965 | 287 | 161 | 10 | 115 | 368 | 129 | 408 | 1.15e-11 | 66.2 |
| MS.gene57949.t1 | AT4G16670 | 31.818 | 220 | 118 | 6 | 115 | 308 | 129 | 342 | 8.77e-11 | 63.2 |
Find 80 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAATAAAGAAATGGTTTA+AGG | 0.192823 | 8.4:+5278741 | MS.gene57949:CDS |
| CTGCTATTGTAATTTAATTC+AGG | 0.195574 | 8.4:-5278558 | None:intergenic |
| TCATATAATTTCAGTAAAAT+TGG | 0.235781 | 8.4:-5280992 | None:intergenic |
| GAGGATCTTAGAAGTGTTAT+TGG | 0.247047 | 8.4:+5278979 | MS.gene57949:CDS |
| GAATGGATGATGCAGATTTC+AGG | 0.263694 | 8.4:+5278187 | MS.gene57949:CDS |
| TGGCTAACTGTAGCATTAAA+AGG | 0.287338 | 8.4:+5279414 | MS.gene57949:intron |
| TAAATTACAATAGCAGTTTA+CGG | 0.296909 | 8.4:+5278565 | MS.gene57949:CDS |
| TACATGTTATCTAATTGTTT+TGG | 0.319327 | 8.4:+5280851 | MS.gene57949:CDS |
| TGGATTTCCTTTCACTTGCT+TGG | 0.326888 | 8.4:+5277926 | MS.gene57949:CDS |
| CTAGGCTCGAATTGTTTGAT+AGG | 0.330134 | 8.4:-5278015 | None:intergenic |
| CAGCTGCAGCAGTGAGAGTT+AGG | 0.331764 | 8.4:-5279035 | None:intergenic |
| TATTGAAGACAACTACGATT+TGG | 0.335481 | 8.4:+5279503 | MS.gene57949:CDS |
| AATAGCCTCTGCTGCTGCTT+TGG | 0.340557 | 8.4:+5278909 | MS.gene57949:CDS |
| AGGATTATAGACACTGTTCT+TGG | 0.349804 | 8.4:-5280406 | None:intergenic |
| TGCTATTGTAATTTAATTCA+GGG | 0.382516 | 8.4:-5278557 | None:intergenic |
| ATTGAAGTCTAATGATCTTA+AGG | 0.384539 | 8.4:+5278221 | MS.gene57949:CDS |
| ACTAGCACTTGTGCCATTCA+TGG | 0.391346 | 8.4:-5279007 | None:intergenic |
| TTGGTGTAACTTTGCTGTAC+AGG | 0.391695 | 8.4:+5277945 | MS.gene57949:CDS |
| CATGCAGCAATGTCCATTGC+AGG | 0.399965 | 8.4:+5278814 | MS.gene57949:CDS |
| AATCTTGAGCATATGATTGA+TGG | 0.426592 | 8.4:-5280943 | None:intergenic |
| TTAAGATCATTAGACTTCAA+TGG | 0.430741 | 8.4:-5278219 | None:intergenic |
| AGTGATCCATGTTGTGGCTC+AGG | 0.434842 | 8.4:-5277976 | None:intergenic |
| ATGCATGCAGAGCTGTATAA+AGG | 0.440766 | 8.4:+5280810 | MS.gene57949:CDS |
| AAATCGTAGTTGTCTTCAAT+AGG | 0.457610 | 8.4:-5279501 | None:intergenic |
| AAAGTATGTCAATAAAGAAA+TGG | 0.463515 | 8.4:+5278734 | MS.gene57949:CDS |
| GGATCAAGGAACAGATTGAA+TGG | 0.466276 | 8.4:+5279462 | MS.gene57949:CDS |
| GGGAAGATTGATTCTTGCAC+AGG | 0.467727 | 8.4:+5279542 | MS.gene57949:CDS |
| TGCAAAAGTAGCTGAATCAA+TGG | 0.476188 | 8.4:+5278945 | MS.gene57949:CDS |
| GGAAGAGCCATGGGGCTACT+AGG | 0.478399 | 8.4:-5278033 | None:intergenic |
| TTGTCTTCAATAGGCAAGAT+GGG | 0.487903 | 8.4:-5279492 | None:intergenic |
| AGTGGTAATATCTGCTTCCA+TGG | 0.499258 | 8.4:-5278709 | None:intergenic |
| GATCAAGGAACAGATTGAAT+GGG | 0.501658 | 8.4:+5279463 | MS.gene57949:CDS |
| ATCTTCGTCGTTACAAGACA+TGG | 0.507918 | 8.4:+5280913 | MS.gene57949:CDS |
| GTTGTCTTCAATAGGCAAGA+TGG | 0.510367 | 8.4:-5279493 | None:intergenic |
| ATCATATCATATAGATGCCA+TGG | 0.511703 | 8.4:+5278692 | MS.gene57949:intron |
| TAGGCTCGAATTGTTTGATA+GGG | 0.514312 | 8.4:-5278014 | None:intergenic |
| GCCACACTTAAAGTAAGATC+AGG | 0.526345 | 8.4:+5279441 | MS.gene57949:CDS |
| TGCTGCTGCAACCCCTGCAA+TGG | 0.526734 | 8.4:-5278827 | None:intergenic |
| AGCTACCAAAGCAGCAGCAG+AGG | 0.532052 | 8.4:-5278914 | None:intergenic |
| TAACCTTAGCTTCACTGTTG+AGG | 0.534080 | 8.4:-5280426 | None:intergenic |
| GACTCAGGATGTGCATCTGA+AGG | 0.534790 | 8.4:-5277901 | None:intergenic |
| TTAAAGTAAGATCAGGATCA+AGG | 0.540160 | 8.4:+5279448 | MS.gene57949:CDS |
| AATCCTCAACAGTGAAGCTA+AGG | 0.541104 | 8.4:+5280423 | MS.gene57949:CDS |
| AGATGCACATCCTGAGTCCA+TGG | 0.541397 | 8.4:+5277906 | MS.gene57949:CDS |
| GTTATTGGCTCAGCCATGAA+TGG | 0.544355 | 8.4:+5278994 | MS.gene57949:CDS |
| TAGATAACATGTATCATCCT+CGG | 0.552626 | 8.4:-5280841 | None:intergenic |
| TCCTGATCTTACTTTAAGTG+TGG | 0.557535 | 8.4:-5279442 | None:intergenic |
| GAGCATATGATTGATGGTTG+TGG | 0.559092 | 8.4:-5280937 | None:intergenic |
| GCAAAAGTAGCTGAATCAAT+GGG | 0.559749 | 8.4:+5278946 | MS.gene57949:CDS |
| CTCACCGTAGGAAGAGCCAT+GGG | 0.559932 | 8.4:-5278042 | None:intergenic |
| TAGCCCCATGGCTCTTCCTA+CGG | 0.560768 | 8.4:+5278038 | MS.gene57949:CDS |
| GTGATCCATGTTGTGGCTCA+GGG | 0.562607 | 8.4:-5277975 | None:intergenic |
| AGTTACACCAAGCAAGTGAA+AGG | 0.575345 | 8.4:-5277933 | None:intergenic |
| AGCAAGTGAAAGGAAATCCA+TGG | 0.584542 | 8.4:-5277923 | None:intergenic |
| GAAAGGAAATCCATGGACTC+AGG | 0.585901 | 8.4:-5277916 | None:intergenic |
| ACTCAGGATGTGCATCTGAA+GGG | 0.587610 | 8.4:-5277900 | None:intergenic |
| ATCAATGGGAGCTAAGAAAG+AGG | 0.593937 | 8.4:+5278960 | MS.gene57949:CDS |
| CTGAACCCTGAGCCACAACA+TGG | 0.595899 | 8.4:+5277970 | MS.gene57949:CDS |
| ATGCAGCAATGTCCATTGCA+GGG | 0.597636 | 8.4:+5278815 | MS.gene57949:CDS |
| CTCAGGATGTGCATCTGAAG+GGG | 0.602490 | 8.4:-5277899 | None:intergenic |
| TGAAGGGGATAGATTAAACT+CGG | 0.616318 | 8.4:-5277884 | None:intergenic |
| ACATAGATTGCAAAGAGCAG+AGG | 0.616604 | 8.4:+5278789 | MS.gene57949:CDS |
| AGAACAAGTGATCCATGTTG+TGG | 0.619287 | 8.4:-5277982 | None:intergenic |
| ATCAAGGAACAGATTGAATG+GGG | 0.619443 | 8.4:+5279464 | MS.gene57949:CDS |
| ACTCACCGTAGGAAGAGCCA+TGG | 0.631267 | 8.4:-5278043 | None:intergenic |
| TGTCTTCAATAGGCAAGATG+GGG | 0.632757 | 8.4:-5279491 | None:intergenic |
| CACTTTCAAGCTAGACATGG+TGG | 0.633111 | 8.4:+5280887 | MS.gene57949:CDS |
| GGAAGATTGATTCTTGCACA+GGG | 0.639974 | 8.4:+5279543 | MS.gene57949:CDS |
| TACAGGTTATACTCATGATG+AGG | 0.654471 | 8.4:+5280649 | MS.gene57949:intron |
| ATTCGAGCCTAGTAGCCCCA+TGG | 0.664825 | 8.4:+5278026 | MS.gene57949:CDS |
| TGCAGCAATGTCCATTGCAG+GGG | 0.667723 | 8.4:+5278816 | MS.gene57949:CDS |
| AGGCACTTTCAAGCTAGACA+TGG | 0.677280 | 8.4:+5280884 | MS.gene57949:CDS |
| GTATAAAGGTTCAGAAACCG+AGG | 0.678370 | 8.4:+5280824 | MS.gene57949:CDS |
| AGATCATTAGACTTCAATGG+AGG | 0.678880 | 8.4:-5278216 | None:intergenic |
| ACAGGGTGCTGAGTTATATG+TGG | 0.679997 | 8.4:+5279560 | MS.gene57949:CDS |
| TTATATGTGGAATCACCAGA+AGG | 0.687221 | 8.4:+5279573 | MS.gene57949:CDS |
| GTCTTCAATAGGCAAGATGG+GGG | 0.690345 | 8.4:-5279490 | None:intergenic |
| TCTTCGTCGTTACAAGACAT+GGG | 0.693504 | 8.4:+5280914 | MS.gene57949:CDS |
| TCAAGGAACAGATTGAATGG+GGG | 0.721493 | 8.4:+5279465 | MS.gene57949:CDS |
| TCACCGTAGGAAGAGCCATG+GGG | 0.748512 | 8.4:-5278041 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAATAATTAAAAGAAAA+GGG | - | chr8.4:5280726-5280745 | None:intergenic | 10.0% |
| !! | TCATAAATAATTAAAAGAAA+AGG | - | chr8.4:5280727-5280746 | None:intergenic | 10.0% |
| !!! | ATAAAAAGTTTATTTTCTAT+TGG | - | chr8.4:5279288-5279307 | None:intergenic | 10.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr8.4:5279735-5279754 | None:intergenic | 15.0% |
| !! | TAGAAAAACATATAATACAT+AGG | - | chr8.4:5280344-5280363 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr8.4:5279736-5279755 | None:intergenic | 15.0% |
| !! | TTAAGTTAAGCTTAATTTAA+CGG | - | chr8.4:5280549-5280568 | None:intergenic | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | chr8.4:5279800-5279819 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr8.4:5279801-5279820 | None:intergenic | 15.0% |
| !!! | TTAATTCTTTATGGTATTTT+TGG | - | chr8.4:5280521-5280540 | None:intergenic | 15.0% |
| !! | AAAGTATGTCAATAAAGAAA+TGG | + | chr8.4:5278734-5278753 | MS.gene57949:CDS | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr8.4:5279776-5279795 | None:intergenic | 20.0% |
| !! | ATCTATATGATATGATATGA+TGG | - | chr8.4:5278688-5278707 | None:intergenic | 20.0% |
| !! | CTATATATGGTTATACTAAT+TGG | - | chr8.4:5280169-5280188 | None:intergenic | 20.0% |
| !! | TAAAGTGGAATATATTGTAT+TGG | - | chr8.4:5279777-5279796 | None:intergenic | 20.0% |
| !! | TAAATTACAATAGCAGTTTA+CGG | + | chr8.4:5278565-5278584 | MS.gene57949:CDS | 20.0% |
| !! | TAACTTAAAAGTCATACAAA+TGG | - | chr8.4:5280258-5280277 | None:intergenic | 20.0% |
| !! | TGCTATTGTAATTTAATTCA+GGG | - | chr8.4:5278560-5278579 | None:intergenic | 20.0% |
| !! | TTTAGTGTAATTATATGTGT+CGG | + | chr8.4:5279161-5279180 | MS.gene57949:intron | 20.0% |
| !!! | AAAAGTTTATTTTCTATTGG+TGG | - | chr8.4:5279285-5279304 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | chr8.4:5279799-5279818 | None:intergenic | 20.0% |
| !!! | ATTTTAATTTTTCTGACCTT+TGG | + | chr8.4:5280605-5280624 | MS.gene57949:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr8.4:5279666-5279685 | None:intergenic | 20.0% |
| !!! | TACATGTTATCTAATTGTTT+TGG | + | chr8.4:5280851-5280870 | MS.gene57949:CDS | 20.0% |
| ! | AATATTGATCAAAAGTGAGT+AGG | - | chr8.4:5278134-5278153 | None:intergenic | 25.0% |
| ! | ACTTCAATTATGTCTTAACA+GGG | + | chr8.4:5280374-5280393 | MS.gene57949:intron | 25.0% |
| ! | ATATGGTTATACTAATTGGA+TGG | - | chr8.4:5280165-5280184 | None:intergenic | 25.0% |
| ! | ATTGAAGTCTAATGATCTTA+AGG | + | chr8.4:5278221-5278240 | MS.gene57949:CDS | 25.0% |
| ! | CTGCTATTGTAATTTAATTC+AGG | - | chr8.4:5278561-5278580 | None:intergenic | 25.0% |
| ! | CTGTTACTGAAAAAAATTGT+TGG | + | chr8.4:5279394-5279413 | MS.gene57949:intron | 25.0% |
| ! | CTTAATAATTCTCCTTCTTT+AGG | - | chr8.4:5280192-5280211 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr8.4:5280023-5280042 | None:intergenic | 25.0% |
| ! | GTCAATAAAGAAATGGTTTA+AGG | + | chr8.4:5278741-5278760 | MS.gene57949:CDS | 25.0% |
| ! | TAATCTACTAAAAAGCAAGA+AGG | + | chr8.4:5280677-5280696 | MS.gene57949:CDS | 25.0% |
| ! | TCCATAATAGATGAAATGAA+TGG | + | chr8.4:5279340-5279359 | MS.gene57949:intron | 25.0% |
| ! | TCCATTCATTTCATCTATTA+TGG | - | chr8.4:5279344-5279363 | None:intergenic | 25.0% |
| ! | TGTATAAATAAAGGGTAAAG+TGG | - | chr8.4:5279792-5279811 | None:intergenic | 25.0% |
| ! | TTAAGATCATTAGACTTCAA+TGG | - | chr8.4:5278222-5278241 | None:intergenic | 25.0% |
| !! | ATATTTTTCACTCAGTTTCA+TGG | + | chr8.4:5278604-5278623 | MS.gene57949:intron | 25.0% |
| !! | GAAAGTCAAACTTTTGTAAT+AGG | + | chr8.4:5280286-5280305 | MS.gene57949:intron | 25.0% |
| !! | GTAGTGGTTGTTATTATTAT+AGG | + | chr8.4:5280774-5280793 | MS.gene57949:intron | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr8.4:5279689-5279708 | None:intergenic | 25.0% |
| !! | TTTATTGACATACTTTTCAG+TGG | - | chr8.4:5278730-5278749 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr8.4:5279667-5279686 | None:intergenic | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+AGG | - | chr8.4:5279688-5279707 | None:intergenic | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr8.4:5279688-5279707 | None:intergenic | 25.0% |
| !!! | TTGGATTTTGACTTTGAAAA+GGG | + | chr8.4:5279522-5279541 | MS.gene57949:CDS | 25.0% |
| !!! | TTTGGATTTTGACTTTGAAA+AGG | + | chr8.4:5279521-5279540 | MS.gene57949:CDS | 25.0% |
| AAATCGTAGTTGTCTTCAAT+AGG | - | chr8.4:5279504-5279523 | None:intergenic | 30.0% | |
| AACAGATTGTACATAGAGTA+CGG | - | chr8.4:5279379-5279398 | None:intergenic | 30.0% | |
| AACCATATATAGCCTAAAGA+AGG | + | chr8.4:5280177-5280196 | MS.gene57949:intron | 30.0% | |
| AATCTTGAGCATATGATTGA+TGG | - | chr8.4:5280946-5280965 | None:intergenic | 30.0% | |
| ACGGTGTCTTTAATTCTTTA+TGG | - | chr8.4:5280530-5280549 | None:intergenic | 30.0% | |
| ATAGCAGTTTACGGAAAAAA+TGG | + | chr8.4:5278574-5278593 | MS.gene57949:CDS | 30.0% | |
| ATCATATCATATAGATGCCA+TGG | + | chr8.4:5278692-5278711 | MS.gene57949:intron | 30.0% | |
| ATGATCTTTACTCAAACTAC+AGG | + | chr8.4:5280632-5280651 | MS.gene57949:intron | 30.0% | |
| ATGATTACATCTTGCTTTAC+TGG | + | chr8.4:5280573-5280592 | MS.gene57949:intron | 30.0% | |
| CAAAGTATGTCAATTATACC+GGG | + | chr8.4:5279836-5279855 | MS.gene57949:intron | 30.0% | |
| CCAAAGTATGTCAATTATAC+CGG | + | chr8.4:5279835-5279854 | MS.gene57949:intron | 30.0% | |
| GACATACTAAACACAAAACA+CGG | + | chr8.4:5278283-5278302 | MS.gene57949:intron | 30.0% | |
| GACTTCAATTATGTCTTAAC+AGG | + | chr8.4:5280373-5280392 | MS.gene57949:intron | 30.0% | |
| GATAATACCCAAAACTATGA+AGG | - | chr8.4:5279217-5279236 | None:intergenic | 30.0% | |
| TAATTACACTAAATCGTGTC+CGG | - | chr8.4:5279154-5279173 | None:intergenic | 30.0% | |
| TAGAATGCACGAATAACTTA+TGG | + | chr8.4:5280752-5280771 | MS.gene57949:intron | 30.0% | |
| TAGATAACATGTATCATCCT+CGG | - | chr8.4:5280844-5280863 | None:intergenic | 30.0% | |
| TAGCAGTTTACGGAAAAAAT+GGG | + | chr8.4:5278575-5278594 | MS.gene57949:CDS | 30.0% | |
| TATTGAAGACAACTACGATT+TGG | + | chr8.4:5279503-5279522 | MS.gene57949:CDS | 30.0% | |
| TGACGCATGAAAATAATTTG+TGG | + | chr8.4:5278322-5278341 | MS.gene57949:intron | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr8.4:5280038-5280057 | None:intergenic | 30.0% | |
| TGTCATAGAACTGAATTAGA+TGG | - | chr8.4:5278267-5278286 | None:intergenic | 30.0% | |
| TTAAAGTAAGATCAGGATCA+AGG | + | chr8.4:5279448-5279467 | MS.gene57949:CDS | 30.0% | |
| !! | AGTTTATTTTCTATTGGTGG+AGG | - | chr8.4:5279282-5279301 | None:intergenic | 30.0% |
| !! | GTTTATTTTCTATTGGTGGA+GGG | - | chr8.4:5279281-5279300 | None:intergenic | 30.0% |
| !! | TATGAAAAAGAGTGCTAGAA+TGG | + | chr8.4:5278170-5278189 | MS.gene57949:intron | 30.0% |
| !!! | ATGTTCTGTTTTTTCAGTCA+TGG | + | chr8.4:5278511-5278530 | MS.gene57949:intron | 30.0% |
| !!! | ATTGTTTTGGCAACAAGAAA+AGG | + | chr8.4:5280864-5280883 | MS.gene57949:CDS | 30.0% |
| !!! | TGTTTTTTCAGTCATGGATA+TGG | + | chr8.4:5278517-5278536 | MS.gene57949:intron | 30.0% |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr8.4:5279653-5279672 | None:intergenic | 35.0% | |
| AGATCATTAGACTTCAATGG+AGG | - | chr8.4:5278219-5278238 | None:intergenic | 35.0% | |
| AGGATTATAGACACTGTTCT+TGG | - | chr8.4:5280409-5280428 | None:intergenic | 35.0% | |
| AGTAAAGATCATTGCTCCAA+AGG | - | chr8.4:5280624-5280643 | None:intergenic | 35.0% | |
| AGTGTAATTATATGTGTCGG+CGG | + | chr8.4:5279164-5279183 | MS.gene57949:intron | 35.0% | |
| ATACCCAAAACTATGAAGGA+CGG | - | chr8.4:5279213-5279232 | None:intergenic | 35.0% | |
| ATCAAGGAACAGATTGAATG+GGG | + | chr8.4:5279464-5279483 | MS.gene57949:CDS | 35.0% | |
| CAAAGTAGGTCAATTATACC+GGG | + | chr8.4:5280082-5280101 | MS.gene57949:intron | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | + | chr8.4:5280081-5280100 | MS.gene57949:intron | 35.0% | |
| CCGGTATAATTGACATACTT+TGG | - | chr8.4:5279838-5279857 | None:intergenic | 35.0% | |
| CTCCTTCTTTAGGCTATATA+TGG | - | chr8.4:5280182-5280201 | None:intergenic | 35.0% | |
| GATCAAGGAACAGATTGAAT+GGG | + | chr8.4:5279463-5279482 | MS.gene57949:CDS | 35.0% | |
| GCAAAAGTAGCTGAATCAAT+GGG | + | chr8.4:5278946-5278965 | MS.gene57949:CDS | 35.0% | |
| TACAGGTTATACTCATGATG+AGG | + | chr8.4:5280649-5280668 | MS.gene57949:intron | 35.0% | |
| TAGGCTCGAATTGTTTGATA+GGG | - | chr8.4:5278017-5278036 | None:intergenic | 35.0% | |
| TCCTGATCTTACTTTAAGTG+TGG | - | chr8.4:5279445-5279464 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | chr8.4:5279822-5279841 | MS.gene57949:intron | 35.0% | |
| TGAAGCTAAGGTTAGGATTA+TGG | + | chr8.4:5280435-5280454 | MS.gene57949:intron | 35.0% | |
| TGAAGGGGATAGATTAAACT+CGG | - | chr8.4:5277887-5277906 | None:intergenic | 35.0% | |
| TGCAAAAGTAGCTGAATCAA+TGG | + | chr8.4:5278945-5278964 | MS.gene57949:CDS | 35.0% | |
| TGGCTAACTGTAGCATTAAA+AGG | + | chr8.4:5279414-5279433 | MS.gene57949:intron | 35.0% | |
| TTATATGTGGAATCACCAGA+AGG | + | chr8.4:5279573-5279592 | MS.gene57949:CDS | 35.0% | |
| TTGATCAAAAGTGAGTAGGT+TGG | - | chr8.4:5278130-5278149 | None:intergenic | 35.0% | |
| TTGTCTTCAATAGGCAAGAT+GGG | - | chr8.4:5279495-5279514 | None:intergenic | 35.0% | |
| TTTAAACTTAGACTCACCGT+AGG | - | chr8.4:5278057-5278076 | None:intergenic | 35.0% | |
| ! | ATACTAATTGGATGGTAGTG+TGG | - | chr8.4:5280157-5280176 | None:intergenic | 35.0% |
| ! | CGACTTTGATTTAGGTGAAT+AGG | + | chr8.4:5280475-5280494 | MS.gene57949:intron | 35.0% |
| !! | ATGTCTGTCGACTTTGATTT+AGG | + | chr8.4:5280467-5280486 | MS.gene57949:intron | 35.0% |
| !! | ATTGCATTGAAAGTACCTTC+TGG | - | chr8.4:5279591-5279610 | None:intergenic | 35.0% |
| !! | GAGGATCTTAGAAGTGTTAT+TGG | + | chr8.4:5278979-5278998 | MS.gene57949:CDS | 35.0% |
| AAATACTACTACTTCCGTCC+CGG | - | chr8.4:5280103-5280122 | None:intergenic | 40.0% | |
| AATCCTCAACAGTGAAGCTA+AGG | + | chr8.4:5280423-5280442 | MS.gene57949:CDS | 40.0% | |
| ACATAGATTGCAAAGAGCAG+AGG | + | chr8.4:5278789-5278808 | MS.gene57949:CDS | 40.0% | |
| AGAACAAGTGATCCATGTTG+TGG | - | chr8.4:5277985-5278004 | None:intergenic | 40.0% | |
| AGCAAGTGAAAGGAAATCCA+TGG | - | chr8.4:5277926-5277945 | None:intergenic | 40.0% | |
| AGTGGTAATATCTGCTTCCA+TGG | - | chr8.4:5278712-5278731 | None:intergenic | 40.0% | |
| AGTTACACCAAGCAAGTGAA+AGG | - | chr8.4:5277936-5277955 | None:intergenic | 40.0% | |
| ATCAATGGGAGCTAAGAAAG+AGG | + | chr8.4:5278960-5278979 | MS.gene57949:CDS | 40.0% | |
| ATCTTCGTCGTTACAAGACA+TGG | + | chr8.4:5280913-5280932 | MS.gene57949:CDS | 40.0% | |
| ATGCATGCAGAGCTGTATAA+AGG | + | chr8.4:5280810-5280829 | MS.gene57949:CDS | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | - | chr8.4:5280084-5280103 | None:intergenic | 40.0% | |
| CTAGGCTCGAATTGTTTGAT+AGG | - | chr8.4:5278018-5278037 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr8.4:5279652-5279671 | None:intergenic | 40.0% | |
| GAATGGATGATGCAGATTTC+AGG | + | chr8.4:5278187-5278206 | MS.gene57949:CDS | 40.0% | |
| GCACGAATAACTTATGGTAG+TGG | + | chr8.4:5280758-5280777 | MS.gene57949:intron | 40.0% | |
| GCCACACTTAAAGTAAGATC+AGG | + | chr8.4:5279441-5279460 | MS.gene57949:CDS | 40.0% | |
| GGATCAAGGAACAGATTGAA+TGG | + | chr8.4:5279462-5279481 | MS.gene57949:CDS | 40.0% | |
| GTATAAAGGTTCAGAAACCG+AGG | + | chr8.4:5280824-5280843 | MS.gene57949:CDS | 40.0% | |
| GTATGTCAATTATACCGGGA+CGG | + | chr8.4:5279840-5279859 | MS.gene57949:intron | 40.0% | |
| GTTGTCTTCAATAGGCAAGA+TGG | - | chr8.4:5279496-5279515 | None:intergenic | 40.0% | |
| TAAACACAAAACACGGACAC+TGG | + | chr8.4:5278290-5278309 | MS.gene57949:intron | 40.0% | |
| TAACCTTAGCTTCACTGTTG+AGG | - | chr8.4:5280429-5280448 | None:intergenic | 40.0% | |
| TCAACAGTGAAGCTAAGGTT+AGG | + | chr8.4:5280428-5280447 | MS.gene57949:intron | 40.0% | |
| TCAAGGAACAGATTGAATGG+GGG | + | chr8.4:5279465-5279484 | MS.gene57949:CDS | 40.0% | |
| TCTTCGTCGTTACAAGACAT+GGG | + | chr8.4:5280914-5280933 | MS.gene57949:CDS | 40.0% | |
| TGGATTTCCTTTCACTTGCT+TGG | + | chr8.4:5277926-5277945 | MS.gene57949:CDS | 40.0% | |
| TGTCTTCAATAGGCAAGATG+GGG | - | chr8.4:5279494-5279513 | None:intergenic | 40.0% | |
| TTTGTGTGTCTGATAAGCGA+CGG | - | chr8.4:5278408-5278427 | None:intergenic | 40.0% | |
| ! | GAGCATATGATTGATGGTTG+TGG | - | chr8.4:5280940-5280959 | None:intergenic | 40.0% |
| ! | GGAAGATTGATTCTTGCACA+GGG | + | chr8.4:5279543-5279562 | MS.gene57949:CDS | 40.0% |
| ! | GTGTAATTATATGTGTCGGC+GGG | + | chr8.4:5279165-5279184 | MS.gene57949:intron | 40.0% |
| ! | TGTCCGTCCTTCATAGTTTT+GGG | + | chr8.4:5279207-5279226 | MS.gene57949:intron | 40.0% |
| ! | TTGGTGTAACTTTGCTGTAC+AGG | + | chr8.4:5277945-5277964 | MS.gene57949:CDS | 40.0% |
| AAGAATTACTACCTCCGTCC+CGG | - | chr8.4:5279857-5279876 | None:intergenic | 45.0% | |
| ACTCAGGATGTGCATCTGAA+GGG | - | chr8.4:5277903-5277922 | None:intergenic | 45.0% | |
| AGGCACTTTCAAGCTAGACA+TGG | + | chr8.4:5280884-5280903 | MS.gene57949:CDS | 45.0% | |
| ATGCAGCAATGTCCATTGCA+GGG | + | chr8.4:5278815-5278834 | MS.gene57949:CDS | 45.0% | |
| CACTTTCAAGCTAGACATGG+TGG | + | chr8.4:5280887-5280906 | MS.gene57949:CDS | 45.0% | |
| GAAAGGAAATCCATGGACTC+AGG | - | chr8.4:5277919-5277938 | None:intergenic | 45.0% | |
| GGACTATGAAGCACGAATAC+GGG | + | chr8.4:5279120-5279139 | MS.gene57949:intron | 45.0% | |
| GGGACTATGAAGCACGAATA+CGG | + | chr8.4:5279119-5279138 | MS.gene57949:intron | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | + | chr8.4:5280086-5280105 | MS.gene57949:intron | 45.0% | |
| GTCTTCAATAGGCAAGATGG+GGG | - | chr8.4:5279493-5279512 | None:intergenic | 45.0% | |
| TATGAAGGACGGACACTCAT+TGG | - | chr8.4:5279202-5279221 | None:intergenic | 45.0% | |
| ! | ACTAGCACTTGTGCCATTCA+TGG | - | chr8.4:5279010-5279029 | None:intergenic | 45.0% |
| ! | GGAGTATGACATTTGGAGCA+GGG | - | chr8.4:5279623-5279642 | None:intergenic | 45.0% |
| ! | GGGAAGATTGATTCTTGCAC+AGG | + | chr8.4:5279542-5279561 | MS.gene57949:CDS | 45.0% |
| ! | GTGTCCGTCCTTCATAGTTT+TGG | + | chr8.4:5279206-5279225 | MS.gene57949:intron | 45.0% |
| !! | ACAGGGTGCTGAGTTATATG+TGG | + | chr8.4:5279560-5279579 | MS.gene57949:CDS | 45.0% |
| !! | GTTATTGGCTCAGCCATGAA+TGG | + | chr8.4:5278994-5279013 | MS.gene57949:CDS | 45.0% |
| !!! | TATTTTTTAAAATTCAATAT+TGG | + | chr8.4:5279314-5279333 | MS.gene57949:intron | 5.0% |
| !!! | TTAATTAATACAATTATTTT+GGG | + | chr8.4:5279099-5279118 | MS.gene57949:intron | 5.0% |
| !!! | TTTAATTAATACAATTATTT+TGG | + | chr8.4:5279098-5279117 | MS.gene57949:intron | 5.0% |
| AACTTATACTCCCTCCGTCC+CGG | + | chr8.4:5279877-5279896 | MS.gene57949:intron | 50.0% | |
| AGATGCACATCCTGAGTCCA+TGG | + | chr8.4:5277906-5277925 | MS.gene57949:CDS | 50.0% | |
| AGTGATCCATGTTGTGGCTC+AGG | - | chr8.4:5277979-5277998 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr8.4:5279648-5279667 | None:intergenic | 50.0% | |
| CATGCAGCAATGTCCATTGC+AGG | + | chr8.4:5278814-5278833 | MS.gene57949:CDS | 50.0% | |
| CTCAGGATGTGCATCTGAAG+GGG | - | chr8.4:5277902-5277921 | None:intergenic | 50.0% | |
| GACTCAGGATGTGCATCTGA+AGG | - | chr8.4:5277904-5277923 | None:intergenic | 50.0% | |
| GTGATCCATGTTGTGGCTCA+GGG | - | chr8.4:5277978-5277997 | None:intergenic | 50.0% | |
| TGCAGCAATGTCCATTGCAG+GGG | + | chr8.4:5278816-5278835 | MS.gene57949:CDS | 50.0% | |
| TGTCAATTATACCGGGACGG+AGG | + | chr8.4:5279843-5279862 | MS.gene57949:intron | 50.0% | |
| ! | AATAGCCTCTGCTGCTGCTT+TGG | + | chr8.4:5278909-5278928 | MS.gene57949:CDS | 50.0% |
| ! | GACGGAGGGAGTATGACATT+TGG | - | chr8.4:5279630-5279649 | None:intergenic | 50.0% |
| ! | GGGAGTATGACATTTGGAGC+AGG | - | chr8.4:5279624-5279643 | None:intergenic | 50.0% |
| ACGAATACGGGCATAGACGC+CGG | + | chr8.4:5279132-5279151 | MS.gene57949:intron | 55.0% | |
| ACTCACCGTAGGAAGAGCCA+TGG | - | chr8.4:5278046-5278065 | None:intergenic | 55.0% | |
| AGCTACCAAAGCAGCAGCAG+AGG | - | chr8.4:5278917-5278936 | None:intergenic | 55.0% | |
| ATGTCATACTCCCTCCGTCC+CGG | + | chr8.4:5279631-5279650 | MS.gene57949:intron | 55.0% | |
| ATTCGAGCCTAGTAGCCCCA+TGG | + | chr8.4:5278026-5278045 | MS.gene57949:CDS | 55.0% | |
| CAGCTGCAGCAGTGAGAGTT+AGG | - | chr8.4:5279038-5279057 | None:intergenic | 55.0% | |
| CTCACCGTAGGAAGAGCCAT+GGG | - | chr8.4:5278045-5278064 | None:intergenic | 55.0% | |
| CTGAACCCTGAGCCACAACA+TGG | + | chr8.4:5277970-5277989 | MS.gene57949:CDS | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr8.4:5279644-5279663 | None:intergenic | 55.0% | |
| TAGCCCCATGGCTCTTCCTA+CGG | + | chr8.4:5278038-5278057 | MS.gene57949:CDS | 55.0% | |
| TCACCGTAGGAAGAGCCATG+GGG | - | chr8.4:5278044-5278063 | None:intergenic | 55.0% | |
| GGAAGAGCCATGGGGCTACT+AGG | - | chr8.4:5278036-5278055 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr8.4:5279645-5279664 | None:intergenic | 60.0% | |
| TGCTGCTGCAACCCCTGCAA+TGG | - | chr8.4:5278830-5278849 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 5277877 | 5281004 | 5277877 | ID=MS.gene57949 |
| chr8.4 | mRNA | 5277877 | 5281004 | 5277877 | ID=MS.gene57949.t1;Parent=MS.gene57949 |
| chr8.4 | exon | 5277877 | 5278059 | 5277877 | ID=MS.gene57949.t1.exon1;Parent=MS.gene57949.t1 |
| chr8.4 | CDS | 5277877 | 5278059 | 5277877 | ID=cds.MS.gene57949.t1;Parent=MS.gene57949.t1 |
| chr8.4 | exon | 5278180 | 5278242 | 5278180 | ID=MS.gene57949.t1.exon2;Parent=MS.gene57949.t1 |
| chr8.4 | CDS | 5278180 | 5278242 | 5278180 | ID=cds.MS.gene57949.t1;Parent=MS.gene57949.t1 |
| chr8.4 | exon | 5278528 | 5278596 | 5278528 | ID=MS.gene57949.t1.exon3;Parent=MS.gene57949.t1 |
| chr8.4 | CDS | 5278528 | 5278596 | 5278528 | ID=cds.MS.gene57949.t1;Parent=MS.gene57949.t1 |
| chr8.4 | exon | 5278706 | 5279063 | 5278706 | ID=MS.gene57949.t1.exon4;Parent=MS.gene57949.t1 |
| chr8.4 | CDS | 5278706 | 5279063 | 5278706 | ID=cds.MS.gene57949.t1;Parent=MS.gene57949.t1 |
| chr8.4 | exon | 5279427 | 5279594 | 5279427 | ID=MS.gene57949.t1.exon5;Parent=MS.gene57949.t1 |
| chr8.4 | CDS | 5279427 | 5279594 | 5279427 | ID=cds.MS.gene57949.t1;Parent=MS.gene57949.t1 |
| chr8.4 | exon | 5280395 | 5280444 | 5280395 | ID=MS.gene57949.t1.exon6;Parent=MS.gene57949.t1 |
| chr8.4 | CDS | 5280395 | 5280444 | 5280395 | ID=cds.MS.gene57949.t1;Parent=MS.gene57949.t1 |
| chr8.4 | exon | 5280654 | 5280702 | 5280654 | ID=MS.gene57949.t1.exon7;Parent=MS.gene57949.t1 |
| chr8.4 | CDS | 5280654 | 5280702 | 5280654 | ID=cds.MS.gene57949.t1;Parent=MS.gene57949.t1 |
| chr8.4 | exon | 5280796 | 5281004 | 5280796 | ID=MS.gene57949.t1.exon8;Parent=MS.gene57949.t1 |
| chr8.4 | CDS | 5280796 | 5281004 | 5280796 | ID=cds.MS.gene57949.t1;Parent=MS.gene57949.t1 |
| Gene Sequence |
| Protein sequence |
