Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59395.t1 | CAA41106.1 | 68.5 | 464 | 0 | 1 | 1 | 464 | 1 | 318 | 2.30E-160 | 575.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59395.t1 | P52575 | 68.3 | 464 | 1 | 1 | 1 | 464 | 1 | 318 | 2.7e-162 | 573.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59395.t1 | G7KEZ1 | 67.9 | 464 | 3 | 1 | 1 | 464 | 1 | 318 | 6.8e-159 | 570.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049147 | MS.gene59395 | 0.803672 | 3.12E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene59395 | 0.809511 | 1.82E-50 | -1.69E-46 |
| MS.gene049634 | MS.gene59395 | 0.813526 | 2.45E-51 | -1.69E-46 |
| MS.gene050095 | MS.gene59395 | 0.808687 | 2.74E-50 | -1.69E-46 |
| MS.gene050216 | MS.gene59395 | -0.803035 | 4.22E-49 | -1.69E-46 |
| MS.gene050380 | MS.gene59395 | 0.850534 | 1.60E-60 | -1.69E-46 |
| MS.gene050381 | MS.gene59395 | 0.872803 | 2.40E-67 | -1.69E-46 |
| MS.gene050883 | MS.gene59395 | 0.805446 | 1.33E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene59395 | 0.811052 | 8.49E-51 | -1.69E-46 |
| MS.gene051127 | MS.gene59395 | 0.833146 | 6.31E-56 | -1.69E-46 |
| MS.gene051385 | MS.gene59395 | 0.801333 | 9.46E-49 | -1.69E-46 |
| MS.gene051632 | MS.gene59395 | 0.802996 | 4.30E-49 | -1.69E-46 |
| MS.gene053319 | MS.gene59395 | 0.807993 | 3.85E-50 | -1.69E-46 |
| MS.gene053406 | MS.gene59395 | 0.81362 | 2.33E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene59395 | 0.827641 | 1.40E-54 | -1.69E-46 |
| MS.gene053488 | MS.gene59395 | 0.830492 | 2.85E-55 | -1.69E-46 |
| MS.gene053561 | MS.gene59395 | 0.824404 | 8.22E-54 | -1.69E-46 |
| MS.gene054290 | MS.gene59395 | 0.813898 | 2.03E-51 | -1.69E-46 |
| MS.gene054708 | MS.gene59395 | 0.812275 | 4.60E-51 | -1.69E-46 |
| MS.gene055124 | MS.gene59395 | 0.910943 | 1.06E-82 | -1.69E-46 |
| MS.gene055154 | MS.gene59395 | 0.842954 | 1.89E-58 | -1.69E-46 |
| MS.gene055202 | MS.gene59395 | 0.827405 | 1.59E-54 | -1.69E-46 |
| MS.gene055240 | MS.gene59395 | 0.802371 | 5.79E-49 | -1.69E-46 |
| MS.gene055959 | MS.gene59395 | 0.865015 | 8.02E-65 | -1.69E-46 |
| MS.gene056310 | MS.gene59395 | 0.835641 | 1.49E-56 | -1.69E-46 |
| MS.gene056311 | MS.gene59395 | 0.810607 | 1.06E-50 | -1.69E-46 |
| MS.gene056313 | MS.gene59395 | 0.879461 | 1.22E-69 | -1.69E-46 |
| MS.gene057544 | MS.gene59395 | 0.802439 | 5.61E-49 | -1.69E-46 |
| MS.gene058093 | MS.gene59395 | 0.867168 | 1.67E-65 | -1.69E-46 |
| MS.gene058099 | MS.gene59395 | 0.855991 | 4.35E-62 | -1.69E-46 |
| MS.gene058108 | MS.gene59395 | 0.869147 | 3.85E-66 | -1.69E-46 |
| MS.gene058109 | MS.gene59395 | 0.855509 | 6.01E-62 | -1.69E-46 |
| MS.gene058170 | MS.gene59395 | 0.813281 | 2.77E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene59395 | 0.875987 | 2.00E-68 | -1.69E-46 |
| MS.gene058173 | MS.gene59395 | 0.871405 | 7.01E-67 | -1.69E-46 |
| MS.gene058174 | MS.gene59395 | 0.819608 | 1.06E-52 | -1.69E-46 |
| MS.gene058175 | MS.gene59395 | 0.877218 | 7.50E-69 | -1.69E-46 |
| MS.gene058176 | MS.gene59395 | 0.867779 | 1.06E-65 | -1.69E-46 |
| MS.gene058179 | MS.gene59395 | 0.881832 | 1.73E-70 | -1.69E-46 |
| MS.gene058180 | MS.gene59395 | 0.876817 | 1.03E-68 | -1.69E-46 |
| MS.gene058840 | MS.gene59395 | 0.84666 | 1.89E-59 | -1.69E-46 |
| MS.gene059037 | MS.gene59395 | 0.905444 | 4.26E-80 | -1.69E-46 |
| MS.gene059038 | MS.gene59395 | 0.859796 | 3.23E-63 | -1.69E-46 |
| MS.gene059044 | MS.gene59395 | 0.871035 | 9.28E-67 | -1.69E-46 |
| MS.gene059045 | MS.gene59395 | 0.868309 | 7.19E-66 | -1.69E-46 |
| MS.gene059223 | MS.gene59395 | 0.806642 | 7.45E-50 | -1.69E-46 |
| MS.gene059690 | MS.gene59395 | 0.800027 | 1.75E-48 | -1.69E-46 |
| MS.gene059694 | MS.gene59395 | 0.8093 | 2.03E-50 | -1.69E-46 |
| MS.gene059697 | MS.gene59395 | 0.826302 | 2.92E-54 | -1.69E-46 |
| MS.gene059943 | MS.gene59395 | 0.803661 | 3.13E-49 | -1.69E-46 |
| MS.gene059944 | MS.gene59395 | 0.821612 | 3.68E-53 | -1.69E-46 |
| MS.gene060808 | MS.gene59395 | 0.801542 | 8.57E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59395.t1 | MTR_5g020800 | 98.485 | 264 | 4 | 0 | 1 | 264 | 1 | 264 | 0.0 | 531 |
| MS.gene59395.t1 | MTR_5g020800 | 97.015 | 201 | 6 | 0 | 264 | 464 | 118 | 318 | 1.85e-141 | 408 |
| MS.gene59395.t1 | MTR_5g020760 | 98.106 | 264 | 5 | 0 | 1 | 264 | 1 | 264 | 0.0 | 530 |
| MS.gene59395.t1 | MTR_5g020760 | 96.517 | 201 | 7 | 0 | 264 | 464 | 118 | 318 | 5.10e-141 | 407 |
| MS.gene59395.t1 | MTR_5g020760 | 98.106 | 264 | 5 | 0 | 1 | 264 | 1 | 264 | 0.0 | 529 |
| MS.gene59395.t1 | MTR_5g020760 | 95.918 | 147 | 6 | 0 | 264 | 410 | 118 | 264 | 1.38e-98 | 297 |
| MS.gene59395.t1 | MTR_5g020740 | 59.328 | 268 | 97 | 3 | 1 | 267 | 1 | 257 | 1.26e-106 | 319 |
| MS.gene59395.t1 | MTR_5g020740 | 62.871 | 202 | 74 | 1 | 264 | 464 | 108 | 309 | 1.17e-87 | 270 |
| MS.gene59395.t1 | MTR_3g111980 | 59.108 | 269 | 97 | 3 | 1 | 267 | 1 | 258 | 4.79e-101 | 305 |
| MS.gene59395.t1 | MTR_3g111980 | 56.863 | 204 | 85 | 2 | 264 | 464 | 107 | 310 | 1.60e-73 | 234 |
| MS.gene59395.t1 | MTR_3g111990 | 56.929 | 267 | 104 | 2 | 1 | 267 | 1 | 256 | 6.16e-100 | 302 |
| MS.gene59395.t1 | MTR_3g111990 | 44.590 | 305 | 141 | 7 | 186 | 464 | 6 | 308 | 5.77e-75 | 238 |
| MS.gene59395.t1 | MTR_3g116840 | 54.231 | 260 | 108 | 2 | 5 | 264 | 9 | 257 | 1.28e-91 | 281 |
| MS.gene59395.t1 | MTR_3g116840 | 55.941 | 202 | 88 | 1 | 264 | 464 | 111 | 312 | 6.69e-74 | 235 |
| MS.gene59395.t1 | MTR_4g070370 | 50.388 | 258 | 117 | 2 | 7 | 264 | 10 | 256 | 9.91e-84 | 261 |
| MS.gene59395.t1 | MTR_4g070370 | 45.960 | 198 | 106 | 1 | 264 | 460 | 110 | 307 | 8.77e-57 | 191 |
| MS.gene59395.t1 | MTR_4g070340 | 49.237 | 262 | 122 | 2 | 6 | 267 | 8 | 258 | 4.63e-79 | 249 |
| MS.gene59395.t1 | MTR_4g070340 | 47.500 | 200 | 104 | 1 | 264 | 462 | 109 | 308 | 1.87e-56 | 190 |
| MS.gene59395.t1 | MTR_4g070340 | 48.092 | 262 | 120 | 3 | 6 | 267 | 8 | 253 | 8.18e-74 | 235 |
| MS.gene59395.t1 | MTR_4g070340 | 39.189 | 296 | 161 | 7 | 186 | 462 | 8 | 303 | 1.70e-56 | 190 |
| MS.gene59395.t1 | MTR_5g027290 | 43.151 | 292 | 143 | 4 | 4 | 289 | 3 | 277 | 5.31e-72 | 230 |
| MS.gene59395.t1 | MTR_5g027290 | 43.069 | 202 | 111 | 3 | 264 | 463 | 111 | 310 | 5.98e-49 | 170 |
| MS.gene59395.t1 | MTR_5g027240 | 42.466 | 292 | 145 | 4 | 4 | 289 | 3 | 277 | 4.06e-71 | 228 |
| MS.gene59395.t1 | MTR_5g027240 | 44.554 | 202 | 108 | 3 | 264 | 463 | 111 | 310 | 1.49e-48 | 169 |
| MS.gene59395.t1 | MTR_4g070360 | 40.959 | 271 | 145 | 3 | 4 | 270 | 3 | 262 | 2.82e-64 | 210 |
| MS.gene59395.t1 | MTR_4g070360 | 41.667 | 204 | 116 | 2 | 264 | 464 | 106 | 309 | 3.67e-52 | 178 |
| MS.gene59395.t1 | MTR_8g071130 | 39.726 | 292 | 153 | 6 | 4 | 289 | 3 | 277 | 3.31e-64 | 210 |
| MS.gene59395.t1 | MTR_8g071130 | 41.463 | 205 | 113 | 4 | 264 | 464 | 111 | 312 | 3.30e-45 | 160 |
| MS.gene59395.t1 | MTR_4g070340 | 50.754 | 199 | 98 | 0 | 69 | 267 | 11 | 209 | 4.76e-63 | 206 |
| MS.gene59395.t1 | MTR_4g070340 | 47.500 | 200 | 104 | 1 | 264 | 462 | 60 | 259 | 1.23e-56 | 189 |
| MS.gene59395.t1 | MTR_3g007970 | 38.406 | 276 | 152 | 4 | 2 | 275 | 3 | 262 | 4.48e-58 | 194 |
| MS.gene59395.t1 | MTR_3g007970 | 30.592 | 304 | 183 | 7 | 185 | 464 | 6 | 305 | 1.10e-38 | 143 |
| MS.gene59395.t1 | MTR_3g008140 | 39.925 | 268 | 143 | 4 | 2 | 267 | 3 | 254 | 5.50e-58 | 194 |
| MS.gene59395.t1 | MTR_3g008140 | 36.318 | 201 | 124 | 3 | 264 | 464 | 108 | 304 | 4.07e-37 | 138 |
| MS.gene59395.t1 | MTR_3g008100 | 39.405 | 269 | 143 | 4 | 2 | 267 | 3 | 254 | 9.50e-58 | 193 |
| MS.gene59395.t1 | MTR_3g008100 | 38.049 | 205 | 116 | 4 | 264 | 464 | 108 | 305 | 1.76e-38 | 142 |
| MS.gene59395.t1 | MTR_1g093720 | 37.308 | 260 | 149 | 3 | 3 | 260 | 12 | 259 | 7.28e-55 | 187 |
| MS.gene59395.t1 | MTR_1g093720 | 31.699 | 306 | 180 | 6 | 186 | 464 | 15 | 318 | 8.20e-42 | 152 |
| MS.gene59395.t1 | MTR_3g008100 | 38.662 | 269 | 138 | 4 | 2 | 267 | 3 | 247 | 6.45e-54 | 183 |
| MS.gene59395.t1 | MTR_3g008100 | 38.049 | 205 | 116 | 4 | 264 | 464 | 101 | 298 | 1.29e-38 | 142 |
| MS.gene59395.t1 | MTR_3g008100 | 37.688 | 199 | 104 | 4 | 2 | 197 | 3 | 184 | 8.08e-36 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59395.t1 | AT1G75290 | 51.943 | 283 | 122 | 4 | 1 | 280 | 1 | 272 | 1.30e-93 | 286 |
| MS.gene59395.t1 | AT1G75290 | 53.202 | 203 | 92 | 2 | 264 | 463 | 108 | 310 | 7.09e-71 | 228 |
| MS.gene59395.t1 | AT1G75290 | 51.943 | 283 | 122 | 4 | 1 | 280 | 28 | 299 | 3.78e-93 | 286 |
| MS.gene59395.t1 | AT1G75290 | 53.202 | 203 | 92 | 2 | 264 | 463 | 135 | 337 | 1.93e-70 | 227 |
| MS.gene59395.t1 | AT1G75280 | 54.074 | 270 | 110 | 4 | 1 | 267 | 1 | 259 | 2.92e-92 | 282 |
| MS.gene59395.t1 | AT1G75280 | 52.970 | 202 | 93 | 1 | 264 | 463 | 108 | 309 | 7.05e-70 | 224 |
| MS.gene59395.t1 | AT4G39230 | 52.190 | 274 | 118 | 3 | 1 | 274 | 1 | 261 | 2.79e-91 | 280 |
| MS.gene59395.t1 | AT4G39230 | 55.941 | 202 | 88 | 1 | 264 | 464 | 107 | 308 | 2.07e-72 | 231 |
| MS.gene59395.t1 | AT1G75300 | 51.064 | 282 | 110 | 4 | 1 | 265 | 1 | 271 | 2.58e-88 | 273 |
| MS.gene59395.t1 | AT1G75300 | 47.005 | 217 | 95 | 3 | 264 | 463 | 108 | 321 | 3.25e-59 | 197 |
| MS.gene59395.t1 | AT1G19540 | 49.242 | 264 | 119 | 4 | 5 | 264 | 3 | 255 | 1.75e-75 | 237 |
| MS.gene59395.t1 | AT1G19540 | 51.678 | 149 | 70 | 1 | 264 | 410 | 107 | 255 | 5.46e-42 | 150 |
| MS.gene59395.t1 | AT1G19540 | 49.242 | 264 | 119 | 4 | 5 | 264 | 3 | 255 | 3.00e-75 | 238 |
| MS.gene59395.t1 | AT1G19540 | 50.000 | 204 | 99 | 2 | 264 | 464 | 107 | 310 | 3.60e-61 | 202 |
| MS.gene59395.t1 | AT1G32100 | 41.007 | 278 | 143 | 5 | 4 | 272 | 9 | 274 | 8.02e-64 | 209 |
| MS.gene59395.t1 | AT1G32100 | 42.079 | 202 | 115 | 2 | 264 | 464 | 117 | 317 | 3.24e-48 | 168 |
| MS.gene59395.t1 | AT4G34540 | 37.879 | 264 | 148 | 1 | 4 | 267 | 7 | 254 | 1.54e-63 | 208 |
| MS.gene59395.t1 | AT4G34540 | 40.594 | 202 | 119 | 1 | 264 | 464 | 105 | 306 | 4.06e-52 | 178 |
| MS.gene59395.t1 | AT4G13660 | 42.164 | 268 | 136 | 4 | 4 | 264 | 9 | 264 | 2.76e-63 | 207 |
| MS.gene59395.t1 | AT4G13660 | 42.574 | 202 | 114 | 2 | 264 | 464 | 117 | 317 | 2.84e-45 | 160 |
| MS.gene59395.t1 | AT4G13660 | 42.164 | 268 | 136 | 4 | 4 | 264 | 9 | 264 | 2.76e-63 | 207 |
| MS.gene59395.t1 | AT4G13660 | 42.574 | 202 | 114 | 2 | 264 | 464 | 117 | 317 | 2.84e-45 | 160 |
Find 102 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGTTATACCATCTGAATT+TGG | 0.154248 | 5.4:+12664573 | MS.gene59395:intron |
| TGCGACAAAGTTGTCATTCT+TGG | 0.166136 | 5.4:+12663381 | MS.gene59395:CDS |
| ATAAGCTCTTCCTTGGTTTC+AGG | 0.170156 | 5.4:-12662765 | None:intergenic |
| AAAGAGCAATGACCTCATTT+TGG | 0.212124 | 5.4:-12663622 | None:intergenic |
| AAAGAGCAATGACCTCATTT+TGG | 0.212124 | 5.4:-12665015 | None:intergenic |
| CGGGACAAAGTTGTCATTCT+TGG | 0.251205 | 5.4:+12664771 | MS.gene59395:CDS |
| ATTGATAATTACCAATCTTT+AGG | 0.253564 | 5.4:+12662786 | MS.gene59395:CDS |
| TTCAGAAGCTTCAATATCTT+TGG | 0.259489 | 5.4:-12665420 | None:intergenic |
| CTTTGTTGCCACGCCTTTAC+CGG | 0.290435 | 5.4:+12663312 | MS.gene59395:CDS |
| CTTTGTTGCCACGCCTTTAC+CGG | 0.290435 | 5.4:+12664702 | MS.gene59395:CDS |
| AAATGAGGTCATTGCTCTTT+GGG | 0.309923 | 5.4:+12663625 | MS.gene59395:CDS |
| AAATGAGGTCATTGCTCTTT+GGG | 0.309923 | 5.4:+12665018 | MS.gene59395:CDS |
| AAAATGAGGTCATTGCTCTT+TGG | 0.317132 | 5.4:+12663624 | MS.gene59395:CDS |
| AAAATGAGGTCATTGCTCTT+TGG | 0.317132 | 5.4:+12665017 | MS.gene59395:CDS |
| TATCATTCACAACAAATAAA+AGG | 0.321793 | 5.4:+12665371 | MS.gene59395:CDS |
| TAGTTATACCATCTGAATTT+GGG | 0.345673 | 5.4:+12664574 | MS.gene59395:intron |
| CTTACGTAACTTGGCTCAAC+TGG | 0.353778 | 5.4:+12663341 | MS.gene59395:CDS |
| CTATTGGAAGACACATAGTT+TGG | 0.363124 | 5.4:+12662652 | MS.gene59395:CDS |
| GGGATCATTTGCTGCTCTAA+TGG | 0.371239 | 5.4:-12663549 | None:intergenic |
| GGGATCATTTGCTGCTCTAA+TGG | 0.371239 | 5.4:-12664942 | None:intergenic |
| TTAGCAGCTGTAATAAGCTT+TGG | 0.390009 | 5.4:-12662741 | None:intergenic |
| CTAGGACCAACAGGAGCTAT+TGG | 0.396755 | 5.4:+12662636 | MS.gene59395:CDS |
| ATTCCCTCATAACTACTTGT+TGG | 0.401011 | 5.4:+12665343 | MS.gene59395:CDS |
| AATGCCAACAAGTAGTTATG+AGG | 0.420203 | 5.4:-12665347 | None:intergenic |
| CGGTTACTTCTTACGTAACT+TGG | 0.420584 | 5.4:+12663332 | MS.gene59395:CDS |
| CGGTTACTTCTTACGTAACT+TGG | 0.420584 | 5.4:+12664722 | MS.gene59395:CDS |
| AGGAAATCCAACATATGCTT+TGG | 0.425743 | 5.4:+12662689 | MS.gene59395:CDS |
| CTTCGGCTTCAATTACTCTT+CGG | 0.426997 | 5.4:-12664662 | None:intergenic |
| ATCCTCATCCTAGGACCAAC+AGG | 0.432495 | 5.4:+12662627 | MS.gene59395:CDS |
| ATTAAAGCAATTAAAGAAGC+TGG | 0.439051 | 5.4:+12663010 | MS.gene59395:CDS |
| TTTGGCTTGTTAACATTGCC+AGG | 0.439374 | 5.4:-12662723 | None:intergenic |
| GTAGAATAACTCCTAAAGAT+TGG | 0.448622 | 5.4:-12662797 | None:intergenic |
| ATTATCAATAAGCTCTTCCT+TGG | 0.453266 | 5.4:-12662772 | None:intergenic |
| CAATAGCTCCTGTTGGTCCT+AGG | 0.454369 | 5.4:-12662635 | None:intergenic |
| TGATCATGAAACTCTTGTTA+AGG | 0.455304 | 5.4:+12662919 | MS.gene59395:CDS |
| TTTCTAACCAAAGCATATGT+TGG | 0.458494 | 5.4:-12662696 | None:intergenic |
| GAAGCTTCAATATCTTTGGC+TGG | 0.462307 | 5.4:-12665416 | None:intergenic |
| TAAAGAAGCTGGAAACGTTA+AGG | 0.465104 | 5.4:+12663021 | MS.gene59395:CDS |
| ACAGCTTTGTTCAATGTGTT+GGG | 0.466334 | 5.4:-12663569 | None:intergenic |
| ACAGCTTTGTTCAATGTGTT+GGG | 0.466334 | 5.4:-12664962 | None:intergenic |
| CAAGTTACGTAAGAAGTAAC+CGG | 0.467564 | 5.4:-12663331 | None:intergenic |
| CAAGTTACGTAAGAAGTAAC+CGG | 0.467564 | 5.4:-12664721 | None:intergenic |
| CTTCAGCCTCAATTACTCTT+CGG | 0.475704 | 5.4:-12663272 | None:intergenic |
| AAAGTTGTCATTCTTGGAGA+TGG | 0.476919 | 5.4:+12663387 | MS.gene59395:CDS |
| AAAGTTGTCATTCTTGGAGA+TGG | 0.476919 | 5.4:+12664777 | MS.gene59395:CDS |
| GACAGCTTTGTTCAATGTGT+TGG | 0.480648 | 5.4:-12663570 | None:intergenic |
| GACAGCTTTGTTCAATGTGT+TGG | 0.480648 | 5.4:-12664963 | None:intergenic |
| TATTGGAAGACACATAGTTT+GGG | 0.481038 | 5.4:+12662653 | MS.gene59395:CDS |
| TAGACTACTAATTGAGGATC+AGG | 0.481816 | 5.4:+12662979 | MS.gene59395:CDS |
| GAAAACAAAATCCTCATCCT+AGG | 0.488477 | 5.4:+12662618 | MS.gene59395:CDS |
| ACGTAAGAAGTAACCGGTAA+AGG | 0.493799 | 5.4:-12663325 | None:intergenic |
| ACGTAAGAAGTAACCGGTAA+AGG | 0.493799 | 5.4:-12664715 | None:intergenic |
| GACATTGTGATCTGTGCTGC+TGG | 0.497025 | 5.4:+12662956 | MS.gene59395:CDS |
| AAATTATTTGACCCAAAATG+AGG | 0.510766 | 5.4:+12663610 | MS.gene59395:CDS |
| AAATTATTTGACCCAAAATG+AGG | 0.510766 | 5.4:+12665003 | MS.gene59395:CDS |
| ATGTCACTGAAGCTGATGTT+GGG | 0.512985 | 5.4:+12663519 | MS.gene59395:CDS |
| GCAGTGGTGTATGTCACATC+AGG | 0.513062 | 5.4:-12665449 | None:intergenic |
| CAAGTTCTCAAGGATATTCA+AGG | 0.519192 | 5.4:+12663695 | MS.gene59395:CDS |
| CAAGTTCTCAAGGATATTCA+AGG | 0.519192 | 5.4:+12665088 | MS.gene59395:CDS |
| CGGTAAAGGCGTGGCAACAA+AGG | 0.521509 | 5.4:-12663311 | None:intergenic |
| CGGTAAAGGCGTGGCAACAA+AGG | 0.521509 | 5.4:-12664701 | None:intergenic |
| CGACACAACTGATCCTCCTC+GGG | 0.523381 | 5.4:+12664752 | MS.gene59395:CDS |
| TGAGAAAACTTATGTTTCAG+AGG | 0.523834 | 5.4:+12663670 | MS.gene59395:CDS |
| TGAGAAAACTTATGTTTCAG+AGG | 0.523834 | 5.4:+12665063 | MS.gene59395:CDS |
| TATGTCACTGAAGCTGATGT+TGG | 0.526438 | 5.4:+12663518 | MS.gene59395:CDS |
| CTCCTGTTGGTCCTAGGATG+AGG | 0.526748 | 5.4:-12662629 | None:intergenic |
| AACTTGTCTAACTGGCTCAA+CGG | 0.536329 | 5.4:-12664619 | None:intergenic |
| AGCTGCTAATCCTGAAACCA+AGG | 0.544614 | 5.4:+12662755 | MS.gene59395:CDS |
| GTTTGGGCAAGTATTAAAGC+AGG | 0.544920 | 5.4:+12662669 | MS.gene59395:CDS |
| GTAAGTGTAAGGAACTCCTT+CGG | 0.556646 | 5.4:-12664679 | None:intergenic |
| CTTGGAGATGGAAATGTGAA+AGG | 0.559099 | 5.4:+12663399 | MS.gene59395:CDS |
| CTTGGAGATGGAAATGTGAA+AGG | 0.559099 | 5.4:+12664789 | MS.gene59395:CDS |
| ACGTCTAGCCCAAATTCAGA+TGG | 0.563905 | 5.4:-12663192 | None:intergenic |
| TGGCAACAAAGGTAAGTGTA+AGG | 0.564377 | 5.4:-12663300 | None:intergenic |
| TGGCAACAAAGGTAAGTGTA+AGG | 0.564377 | 5.4:-12664690 | None:intergenic |
| TCGACACAACTGATCCTCCT+CGG | 0.565344 | 5.4:+12664751 | MS.gene59395:CDS |
| TTCAGAGGAACAAGTTCTCA+AGG | 0.567380 | 5.4:+12663685 | MS.gene59395:CDS |
| TTCAGAGGAACAAGTTCTCA+AGG | 0.567380 | 5.4:+12665078 | MS.gene59395:CDS |
| TGTCTTCCAATAGCTCCTGT+TGG | 0.572016 | 5.4:-12662642 | None:intergenic |
| ATCTGAATTTGGGCTAGACG+TGG | 0.583561 | 5.4:+12663194 | MS.gene59395:CDS |
| TGCTGGTAGACTACTAATTG+AGG | 0.589907 | 5.4:+12662973 | MS.gene59395:CDS |
| ATATGTAACTGAGGCTGATG+TGG | 0.591299 | 5.4:+12664910 | MS.gene59395:CDS |
| ATCTGAATTTGGGCTAGACG+TGG | 0.598000 | 5.4:+12664584 | MS.gene59395:CDS |
| ATGCCAACAAGTAGTTATGA+GGG | 0.605998 | 5.4:-12665346 | None:intergenic |
| CGAAGAGTAATTGAGGCTGA+AGG | 0.609640 | 5.4:+12663273 | MS.gene59395:CDS |
| AAGTATCCGAAGAGTAATTG+AGG | 0.611899 | 5.4:+12663266 | MS.gene59395:CDS |
| ATTCAAATATTCATCAGCAG+TGG | 0.611923 | 5.4:-12665465 | None:intergenic |
| CGTCTAGCCCAAATTCAGAT+GGG | 0.623219 | 5.4:-12663191 | None:intergenic |
| GCTAGACGTGGACCGTCATG+AGG | 0.623228 | 5.4:+12664596 | MS.gene59395:CDS |
| AGAATGACAACTTTGTCGCA+AGG | 0.628506 | 5.4:-12663378 | None:intergenic |
| ACGTCTAGCCCAAATTCAGA+TGG | 0.628586 | 5.4:-12664582 | None:intergenic |
| AGAAGTAACCGGTAAAGGCG+TGG | 0.632726 | 5.4:-12663320 | None:intergenic |
| AGAAGTAACCGGTAAAGGCG+TGG | 0.632726 | 5.4:-12664710 | None:intergenic |
| CTGGCTCAACTGCATCGTGA+CGG | 0.650507 | 5.4:-12663218 | None:intergenic |
| CGAAGAGTAATTGAAGCCGA+AGG | 0.653960 | 5.4:+12664663 | MS.gene59395:CDS |
| TTTGTCGCAAGGAGGATCAG+TGG | 0.659283 | 5.4:-12663367 | None:intergenic |
| TTCAGGAGCATATGTAACTG+AGG | 0.661860 | 5.4:+12664901 | MS.gene59395:intron |
| CTGGCTCAACGGCCTCATGA+CGG | 0.663092 | 5.4:-12664608 | None:intergenic |
| ATGACAACTTTGTCCCGAGG+AGG | 0.669433 | 5.4:-12664765 | None:intergenic |
| AGAATGACAACTTTGTCCCG+AGG | 0.692025 | 5.4:-12664768 | None:intergenic |
| TATGTAACTGAGGCTGATGT+GGG | 0.693471 | 5.4:+12664911 | MS.gene59395:CDS |
| ATGACAACTTTGTCGCAAGG+AGG | 0.704900 | 5.4:-12663375 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTAAAAAAATAGAAATATT+AGG | + | chr5.4:12664465-12664484 | MS.gene59395:intron | 10.0% |
| !! | AAAATAGAAATATTAGGAAT+TGG | + | chr5.4:12664471-12664490 | MS.gene59395:intron | 15.0% |
| !! | AAATAGAAATATTAGGAATT+GGG | + | chr5.4:12664472-12664491 | MS.gene59395:intron | 15.0% |
| !! | TGTAAATTATTACATCAATT+GGG | - | chr5.4:12664222-12664241 | None:intergenic | 15.0% |
| !! | TTGTAAATTATTACATCAAT+TGG | - | chr5.4:12664223-12664242 | None:intergenic | 15.0% |
| !! | ACTTATTTGAACTTATTTAC+TGG | - | chr5.4:12663071-12663090 | None:intergenic | 20.0% |
| !! | TATCAACTATGATTGATTAA+CGG | - | chr5.4:12665158-12665177 | None:intergenic | 20.0% |
| !! | TATCATTCACAACAAATAAA+AGG | + | chr5.4:12665371-12665390 | MS.gene59395:CDS | 20.0% |
| !!! | ATTGATAATTACCAATCTTT+AGG | + | chr5.4:12662786-12662805 | MS.gene59395:CDS | 20.0% |
| !!! | ATTGTTAAGAATTTTTACAC+CGG | + | chr5.4:12663743-12663762 | MS.gene59395:intron | 20.0% |
| !!! | ATTTTGGGTCAAATAATTTT+TGG | - | chr5.4:12663609-12663628 | None:intergenic | 20.0% |
| !!! | TTTTGGGTCAAATAATTTTT+GGG | - | chr5.4:12663608-12663627 | None:intergenic | 20.0% |
| ! | AAATTATTACATCAATTGGG+AGG | - | chr5.4:12664219-12664238 | None:intergenic | 25.0% |
| ! | AAATTATTTGACCCAAAATG+AGG | + | chr5.4:12663610-12663629 | MS.gene59395:CDS | 25.0% |
| ! | AAGCCGTATAAATTATTTGA+CGG | + | chr5.4:12663825-12663844 | MS.gene59395:intron | 25.0% |
| ! | AATTATACCTTACTCATTTC+AGG | + | chr5.4:12664884-12664903 | MS.gene59395:intron | 25.0% |
| ! | AATTATTACATCAATTGGGA+GGG | - | chr5.4:12664218-12664237 | None:intergenic | 25.0% |
| ! | ACACCGTCAAATAATTTATA+CGG | - | chr5.4:12663831-12663850 | None:intergenic | 25.0% |
| ! | ATAACTATCGAAAATATTCG+CGG | - | chr5.4:12664561-12664580 | None:intergenic | 25.0% |
| ! | ATAGTTATACCATCTGAATT+TGG | + | chr5.4:12664573-12664592 | MS.gene59395:intron | 25.0% |
| ! | ATTAAAGCAATTAAAGAAGC+TGG | + | chr5.4:12663010-12663029 | MS.gene59395:CDS | 25.0% |
| ! | TACCATTCACAACAAATAAA+AGG | + | chr5.4:12663986-12664005 | MS.gene59395:intron | 25.0% |
| ! | TAGTTATACCATCTGAATTT+GGG | + | chr5.4:12664574-12664593 | MS.gene59395:intron | 25.0% |
| ! | TATCAACAATGATTGATTAC+CGG | - | chr5.4:12663765-12663784 | None:intergenic | 25.0% |
| !! | AAATTTTTCCCATCTGAATT+TGG | + | chr5.4:12663183-12663202 | MS.gene59395:CDS | 25.0% |
| !! | AATTTTTCCCATCTGAATTT+GGG | + | chr5.4:12663184-12663203 | MS.gene59395:CDS | 25.0% |
| !! | TTTGGGTCAAATAATTTTTG+GGG | - | chr5.4:12663607-12663626 | None:intergenic | 25.0% |
| !!! | GCGTTTAATTATTTTTGAGT+CGG | - | chr5.4:12664362-12664381 | None:intergenic | 25.0% |
| AATGCCAACAAATAGTTATG+AGG | - | chr5.4:12663965-12663984 | None:intergenic | 30.0% | |
| AATTTGTCTAACGAATGCTA+AGG | + | chr5.4:12664104-12664123 | MS.gene59395:intron | 30.0% | |
| ATAAGCTCCTGTGAAAATTA+AGG | - | chr5.4:12663501-12663520 | None:intergenic | 30.0% | |
| ATGCCAACAAATAGTTATGA+GGG | - | chr5.4:12663964-12663983 | None:intergenic | 30.0% | |
| ATTATCAATAAGCTCTTCCT+TGG | - | chr5.4:12662775-12662794 | None:intergenic | 30.0% | |
| ATTCAAATATTCATCAGCAG+TGG | - | chr5.4:12664083-12664102 | None:intergenic | 30.0% | |
| ATTCCCTCATAACTATTTGT+TGG | + | chr5.4:12663958-12663977 | MS.gene59395:intron | 30.0% | |
| CTTAGTAATAACTCCTTTGA+TGG | + | chr5.4:12663106-12663125 | MS.gene59395:intron | 30.0% | |
| GTAGAATAACTCCTAAAGAT+TGG | - | chr5.4:12662800-12662819 | None:intergenic | 30.0% | |
| GTCAAATTAGTCACCATAAT+AGG | + | chr5.4:12664498-12664517 | MS.gene59395:intron | 30.0% | |
| GTTATTACTAAGAGTCTATC+TGG | - | chr5.4:12663098-12663117 | None:intergenic | 30.0% | |
| TATTGGAAGACACATAGTTT+GGG | + | chr5.4:12662653-12662672 | MS.gene59395:CDS | 30.0% | |
| TCTTCAAAAACTTGTCTAAC+TGG | - | chr5.4:12663240-12663259 | None:intergenic | 30.0% | |
| TGAGAAAACTTATGTTTCAG+AGG | + | chr5.4:12663670-12663689 | MS.gene59395:CDS | 30.0% | |
| TGATCATGAAACTCTTGTTA+AGG | + | chr5.4:12662919-12662938 | MS.gene59395:CDS | 30.0% | |
| TTCAGAAGCTTCAATATCTT+TGG | - | chr5.4:12664038-12664057 | None:intergenic | 30.0% | |
| TTTCTAACCAAAGCATATGT+TGG | - | chr5.4:12662699-12662718 | None:intergenic | 30.0% | |
| ! | ACATTTGCCTTAATTTTCAC+AGG | + | chr5.4:12663491-12663510 | MS.gene59395:intron | 30.0% |
| ! | GAGTCAAAGACATATTGATT+AGG | - | chr5.4:12662883-12662902 | None:intergenic | 30.0% |
| !! | AATGACTAGTTTGCCTATTA+TGG | - | chr5.4:12664514-12664533 | None:intergenic | 30.0% |
| !! | AATTTTTGGGGAGTCTAATA+TGG | - | chr5.4:12663595-12663614 | None:intergenic | 30.0% |
| !! | GTGAATTTTTCAGTCCATTT+TGG | - | chr5.4:12664388-12664407 | None:intergenic | 30.0% |
| !!! | CATCACTCTTCTATTTTTTG+TGG | + | chr5.4:12664307-12664326 | MS.gene59395:intron | 30.0% |
| !!! | CTCCTTTTATTTGTTGTGAA+TGG | - | chr5.4:12663991-12664010 | None:intergenic | 30.0% |
| AAAATGAGGTCATTGCTCTT+TGG | + | chr5.4:12663624-12663643 | MS.gene59395:CDS | 35.0% | |
| AAAGTTGTCATTCTTGGAGA+TGG | + | chr5.4:12663387-12663406 | MS.gene59395:CDS | 35.0% | |
| AAATGAGGTCATTGCTCTTT+GGG | + | chr5.4:12663625-12663644 | MS.gene59395:CDS | 35.0% | |
| AAGTATCCGAAGAGTAATTG+AGG | + | chr5.4:12663266-12663285 | MS.gene59395:CDS | 35.0% | |
| AATATGTCTTTGACTCTGCA+GGG | + | chr5.4:12662887-12662906 | MS.gene59395:intron | 35.0% | |
| AATGCCAACAAGTAGTTATG+AGG | - | chr5.4:12665350-12665369 | None:intergenic | 35.0% | |
| AGCACAAATCTAACCATCAA+AGG | - | chr5.4:12663122-12663141 | None:intergenic | 35.0% | |
| AGGAAATCCAACATATGCTT+TGG | + | chr5.4:12662689-12662708 | MS.gene59395:CDS | 35.0% | |
| ATATGCTCCTGAAATGAGTA+AGG | - | chr5.4:12664894-12664913 | None:intergenic | 35.0% | |
| ATGCCAACAAGTAGTTATGA+GGG | - | chr5.4:12665349-12665368 | None:intergenic | 35.0% | |
| ATTATATGCGTCACTGTGAA+GGG | + | chr5.4:12664336-12664355 | MS.gene59395:intron | 35.0% | |
| ATTCCCTCATAACTACTTGT+TGG | + | chr5.4:12665343-12665362 | MS.gene59395:CDS | 35.0% | |
| CAAGTTACGTAAGAAGTAAC+CGG | - | chr5.4:12663334-12663353 | None:intergenic | 35.0% | |
| CAAGTTCTCAAGGATATTCA+AGG | + | chr5.4:12663695-12663714 | MS.gene59395:CDS | 35.0% | |
| CTAGTACTAAAACTGTTGTG+TGG | - | chr5.4:12663437-12663456 | None:intergenic | 35.0% | |
| CTATTGGAAGACACATAGTT+TGG | + | chr5.4:12662652-12662671 | MS.gene59395:CDS | 35.0% | |
| GAAAACAAAATCCTCATCCT+AGG | + | chr5.4:12662618-12662637 | MS.gene59395:CDS | 35.0% | |
| TAAAGAAGCTGGAAACGTTA+AGG | + | chr5.4:12663021-12663040 | MS.gene59395:CDS | 35.0% | |
| TAATTAAACGCACGCCAAAA+TGG | + | chr5.4:12664371-12664390 | MS.gene59395:intron | 35.0% | |
| TAGACTACTAATTGAGGATC+AGG | + | chr5.4:12662979-12662998 | MS.gene59395:CDS | 35.0% | |
| TTAGCAGCTGTAATAAGCTT+TGG | - | chr5.4:12662744-12662763 | None:intergenic | 35.0% | |
| ! | AAAGAGCAATGACCTCATTT+TGG | - | chr5.4:12663625-12663644 | None:intergenic | 35.0% |
| ! | AAGAGCAATGACCTCATTTT+GGG | - | chr5.4:12663624-12663643 | None:intergenic | 35.0% |
| ! | CTCTTTGGGAGAAAAAGATT+GGG | + | chr5.4:12663639-12663658 | MS.gene59395:CDS | 35.0% |
| !! | ACAGCTTTGTTCAATGTGTT+GGG | - | chr5.4:12663572-12663591 | None:intergenic | 35.0% |
| ACGTAAGAAGTAACCGGTAA+AGG | - | chr5.4:12663328-12663347 | None:intergenic | 40.0% | |
| AGAATGACAACTTTGTCGCA+AGG | - | chr5.4:12663381-12663400 | None:intergenic | 40.0% | |
| AGACAAAGATGTGCAAACAG+TGG | - | chr5.4:12664270-12664289 | None:intergenic | 40.0% | |
| ATAAGCTCTTCCTTGGTTTC+AGG | - | chr5.4:12662768-12662787 | None:intergenic | 40.0% | |
| ATACCCGCACAAATATCTGA+CGG | + | chr5.4:12665217-12665236 | MS.gene59395:intron | 40.0% | |
| ATATGTAACTGAGGCTGATG+TGG | + | chr5.4:12664910-12664929 | MS.gene59395:CDS | 40.0% | |
| ATGTCACTGAAGCTGATGTT+GGG | + | chr5.4:12663519-12663538 | MS.gene59395:CDS | 40.0% | |
| CAATATGTCTTTGACTCTGC+AGG | + | chr5.4:12662886-12662905 | MS.gene59395:intron | 40.0% | |
| CATTATATGCGTCACTGTGA+AGG | + | chr5.4:12664335-12664354 | MS.gene59395:intron | 40.0% | |
| CGGTTACTTCTTACGTAACT+TGG | + | chr5.4:12663332-12663351 | MS.gene59395:CDS | 40.0% | |
| CTTCAGCCTCAATTACTCTT+CGG | - | chr5.4:12663275-12663294 | None:intergenic | 40.0% | |
| CTTCGGCTTCAATTACTCTT+CGG | - | chr5.4:12664665-12664684 | None:intergenic | 40.0% | |
| CTTGGAGATGGAAATGTGAA+AGG | + | chr5.4:12663399-12663418 | MS.gene59395:CDS | 40.0% | |
| GAAGCTTCAATATCTTTGGC+TGG | - | chr5.4:12664034-12664053 | None:intergenic | 40.0% | |
| GCTTTGGTTAGAAAAACACC+TGG | + | chr5.4:12662705-12662724 | MS.gene59395:CDS | 40.0% | |
| GTAAGTGTAAGGAACTCCTT+CGG | - | chr5.4:12663292-12663311 | None:intergenic | 40.0% | |
| GTTTGGGCAAGTATTAAAGC+AGG | + | chr5.4:12662669-12662688 | MS.gene59395:CDS | 40.0% | |
| TACACCGTCAGATATTTGTG+CGG | - | chr5.4:12665224-12665243 | None:intergenic | 40.0% | |
| TATGTAACTGAGGCTGATGT+GGG | + | chr5.4:12664911-12664930 | MS.gene59395:CDS | 40.0% | |
| TATGTCACTGAAGCTGATGT+TGG | + | chr5.4:12663518-12663537 | MS.gene59395:CDS | 40.0% | |
| TGCGACAAAGTTGTCATTCT+TGG | + | chr5.4:12663381-12663400 | MS.gene59395:CDS | 40.0% | |
| TGCTGGTAGACTACTAATTG+AGG | + | chr5.4:12662973-12662992 | MS.gene59395:CDS | 40.0% | |
| TGGCAACAAAGGTAAGTGTA+AGG | - | chr5.4:12663303-12663322 | None:intergenic | 40.0% | |
| TTCAGAGGAACAAGTTCTCA+AGG | + | chr5.4:12663685-12663704 | MS.gene59395:CDS | 40.0% | |
| ! | AACTTGTCTAACTGGCTCAA+CGG | - | chr5.4:12663232-12663251 | None:intergenic | 40.0% |
| ! | GCTCTTTGGGAGAAAAAGAT+TGG | + | chr5.4:12663638-12663657 | MS.gene59395:CDS | 40.0% |
| ! | TTCAGGAGCATATGTAACTG+AGG | + | chr5.4:12664901-12664920 | MS.gene59395:intron | 40.0% |
| !! | GACAGCTTTGTTCAATGTGT+TGG | - | chr5.4:12663573-12663592 | None:intergenic | 40.0% |
| !! | TTTGGCTTGTTAACATTGCC+AGG | - | chr5.4:12662726-12662745 | None:intergenic | 40.0% |
| ACACCGTCAGATATTTGTGC+GGG | - | chr5.4:12665223-12665242 | None:intergenic | 45.0% | |
| ACGTCTAGCCCAAATTCAGA+TGG | - | chr5.4:12663195-12663214 | None:intergenic | 45.0% | |
| AGAATGACAACTTTGTCCCG+AGG | - | chr5.4:12664771-12664790 | None:intergenic | 45.0% | |
| AGCTGCTAATCCTGAAACCA+AGG | + | chr5.4:12662755-12662774 | MS.gene59395:CDS | 45.0% | |
| ATGACAACTTTGTCGCAAGG+AGG | - | chr5.4:12663378-12663397 | None:intergenic | 45.0% | |
| CGAAGAGTAATTGAAGCCGA+AGG | + | chr5.4:12664663-12664682 | MS.gene59395:CDS | 45.0% | |
| CGAAGAGTAATTGAGGCTGA+AGG | + | chr5.4:12663273-12663292 | MS.gene59395:CDS | 45.0% | |
| CGGGACAAAGTTGTCATTCT+TGG | + | chr5.4:12664771-12664790 | MS.gene59395:CDS | 45.0% | |
| CGTCTAGCCCAAATTCAGAT+GGG | - | chr5.4:12663194-12663213 | None:intergenic | 45.0% | |
| CTTACGTAACTTGGCTCAAC+TGG | + | chr5.4:12663341-12663360 | MS.gene59395:CDS | 45.0% | |
| GGTGTATGTCACATCTGGAT+AGG | - | chr5.4:12664062-12664081 | None:intergenic | 45.0% | |
| TGTCTTCCAATAGCTCCTGT+TGG | - | chr5.4:12662645-12662664 | None:intergenic | 45.0% | |
| ! | ATCTGAATTTGGGCTAGACG+TGG | + | chr5.4:12663194-12663213 | MS.gene59395:CDS | 45.0% |
| ! | GGGATCATTTGCTGCTCTAA+TGG | - | chr5.4:12663552-12663571 | None:intergenic | 45.0% |
| AGAAGTAACCGGTAAAGGCG+TGG | - | chr5.4:12663323-12663342 | None:intergenic | 50.0% | |
| ATCCTCATCCTAGGACCAAC+AGG | + | chr5.4:12662627-12662646 | MS.gene59395:CDS | 50.0% | |
| ATGACAACTTTGTCCCGAGG+AGG | - | chr5.4:12664768-12664787 | None:intergenic | 50.0% | |
| CAATAGCTCCTGTTGGTCCT+AGG | - | chr5.4:12662638-12662657 | None:intergenic | 50.0% | |
| CTAGGACCAACAGGAGCTAT+TGG | + | chr5.4:12662636-12662655 | MS.gene59395:CDS | 50.0% | |
| CTTTGTTGCCACGCCTTTAC+CGG | + | chr5.4:12663312-12663331 | MS.gene59395:CDS | 50.0% | |
| GACATTGTGATCTGTGCTGC+TGG | + | chr5.4:12662956-12662975 | MS.gene59395:CDS | 50.0% | |
| GCAGTGGTGTATGTCACATC+AGG | - | chr5.4:12664067-12664086 | None:intergenic | 50.0% | |
| GCAGTGGTGTATGTCACATC+TGG | - | chr5.4:12664067-12664086 | None:intergenic | 50.0% | |
| TCGACACAACTGATCCTCCT+CGG | + | chr5.4:12664751-12664770 | MS.gene59395:CDS | 50.0% | |
| TTTGTCGCAAGGAGGATCAG+TGG | - | chr5.4:12663370-12663389 | None:intergenic | 50.0% | |
| CGACACAACTGATCCTCCTC+GGG | + | chr5.4:12664752-12664771 | MS.gene59395:CDS | 55.0% | |
| CTCCTGTTGGTCCTAGGATG+AGG | - | chr5.4:12662632-12662651 | None:intergenic | 55.0% | |
| CTGGCTCAACTGCATCGTGA+CGG | - | chr5.4:12663221-12663240 | None:intergenic | 55.0% | |
| ! | CGGTAAAGGCGTGGCAACAA+AGG | - | chr5.4:12663314-12663333 | None:intergenic | 55.0% |
| CTGGCTCAACGGCCTCATGA+CGG | - | chr5.4:12664611-12664630 | None:intergenic | 60.0% | |
| GCTAGACGTGGACCGTCATG+AGG | + | chr5.4:12664596-12664615 | MS.gene59395:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 12662609 | 12665499 | 12662609 | ID=MS.gene59395 |
| chr5.4 | mRNA | 12662609 | 12665499 | 12662609 | ID=MS.gene59395.t1;Parent=MS.gene59395 |
| chr5.4 | exon | 12662609 | 12662824 | 12662609 | ID=MS.gene59395.t1.exon1;Parent=MS.gene59395.t1 |
| chr5.4 | CDS | 12662609 | 12662824 | 12662609 | ID=cds.MS.gene59395.t1;Parent=MS.gene59395.t1 |
| chr5.4 | exon | 12662908 | 12663042 | 12662908 | ID=MS.gene59395.t1.exon2;Parent=MS.gene59395.t1 |
| chr5.4 | CDS | 12662908 | 12663042 | 12662908 | ID=cds.MS.gene59395.t1;Parent=MS.gene59395.t1 |
| chr5.4 | exon | 12663183 | 12663420 | 12663183 | ID=MS.gene59395.t1.exon3;Parent=MS.gene59395.t1 |
| chr5.4 | CDS | 12663183 | 12663420 | 12663183 | ID=cds.MS.gene59395.t1;Parent=MS.gene59395.t1 |
| chr5.4 | exon | 12663513 | 12663716 | 12663513 | ID=MS.gene59395.t1.exon4;Parent=MS.gene59395.t1 |
| chr5.4 | CDS | 12663513 | 12663716 | 12663513 | ID=cds.MS.gene59395.t1;Parent=MS.gene59395.t1 |
| chr5.4 | exon | 12664577 | 12664810 | 12664577 | ID=MS.gene59395.t1.exon5;Parent=MS.gene59395.t1 |
| chr5.4 | CDS | 12664577 | 12664810 | 12664577 | ID=cds.MS.gene59395.t1;Parent=MS.gene59395.t1 |
| chr5.4 | exon | 12664906 | 12665109 | 12664906 | ID=MS.gene59395.t1.exon6;Parent=MS.gene59395.t1 |
| chr5.4 | CDS | 12664906 | 12665109 | 12664906 | ID=cds.MS.gene59395.t1;Parent=MS.gene59395.t1 |
| chr5.4 | exon | 12665336 | 12665499 | 12665336 | ID=MS.gene59395.t1.exon7;Parent=MS.gene59395.t1 |
| chr5.4 | CDS | 12665336 | 12665499 | 12665336 | ID=cds.MS.gene59395.t1;Parent=MS.gene59395.t1 |
| Gene Sequence |
| Protein sequence |
