Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61133.t1 | XP_003607149.1 | 98.3 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 2.20E-200 | 708 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61133.t1 | Q6K508 | 25.8 | 380 | 207 | 8 | 48 | 354 | 85 | 462 | 8.5e-31 | 136.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61133.t1 | A0A072UK26 | 98.3 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 1.6e-200 | 708.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene61133 | 0.82322 | 1.56E-53 | -1.69E-46 |
| MS.gene049341 | MS.gene61133 | 0.820992 | 5.12E-53 | -1.69E-46 |
| MS.gene049404 | MS.gene61133 | 0.827471 | 1.54E-54 | -1.69E-46 |
| MS.gene050020 | MS.gene61133 | 0.825162 | 5.45E-54 | -1.69E-46 |
| MS.gene05016 | MS.gene61133 | 0.821542 | 3.82E-53 | -1.69E-46 |
| MS.gene050273 | MS.gene61133 | 0.813699 | 2.24E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene61133 | 0.821189 | 4.61E-53 | -1.69E-46 |
| MS.gene050561 | MS.gene61133 | 0.820143 | 8.01E-53 | -1.69E-46 |
| MS.gene050562 | MS.gene61133 | 0.810614 | 1.06E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene61133 | 0.85214 | 5.61E-61 | -1.69E-46 |
| MS.gene050808 | MS.gene61133 | 0.822028 | 2.95E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene61133 | 0.808826 | 2.56E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene61133 | 0.828042 | 1.12E-54 | -1.69E-46 |
| MS.gene051719 | MS.gene61133 | 0.835073 | 2.08E-56 | -1.69E-46 |
| MS.gene051720 | MS.gene61133 | 0.832423 | 9.54E-56 | -1.69E-46 |
| MS.gene052239 | MS.gene61133 | -0.818711 | 1.70E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene61133 | 0.826434 | 2.72E-54 | -1.69E-46 |
| MS.gene052611 | MS.gene61133 | 0.812564 | 3.98E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene61133 | 0.829898 | 3.98E-55 | -1.69E-46 |
| MS.gene052879 | MS.gene61133 | 0.803153 | 3.99E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene61133 | 0.80427 | 2.34E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene61133 | 0.809498 | 1.84E-50 | -1.69E-46 |
| MS.gene053563 | MS.gene61133 | 0.809005 | 2.34E-50 | -1.69E-46 |
| MS.gene053597 | MS.gene61133 | 0.801122 | 1.05E-48 | -1.69E-46 |
| MS.gene053599 | MS.gene61133 | 0.814668 | 1.37E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene61133 | 0.831629 | 1.50E-55 | -1.69E-46 |
| MS.gene053678 | MS.gene61133 | 0.801639 | 8.19E-49 | -1.69E-46 |
| MS.gene053894 | MS.gene61133 | 0.820854 | 5.51E-53 | -1.69E-46 |
| MS.gene053998 | MS.gene61133 | 0.811175 | 7.99E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene61133 | 0.821339 | 4.26E-53 | -1.69E-46 |
| MS.gene055465 | MS.gene61133 | 0.808691 | 2.74E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene61133 | 0.814377 | 1.59E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene61133 | 0.808879 | 2.49E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene61133 | 0.801617 | 8.28E-49 | -1.69E-46 |
| MS.gene05604 | MS.gene61133 | 0.802696 | 4.96E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene61133 | 0.807593 | 4.69E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene61133 | 0.836176 | 1.09E-56 | -1.69E-46 |
| MS.gene057287 | MS.gene61133 | 0.805685 | 1.18E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene61133 | 0.807772 | 4.29E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene61133 | 0.808883 | 2.49E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene61133 | 0.807382 | 5.19E-50 | -1.69E-46 |
| MS.gene05795 | MS.gene61133 | 0.816016 | 6.87E-52 | -1.69E-46 |
| MS.gene058008 | MS.gene61133 | 0.80053 | 1.38E-48 | -1.69E-46 |
| MS.gene058009 | MS.gene61133 | 0.819894 | 9.14E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene61133 | 0.801936 | 7.12E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene61133 | 0.817739 | 2.82E-52 | -1.69E-46 |
| MS.gene059015 | MS.gene61133 | 0.821856 | 3.23E-53 | -1.69E-46 |
| MS.gene059317 | MS.gene61133 | 0.817019 | 4.10E-52 | -1.69E-46 |
| MS.gene060310 | MS.gene61133 | 0.804354 | 2.25E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene61133 | 0.810757 | 9.84E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene61133 | 0.818982 | 1.47E-52 | -1.69E-46 |
| MS.gene061176 | MS.gene61133 | 0.808283 | 3.34E-50 | -1.69E-46 |
| MS.gene061177 | MS.gene61133 | 0.807247 | 5.55E-50 | -1.69E-46 |
| MS.gene061178 | MS.gene61133 | 0.80802 | 3.80E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61133.t1 | MTR_4g062550 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| MS.gene61133.t1 | MTR_4g072780 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| MS.gene61133.t1 | MTR_4g062570 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| MS.gene61133.t1 | MTR_4g032360 | 98.034 | 356 | 7 | 0 | 1 | 356 | 1 | 356 | 0.0 | 708 |
| MS.gene61133.t1 | MTR_5g022720 | 86.607 | 224 | 7 | 1 | 133 | 356 | 73 | 273 | 1.60e-135 | 387 |
| MS.gene61133.t1 | MTR_8g088860 | 41.457 | 357 | 206 | 3 | 1 | 354 | 1 | 357 | 3.81e-101 | 303 |
| MS.gene61133.t1 | MTR_8g088880 | 40.517 | 348 | 205 | 2 | 1 | 346 | 1 | 348 | 1.72e-95 | 288 |
| MS.gene61133.t1 | MTR_8g088890 | 39.867 | 301 | 179 | 2 | 29 | 327 | 1 | 301 | 1.59e-82 | 254 |
| MS.gene61133.t1 | MTR_7g097000 | 22.616 | 451 | 214 | 11 | 17 | 334 | 55 | 503 | 1.04e-22 | 99.4 |
| MS.gene61133.t1 | MTR_7g033690 | 91.667 | 36 | 3 | 0 | 31 | 66 | 1 | 36 | 8.00e-15 | 69.7 |
| MS.gene61133.t1 | MTR_7g096970 | 28.750 | 160 | 111 | 2 | 196 | 353 | 365 | 523 | 1.74e-13 | 72.0 |
| MS.gene61133.t1 | MTR_7g096970 | 25.389 | 193 | 102 | 5 | 30 | 180 | 61 | 253 | 2.32e-11 | 65.5 |
| MS.gene61133.t1 | MTR_2g093550 | 30.061 | 163 | 104 | 6 | 176 | 333 | 50 | 207 | 4.10e-12 | 65.5 |
| MS.gene61133.t1 | MTR_2g093630 | 32.374 | 139 | 86 | 5 | 200 | 333 | 61 | 196 | 6.30e-12 | 65.1 |
| MS.gene61133.t1 | MTR_2g093350 | 27.778 | 180 | 119 | 7 | 181 | 355 | 281 | 454 | 1.24e-11 | 65.9 |
| MS.gene61133.t1 | MTR_2g093620 | 32.143 | 140 | 87 | 5 | 200 | 334 | 296 | 432 | 1.80e-11 | 65.5 |
| MS.gene61133.t1 | MTR_2g093590 | 29.012 | 162 | 104 | 7 | 200 | 355 | 295 | 451 | 2.35e-11 | 65.1 |
| MS.gene61133.t1 | MTR_1g072600 | 28.671 | 143 | 95 | 4 | 196 | 335 | 422 | 560 | 3.23e-11 | 65.1 |
| MS.gene61133.t1 | MTR_2g093390 | 28.395 | 162 | 105 | 7 | 200 | 355 | 295 | 451 | 5.56e-11 | 63.9 |
| MS.gene61133.t1 | MTR_1g072610 | 28.671 | 143 | 95 | 4 | 196 | 335 | 391 | 529 | 7.81e-11 | 63.5 |
| MS.gene61133.t1 | MTR_4g060780 | 32.743 | 113 | 73 | 3 | 223 | 333 | 307 | 418 | 8.22e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61133.t1 | AT1G07750 | 80.056 | 356 | 71 | 0 | 1 | 356 | 1 | 356 | 0.0 | 595 |
| MS.gene61133.t1 | AT2G28680 | 79.494 | 356 | 73 | 0 | 1 | 356 | 1 | 356 | 0.0 | 590 |
| MS.gene61133.t1 | AT1G03890 | 24.694 | 409 | 244 | 11 | 5 | 354 | 44 | 447 | 1.03e-31 | 124 |
| MS.gene61133.t1 | AT1G03880 | 23.214 | 392 | 235 | 9 | 12 | 339 | 42 | 431 | 6.37e-28 | 114 |
| MS.gene61133.t1 | AT5G44120 | 22.475 | 396 | 234 | 8 | 12 | 336 | 48 | 441 | 3.92e-24 | 103 |
| MS.gene61133.t1 | AT5G44120 | 23.780 | 328 | 203 | 7 | 54 | 336 | 12 | 337 | 1.44e-20 | 92.0 |
| MS.gene61133.t1 | AT4G28520 | 25.581 | 301 | 181 | 7 | 78 | 336 | 193 | 492 | 1.84e-18 | 87.0 |
| MS.gene61133.t1 | AT4G28520 | 30.714 | 140 | 96 | 1 | 197 | 336 | 283 | 421 | 1.63e-15 | 77.8 |
| MS.gene61133.t1 | AT2G28490 | 23.514 | 370 | 213 | 12 | 51 | 355 | 131 | 495 | 1.32e-14 | 75.1 |
| MS.gene61133.t1 | AT5G44120 | 24.123 | 228 | 145 | 4 | 136 | 336 | 28 | 254 | 8.43e-14 | 71.2 |
Find 104 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCCATTCTACTTTAATT+TGG | 0.176642 | 4.4:-42830550 | None:intergenic |
| CCTTTCTTGTGTTCCTCTTT+AGG | 0.185981 | 4.4:-42829650 | None:intergenic |
| AGAAAAGGTTGTTGCAATTA+AGG | 0.194128 | 4.4:+42829346 | MS.gene61133:CDS |
| CTCTTGTGATTCTGCTTTGC+AGG | 0.207745 | 4.4:+42829832 | MS.gene61133:CDS |
| CGGAAAAGCTTCTCAACTTC+TGG | 0.246295 | 4.4:-42830490 | None:intergenic |
| GGTCCTAATGGAATCTTTAC+TGG | 0.258702 | 4.4:+42829506 | MS.gene61133:CDS |
| TGCAGGTTACTTACATTGTT+AGG | 0.269206 | 4.4:+42829849 | MS.gene61133:CDS |
| CTTCCTTTGGTTGGTGAGGT+TGG | 0.336501 | 4.4:+42829755 | MS.gene61133:CDS |
| AGGCATGGCTTTGAACTGTT+TGG | 0.348039 | 4.4:+42829670 | MS.gene61133:CDS |
| TTGGTTGGTGAGGTTGGTTT+AGG | 0.350208 | 4.4:+42829761 | MS.gene61133:CDS |
| ATTTGGAGGAGGGAAGAAAA+TGG | 0.351352 | 4.4:-42830533 | None:intergenic |
| TAGGGGAAGTGGCCGTGTTC+AGG | 0.353324 | 4.4:+42829868 | MS.gene61133:CDS |
| GTTCAGGTTGTTGGTGTTGA+TGG | 0.356237 | 4.4:+42829884 | MS.gene61133:CDS |
| TGTGGGAAGGGCTTGGGACT+TGG | 0.357118 | 4.4:+42829544 | MS.gene61133:CDS |
| GGAAGATCCATGTGCTCTCC+TGG | 0.372229 | 4.4:+42829806 | MS.gene61133:CDS |
| CTGAGTTTGTGGGAAGGGCT+TGG | 0.373540 | 4.4:+42829537 | MS.gene61133:CDS |
| TGAGTTTGTGGGAAGGGCTT+GGG | 0.376069 | 4.4:+42829538 | MS.gene61133:CDS |
| GAGGTACTCTGATTCTTCTA+AGG | 0.392927 | 4.4:+42828438 | MS.gene61133:CDS |
| GCAGGTTACTTACATTGTTA+GGG | 0.404646 | 4.4:+42829850 | MS.gene61133:CDS |
| GCTGATCTTGTGAGGATTGA+TGG | 0.405011 | 4.4:+42829785 | MS.gene61133:CDS |
| AAGGTTGCTTATGTTCTTCA+AGG | 0.410175 | 4.4:+42828457 | MS.gene61133:CDS |
| AACAATGTGAAGACACTTGT+TGG | 0.410461 | 4.4:+42829572 | MS.gene61133:CDS |
| GATGCTTTAGCACTCCCCTT+TGG | 0.411635 | 4.4:+42829374 | MS.gene61133:CDS |
| ACCAACCAAAGGAAGGTTCT+TGG | 0.412307 | 4.4:-42829747 | None:intergenic |
| AAAGGGATTGTGAAGCTTGA+TGG | 0.412975 | 4.4:+42829608 | MS.gene61133:CDS |
| GAACACCAAGAACCTTCCTT+TGG | 0.413394 | 4.4:+42829742 | MS.gene61133:CDS |
| TCCATTCTACTTTAATTTGG+AGG | 0.417794 | 4.4:-42830547 | None:intergenic |
| TACACTTTCTTCGCCGATTG+AGG | 0.424668 | 4.4:-42828301 | None:intergenic |
| AGTGGCCGTGTTCAGGTTGT+TGG | 0.428776 | 4.4:+42829875 | MS.gene61133:CDS |
| ATCAAGCTTCACAATCCCTT+TGG | 0.429226 | 4.4:-42829606 | None:intergenic |
| TTGTGTTCCTCTTTAGGCTC+AGG | 0.430393 | 4.4:-42829644 | None:intergenic |
| AATCCAGTAAAGATTCCATT+AGG | 0.431957 | 4.4:-42829509 | None:intergenic |
| AAGTTAGCTCTTCTGAAGAA+TGG | 0.432091 | 4.4:+42828403 | MS.gene61133:CDS |
| ACTTACATTGTTAGGGGAAG+TGG | 0.437332 | 4.4:+42829857 | MS.gene61133:CDS |
| ACACATGGCTGGAAGTTCTT+CGG | 0.454286 | 4.4:+42830417 | MS.gene61133:CDS |
| CATGGCTTTGAACTGTTTGG+AGG | 0.461927 | 4.4:+42829673 | MS.gene61133:CDS |
| ACCAAGAACCTTCCTTTGGT+TGG | 0.462283 | 4.4:+42829746 | MS.gene61133:CDS |
| CACCATGTCACAACACCAAA+GGG | 0.465835 | 4.4:-42829389 | None:intergenic |
| TCCCCTTTGGTGTTGTGACA+TGG | 0.472969 | 4.4:+42829387 | MS.gene61133:CDS |
| GAGTTGGTTGTTCTGTTCCT+CGG | 0.474191 | 4.4:+42829431 | MS.gene61133:CDS |
| AGTCTTGGAGACCACTTTGA+AGG | 0.476765 | 4.4:+42829913 | MS.gene61133:CDS |
| TTGGAGACCACTTTGAAGGC+TGG | 0.478375 | 4.4:+42829917 | MS.gene61133:CDS |
| TTCAACTGAGTTTGTGGGAA+GGG | 0.479133 | 4.4:+42829532 | MS.gene61133:CDS |
| AAGCTTCACAATCCCTTTGG+CGG | 0.479301 | 4.4:-42829603 | None:intergenic |
| GATACAGGAAGTGGAGTTGC+TGG | 0.481664 | 4.4:+42829302 | MS.gene61133:intron |
| TATCGATCTTTCTCCTCAAT+CGG | 0.484260 | 4.4:+42828288 | MS.gene61133:CDS |
| GAACCTTCCTTTGGTTGGTG+AGG | 0.484774 | 4.4:+42829751 | MS.gene61133:CDS |
| GAACTGTTTGGAGGCACCAT+TGG | 0.492260 | 4.4:+42829682 | MS.gene61133:CDS |
| GCTACCTGAATCAGAAGAAA+AGG | 0.493511 | 4.4:+42829331 | MS.gene61133:CDS |
| TCGAAGATTGCTGACAATGA+TGG | 0.499253 | 4.4:+42829974 | MS.gene61133:CDS |
| ATTCTACTTTAATTTGGAGG+AGG | 0.504281 | 4.4:-42830544 | None:intergenic |
| TGGAAGTTCTTCGGTGTGGA+AGG | 0.510879 | 4.4:+42830426 | MS.gene61133:CDS |
| CAGCCTTCCTGAGCCTAAAG+AGG | 0.511945 | 4.4:+42829637 | MS.gene61133:CDS |
| CAGTCCTGTATTTACACACA+TGG | 0.513502 | 4.4:+42830402 | MS.gene61133:intron |
| CCAGCCATGTGTGTAAATAC+AGG | 0.517118 | 4.4:-42830406 | None:intergenic |
| TTGGATGTTGATATTAAGAA+TGG | 0.538544 | 4.4:+42829701 | MS.gene61133:CDS |
| GCTATCACCTACAGTTCTGC+AGG | 0.538663 | 4.4:+42830450 | MS.gene61133:CDS |
| TTGGAAAGCAATCCGCCAAA+GGG | 0.540566 | 4.4:+42829591 | MS.gene61133:CDS |
| AGATTCCATTAGGACCAGTC+AGG | 0.543055 | 4.4:-42829499 | None:intergenic |
| CCTAAAGAGGAACACAAGAA+AGG | 0.543963 | 4.4:+42829650 | MS.gene61133:CDS |
| AAAGGTTGTTGCAATTAAGG+AGG | 0.546053 | 4.4:+42829349 | MS.gene61133:CDS |
| TTCTACTTTAATTTGGAGGA+GGG | 0.549544 | 4.4:-42830543 | None:intergenic |
| CCTGTATTTACACACATGGC+TGG | 0.553443 | 4.4:+42830406 | MS.gene61133:CDS |
| GTTTAGGAGCTGATCTTGTG+AGG | 0.556251 | 4.4:+42829777 | MS.gene61133:CDS |
| TTGATATTAAGAATGGTGGA+AGG | 0.557402 | 4.4:+42829708 | MS.gene61133:CDS |
| GTTCCTCTTTAGGCTCAGGA+AGG | 0.561301 | 4.4:-42829640 | None:intergenic |
| ATGTTACCTTGACGCAACAT+AGG | 0.563061 | 4.4:-42828370 | None:intergenic |
| TGTTGATGGTAAGAGAGTCT+TGG | 0.566059 | 4.4:+42829898 | MS.gene61133:CDS |
| GCAGAATCACAAGAGAATCC+AGG | 0.572154 | 4.4:-42829824 | None:intergenic |
| AGAGAATCCAGGAGAGCACA+TGG | 0.578294 | 4.4:-42829813 | None:intergenic |
| ACTTCAAAAGCACACAAGGC+TGG | 0.580061 | 4.4:+42829458 | MS.gene61133:CDS |
| GATGTTGATATTAAGAATGG+TGG | 0.582311 | 4.4:+42829704 | MS.gene61133:CDS |
| CGCAACATAGGAAGCTCAGA+AGG | 0.585364 | 4.4:-42828358 | None:intergenic |
| CATCAGCAGTCCTCTTTGAA+CGG | 0.585723 | 4.4:-42830510 | None:intergenic |
| AAGGTTGTTGCAATTAAGGA+GGG | 0.587151 | 4.4:+42829350 | MS.gene61133:CDS |
| AAGAAAGTGTACGGTGGTGA+TGG | 0.591740 | 4.4:+42828313 | MS.gene61133:CDS |
| TTCTTAATATCAACATCCAA+TGG | 0.592422 | 4.4:-42829698 | None:intergenic |
| GTTGGAAAGCAATCCGCCAA+AGG | 0.593219 | 4.4:+42829590 | MS.gene61133:CDS |
| AAAGCAGCCTGCAGAACTGT+AGG | 0.593333 | 4.4:-42830457 | None:intergenic |
| CGATACTTCAAAAGCACACA+AGG | 0.594218 | 4.4:+42829454 | MS.gene61133:CDS |
| ATGGTGGATCGTACTATGCT+TGG | 0.594357 | 4.4:+42828332 | MS.gene61133:CDS |
| GATTGCTGACAATGATGGAA+TGG | 0.599379 | 4.4:+42829979 | MS.gene61133:CDS |
| AAAGTGTACGGTGGTGATGG+TGG | 0.599662 | 4.4:+42828316 | MS.gene61133:CDS |
| CCACCATGTCACAACACCAA+AGG | 0.611673 | 4.4:-42829390 | None:intergenic |
| CAACAAAGAGGACACTGAGT+TGG | 0.612479 | 4.4:+42829415 | MS.gene61133:CDS |
| CAACCTCACCAACCAAAGGA+AGG | 0.617830 | 4.4:-42829754 | None:intergenic |
| TTTCAACTGAGTTTGTGGGA+AGG | 0.619355 | 4.4:+42829531 | MS.gene61133:CDS |
| CAGGTTACTTACATTGTTAG+GGG | 0.620675 | 4.4:+42829851 | MS.gene61133:CDS |
| CAACACCAACAACCTGAACA+CGG | 0.621513 | 4.4:-42829880 | None:intergenic |
| CAATCGGCGAAGAAAGTGTA+CGG | 0.625964 | 4.4:+42828304 | MS.gene61133:CDS |
| CAAATCTCCAGCCTTCAAAG+TGG | 0.631181 | 4.4:-42829924 | None:intergenic |
| AGAGGAACACAAGAAAGGCA+TGG | 0.634599 | 4.4:+42829655 | MS.gene61133:CDS |
| AAACCAACCTCACCAACCAA+AGG | 0.641668 | 4.4:-42829758 | None:intergenic |
| TGGCTGGAAGTTCTTCGGTG+TGG | 0.642740 | 4.4:+42830422 | MS.gene61133:CDS |
| GAGCTTCCTATGTTGCGTCA+AGG | 0.643057 | 4.4:+42828364 | MS.gene61133:CDS |
| GAGATTTGTTCATTGTACCG+AGG | 0.645213 | 4.4:+42829939 | MS.gene61133:CDS |
| CCTTTGGTGTTGTGACATGG+TGG | 0.659432 | 4.4:+42829390 | MS.gene61133:CDS |
| TGATATTAAGAATGGTGGAA+GGG | 0.666660 | 4.4:+42829709 | MS.gene61133:CDS |
| ATGTTGCGTCAAGGTAACAT+TGG | 0.668475 | 4.4:+42828373 | MS.gene61133:CDS |
| GACATGGTGGTACAACAAAG+AGG | 0.672878 | 4.4:+42829403 | MS.gene61133:CDS |
| TTAGAAGAATCAGAGTACCT+CGG | 0.684154 | 4.4:-42828436 | None:intergenic |
| ACCATGTCACAACACCAAAG+GGG | 0.723908 | 4.4:-42829388 | None:intergenic |
| CTGACAATGATGGAATGGAG+TGG | 0.742748 | 4.4:+42829984 | MS.gene61133:CDS |
| TCGGCGAAGAAAGTGTACGG+TGG | 0.763757 | 4.4:+42828307 | MS.gene61133:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATCACTAAAAT+CGG | + | chr4.4:42828857-42828876 | MS.gene61133:intron | 10.0% |
| !! | TACTACTATAATATCAATAT+TGG | - | chr4.4:42829210-42829229 | None:intergenic | 15.0% |
| !! | TGTAATCAAATATATTTACT+AGG | + | chr4.4:42830265-42830284 | MS.gene61133:intron | 15.0% |
| !!! | AACTTTATTTTTATACATCA+TGG | + | chr4.4:42829118-42829137 | MS.gene61133:intron | 15.0% |
| !!! | ATAAAGTTATTTTAACTGTA+TGG | - | chr4.4:42829106-42829125 | None:intergenic | 15.0% |
| !!! | ATTTTTCAAAAAAGTTGAAA+CGG | + | chr4.4:42828815-42828834 | MS.gene61133:intron | 15.0% |
| !!! | TTTTAGTGATTTTTTTTTTC+TGG | - | chr4.4:42828856-42828875 | None:intergenic | 15.0% |
| !!! | TTTTTAACATTTGTATCAAA+CGG | + | chr4.4:42828949-42828968 | MS.gene61133:intron | 15.0% |
| !! | AACAAATATCAAACAACAAA+AGG | - | chr4.4:42830076-42830095 | None:intergenic | 20.0% |
| !! | ATCAAATATATTTACTAGGA+AGG | + | chr4.4:42830269-42830288 | MS.gene61133:intron | 20.0% |
| !! | ATGTTTGGATGATTATAAAA+GGG | + | chr4.4:42828718-42828737 | MS.gene61133:intron | 20.0% |
| !! | ATTTCAAAGAAACACAAATT+TGG | - | chr4.4:42830195-42830214 | None:intergenic | 20.0% |
| !! | TATGTTTGGATGATTATAAA+AGG | + | chr4.4:42828717-42828736 | MS.gene61133:intron | 20.0% |
| !! | TTCTATTATACCATCAATAT+TGG | - | chr4.4:42829251-42829270 | None:intergenic | 20.0% |
| !! | TTTCAAAGAAACACAAATTT+GGG | - | chr4.4:42830194-42830213 | None:intergenic | 20.0% |
| !! | TTTGTTAGGGATTATAAAAA+AGG | + | chr4.4:42828745-42828764 | MS.gene61133:intron | 20.0% |
| !!! | AAAAAAATGAATTTCTGAGA+AGG | + | chr4.4:42828882-42828901 | MS.gene61133:intron | 20.0% |
| !!! | GTTTTATTTGTCATTATGTT+TGG | + | chr4.4:42828703-42828722 | MS.gene61133:intron | 20.0% |
| ! | AAGTTAAGAAAAACTCACTT+AGG | - | chr4.4:42830028-42830047 | None:intergenic | 25.0% |
| ! | AGTTAAGAAAAACTCACTTA+GGG | - | chr4.4:42830027-42830046 | None:intergenic | 25.0% |
| ! | ATACTTATGATTTCTTACTG+TGG | + | chr4.4:42830365-42830384 | MS.gene61133:intron | 25.0% |
| ! | CAATATACCTTGATATTACA+AGG | - | chr4.4:42830319-42830338 | None:intergenic | 25.0% |
| ! | TCACAAAAGCAGTATAAAAT+AGG | - | chr4.4:42829184-42829203 | None:intergenic | 25.0% |
| ! | TTCTTAATATCAACATCCAA+TGG | - | chr4.4:42829701-42829720 | None:intergenic | 25.0% |
| ! | TTGGATGTTGATATTAAGAA+TGG | + | chr4.4:42829701-42829720 | MS.gene61133:CDS | 25.0% |
| ! | TTTGTGATTACCAATATTGA+TGG | + | chr4.4:42829197-42829216 | MS.gene61133:intron | 25.0% |
| !! | ACTTTTTATGAATGAAGTGT+TGG | - | chr4.4:42828685-42828704 | None:intergenic | 25.0% |
| !! | ATGACTGATAACATAGATTT+TGG | + | chr4.4:42830112-42830131 | MS.gene61133:intron | 25.0% |
| !! | TCTAGTGTATACATAGATTT+TGG | + | chr4.4:42830156-42830175 | MS.gene61133:intron | 25.0% |
| !!! | ATAAAAGGGTTAGTTTGTTA+GGG | + | chr4.4:42828732-42828751 | MS.gene61133:intron | 25.0% |
| !!! | TATAAAAGGGTTAGTTTGTT+AGG | + | chr4.4:42828731-42828750 | MS.gene61133:intron | 25.0% |
| AATCCAGTAAAGATTCCATT+AGG | - | chr4.4:42829512-42829531 | None:intergenic | 30.0% | |
| AGAAAAGGTTGTTGCAATTA+AGG | + | chr4.4:42829346-42829365 | MS.gene61133:CDS | 30.0% | |
| ATGAGAAAAGCTATACCAAA+GGG | + | chr4.4:42829028-42829047 | MS.gene61133:intron | 30.0% | |
| ATGTATACACTAGACAGATT+GGG | - | chr4.4:42830150-42830169 | None:intergenic | 30.0% | |
| GATGTTGATATTAAGAATGG+TGG | + | chr4.4:42829704-42829723 | MS.gene61133:CDS | 30.0% | |
| GTTAAGAAAAACTCACTTAG+GGG | - | chr4.4:42830026-42830045 | None:intergenic | 30.0% | |
| TAACATTTGTATCAAACGGA+TGG | + | chr4.4:42828953-42828972 | MS.gene61133:intron | 30.0% | |
| TATGTATACACTAGACAGAT+TGG | - | chr4.4:42830151-42830170 | None:intergenic | 30.0% | |
| TGTTGTGATACTTAATAGTG+AGG | + | chr4.4:42829272-42829291 | MS.gene61133:intron | 30.0% | |
| TTTATGTTGATCCCTCAATT+GGG | + | chr4.4:42828568-42828587 | MS.gene61133:intron | 30.0% | |
| ! | TGATATTAAGAATGGTGGAA+GGG | + | chr4.4:42829709-42829728 | MS.gene61133:CDS | 30.0% |
| ! | TTGATATTAAGAATGGTGGA+AGG | + | chr4.4:42829708-42829727 | MS.gene61133:CDS | 30.0% |
| ! | TTTTATGTTGATCCCTCAAT+TGG | + | chr4.4:42828567-42828586 | MS.gene61133:intron | 30.0% |
| !!! | TTTACTGATTTTTTCCTGAC+TGG | + | chr4.4:42829485-42829504 | MS.gene61133:CDS | 30.0% |
| !!! | TTTTATGAATGAAGTGTTGG+TGG | - | chr4.4:42828682-42828701 | None:intergenic | 30.0% |
| AAAGGTTGTTGCAATTAAGG+AGG | + | chr4.4:42829349-42829368 | MS.gene61133:CDS | 35.0% | |
| AACAATGTGAAGACACTTGT+TGG | + | chr4.4:42829572-42829591 | MS.gene61133:CDS | 35.0% | |
| AAGGTTGCTTATGTTCTTCA+AGG | + | chr4.4:42828457-42828476 | MS.gene61133:CDS | 35.0% | |
| AAGGTTGTTGCAATTAAGGA+GGG | + | chr4.4:42829350-42829369 | MS.gene61133:CDS | 35.0% | |
| AGCTCTTATGTTATGTTGAG+AGG | - | chr4.4:42830225-42830244 | None:intergenic | 35.0% | |
| CAGGTTACTTACATTGTTAG+GGG | + | chr4.4:42829851-42829870 | MS.gene61133:CDS | 35.0% | |
| CATGAGAAAAGCTATACCAA+AGG | + | chr4.4:42829027-42829046 | MS.gene61133:intron | 35.0% | |
| GCAGGTTACTTACATTGTTA+GGG | + | chr4.4:42829850-42829869 | MS.gene61133:CDS | 35.0% | |
| TATCGATCTTTCTCCTCAAT+CGG | + | chr4.4:42828288-42828307 | MS.gene61133:CDS | 35.0% | |
| TGCAGGTTACTTACATTGTT+AGG | + | chr4.4:42829849-42829868 | MS.gene61133:CDS | 35.0% | |
| TTATGTTGATCCCTCAATTG+GGG | + | chr4.4:42828569-42828588 | MS.gene61133:intron | 35.0% | |
| TTCGAAACAACGAAAAACCT+CGG | - | chr4.4:42829959-42829978 | None:intergenic | 35.0% | |
| ! | AAGTTAGCTCTTCTGAAGAA+TGG | + | chr4.4:42828403-42828422 | MS.gene61133:CDS | 35.0% |
| ! | ACAACCTTTTCTTCTGATTC+AGG | - | chr4.4:42829338-42829357 | None:intergenic | 35.0% |
| ! | ACGTCTTCAATCAAAAGTGT+CGG | - | chr4.4:42828647-42828666 | None:intergenic | 35.0% |
| ! | GGATTTTCAACTGAGTTTGT+GGG | + | chr4.4:42829527-42829546 | MS.gene61133:CDS | 35.0% |
| ! | TGGATTTTCAACTGAGTTTG+TGG | + | chr4.4:42829526-42829545 | MS.gene61133:CDS | 35.0% |
| ! | TTAGAAGAATCAGAGTACCT+CGG | - | chr4.4:42828439-42828458 | None:intergenic | 35.0% |
| !! | AGTTGAAACGGTTTTGTGTT+TGG | + | chr4.4:42828827-42828846 | MS.gene61133:intron | 35.0% |
| !! | CTACTAGCCTTGTAATATCA+AGG | + | chr4.4:42830309-42830328 | MS.gene61133:intron | 35.0% |
| !! | TAGTGAGGATTTGTTGATAC+AGG | + | chr4.4:42829287-42829306 | MS.gene61133:intron | 35.0% |
| AAAGGGATTGTGAAGCTTGA+TGG | + | chr4.4:42829608-42829627 | MS.gene61133:CDS | 40.0% | |
| ACTTACATTGTTAGGGGAAG+TGG | + | chr4.4:42829857-42829876 | MS.gene61133:CDS | 40.0% | |
| ATCAAGCTTCACAATCCCTT+TGG | - | chr4.4:42829609-42829628 | None:intergenic | 40.0% | |
| ATGTTACCTTGACGCAACAT+AGG | - | chr4.4:42828373-42828392 | None:intergenic | 40.0% | |
| ATGTTGCGTCAAGGTAACAT+TGG | + | chr4.4:42828373-42828392 | MS.gene61133:CDS | 40.0% | |
| ATTTGGAGGAGGGAAGAAAA+TGG | - | chr4.4:42830536-42830555 | None:intergenic | 40.0% | |
| CAGTCCTGTATTTACACACA+TGG | + | chr4.4:42830402-42830421 | MS.gene61133:intron | 40.0% | |
| CCTAAAGAGGAACACAAGAA+AGG | + | chr4.4:42829650-42829669 | MS.gene61133:CDS | 40.0% | |
| CCTTTCTTGTGTTCCTCTTT+AGG | - | chr4.4:42829653-42829672 | None:intergenic | 40.0% | |
| GCTACCTGAATCAGAAGAAA+AGG | + | chr4.4:42829331-42829350 | MS.gene61133:CDS | 40.0% | |
| GCTATCATAACCCCAATTGA+GGG | - | chr4.4:42828582-42828601 | None:intergenic | 40.0% | |
| GGTCCTAATGGAATCTTTAC+TGG | + | chr4.4:42829506-42829525 | MS.gene61133:CDS | 40.0% | |
| TCGAAGATTGCTGACAATGA+TGG | + | chr4.4:42829974-42829993 | MS.gene61133:CDS | 40.0% | |
| TGCTATCATAACCCCAATTG+AGG | - | chr4.4:42828583-42828602 | None:intergenic | 40.0% | |
| TTCAACTGAGTTTGTGGGAA+GGG | + | chr4.4:42829532-42829551 | MS.gene61133:CDS | 40.0% | |
| TTTCAACTGAGTTTGTGGGA+AGG | + | chr4.4:42829531-42829550 | MS.gene61133:CDS | 40.0% | |
| ! | AGAAGCTTTTCCGTTCAAAG+AGG | + | chr4.4:42830500-42830519 | MS.gene61133:CDS | 40.0% |
| ! | CATGCATATTTAGAGCCCTT+TGG | - | chr4.4:42829046-42829065 | None:intergenic | 40.0% |
| ! | CGATACTTCAAAAGCACACA+AGG | + | chr4.4:42829454-42829473 | MS.gene61133:CDS | 40.0% |
| ! | GAGATTTGTTCATTGTACCG+AGG | + | chr4.4:42829939-42829958 | MS.gene61133:CDS | 40.0% |
| ! | GAGGTACTCTGATTCTTCTA+AGG | + | chr4.4:42828438-42828457 | MS.gene61133:CDS | 40.0% |
| ! | GATTGCTGACAATGATGGAA+TGG | + | chr4.4:42829979-42829998 | MS.gene61133:CDS | 40.0% |
| !! | GGATTTGTTGATACAGGAAG+TGG | + | chr4.4:42829293-42829312 | MS.gene61133:intron | 40.0% |
| !! | TGTTGATGGTAAGAGAGTCT+TGG | + | chr4.4:42829898-42829917 | MS.gene61133:CDS | 40.0% |
| !! | TTTTTCCTGACTGGTCCTAA+TGG | + | chr4.4:42829494-42829513 | MS.gene61133:CDS | 40.0% |
| AAACCAACCTCACCAACCAA+AGG | - | chr4.4:42829761-42829780 | None:intergenic | 45.0% | |
| AAGCTTCACAATCCCTTTGG+CGG | - | chr4.4:42829606-42829625 | None:intergenic | 45.0% | |
| ACACATGGCTGGAAGTTCTT+CGG | + | chr4.4:42830417-42830436 | MS.gene61133:CDS | 45.0% | |
| ACCAACCAAAGGAAGGTTCT+TGG | - | chr4.4:42829750-42829769 | None:intergenic | 45.0% | |
| ACCAAGAACCTTCCTTTGGT+TGG | + | chr4.4:42829746-42829765 | MS.gene61133:CDS | 45.0% | |
| ACCATGTCACAACACCAAAG+GGG | - | chr4.4:42829391-42829410 | None:intergenic | 45.0% | |
| AGAGGAACACAAGAAAGGCA+TGG | + | chr4.4:42829655-42829674 | MS.gene61133:CDS | 45.0% | |
| AGATTCCATTAGGACCAGTC+AGG | - | chr4.4:42829502-42829521 | None:intergenic | 45.0% | |
| AGTCTTGGAGACCACTTTGA+AGG | + | chr4.4:42829913-42829932 | MS.gene61133:CDS | 45.0% | |
| CAAATCTCCAGCCTTCAAAG+TGG | - | chr4.4:42829927-42829946 | None:intergenic | 45.0% | |
| CAACAAAGAGGACACTGAGT+TGG | + | chr4.4:42829415-42829434 | MS.gene61133:CDS | 45.0% | |
| CAACACCAACAACCTGAACA+CGG | - | chr4.4:42829883-42829902 | None:intergenic | 45.0% | |
| CACCATGTCACAACACCAAA+GGG | - | chr4.4:42829392-42829411 | None:intergenic | 45.0% | |
| CATCAGCAGTCCTCTTTGAA+CGG | - | chr4.4:42830513-42830532 | None:intergenic | 45.0% | |
| CCAGCCATGTGTGTAAATAC+AGG | - | chr4.4:42830409-42830428 | None:intergenic | 45.0% | |
| CCTGTATTTACACACATGGC+TGG | + | chr4.4:42830406-42830425 | MS.gene61133:CDS | 45.0% | |
| CGGAAAAGCTTCTCAACTTC+TGG | - | chr4.4:42830493-42830512 | None:intergenic | 45.0% | |
| CTCTTGTGATTCTGCTTTGC+AGG | + | chr4.4:42829832-42829851 | MS.gene61133:CDS | 45.0% | |
| GAACACCAAGAACCTTCCTT+TGG | + | chr4.4:42829742-42829761 | MS.gene61133:CDS | 45.0% | |
| GACATGGTGGTACAACAAAG+AGG | + | chr4.4:42829403-42829422 | MS.gene61133:CDS | 45.0% | |
| GCAGAATCACAAGAGAATCC+AGG | - | chr4.4:42829827-42829846 | None:intergenic | 45.0% | |
| GCCACGGAGAATAGGATTTA+TGG | - | chr4.4:42828623-42828642 | None:intergenic | 45.0% | |
| GCCATAAATCCTATTCTCCG+TGG | + | chr4.4:42828619-42828638 | MS.gene61133:intron | 45.0% | |
| GCTGATCTTGTGAGGATTGA+TGG | + | chr4.4:42829785-42829804 | MS.gene61133:CDS | 45.0% | |
| GTTTAGGAGCTGATCTTGTG+AGG | + | chr4.4:42829777-42829796 | MS.gene61133:CDS | 45.0% | |
| TTGGAAAGCAATCCGCCAAA+GGG | + | chr4.4:42829591-42829610 | MS.gene61133:CDS | 45.0% | |
| TTGTGTTCCTCTTTAGGCTC+AGG | - | chr4.4:42829647-42829666 | None:intergenic | 45.0% | |
| ! | AAGAAAGTGTACGGTGGTGA+TGG | + | chr4.4:42828313-42828332 | MS.gene61133:CDS | 45.0% |
| ! | ACTTCAAAAGCACACAAGGC+TGG | + | chr4.4:42829458-42829477 | MS.gene61133:CDS | 45.0% |
| ! | CAATCGGCGAAGAAAGTGTA+CGG | + | chr4.4:42828304-42828323 | MS.gene61133:CDS | 45.0% |
| ! | CTGACAATGATGGAATGGAG+TGG | + | chr4.4:42829984-42830003 | MS.gene61133:CDS | 45.0% |
| ! | GAGTTGGTTGTTCTGTTCCT+CGG | + | chr4.4:42829431-42829450 | MS.gene61133:CDS | 45.0% |
| ! | TACACTTTCTTCGCCGATTG+AGG | - | chr4.4:42828304-42828323 | None:intergenic | 45.0% |
| !! | AATCAAAAGTGTCGGTGCCA+CGG | - | chr4.4:42828639-42828658 | None:intergenic | 45.0% |
| !! | AGGCATGGCTTTGAACTGTT+TGG | + | chr4.4:42829670-42829689 | MS.gene61133:CDS | 45.0% |
| !! | ATGGTGGATCGTACTATGCT+TGG | + | chr4.4:42828332-42828351 | MS.gene61133:CDS | 45.0% |
| !! | CATGGCTTTGAACTGTTTGG+AGG | + | chr4.4:42829673-42829692 | MS.gene61133:CDS | 45.0% |
| !! | GTTCAGGTTGTTGGTGTTGA+TGG | + | chr4.4:42829884-42829903 | MS.gene61133:CDS | 45.0% |
| !! | TTGGTTGGTGAGGTTGGTTT+AGG | + | chr4.4:42829761-42829780 | MS.gene61133:CDS | 45.0% |
| !!! | AGAATGGTTTTGCTGTTCCG+AGG | + | chr4.4:42828419-42828438 | MS.gene61133:CDS | 45.0% |
| AAAGCAGCCTGCAGAACTGT+AGG | - | chr4.4:42830460-42830479 | None:intergenic | 50.0% | |
| CAACCTCACCAACCAAAGGA+AGG | - | chr4.4:42829757-42829776 | None:intergenic | 50.0% | |
| CCACCATGTCACAACACCAA+AGG | - | chr4.4:42829393-42829412 | None:intergenic | 50.0% | |
| CGCAACATAGGAAGCTCAGA+AGG | - | chr4.4:42828361-42828380 | None:intergenic | 50.0% | |
| GAGCTTCCTATGTTGCGTCA+AGG | + | chr4.4:42828364-42828383 | MS.gene61133:CDS | 50.0% | |
| GATACAGGAAGTGGAGTTGC+TGG | + | chr4.4:42829302-42829321 | MS.gene61133:intron | 50.0% | |
| GATGCTTTAGCACTCCCCTT+TGG | + | chr4.4:42829374-42829393 | MS.gene61133:CDS | 50.0% | |
| GCTATCACCTACAGTTCTGC+AGG | + | chr4.4:42830450-42830469 | MS.gene61133:CDS | 50.0% | |
| GTTCCTCTTTAGGCTCAGGA+AGG | - | chr4.4:42829643-42829662 | None:intergenic | 50.0% | |
| GTTGGAAAGCAATCCGCCAA+AGG | + | chr4.4:42829590-42829609 | MS.gene61133:CDS | 50.0% | |
| TGAGTTTGTGGGAAGGGCTT+GGG | + | chr4.4:42829538-42829557 | MS.gene61133:CDS | 50.0% | |
| ! | AGAGAATCCAGGAGAGCACA+TGG | - | chr4.4:42829816-42829835 | None:intergenic | 50.0% |
| ! | GAACCTTCCTTTGGTTGGTG+AGG | + | chr4.4:42829751-42829770 | MS.gene61133:CDS | 50.0% |
| ! | TGGAAGTTCTTCGGTGTGGA+AGG | + | chr4.4:42830426-42830445 | MS.gene61133:CDS | 50.0% |
| ! | TTGGAGACCACTTTGAAGGC+TGG | + | chr4.4:42829917-42829936 | MS.gene61133:CDS | 50.0% |
| !! | AAAGTGTACGGTGGTGATGG+TGG | + | chr4.4:42828316-42828335 | MS.gene61133:CDS | 50.0% |
| !! | CCTTTGGTGTTGTGACATGG+TGG | + | chr4.4:42829390-42829409 | MS.gene61133:CDS | 50.0% |
| !! | CTTCCTTTGGTTGGTGAGGT+TGG | + | chr4.4:42829755-42829774 | MS.gene61133:CDS | 50.0% |
| !! | GAACTGTTTGGAGGCACCAT+TGG | + | chr4.4:42829682-42829701 | MS.gene61133:CDS | 50.0% |
| !! | TCCCCTTTGGTGTTGTGACA+TGG | + | chr4.4:42829387-42829406 | MS.gene61133:CDS | 50.0% |
| !!! | GTGCTTTTGAAGTATCGCCG+AGG | - | chr4.4:42829451-42829470 | None:intergenic | 50.0% |
| CAGCCTTCCTGAGCCTAAAG+AGG | + | chr4.4:42829637-42829656 | MS.gene61133:CDS | 55.0% | |
| CTGAGTTTGTGGGAAGGGCT+TGG | + | chr4.4:42829537-42829556 | MS.gene61133:CDS | 55.0% | |
| GGAAGATCCATGTGCTCTCC+TGG | + | chr4.4:42829806-42829825 | MS.gene61133:CDS | 55.0% | |
| TGGCTGGAAGTTCTTCGGTG+TGG | + | chr4.4:42830422-42830441 | MS.gene61133:CDS | 55.0% | |
| ! | TCGGCGAAGAAAGTGTACGG+TGG | + | chr4.4:42828307-42828326 | MS.gene61133:CDS | 55.0% |
| !! | AGTGGCCGTGTTCAGGTTGT+TGG | + | chr4.4:42829875-42829894 | MS.gene61133:CDS | 55.0% |
| TAGGGGAAGTGGCCGTGTTC+AGG | + | chr4.4:42829868-42829887 | MS.gene61133:CDS | 60.0% | |
| TGTGGGAAGGGCTTGGGACT+TGG | + | chr4.4:42829544-42829563 | MS.gene61133:CDS | 60.0% | |
| !! | GTGTCGGTGCCACGGAGAAT+AGG | - | chr4.4:42828631-42828650 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 42828283 | 42830558 | 42828283 | ID=MS.gene61133 |
| chr4.4 | mRNA | 42828283 | 42830558 | 42828283 | ID=MS.gene61133.t1;Parent=MS.gene61133 |
| chr4.4 | exon | 42828283 | 42828478 | 42828283 | ID=MS.gene61133.t1.exon1;Parent=MS.gene61133.t1 |
| chr4.4 | CDS | 42828283 | 42828478 | 42828283 | ID=cds.MS.gene61133.t1;Parent=MS.gene61133.t1 |
| chr4.4 | exon | 42829309 | 42830029 | 42829309 | ID=MS.gene61133.t1.exon2;Parent=MS.gene61133.t1 |
| chr4.4 | CDS | 42829309 | 42830029 | 42829309 | ID=cds.MS.gene61133.t1;Parent=MS.gene61133.t1 |
| chr4.4 | exon | 42830405 | 42830558 | 42830405 | ID=MS.gene61133.t1.exon3;Parent=MS.gene61133.t1 |
| chr4.4 | CDS | 42830405 | 42830558 | 42830405 | ID=cds.MS.gene61133.t1;Parent=MS.gene61133.t1 |
| Gene Sequence |
| Protein sequence |
