Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68770.t1 | XP_003604007.1 | 95.5 | 491 | 13 | 3 | 1 | 486 | 1 | 487 | 1.90E-271 | 944.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68770.t1 | Q93YQ7 | 72.8 | 470 | 122 | 2 | 23 | 486 | 24 | 493 | 3.6e-210 | 732.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68770.t1 | G7J7T2 | 95.5 | 491 | 13 | 3 | 1 | 486 | 1 | 487 | 1.4e-271 | 944.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene060825 | MS.gene68770 | 0.809166 | 2.16E-50 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68770.t1 | MTR_3g117500 | 96.822 | 472 | 10 | 1 | 20 | 486 | 16 | 487 | 0.0 | 927 |
MS.gene68770.t1 | MTR_8g104820 | 60.470 | 468 | 174 | 5 | 27 | 486 | 29 | 493 | 0.0 | 579 |
MS.gene68770.t1 | MTR_3g080810 | 56.103 | 467 | 196 | 4 | 23 | 483 | 30 | 493 | 0.0 | 535 |
MS.gene68770.t1 | MTR_3g010330 | 55.579 | 466 | 193 | 6 | 28 | 486 | 25 | 483 | 3.35e-177 | 506 |
MS.gene68770.t1 | MTR_4g035975 | 53.753 | 493 | 205 | 8 | 6 | 483 | 5 | 489 | 6.24e-175 | 501 |
MS.gene68770.t1 | MTR_4g035955 | 52.101 | 476 | 212 | 7 | 14 | 483 | 1 | 466 | 2.32e-174 | 498 |
MS.gene68770.t1 | MTR_1g088190 | 54.762 | 462 | 183 | 4 | 27 | 483 | 38 | 478 | 5.26e-173 | 496 |
MS.gene68770.t1 | MTR_4g035930 | 50.947 | 475 | 220 | 5 | 14 | 483 | 1 | 467 | 1.65e-172 | 494 |
MS.gene68770.t1 | MTR_8g099410 | 49.145 | 468 | 222 | 7 | 26 | 481 | 26 | 489 | 4.30e-156 | 454 |
MS.gene68770.t1 | MTR_8g099410 | 49.145 | 468 | 222 | 7 | 26 | 481 | 26 | 489 | 1.20e-154 | 454 |
MS.gene68770.t1 | MTR_5g010000 | 49.892 | 463 | 213 | 7 | 27 | 481 | 39 | 490 | 2.84e-154 | 449 |
MS.gene68770.t1 | MTR_5g009970 | 46.681 | 467 | 230 | 7 | 27 | 485 | 40 | 495 | 3.65e-148 | 433 |
MS.gene68770.t1 | MTR_3g080190 | 45.603 | 489 | 247 | 8 | 9 | 484 | 24 | 506 | 3.05e-144 | 424 |
MS.gene68770.t1 | MTR_5g085730 | 41.532 | 496 | 269 | 9 | 3 | 484 | 9 | 497 | 1.48e-139 | 411 |
MS.gene68770.t1 | MTR_5g093590 | 42.974 | 491 | 262 | 8 | 5 | 481 | 12 | 498 | 6.95e-138 | 407 |
MS.gene68770.t1 | MTR_3g105230 | 42.531 | 482 | 253 | 9 | 3 | 473 | 1 | 469 | 1.03e-134 | 398 |
MS.gene68770.t1 | MTR_1g037340 | 45.791 | 487 | 243 | 11 | 9 | 484 | 6 | 482 | 2.79e-134 | 397 |
MS.gene68770.t1 | MTR_4g074960 | 45.182 | 467 | 239 | 7 | 28 | 481 | 28 | 490 | 1.18e-133 | 400 |
MS.gene68770.t1 | MTR_3g023740 | 43.648 | 488 | 250 | 8 | 1 | 481 | 8 | 477 | 1.81e-131 | 390 |
MS.gene68770.t1 | MTR_5g009970 | 44.131 | 426 | 219 | 7 | 68 | 485 | 7 | 421 | 2.56e-124 | 369 |
MS.gene68770.t1 | MTR_3g113720 | 41.226 | 473 | 254 | 10 | 27 | 484 | 56 | 519 | 1.39e-113 | 345 |
MS.gene68770.t1 | MTR_5g009970 | 42.716 | 405 | 213 | 7 | 89 | 485 | 1 | 394 | 7.85e-112 | 337 |
MS.gene68770.t1 | MTR_8g075990 | 41.226 | 473 | 252 | 9 | 29 | 485 | 64 | 526 | 2.27e-109 | 335 |
MS.gene68770.t1 | MTR_1g088190 | 54.072 | 307 | 115 | 4 | 27 | 328 | 38 | 323 | 7.11e-100 | 304 |
MS.gene68770.t1 | MTR_5g009970 | 42.730 | 337 | 175 | 6 | 156 | 485 | 1 | 326 | 5.31e-87 | 270 |
MS.gene68770.t1 | MTR_2g028480 | 38.386 | 508 | 264 | 17 | 10 | 480 | 91 | 586 | 5.90e-82 | 266 |
MS.gene68770.t1 | MTR_3g082440 | 37.654 | 486 | 257 | 18 | 28 | 480 | 116 | 588 | 6.74e-80 | 261 |
MS.gene68770.t1 | MTR_3g090540 | 34.911 | 507 | 287 | 18 | 7 | 480 | 84 | 580 | 5.13e-78 | 255 |
MS.gene68770.t1 | MTR_7g108925 | 55.769 | 156 | 69 | 0 | 328 | 483 | 43 | 198 | 1.45e-59 | 196 |
MS.gene68770.t1 | MTR_0393s0050 | 56.944 | 144 | 61 | 1 | 328 | 470 | 20 | 163 | 4.47e-50 | 169 |
MS.gene68770.t1 | MTR_1g037320 | 46.809 | 141 | 68 | 4 | 347 | 481 | 150 | 289 | 9.63e-32 | 123 |
MS.gene68770.t1 | MTR_1g037320 | 48.507 | 134 | 68 | 1 | 89 | 221 | 1 | 134 | 2.34e-27 | 111 |
MS.gene68770.t1 | MTR_4g128810 | 38.095 | 147 | 83 | 3 | 337 | 480 | 189 | 330 | 8.32e-25 | 105 |
MS.gene68770.t1 | MTR_7g108920 | 47.059 | 85 | 44 | 1 | 242 | 326 | 94 | 177 | 9.35e-15 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68770.t1 | AT4G39010 | 72.766 | 470 | 122 | 2 | 23 | 486 | 24 | 493 | 0.0 | 719 |
MS.gene68770.t1 | AT1G70710 | 58.452 | 491 | 194 | 4 | 3 | 486 | 1 | 488 | 0.0 | 588 |
MS.gene68770.t1 | AT4G39000 | 56.173 | 486 | 207 | 2 | 7 | 486 | 4 | 489 | 0.0 | 565 |
MS.gene68770.t1 | AT1G23210 | 55.601 | 491 | 208 | 4 | 3 | 486 | 1 | 488 | 0.0 | 565 |
MS.gene68770.t1 | AT4G38990 | 55.738 | 488 | 202 | 4 | 10 | 486 | 8 | 492 | 0.0 | 553 |
MS.gene68770.t1 | AT4G39010 | 70.055 | 364 | 103 | 2 | 23 | 380 | 24 | 387 | 0.0 | 547 |
MS.gene68770.t1 | AT4G02290 | 57.359 | 462 | 189 | 3 | 27 | 483 | 51 | 509 | 0.0 | 546 |
MS.gene68770.t1 | AT1G02800 | 58.174 | 471 | 187 | 4 | 18 | 483 | 33 | 498 | 0.0 | 541 |
MS.gene68770.t1 | AT1G22880 | 53.704 | 486 | 212 | 5 | 7 | 486 | 3 | 481 | 2.41e-171 | 491 |
MS.gene68770.t1 | AT1G71380 | 53.306 | 484 | 212 | 6 | 8 | 485 | 5 | 480 | 3.90e-171 | 491 |
MS.gene68770.t1 | AT4G02290 | 55.500 | 400 | 170 | 3 | 89 | 483 | 1 | 397 | 4.63e-157 | 452 |
MS.gene68770.t1 | AT4G09740 | 48.454 | 485 | 229 | 7 | 12 | 486 | 4 | 477 | 8.60e-151 | 439 |
MS.gene68770.t1 | AT4G11050 | 47.158 | 475 | 235 | 7 | 23 | 485 | 21 | 491 | 3.03e-150 | 440 |
MS.gene68770.t1 | AT4G11050 | 47.158 | 475 | 235 | 7 | 23 | 485 | 21 | 491 | 1.27e-149 | 441 |
MS.gene68770.t1 | AT4G11050 | 47.158 | 475 | 235 | 7 | 23 | 485 | 21 | 491 | 1.31e-149 | 441 |
MS.gene68770.t1 | AT4G23560 | 47.216 | 485 | 238 | 6 | 9 | 486 | 4 | 477 | 1.16e-148 | 433 |
MS.gene68770.t1 | AT1G64390 | 47.558 | 471 | 231 | 7 | 23 | 481 | 20 | 486 | 3.48e-148 | 437 |
MS.gene68770.t1 | AT1G22880 | 53.713 | 404 | 174 | 5 | 89 | 486 | 1 | 397 | 2.66e-142 | 414 |
MS.gene68770.t1 | AT2G32990 | 42.857 | 497 | 260 | 8 | 6 | 481 | 9 | 502 | 7.69e-139 | 410 |
MS.gene68770.t1 | AT2G44570 | 46.201 | 487 | 241 | 10 | 6 | 481 | 13 | 489 | 3.65e-131 | 389 |
MS.gene68770.t1 | AT2G44540 | 45.114 | 481 | 246 | 8 | 11 | 481 | 16 | 488 | 4.69e-131 | 389 |
MS.gene68770.t1 | AT2G44550 | 45.756 | 483 | 241 | 10 | 9 | 481 | 16 | 487 | 6.49e-131 | 389 |
MS.gene68770.t1 | AT2G44560 | 45.114 | 481 | 246 | 8 | 11 | 481 | 16 | 488 | 1.17e-128 | 383 |
MS.gene68770.t1 | AT3G43860 | 44.086 | 465 | 240 | 7 | 28 | 485 | 34 | 485 | 2.62e-127 | 379 |
MS.gene68770.t1 | AT3G43860 | 44.086 | 465 | 240 | 7 | 28 | 485 | 34 | 485 | 2.62e-127 | 379 |
MS.gene68770.t1 | AT4G38990 | 53.371 | 356 | 132 | 4 | 10 | 359 | 8 | 335 | 1.72e-124 | 367 |
MS.gene68770.t1 | AT1G48930 | 45.610 | 467 | 238 | 7 | 27 | 481 | 29 | 491 | 5.16e-124 | 375 |
MS.gene68770.t1 | AT1G75680 | 44.323 | 458 | 233 | 9 | 29 | 474 | 58 | 505 | 6.35e-121 | 364 |
MS.gene68770.t1 | AT1G19940 | 41.416 | 466 | 251 | 9 | 25 | 478 | 45 | 500 | 6.49e-116 | 351 |
MS.gene68770.t1 | AT1G19940 | 41.416 | 466 | 251 | 9 | 25 | 478 | 45 | 500 | 6.49e-116 | 351 |
MS.gene68770.t1 | AT1G22880 | 52.744 | 328 | 142 | 5 | 7 | 328 | 3 | 323 | 6.12e-102 | 309 |
MS.gene68770.t1 | AT2G44570 | 42.394 | 401 | 211 | 9 | 6 | 396 | 13 | 403 | 5.22e-86 | 270 |
MS.gene68770.t1 | AT1G19940 | 40.108 | 369 | 203 | 8 | 25 | 381 | 45 | 407 | 9.39e-81 | 257 |
MS.gene68770.t1 | AT1G65610 | 35.270 | 482 | 275 | 14 | 28 | 481 | 116 | 588 | 8.67e-78 | 255 |
MS.gene68770.t1 | AT5G49720 | 37.282 | 515 | 276 | 17 | 3 | 480 | 79 | 583 | 2.40e-76 | 251 |
MS.gene68770.t1 | AT4G24260 | 35.656 | 488 | 269 | 17 | 28 | 481 | 108 | 584 | 6.23e-62 | 213 |
MS.gene68770.t1 | AT4G24260 | 34.021 | 388 | 215 | 16 | 28 | 381 | 108 | 488 | 1.96e-33 | 132 |
MS.gene68770.t1 | AT4G24260 | 35.535 | 318 | 169 | 13 | 28 | 314 | 108 | 420 | 1.72e-32 | 129 |
Find 133 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCGGTGATAACATCAAATT+TGG | 0.145877 | 3.2:+92792622 | MS.gene68770:CDS |
GAGATTCAACATTTCCTTCT+AGG | 0.166797 | 3.2:-92796620 | None:intergenic |
CTGTTTGTGTCCATGTCTTC+TGG | 0.223582 | 3.2:-92793778 | None:intergenic |
TTCAATATGCAGACAGTTAC+AGG | 0.227377 | 3.2:+92793944 | MS.gene68770:CDS |
ATGTGTGAACTTGATGTTTC+AGG | 0.237520 | 3.2:-92796690 | None:intergenic |
CATTGCTTTGAATGTAGTTT+AGG | 0.285334 | 3.2:-92796237 | None:intergenic |
ATAAACATTGCCACAATTGA+TGG | 0.289598 | 3.2:-92796829 | None:intergenic |
CTCATCTCTACCTTCTATTA+AGG | 0.295970 | 3.2:+92796980 | MS.gene68770:CDS |
TGACGTGCGAAATAAGTAAT+TGG | 0.317600 | 3.2:-92796802 | None:intergenic |
ACAGAAGTGGCGTGGGAATT+CGG | 0.323001 | 3.2:+92792546 | MS.gene68770:CDS |
TTCTTTGAAGGACAACGTTC+GGG | 0.326700 | 3.2:+92792502 | MS.gene68770:CDS |
CAGAAGTGGCGTGGGAATTC+GGG | 0.333466 | 3.2:+92792547 | MS.gene68770:CDS |
TATATTAATGCGCCATTTGT+TGG | 0.343277 | 3.2:+92797161 | MS.gene68770:CDS |
TTATCTTACATGGTTGGTTA+TGG | 0.346424 | 3.2:+92796924 | MS.gene68770:CDS |
AAAGCGTTTCTGAGTTCATT+AGG | 0.346536 | 3.2:-92792712 | None:intergenic |
ATATTAATGCGCCATTTGTT+GGG | 0.347405 | 3.2:+92797162 | MS.gene68770:CDS |
CCCCTTGGGTTTATCTTACA+TGG | 0.349502 | 3.2:+92796914 | MS.gene68770:CDS |
CCTAACCCAAATGTTCTTGT+AGG | 0.353533 | 3.2:+92797059 | MS.gene68770:CDS |
GAGTAATGTCTCAGAATAAC+CGG | 0.358072 | 3.2:-92793902 | None:intergenic |
CCATCAAAATCACAATAATA+AGG | 0.363676 | 3.2:-92794009 | None:intergenic |
ATAGCTCCTACAAGAACATT+TGG | 0.366293 | 3.2:-92797065 | None:intergenic |
TCTCCGGCGACATCGGAAGC+TGG | 0.368714 | 3.2:-92793829 | None:intergenic |
TCGTGGAGTGTGATTGAGTT+TGG | 0.383558 | 3.2:+92792676 | MS.gene68770:CDS |
AACAAACAACAACGATTTGC+TGG | 0.392456 | 3.2:-92792398 | None:intergenic |
ATTGGGGAGCCGCATGGTTA+AGG | 0.397671 | 3.2:+92796191 | MS.gene68770:intron |
CCTACAAGAACATTTGGGTT+AGG | 0.401102 | 3.2:-92797059 | None:intergenic |
CGCACTTGCTGCTTCTTCGA+TGG | 0.401999 | 3.2:+92793861 | MS.gene68770:CDS |
GTTCTTTGAAGGACAACGTT+CGG | 0.406507 | 3.2:+92792501 | MS.gene68770:CDS |
CAGAAGACATGGACACAAAC+AGG | 0.408396 | 3.2:+92793779 | MS.gene68770:CDS |
TCCCACGCCACTTCTGTCTC+TGG | 0.419554 | 3.2:-92792540 | None:intergenic |
TGTTAGTGCACAAACACTTC+GGG | 0.420044 | 3.2:+92796851 | MS.gene68770:CDS |
AAGTGCGGCGGCTGTTTCTC+CGG | 0.426242 | 3.2:-92793845 | None:intergenic |
ACTTACAACACTGATCTTAC+CGG | 0.429293 | 3.2:+92792586 | MS.gene68770:CDS |
GGGAATTCGGGTTTGAGTGA+TGG | 0.430739 | 3.2:+92792559 | MS.gene68770:CDS |
CACTTCTGTCTCTGGTCCTC+TGG | 0.435129 | 3.2:-92792532 | None:intergenic |
CTACTACTGGTGATGCTGAT+TGG | 0.435595 | 3.2:+92792421 | MS.gene68770:CDS |
GTTGTTGTTTGTTCTACTAC+TGG | 0.438724 | 3.2:+92792408 | MS.gene68770:CDS |
GGAATTCGGGTTTGAGTGAT+GGG | 0.438904 | 3.2:+92792560 | MS.gene68770:CDS |
GCGACATCGGAAGCTGGGTT+AGG | 0.440796 | 3.2:-92793823 | None:intergenic |
TTGTTATAGGAAGTCCTAGA+AGG | 0.447365 | 3.2:+92796606 | MS.gene68770:intron |
CAACAGATTGCTTGCAAGGA+AGG | 0.449168 | 3.2:+92797011 | MS.gene68770:CDS |
GGCTGTTTCTCCGGCGACAT+CGG | 0.450417 | 3.2:-92793836 | None:intergenic |
TTGGGTTTATCTTACATGGT+TGG | 0.457905 | 3.2:+92796918 | MS.gene68770:CDS |
AATGTAATCAACTTGTCTCT+TGG | 0.459625 | 3.2:-92796880 | None:intergenic |
CAGTGACAATGCTGATGTTA+AGG | 0.460357 | 3.2:+92793975 | MS.gene68770:CDS |
ATTACTCAGAAATGCTGTTA+AGG | 0.461567 | 3.2:+92793918 | MS.gene68770:CDS |
ACGCTTTGGTCGCAATTCGT+TGG | 0.466420 | 3.2:+92792728 | MS.gene68770:CDS |
GGAGCTATTGTGGGAGGACC+TGG | 0.473308 | 3.2:+92797080 | MS.gene68770:CDS |
ATGGTTAAGGAGGGCTACTC+AGG | 0.477602 | 3.2:+92796204 | MS.gene68770:CDS |
TAGCTCCTACAAGAACATTT+GGG | 0.479600 | 3.2:-92797064 | None:intergenic |
TTATACTTCCAAAATGGCAT+TGG | 0.482936 | 3.2:+92792375 | None:intergenic |
TAATGAACTCAGAAACGCTT+TGG | 0.483275 | 3.2:+92792714 | MS.gene68770:CDS |
AAGGCAATCATGTTCTTTGA+AGG | 0.484150 | 3.2:+92792490 | MS.gene68770:CDS |
GAAGACAACATTAATGAGTT+CGG | 0.484613 | 3.2:+92796277 | MS.gene68770:CDS |
TGAGGATGGTCCTTAATAGA+AGG | 0.486620 | 3.2:-92796990 | None:intergenic |
CAACAGTTGTGGTCTGAGGT+TGG | 0.488075 | 3.2:-92793748 | None:intergenic |
CTCCGGCGACATCGGAAGCT+GGG | 0.490926 | 3.2:-92793828 | None:intergenic |
CCGGTGATAACATCAAATTT+GGG | 0.494860 | 3.2:+92792623 | MS.gene68770:CDS |
ACAACATTAATGAGTTCGGT+TGG | 0.496036 | 3.2:+92796281 | MS.gene68770:CDS |
TTCGATGGCATTCCGATCAT+CGG | 0.503475 | 3.2:+92793876 | MS.gene68770:CDS |
TGTTGTAAGTTGCTTCCACC+TGG | 0.503502 | 3.2:-92796744 | None:intergenic |
AACCTCAGACCACAACTGTT+GGG | 0.503584 | 3.2:+92793750 | MS.gene68770:CDS |
CTCCCAACAGTTGTGGTCTG+AGG | 0.506354 | 3.2:-92793752 | None:intergenic |
TGTTCTTGTAGGAGCTATTG+TGG | 0.507021 | 3.2:+92797070 | MS.gene68770:CDS |
CCCAAATTTGATGTTATCAC+CGG | 0.511014 | 3.2:-92792623 | None:intergenic |
TATGCTAAAACCCCAACAAA+TGG | 0.511723 | 3.2:-92797173 | None:intergenic |
CAACCTCAGACCACAACTGT+TGG | 0.514008 | 3.2:+92793749 | MS.gene68770:CDS |
CCTCAACGTTCTTGTCTCCA+AGG | 0.518942 | 3.2:+92796321 | MS.gene68770:CDS |
ATGATGTTTATGTGGATGAC+AGG | 0.521412 | 3.2:+92797108 | MS.gene68770:CDS |
CAACATTAATGAGTTCGGTT+GGG | 0.522809 | 3.2:+92796282 | MS.gene68770:CDS |
CTGGCCTCTCCCAACAGTTG+TGG | 0.526446 | 3.2:-92793759 | None:intergenic |
ATGTTAGTGCACAAACACTT+CGG | 0.530340 | 3.2:+92796850 | MS.gene68770:CDS |
TCCTCAACAGATTGCTTGCA+AGG | 0.531094 | 3.2:+92797007 | MS.gene68770:CDS |
AAATGGCGCATTAATATATG+TGG | 0.534377 | 3.2:-92797156 | None:intergenic |
CTAAACTACATTCAAAGCAA+TGG | 0.537231 | 3.2:+92796238 | MS.gene68770:CDS |
GGGGAGCCGCATGGTTAAGG+AGG | 0.538718 | 3.2:+92796194 | MS.gene68770:intron |
CATCAAATTTGGGTTTCCGA+TGG | 0.547688 | 3.2:+92792633 | MS.gene68770:CDS |
GACCAGAGACAGAAGTGGCG+TGG | 0.550720 | 3.2:+92792538 | MS.gene68770:CDS |
AATAACCGGGATCCGATGAT+CGG | 0.551697 | 3.2:-92793888 | None:intergenic |
GTTCTTGTAGGAGCTATTGT+GGG | 0.555313 | 3.2:+92797071 | MS.gene68770:CDS |
TCCTTGCAAGCAATCTGTTG+AGG | 0.555459 | 3.2:-92797008 | None:intergenic |
TCAATATGCAGACAGTTACA+GGG | 0.557642 | 3.2:+92793945 | MS.gene68770:CDS |
TCACACATCGAGTACACTCC+TGG | 0.560468 | 3.2:+92796705 | MS.gene68770:CDS |
TTGGGAGAGGCCAGAAGACA+TGG | 0.561765 | 3.2:+92793768 | MS.gene68770:CDS |
GGTTGGGACAACAAGCATGC+TGG | 0.562101 | 3.2:+92796298 | MS.gene68770:CDS |
ATTGTTGTCGTAAACGCCAT+CGG | 0.566271 | 3.2:-92792649 | None:intergenic |
ACATAAACATCATCTTCTCC+AGG | 0.567710 | 3.2:-92797098 | None:intergenic |
CTTGACATTGGGGAGCCGCA+TGG | 0.568837 | 3.2:+92796185 | MS.gene68770:intron |
TATTAATGCGCCATTTGTTG+GGG | 0.570106 | 3.2:+92797163 | MS.gene68770:CDS |
ACCAGAGACAGAAGTGGCGT+GGG | 0.571423 | 3.2:+92792539 | MS.gene68770:CDS |
CTACTGGTGATGCTGATTGG+AGG | 0.572389 | 3.2:+92792424 | MS.gene68770:CDS |
ATTCGGGTTTGAGTGATGGG+TGG | 0.574191 | 3.2:+92792563 | MS.gene68770:CDS |
CAAAGCAATGGTAAAACACT+CGG | 0.575426 | 3.2:+92796250 | MS.gene68770:CDS |
ACCGGCGGTTACTACGACGC+CGG | 0.576662 | 3.2:+92792604 | MS.gene68770:CDS |
AACCCAGCTTCCGATGTCGC+CGG | 0.578286 | 3.2:+92793826 | MS.gene68770:CDS |
GGCGCATTAATATATGTGGT+TGG | 0.580585 | 3.2:-92797152 | None:intergenic |
CTTGTAGGAGCTATTGTGGG+AGG | 0.586975 | 3.2:+92797074 | MS.gene68770:CDS |
TGGAGAAGATGATGTTTATG+TGG | 0.587154 | 3.2:+92797100 | MS.gene68770:CDS |
TGCAAGCAATCTGTTGAGGA+TGG | 0.591228 | 3.2:-92797004 | None:intergenic |
AACTATACTACTTACTAACC+TGG | 0.596763 | 3.2:-92794035 | None:intergenic |
CATCGAAGAAGCAGCAAGTG+CGG | 0.597641 | 3.2:-92793860 | None:intergenic |
GCATAGGAAGCTCTCTGCTG+AGG | 0.604029 | 3.2:-92796658 | None:intergenic |
GCATTCCGATCATCGGATCC+CGG | 0.607253 | 3.2:+92793883 | MS.gene68770:CDS |
GGTCTGTATATGAGTCCACC+AGG | 0.612971 | 3.2:-92796723 | None:intergenic |
TTTCAGGTAGTAGTGTGCAT+AGG | 0.626912 | 3.2:-92796674 | None:intergenic |
CGAAGAAGCAGCAAGTGCGG+CGG | 0.628435 | 3.2:-92793857 | None:intergenic |
GCGTTTCTGAGTTCATTAGG+AGG | 0.634386 | 3.2:-92792709 | None:intergenic |
AACCATGTAAGATAAACCCA+AGG | 0.635575 | 3.2:-92796916 | None:intergenic |
AATTGGCGTAGACTAACTCA+AGG | 0.637923 | 3.2:-92796785 | None:intergenic |
CAGACCACAACTGTTGGGAG+AGG | 0.640454 | 3.2:+92793755 | MS.gene68770:CDS |
CAGAGGACCAGAGACAGAAG+TGG | 0.641335 | 3.2:+92792533 | MS.gene68770:CDS |
ACCATGTAAGATAAACCCAA+GGG | 0.641726 | 3.2:-92796915 | None:intergenic |
ACGTCACAAACCATCAATTG+TGG | 0.642957 | 3.2:+92796819 | MS.gene68770:CDS |
TACAACACTGATCTTACCGG+CGG | 0.646779 | 3.2:+92792589 | MS.gene68770:CDS |
TTACGACAACAATGTTGTCG+TGG | 0.652135 | 3.2:+92792659 | MS.gene68770:CDS |
GACAATGCTGATGTTAAGGA+TGG | 0.656075 | 3.2:+92793979 | MS.gene68770:CDS |
GGGAGCCGCATGGTTAAGGA+GGG | 0.656626 | 3.2:+92796195 | MS.gene68770:intron |
ACCGGCGTCGTAGTAACCGC+CGG | 0.660182 | 3.2:-92792605 | None:intergenic |
AGTAATGTCTCAGAATAACC+GGG | 0.665758 | 3.2:-92793901 | None:intergenic |
TTATGCGGAGGCATTATCGA+AGG | 0.671544 | 3.2:+92792471 | MS.gene68770:CDS |
CACATCGAGTACACTCCTGG+TGG | 0.672404 | 3.2:+92796708 | MS.gene68770:CDS |
TCTTTGAAGGACAACGTTCG+GGG | 0.677942 | 3.2:+92792503 | MS.gene68770:CDS |
GGTGGACTCATATACAGACC+AGG | 0.680214 | 3.2:+92796726 | MS.gene68770:CDS |
CAATATGCAGACAGTTACAG+GGG | 0.695263 | 3.2:+92793946 | MS.gene68770:CDS |
CCACGATGATGAATACGTTG+TGG | 0.695422 | 3.2:-92796957 | None:intergenic |
TGTGAATGCACATGATTATG+CGG | 0.701086 | 3.2:+92792456 | MS.gene68770:CDS |
GGACTCATATACAGACCAGG+TGG | 0.718917 | 3.2:+92796729 | MS.gene68770:CDS |
CCTTGGAGACAAGAACGTTG+AGG | 0.724038 | 3.2:-92796321 | None:intergenic |
CCACAACGTATTCATCATCG+TGG | 0.724350 | 3.2:+92796957 | MS.gene68770:CDS |
TGATGTTTATGTGGATGACA+GGG | 0.726322 | 3.2:+92797109 | MS.gene68770:CDS |
CCATGTAAGATAAACCCAAG+GGG | 0.735452 | 3.2:-92796914 | None:intergenic |
AGTAGCCCTCCTTAACCATG+CGG | 0.745611 | 3.2:-92796200 | None:intergenic |
GAATGCACATGATTATGCGG+AGG | 0.747781 | 3.2:+92792459 | MS.gene68770:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAATAAATAAATAAATAA+AGG | - | chr3.2:92792924-92792943 | None:intergenic | 0.0% |
!! | AATTTACTTATAAAAAGAAA+TGG | - | chr3.2:92793145-92793164 | None:intergenic | 10.0% |
!! | ATATTAGATATATCAAAAAA+TGG | + | chr3.2:92793640-92793659 | MS.gene68770:intron | 10.0% |
!! | ATTAGTTAATTAATTAAAAG+TGG | + | chr3.2:92794829-92794848 | MS.gene68770:intron | 10.0% |
!! | ATTCTCATTAATTTAAAAAT+TGG | - | chr3.2:92793591-92793610 | None:intergenic | 10.0% |
!! | TTAATCAAAAAAGAAATTTA+CGG | + | chr3.2:92792987-92793006 | MS.gene68770:intron | 10.0% |
!!! | TAAATTTCTTTTTTGATTAA+GGG | - | chr3.2:92792987-92793006 | None:intergenic | 10.0% |
!!! | TTCTAATAATAAATACTTTT+TGG | + | chr3.2:92794401-92794420 | MS.gene68770:intron | 10.0% |
!! | AAATAAATAAATAAAGGAAG+AGG | - | chr3.2:92792918-92792937 | None:intergenic | 15.0% |
!! | TCATTAATTTAAAAATTGGA+TGG | - | chr3.2:92793587-92793606 | None:intergenic | 15.0% |
!! | TGTCATGTAATTTAATAATT+AGG | - | chr3.2:92793700-92793719 | None:intergenic | 15.0% |
!!! | AATTTGCTTGTATAAAAAAA+CGG | + | chr3.2:92793222-92793241 | MS.gene68770:intron | 15.0% |
!!! | GAATTTAGAATTATAAAAAC+AGG | + | chr3.2:92794440-92794459 | MS.gene68770:intron | 15.0% |
!!! | GTAAATTTCTTTTTTGATTA+AGG | - | chr3.2:92792988-92793007 | None:intergenic | 15.0% |
!! | AAAATTCAAAACGATAACAT+CGG | - | chr3.2:92794111-92794130 | None:intergenic | 20.0% |
!! | AAATTTGAATTGAATAGAGA+TGG | - | chr3.2:92796349-92796368 | None:intergenic | 20.0% |
!! | ACAAAAAAAAAAACTGAAAG+CGG | - | chr3.2:92793095-92793114 | None:intergenic | 20.0% |
!! | CAAAAAAAAAAAAAACCATG+CGG | - | chr3.2:92795185-92795204 | None:intergenic | 20.0% |
!! | CCTAAATCAATTTATTGAAA+TGG | + | chr3.2:92793014-92793033 | MS.gene68770:intron | 20.0% |
!! | GTATTCATTTCATATCATAT+GGG | + | chr3.2:92794331-92794350 | MS.gene68770:intron | 20.0% |
!! | TAAATTGAATAGTGCATATT+TGG | - | chr3.2:92794665-92794684 | None:intergenic | 20.0% |
!! | TAAGGTTTGAAAAATATAAG+CGG | + | chr3.2:92794515-92794534 | MS.gene68770:intron | 20.0% |
!! | TACTTATAAAAAGAAATGGA+AGG | - | chr3.2:92793141-92793160 | None:intergenic | 20.0% |
!! | TATTAGAAATTGAGTGTAAA+AGG | - | chr3.2:92794389-92794408 | None:intergenic | 20.0% |
!! | TGTATTCATTTCATATCATA+TGG | + | chr3.2:92794330-92794349 | MS.gene68770:intron | 20.0% |
!! | TTGTTCACATTTAGAAATAT+AGG | + | chr3.2:92793111-92793130 | MS.gene68770:intron | 20.0% |
!!! | ACATTGATAATGATAGTATA+TGG | + | chr3.2:92794142-92794161 | MS.gene68770:intron | 20.0% |
!!! | AGTAAATGAATTGTTGTTAT+AGG | + | chr3.2:92796593-92796612 | MS.gene68770:intron | 20.0% |
!!! | ATTGCATTTTTCCTTTTTAT+AGG | + | chr3.2:92794082-92794101 | MS.gene68770:intron | 20.0% |
!!! | ATTTACTCTTTAAAACTGTT+GGG | - | chr3.2:92795285-92795304 | None:intergenic | 20.0% |
!!! | CCATTTCAATAAATTGATTT+AGG | - | chr3.2:92793017-92793036 | None:intergenic | 20.0% |
!!! | TATTTACTCTTTAAAACTGT+TGG | - | chr3.2:92795286-92795305 | None:intergenic | 20.0% |
!!! | TCAAAATCATCATTTTTCTT+AGG | - | chr3.2:92793290-92793309 | None:intergenic | 20.0% |
! | AAATAAATAAAGGAAGAGGA+AGG | - | chr3.2:92792914-92792933 | None:intergenic | 25.0% |
! | AAATTTAGCAGAGAAATTTG+AGG | + | chr3.2:92795347-92795366 | MS.gene68770:intron | 25.0% |
! | CAATCAACATCGAATTATAT+AGG | + | chr3.2:92794960-92794979 | MS.gene68770:intron | 25.0% |
! | CATTCAATTAATGATGTATG+TGG | + | chr3.2:92793179-92793198 | MS.gene68770:intron | 25.0% |
! | CCATCAAAATCACAATAATA+AGG | - | chr3.2:92794012-92794031 | None:intergenic | 25.0% |
! | GATCGTAAATGTAAATAAAC+TGG | - | chr3.2:92793073-92793092 | None:intergenic | 25.0% |
! | GTAGTGATGACAAAAATAAA+GGG | - | chr3.2:92793318-92793337 | None:intergenic | 25.0% |
! | GTATACAGTTATAATCGAAA+CGG | - | chr3.2:92793531-92793550 | None:intergenic | 25.0% |
! | TATTACTAGTACTATGTGAA+GGG | + | chr3.2:92795023-92795042 | MS.gene68770:intron | 25.0% |
! | TGTAGTGATGACAAAAATAA+AGG | - | chr3.2:92793319-92793338 | None:intergenic | 25.0% |
! | TTATTACTAGTACTATGTGA+AGG | + | chr3.2:92795022-92795041 | MS.gene68770:intron | 25.0% |
!! | ATGAGAATTCTTTTCACTTT+TGG | + | chr3.2:92793603-92793622 | MS.gene68770:intron | 25.0% |
!! | CCTTATTATTGTGATTTTGA+TGG | + | chr3.2:92794009-92794028 | MS.gene68770:CDS | 25.0% |
!! | CTATTTGCTACACTATTAAT+TGG | + | chr3.2:92795117-92795136 | MS.gene68770:intron | 25.0% |
!!! | AAATGGTTGATGACAAAATT+TGG | + | chr3.2:92793657-92793676 | MS.gene68770:intron | 25.0% |
!!! | AGACAAGTTGATTACATTTT+AGG | + | chr3.2:92796885-92796904 | MS.gene68770:CDS | 25.0% |
!!! | TATTTTTGTCATCACTACAA+AGG | + | chr3.2:92793320-92793339 | MS.gene68770:intron | 25.0% |
!!! | TTTACTCTTTAAAACTGTTG+GGG | - | chr3.2:92795284-92795303 | None:intergenic | 25.0% |
AAATGGCGCATTAATATATG+TGG | - | chr3.2:92797159-92797178 | None:intergenic | 30.0% | |
AACATCGGATACCTATAAAA+AGG | - | chr3.2:92794096-92794115 | None:intergenic | 30.0% | |
AACTATACTACTTACTAACC+TGG | - | chr3.2:92794038-92794057 | None:intergenic | 30.0% | |
AATGTAATCAACTTGTCTCT+TGG | - | chr3.2:92796883-92796902 | None:intergenic | 30.0% | |
ACAACAAAGCTTCTGTAAAA+CGG | - | chr3.2:92794601-92794620 | None:intergenic | 30.0% | |
ACAATTTACTACTGAATCGT+TGG | + | chr3.2:92792807-92792826 | MS.gene68770:intron | 30.0% | |
ACATTGTACATGCTACTATT+AGG | + | chr3.2:92793717-92793736 | MS.gene68770:intron | 30.0% | |
AGTTATAATCGAAACGGAAA+TGG | - | chr3.2:92793525-92793544 | None:intergenic | 30.0% | |
ATAAACATTGCCACAATTGA+TGG | - | chr3.2:92796832-92796851 | None:intergenic | 30.0% | |
ATATTAATGCGCCATTTGTT+GGG | + | chr3.2:92797162-92797181 | MS.gene68770:CDS | 30.0% | |
ATGTTAAGTTTAGAGAGAGA+AGG | + | chr3.2:92796127-92796146 | MS.gene68770:intron | 30.0% | |
ATGTTGATGCAATGGTTATT+TGG | - | chr3.2:92795393-92795412 | None:intergenic | 30.0% | |
ATTACACAACAAATCAACCA+TGG | + | chr3.2:92795774-92795793 | MS.gene68770:intron | 30.0% | |
ATTACTAGTACTATGTGAAG+GGG | + | chr3.2:92795024-92795043 | MS.gene68770:intron | 30.0% | |
ATTACTCAGAAATGCTGTTA+AGG | + | chr3.2:92793918-92793937 | MS.gene68770:CDS | 30.0% | |
ATTGTACCTGAACAAAAATG+CGG | - | chr3.2:92792792-92792811 | None:intergenic | 30.0% | |
CAATTTACTACTGAATCGTT+GGG | + | chr3.2:92792808-92792827 | MS.gene68770:intron | 30.0% | |
CTAAACTACATTCAAAGCAA+TGG | + | chr3.2:92796238-92796257 | MS.gene68770:CDS | 30.0% | |
GAAGACAACATTAATGAGTT+CGG | + | chr3.2:92796277-92796296 | MS.gene68770:CDS | 30.0% | |
GATAAGACACGATTGATAAA+AGG | + | chr3.2:92795551-92795570 | MS.gene68770:intron | 30.0% | |
GTTTGAAAAATATAAGCGGT+GGG | + | chr3.2:92794519-92794538 | MS.gene68770:intron | 30.0% | |
TAGAAATTGAGTGTAAAAGG+TGG | - | chr3.2:92794386-92794405 | None:intergenic | 30.0% | |
TATATTAATGCGCCATTTGT+TGG | + | chr3.2:92797161-92797180 | MS.gene68770:CDS | 30.0% | |
TCTTTCTTTCTATCCAGTTA+CGG | + | chr3.2:92795457-92795476 | MS.gene68770:intron | 30.0% | |
TGCTACACTATTAATTGGTT+TGG | + | chr3.2:92795122-92795141 | MS.gene68770:intron | 30.0% | |
TGCTTGTATAAAAAAACGGA+GGG | + | chr3.2:92793226-92793245 | MS.gene68770:intron | 30.0% | |
TTGCTTGTATAAAAAAACGG+AGG | + | chr3.2:92793225-92793244 | MS.gene68770:intron | 30.0% | |
TTGGATACATTACATTGTAC+AGG | + | chr3.2:92795141-92795160 | MS.gene68770:intron | 30.0% | |
TTTATCAATCGTGTCTTATC+CGG | - | chr3.2:92795551-92795570 | None:intergenic | 30.0% | |
! | AAAACACAGAGCATTACAAA+GGG | + | chr3.2:92795233-92795252 | MS.gene68770:intron | 30.0% |
! | AATTGCATCTCGAGAATTTT+TGG | + | chr3.2:92794906-92794925 | MS.gene68770:intron | 30.0% |
! | ACAAGTGATTTTGCGAAATA+AGG | + | chr3.2:92794497-92794516 | MS.gene68770:intron | 30.0% |
! | ATTTCATATCATATGGGCTA+TGG | + | chr3.2:92794337-92794356 | MS.gene68770:intron | 30.0% |
! | CATTGCTTTGAATGTAGTTT+AGG | - | chr3.2:92796240-92796259 | None:intergenic | 30.0% |
! | TAAAACACAGAGCATTACAA+AGG | + | chr3.2:92795232-92795251 | MS.gene68770:intron | 30.0% |
! | TTATCTTACATGGTTGGTTA+TGG | + | chr3.2:92796924-92796943 | MS.gene68770:CDS | 30.0% |
! | TTGATGTTTGGAATCACATA+AGG | - | chr3.2:92795620-92795639 | None:intergenic | 30.0% |
! | TTGTAATGCTCTGTGTTTTA+TGG | - | chr3.2:92795232-92795251 | None:intergenic | 30.0% |
!! | AAATATGGCTTTGAAAGGAA+AGG | + | chr3.2:92796034-92796053 | MS.gene68770:intron | 30.0% |
!! | AAATTTTCCGTGTCATTATG+TGG | + | chr3.2:92793402-92793421 | MS.gene68770:intron | 30.0% |
!! | AATATGGCTTTGAAAGGAAA+GGG | + | chr3.2:92796035-92796054 | MS.gene68770:intron | 30.0% |
!!! | TTTGGAATTTTTTGCCAGTT+AGG | + | chr3.2:92794542-92794561 | MS.gene68770:intron | 30.0% |
AAATCCGAAGCAAACTATTG+TGG | + | chr3.2:92794257-92794276 | MS.gene68770:intron | 35.0% | |
AACAAACAACAACGATTTGC+TGG | - | chr3.2:92792401-92792420 | None:intergenic | 35.0% | |
AACCATGTAAGATAAACCCA+AGG | - | chr3.2:92796919-92796938 | None:intergenic | 35.0% | |
AAGGCAAATAGAATGAAGTC+AGG | + | chr3.2:92795570-92795589 | MS.gene68770:intron | 35.0% | |
AAGGCAATCATGTTCTTTGA+AGG | + | chr3.2:92792490-92792509 | MS.gene68770:CDS | 35.0% | |
AAGGGGTAATATTTGTCTGA+GGG | + | chr3.2:92795041-92795060 | MS.gene68770:intron | 35.0% | |
ACAACATTAATGAGTTCGGT+TGG | + | chr3.2:92796281-92796300 | MS.gene68770:CDS | 35.0% | |
ACATAAACATCATCTTCTCC+AGG | - | chr3.2:92797101-92797120 | None:intergenic | 35.0% | |
ACCATGTAAGATAAACCCAA+GGG | - | chr3.2:92796918-92796937 | None:intergenic | 35.0% | |
ACTTACAACACTGATCTTAC+CGG | + | chr3.2:92792586-92792605 | MS.gene68770:CDS | 35.0% | |
AGTAATGTCTCAGAATAACC+GGG | - | chr3.2:92793904-92793923 | None:intergenic | 35.0% | |
ATAGCTCCTACAAGAACATT+TGG | - | chr3.2:92797068-92797087 | None:intergenic | 35.0% | |
ATGATGTTTATGTGGATGAC+AGG | + | chr3.2:92797108-92797127 | MS.gene68770:CDS | 35.0% | |
ATGTGTGAACTTGATGTTTC+AGG | - | chr3.2:92796693-92796712 | None:intergenic | 35.0% | |
ATGTTAGTGCACAAACACTT+CGG | + | chr3.2:92796850-92796869 | MS.gene68770:CDS | 35.0% | |
ATTGAATAGAGATGGAACCT+TGG | - | chr3.2:92796341-92796360 | None:intergenic | 35.0% | |
ATTTCCTTTGTCAATATCCG+CGG | - | chr3.2:92795423-92795442 | None:intergenic | 35.0% | |
CAAAGCAATGGTAAAACACT+CGG | + | chr3.2:92796250-92796269 | MS.gene68770:CDS | 35.0% | |
CAACATTAATGAGTTCGGTT+GGG | + | chr3.2:92796282-92796301 | MS.gene68770:CDS | 35.0% | |
CCAAAAAAATGATCCGTAAC+TGG | - | chr3.2:92795473-92795492 | None:intergenic | 35.0% | |
CCCAAATTTGATGTTATCAC+CGG | - | chr3.2:92792626-92792645 | None:intergenic | 35.0% | |
CCGGTGATAACATCAAATTT+GGG | + | chr3.2:92792623-92792642 | MS.gene68770:CDS | 35.0% | |
CTCATCTCTACCTTCTATTA+AGG | + | chr3.2:92796980-92796999 | MS.gene68770:CDS | 35.0% | |
GAGATTCAACATTTCCTTCT+AGG | - | chr3.2:92796623-92796642 | None:intergenic | 35.0% | |
GAGTAATGTCTCAGAATAAC+CGG | - | chr3.2:92793905-92793924 | None:intergenic | 35.0% | |
GGTTATTTGGATATGATAGC+TGG | - | chr3.2:92795380-92795399 | None:intergenic | 35.0% | |
GGTTTGAAAAATATAAGCGG+TGG | + | chr3.2:92794518-92794537 | MS.gene68770:intron | 35.0% | |
GTAACACTTCCATTATGTGT+CGG | - | chr3.2:92794883-92794902 | None:intergenic | 35.0% | |
TAACACTTCCATTATGTGTC+GGG | - | chr3.2:92794882-92794901 | None:intergenic | 35.0% | |
TAATGAACTCAGAAACGCTT+TGG | + | chr3.2:92792714-92792733 | MS.gene68770:CDS | 35.0% | |
TAGCTCCTACAAGAACATTT+GGG | - | chr3.2:92797067-92797086 | None:intergenic | 35.0% | |
TATGCTAAAACCCCAACAAA+TGG | - | chr3.2:92797176-92797195 | None:intergenic | 35.0% | |
TCAATATGCAGACAGTTACA+GGG | + | chr3.2:92793945-92793964 | MS.gene68770:CDS | 35.0% | |
TGACGTGCGAAATAAGTAAT+TGG | - | chr3.2:92796805-92796824 | None:intergenic | 35.0% | |
TGATGTTTATGTGGATGACA+GGG | + | chr3.2:92797109-92797128 | MS.gene68770:CDS | 35.0% | |
TGGAGAAGATGATGTTTATG+TGG | + | chr3.2:92797100-92797119 | MS.gene68770:CDS | 35.0% | |
TGTACAGGACGAATTGTTAT+GGG | + | chr3.2:92795156-92795175 | MS.gene68770:intron | 35.0% | |
TGTACATGCTACTATTAGGT+GGG | + | chr3.2:92793721-92793740 | MS.gene68770:intron | 35.0% | |
TGTGAATGCACATGATTATG+CGG | + | chr3.2:92792456-92792475 | MS.gene68770:CDS | 35.0% | |
TTCAATATGCAGACAGTTAC+AGG | + | chr3.2:92793944-92793963 | MS.gene68770:CDS | 35.0% | |
TTCTTAGGAACGACTAAACA+TGG | - | chr3.2:92793275-92793294 | None:intergenic | 35.0% | |
TTGAAGTCCGTGAATTTCAT+CGG | + | chr3.2:92793449-92793468 | MS.gene68770:intron | 35.0% | |
TTGGGTTTATCTTACATGGT+TGG | + | chr3.2:92796918-92796937 | MS.gene68770:CDS | 35.0% | |
TTGTACAGGACGAATTGTTA+TGG | + | chr3.2:92795155-92795174 | MS.gene68770:intron | 35.0% | |
TTGTACATGCTACTATTAGG+TGG | + | chr3.2:92793720-92793739 | MS.gene68770:intron | 35.0% | |
TTGTTATAGGAAGTCCTAGA+AGG | + | chr3.2:92796606-92796625 | MS.gene68770:intron | 35.0% | |
! | AAAAATATAAGCGGTGGGTT+TGG | + | chr3.2:92794524-92794543 | MS.gene68770:intron | 35.0% |
! | AAAGCGTTTCTGAGTTCATT+AGG | - | chr3.2:92792715-92792734 | None:intergenic | 35.0% |
! | ACCTTCTCTCTAAAAACACA+TGG | + | chr3.2:92796153-92796172 | MS.gene68770:intron | 35.0% |
! | CCTTCTCTCTAAAAACACAT+GGG | + | chr3.2:92796154-92796173 | MS.gene68770:intron | 35.0% |
! | CTTCTCTCTAAAAACACATG+GGG | + | chr3.2:92796155-92796174 | MS.gene68770:intron | 35.0% |
! | TATTAATGCGCCATTTGTTG+GGG | + | chr3.2:92797163-92797182 | MS.gene68770:CDS | 35.0% |
!! | ATTTTAGGTGATAACCCCTT+GGG | + | chr3.2:92796900-92796919 | MS.gene68770:CDS | 35.0% |
!! | CTGAGAAATATGGCTTTGAA+AGG | + | chr3.2:92796029-92796048 | MS.gene68770:intron | 35.0% |
!! | GTTGTTGTTTGTTCTACTAC+TGG | + | chr3.2:92792408-92792427 | MS.gene68770:CDS | 35.0% |
!! | TTGTGATTTTGATGGATACC+AGG | + | chr3.2:92794017-92794036 | MS.gene68770:CDS | 35.0% |
!! | TTTGCCACAATAGTTTGCTT+CGG | - | chr3.2:92794264-92794283 | None:intergenic | 35.0% |
!!! | CCAGTTACGGATCATTTTTT+TGG | + | chr3.2:92795470-92795489 | MS.gene68770:intron | 35.0% |
AAGGGAAAGAACTAAGAGCA+CGG | + | chr3.2:92796053-92796072 | MS.gene68770:intron | 40.0% | |
AATTGGCGTAGACTAACTCA+AGG | - | chr3.2:92796788-92796807 | None:intergenic | 40.0% | |
ACACAACAAATCAACCATGG+AGG | + | chr3.2:92795777-92795796 | MS.gene68770:intron | 40.0% | |
ACGCGCATTTCGACTATAAT+TGG | + | chr3.2:92795500-92795519 | MS.gene68770:intron | 40.0% | |
ACGTCACAAACCATCAATTG+TGG | + | chr3.2:92796819-92796838 | MS.gene68770:CDS | 40.0% | |
AGGGCAATTCGTGTATTTAG+TGG | + | chr3.2:92795060-92795079 | MS.gene68770:intron | 40.0% | |
AGGGCTGATGTTAACTTTGA+AGG | + | chr3.2:92795252-92795271 | MS.gene68770:intron | 40.0% | |
ATAAACTGGCACAGCTATCA+AGG | - | chr3.2:92793059-92793078 | None:intergenic | 40.0% | |
ATGAGTAACACTGCCATGTT+TGG | - | chr3.2:92793561-92793580 | None:intergenic | 40.0% | |
ATTGTTGTCGTAAACGCCAT+CGG | - | chr3.2:92792652-92792671 | None:intergenic | 40.0% | |
CAATATGCAGACAGTTACAG+GGG | + | chr3.2:92793946-92793965 | MS.gene68770:CDS | 40.0% | |
CAGTGACAATGCTGATGTTA+AGG | + | chr3.2:92793975-92793994 | MS.gene68770:CDS | 40.0% | |
CCATGTAAGATAAACCCAAG+GGG | - | chr3.2:92796917-92796936 | None:intergenic | 40.0% | |
CCTAACCCAAATGTTCTTGT+AGG | + | chr3.2:92797059-92797078 | MS.gene68770:CDS | 40.0% | |
CTGGATAGAAAGAAAGACTG+TGG | - | chr3.2:92795454-92795473 | None:intergenic | 40.0% | |
GAAGGGGTAATATTTGTCTG+AGG | + | chr3.2:92795040-92795059 | MS.gene68770:intron | 40.0% | |
GACAATGCTGATGTTAAGGA+TGG | + | chr3.2:92793979-92793998 | MS.gene68770:CDS | 40.0% | |
GAGGTGGTTACTGAGAAATA+TGG | + | chr3.2:92796019-92796038 | MS.gene68770:intron | 40.0% | |
GATGAAATTCACGGACTTCA+AGG | - | chr3.2:92793450-92793469 | None:intergenic | 40.0% | |
GATGGACAATGTTGATGCAA+TGG | - | chr3.2:92795401-92795420 | None:intergenic | 40.0% | |
GCCGGTGATAACATCAAATT+TGG | + | chr3.2:92792622-92792641 | MS.gene68770:CDS | 40.0% | |
GGCGCATTAATATATGTGGT+TGG | - | chr3.2:92797155-92797174 | None:intergenic | 40.0% | |
GGGCTGATGTTAACTTTGAA+GGG | + | chr3.2:92795253-92795272 | MS.gene68770:intron | 40.0% | |
GTACAGGACGAATTGTTATG+GGG | + | chr3.2:92795157-92795176 | MS.gene68770:intron | 40.0% | |
GTTCTTGTAGGAGCTATTGT+GGG | + | chr3.2:92797071-92797090 | MS.gene68770:CDS | 40.0% | |
TGAGGATGGTCCTTAATAGA+AGG | - | chr3.2:92796993-92797012 | None:intergenic | 40.0% | |
TGAGTGTAAAAGGTGGATGT+GGG | - | chr3.2:92794379-92794398 | None:intergenic | 40.0% | |
TGCAAAGCCGATGAAATTCA+CGG | - | chr3.2:92793459-92793478 | None:intergenic | 40.0% | |
TGTTAGTGCACAAACACTTC+GGG | + | chr3.2:92796851-92796870 | MS.gene68770:CDS | 40.0% | |
TGTTCTTGTAGGAGCTATTG+TGG | + | chr3.2:92797070-92797089 | MS.gene68770:CDS | 40.0% | |
TTACGACAACAATGTTGTCG+TGG | + | chr3.2:92792659-92792678 | MS.gene68770:CDS | 40.0% | |
TTGAGTGTAAAAGGTGGATG+TGG | - | chr3.2:92794380-92794399 | None:intergenic | 40.0% | |
! | ATATCATATGGGCTATGGCA+TGG | + | chr3.2:92794342-92794361 | MS.gene68770:intron | 40.0% |
! | CATCAAATTTGGGTTTCCGA+TGG | + | chr3.2:92792633-92792652 | MS.gene68770:CDS | 40.0% |
! | CCTACAAGAACATTTGGGTT+AGG | - | chr3.2:92797062-92797081 | None:intergenic | 40.0% |
! | GGCTGATGTTAACTTTGAAG+GGG | + | chr3.2:92795254-92795273 | MS.gene68770:intron | 40.0% |
! | GTCTAACCGCATTTTTGTTC+AGG | + | chr3.2:92792783-92792802 | MS.gene68770:CDS | 40.0% |
! | GTTCTTTGAAGGACAACGTT+CGG | + | chr3.2:92792501-92792520 | MS.gene68770:CDS | 40.0% |
! | TAGAGTGTTTGATCACGTGA+AGG | - | chr3.2:92794185-92794204 | None:intergenic | 40.0% |
! | TATCATATGGGCTATGGCAT+GGG | + | chr3.2:92794343-92794362 | MS.gene68770:intron | 40.0% |
! | TTCTTTGAAGGACAACGTTC+GGG | + | chr3.2:92792502-92792521 | MS.gene68770:CDS | 40.0% |
! | TTTCAGGTAGTAGTGTGCAT+AGG | - | chr3.2:92796677-92796696 | None:intergenic | 40.0% |
! | TTTTGCCAGTTAGGACATGT+CGG | + | chr3.2:92794551-92794570 | MS.gene68770:intron | 40.0% |
!! | CATTTTAGGTGATAACCCCT+TGG | + | chr3.2:92796899-92796918 | MS.gene68770:CDS | 40.0% |
!! | GTCAGCTGAGTTTTGATGTT+TGG | - | chr3.2:92795632-92795651 | None:intergenic | 40.0% |
!!! | CCCATGTGTTTTTAGAGAGA+AGG | - | chr3.2:92796157-92796176 | None:intergenic | 40.0% |
AACCTCAGACCACAACTGTT+GGG | + | chr3.2:92793750-92793769 | MS.gene68770:CDS | 45.0% | |
AAGTCAGGAACAGCCTCATA+CGG | + | chr3.2:92795585-92795604 | MS.gene68770:intron | 45.0% | |
AATAACCGGGATCCGATGAT+CGG | - | chr3.2:92793891-92793910 | None:intergenic | 45.0% | |
ATGGAGGTCATGGATGATGT+TGG | + | chr3.2:92795944-92795963 | MS.gene68770:intron | 45.0% | |
ATGTTCATCCACTACCGTGA+AGG | - | chr3.2:92795847-92795866 | None:intergenic | 45.0% | |
CAAATCAACCATGGAGGCTT+TGG | + | chr3.2:92795783-92795802 | MS.gene68770:intron | 45.0% | |
CAACAGATTGCTTGCAAGGA+AGG | + | chr3.2:92797011-92797030 | MS.gene68770:CDS | 45.0% | |
CAGAAGACATGGACACAAAC+AGG | + | chr3.2:92793779-92793798 | MS.gene68770:CDS | 45.0% | |
CCACAACGTATTCATCATCG+TGG | + | chr3.2:92796957-92796976 | MS.gene68770:CDS | 45.0% | |
CCACGATGATGAATACGTTG+TGG | - | chr3.2:92796960-92796979 | None:intergenic | 45.0% | |
CCCCTTGGGTTTATCTTACA+TGG | + | chr3.2:92796914-92796933 | MS.gene68770:CDS | 45.0% | |
CTCCAGTCCACATAATGACA+CGG | - | chr3.2:92793412-92793431 | None:intergenic | 45.0% | |
CTGTTTGTGTCCATGTCTTC+TGG | - | chr3.2:92793781-92793800 | None:intergenic | 45.0% | |
GAATGCACATGATTATGCGG+AGG | + | chr3.2:92792459-92792478 | MS.gene68770:CDS | 45.0% | |
GAGTGAGTGAGAAAGAGAAG+TGG | - | chr3.2:92792874-92792893 | None:intergenic | 45.0% | |
GCGTTTCTGAGTTCATTAGG+AGG | - | chr3.2:92792712-92792731 | None:intergenic | 45.0% | |
GCTCTTAATCTTGTGGTCGT+GGG | - | chr3.2:92796465-92796484 | None:intergenic | 45.0% | |
GTTAGGACATGTCGGTGTAA+TGG | + | chr3.2:92794559-92794578 | MS.gene68770:intron | 45.0% | |
TACAACACTGATCTTACCGG+CGG | + | chr3.2:92792589-92792608 | MS.gene68770:CDS | 45.0% | |
TATCAAGGAAGAACGCACGA+TGG | - | chr3.2:92793044-92793063 | None:intergenic | 45.0% | |
TATGGGATGGCATATGACAG+AGG | + | chr3.2:92795984-92796003 | MS.gene68770:intron | 45.0% | |
TCCTCAACAGATTGCTTGCA+AGG | + | chr3.2:92797007-92797026 | MS.gene68770:CDS | 45.0% | |
TCCTTGCAAGCAATCTGTTG+AGG | - | chr3.2:92797011-92797030 | None:intergenic | 45.0% | |
TCGTGGAGTGTGATTGAGTT+TGG | + | chr3.2:92792676-92792695 | MS.gene68770:CDS | 45.0% | |
TGCAAGCAATCTGTTGAGGA+TGG | - | chr3.2:92797007-92797026 | None:intergenic | 45.0% | |
TGTTGTAAGTTGCTTCCACC+TGG | - | chr3.2:92796747-92796766 | None:intergenic | 45.0% | |
TTACACCGACATGTCCTAAC+TGG | - | chr3.2:92794559-92794578 | None:intergenic | 45.0% | |
TTCGATGGCATTCCGATCAT+CGG | + | chr3.2:92793876-92793895 | MS.gene68770:CDS | 45.0% | |
! | ACGTGTGGTGTGTTGTGTTT+TGG | - | chr3.2:92795692-92795711 | None:intergenic | 45.0% |
! | CATGGATGATGTTGGTGGAA+GGG | + | chr3.2:92795952-92795971 | MS.gene68770:intron | 45.0% |
! | CTACTACTGGTGATGCTGAT+TGG | + | chr3.2:92792421-92792440 | MS.gene68770:CDS | 45.0% |
! | GGAATTCGGGTTTGAGTGAT+GGG | + | chr3.2:92792560-92792579 | MS.gene68770:CDS | 45.0% |
! | TCATGGATGATGTTGGTGGA+AGG | + | chr3.2:92795951-92795970 | MS.gene68770:intron | 45.0% |
! | TCTTTGAAGGACAACGTTCG+GGG | + | chr3.2:92792503-92792522 | MS.gene68770:CDS | 45.0% |
! | TTCCGTGTCATTATGTGGAC+TGG | + | chr3.2:92793407-92793426 | MS.gene68770:intron | 45.0% |
!! | TGTCATTATGTGGACTGGAG+TGG | + | chr3.2:92793412-92793431 | MS.gene68770:intron | 45.0% |
!! | TTATGCGGAGGCATTATCGA+AGG | + | chr3.2:92792471-92792490 | MS.gene68770:CDS | 45.0% |
!! | TTCACGGTAGTGGATGAACA+TGG | + | chr3.2:92795846-92795865 | MS.gene68770:intron | 45.0% |
!!! | TTTATTTATTTATTACATTT+TGG | + | chr3.2:92792931-92792950 | MS.gene68770:intron | 5.0% |
AAAAAACAATTCGCCCCCCG+TGG | + | chr3.2:92796431-92796450 | MS.gene68770:intron | 50.0% | |
AAAAACAATTCGCCCCCCGT+GGG | + | chr3.2:92796432-92796451 | MS.gene68770:intron | 50.0% | |
AAAGGCAGATCACGCAGATC+TGG | + | chr3.2:92796095-92796114 | MS.gene68770:intron | 50.0% | |
AAGGCAGATCACGCAGATCT+GGG | + | chr3.2:92796096-92796115 | MS.gene68770:intron | 50.0% | |
AATTGTTATGGGGAGCCGCA+TGG | + | chr3.2:92795167-92795186 | MS.gene68770:intron | 50.0% | |
ACAGAAGTGGCGTGGGAATT+CGG | + | chr3.2:92792546-92792565 | MS.gene68770:CDS | 50.0% | |
ACCAGAGAAGAGCAGTTGTC+GGG | + | chr3.2:92795895-92795914 | MS.gene68770:intron | 50.0% | |
ACGCTTTGGTCGCAATTCGT+TGG | + | chr3.2:92792728-92792747 | MS.gene68770:CDS | 50.0% | |
AGGAAGAGGAAGGAGTGAGT+AGG | - | chr3.2:92792904-92792923 | None:intergenic | 50.0% | |
AGGTGGCACAATAGCCTTCA+CGG | + | chr3.2:92795830-92795849 | MS.gene68770:intron | 50.0% | |
AGTAGCCCTCCTTAACCATG+CGG | - | chr3.2:92796203-92796222 | None:intergenic | 50.0% | |
ATCTGCCTTTCCCGACCATT+TGG | - | chr3.2:92796085-92796104 | None:intergenic | 50.0% | |
ATGGTTAAGGAGGGCTACTC+AGG | + | chr3.2:92796204-92796223 | MS.gene68770:CDS | 50.0% | |
CAACCTCAGACCACAACTGT+TGG | + | chr3.2:92793749-92793768 | MS.gene68770:CDS | 50.0% | |
CACAATAGCCTTCACGGTAG+TGG | + | chr3.2:92795836-92795855 | MS.gene68770:intron | 50.0% | |
CACGTGATCCCGACACATAA+TGG | + | chr3.2:92794871-92794890 | MS.gene68770:intron | 50.0% | |
CATCGAAGAAGCAGCAAGTG+CGG | - | chr3.2:92793863-92793882 | None:intergenic | 50.0% | |
CCATCCGCGGATATTGACAA+AGG | + | chr3.2:92795416-92795435 | MS.gene68770:intron | 50.0% | |
CCTCAACGTTCTTGTCTCCA+AGG | + | chr3.2:92796321-92796340 | MS.gene68770:CDS | 50.0% | |
CCTCCATCGTTCAGATCTGA+CGG | - | chr3.2:92795931-92795950 | None:intergenic | 50.0% | |
CCTTGGAGACAAGAACGTTG+AGG | - | chr3.2:92796324-92796343 | None:intergenic | 50.0% | |
CCTTTGTCAATATCCGCGGA+TGG | - | chr3.2:92795419-92795438 | None:intergenic | 50.0% | |
CGGACTTCAAGGATACGAAC+TGG | - | chr3.2:92793439-92793458 | None:intergenic | 50.0% | |
CTCTACCAACTGAGCTAGAC+GGG | + | chr3.2:92796491-92796510 | MS.gene68770:intron | 50.0% | |
CTGAATTTGTGCTGCACGTG+TGG | - | chr3.2:92795707-92795726 | None:intergenic | 50.0% | |
CTTGTAGGAGCTATTGTGGG+AGG | + | chr3.2:92797074-92797093 | MS.gene68770:CDS | 50.0% | |
GACCAGAGAAGAGCAGTTGT+CGG | + | chr3.2:92795894-92795913 | MS.gene68770:intron | 50.0% | |
GAGGTCATGGATGATGTTGG+TGG | + | chr3.2:92795947-92795966 | MS.gene68770:intron | 50.0% | |
GATCTGAACGATGGAGGTCA+TGG | + | chr3.2:92795934-92795953 | MS.gene68770:intron | 50.0% | |
GCATCAACATTGTCCATCCG+CGG | + | chr3.2:92795403-92795422 | MS.gene68770:intron | 50.0% | |
GCGCAAGGCTCTTAATCTTG+TGG | - | chr3.2:92796472-92796491 | None:intergenic | 50.0% | |
GCTCTACCAACTGAGCTAGA+CGG | + | chr3.2:92796490-92796509 | MS.gene68770:intron | 50.0% | |
GGACTCATATACAGACCAGG+TGG | + | chr3.2:92796729-92796748 | MS.gene68770:CDS | 50.0% | |
GGCTCTTAATCTTGTGGTCG+TGG | - | chr3.2:92796466-92796485 | None:intergenic | 50.0% | |
GGGCGATTACCTTGACATTG+GGG | + | chr3.2:92796175-92796194 | MS.gene68770:intron | 50.0% | |
GGGGCGATTACCTTGACATT+GGG | + | chr3.2:92796174-92796193 | MS.gene68770:intron | 50.0% | |
GGTCTGTATATGAGTCCACC+AGG | - | chr3.2:92796726-92796745 | None:intergenic | 50.0% | |
TCACACATCGAGTACACTCC+TGG | + | chr3.2:92796705-92796724 | MS.gene68770:CDS | 50.0% | |
TCTTGTTCACCATGTCGCAC+CGG | + | chr3.2:92795529-92795548 | MS.gene68770:intron | 50.0% | |
TGGAAGGGTCATGGTGGTAT+GGG | + | chr3.2:92795967-92795986 | MS.gene68770:intron | 50.0% | |
TGGGGCGATTACCTTGACAT+TGG | + | chr3.2:92796173-92796192 | MS.gene68770:intron | 50.0% | |
TTGACTCACTCACTCACGGA+CGG | + | chr3.2:92792831-92792850 | MS.gene68770:intron | 50.0% | |
! | ACAGAGGCATGATGGTAGTG+AGG | + | chr3.2:92796000-92796019 | MS.gene68770:intron | 50.0% |
! | ACGTTCGGGGTTTTTACCAG+AGG | + | chr3.2:92792516-92792535 | MS.gene68770:CDS | 50.0% |
! | ATCAACCATGGAGGCTTTGG+TGG | + | chr3.2:92795786-92795805 | MS.gene68770:intron | 50.0% |
! | ATTCGGGTTTGAGTGATGGG+TGG | + | chr3.2:92792563-92792582 | MS.gene68770:CDS | 50.0% |
! | CAACAGTTGTGGTCTGAGGT+TGG | - | chr3.2:92793751-92793770 | None:intergenic | 50.0% |
! | CTACTGGTGATGCTGATTGG+AGG | + | chr3.2:92792424-92792443 | MS.gene68770:CDS | 50.0% |
! | GGCATATGACAGAGGCATGA+TGG | + | chr3.2:92795992-92796011 | MS.gene68770:intron | 50.0% |
! | GGGAATTCGGGTTTGAGTGA+TGG | + | chr3.2:92792559-92792578 | MS.gene68770:CDS | 50.0% |
! | GGTGGACTCATATACAGACC+AGG | + | chr3.2:92796726-92796745 | MS.gene68770:CDS | 50.0% |
! | TGATGTTGGTGGAAGGGTCA+TGG | + | chr3.2:92795958-92795977 | MS.gene68770:intron | 50.0% |
! | TGGGTTGACTCACTCACTCA+CGG | + | chr3.2:92792827-92792846 | MS.gene68770:intron | 50.0% |
!! | ACGGTAGTGGATGAACATGG+TGG | + | chr3.2:92795849-92795868 | MS.gene68770:intron | 50.0% |
!! | GTAGTGGATGAACATGGTGG+AGG | + | chr3.2:92795852-92795871 | MS.gene68770:intron | 50.0% |
AAAACAATTCGCCCCCCGTG+GGG | + | chr3.2:92796433-92796452 | MS.gene68770:intron | 55.0% | |
AAGGTGTGCAGTGCCGTATG+AGG | - | chr3.2:92795601-92795620 | None:intergenic | 55.0% | |
ACCAGAGACAGAAGTGGCGT+GGG | + | chr3.2:92792539-92792558 | MS.gene68770:CDS | 55.0% | |
ACGGTGCGATCCAAATGGTC+GGG | + | chr3.2:92796072-92796091 | MS.gene68770:intron | 55.0% | |
AGAGCACGGTGCGATCCAAA+TGG | + | chr3.2:92796067-92796086 | MS.gene68770:intron | 55.0% | |
AGGCAGATCACGCAGATCTG+GGG | + | chr3.2:92796097-92796116 | MS.gene68770:intron | 55.0% | |
AGGGTCATGGTGGTATGGGA+TGG | + | chr3.2:92795971-92795990 | MS.gene68770:intron | 55.0% | |
ATTGGGGAGCCGCATGGTTA+AGG | + | chr3.2:92796191-92796210 | MS.gene68770:intron | 55.0% | |
CACATCGAGTACACTCCTGG+TGG | + | chr3.2:92796708-92796727 | MS.gene68770:CDS | 55.0% | |
CACGGTGCGATCCAAATGGT+CGG | + | chr3.2:92796071-92796090 | MS.gene68770:intron | 55.0% | |
CACTTCTGTCTCTGGTCCTC+TGG | - | chr3.2:92792535-92792554 | None:intergenic | 55.0% | |
CAGAAGTGGCGTGGGAATTC+GGG | + | chr3.2:92792547-92792566 | MS.gene68770:CDS | 55.0% | |
CAGACCACAACTGTTGGGAG+AGG | + | chr3.2:92793755-92793774 | MS.gene68770:CDS | 55.0% | |
CAGAGGACCAGAGACAGAAG+TGG | + | chr3.2:92792533-92792552 | MS.gene68770:CDS | 55.0% | |
CCACCGTCAGATCTGAACGA+TGG | + | chr3.2:92795925-92795944 | MS.gene68770:intron | 55.0% | |
CCAGAGAAGAGCAGTTGTCG+GGG | + | chr3.2:92795896-92795915 | MS.gene68770:intron | 55.0% | |
CCATCGTTCAGATCTGACGG+TGG | - | chr3.2:92795928-92795947 | None:intergenic | 55.0% | |
CCGTCAGATCTGAACGATGG+AGG | + | chr3.2:92795928-92795947 | MS.gene68770:intron | 55.0% | |
CTCCCAACAGTTGTGGTCTG+AGG | - | chr3.2:92793755-92793774 | None:intergenic | 55.0% | |
CTGCTCTTCTCTGGTCACTG+CGG | - | chr3.2:92795890-92795909 | None:intergenic | 55.0% | |
GCATAGGAAGCTCTCTGCTG+AGG | - | chr3.2:92796661-92796680 | None:intergenic | 55.0% | |
GCATTCCGATCATCGGATCC+CGG | + | chr3.2:92793883-92793902 | MS.gene68770:CDS | 55.0% | |
GCGATCCAAATGGTCGGGAA+AGG | + | chr3.2:92796077-92796096 | MS.gene68770:intron | 55.0% | |
GGTTGGGACAACAAGCATGC+TGG | + | chr3.2:92796298-92796317 | MS.gene68770:CDS | 55.0% | |
GTATACCCACGCGCCAAACA+TGG | + | chr3.2:92793545-92793564 | MS.gene68770:intron | 55.0% | |
GTGGAAGGGTCATGGTGGTA+TGG | + | chr3.2:92795966-92795985 | MS.gene68770:intron | 55.0% | |
GTGTCTTATCCGGTGCGACA+TGG | - | chr3.2:92795541-92795560 | None:intergenic | 55.0% | |
TTGGGAGAGGCCAGAAGACA+TGG | + | chr3.2:92793768-92793787 | MS.gene68770:CDS | 55.0% | |
! | AACAGCCCGTCTAGCTCAGT+TGG | - | chr3.2:92796499-92796518 | None:intergenic | 55.0% |
! | AACCATGGAGGCTTTGGTGG+TGG | + | chr3.2:92795789-92795808 | MS.gene68770:intron | 55.0% |
! | ACCATGGAGGCTTTGGTGGT+GGG | + | chr3.2:92795790-92795809 | MS.gene68770:intron | 55.0% |
! | CGCACTTGCTGCTTCTTCGA+TGG | + | chr3.2:92793861-92793880 | MS.gene68770:CDS | 55.0% |
! | GAGGCATGATGGTAGTGAGG+TGG | + | chr3.2:92796003-92796022 | MS.gene68770:intron | 55.0% |
! | GATGAACATGGTGGAGGCTC+CGG | + | chr3.2:92795858-92795877 | MS.gene68770:intron | 55.0% |
! | TGTTGGTGGAAGGGTCATGG+TGG | + | chr3.2:92795961-92795980 | MS.gene68770:intron | 55.0% |
!! | AGCTCAGTTGGTAGAGCGCA+AGG | - | chr3.2:92796487-92796506 | None:intergenic | 55.0% |
AACCCAGCTTCCGATGTCGC+CGG | + | chr3.2:92793826-92793845 | MS.gene68770:CDS | 60.0% | |
ACACTGCCATGTTTGGCGCG+TGG | - | chr3.2:92793554-92793573 | None:intergenic | 60.0% | |
CACTGCCATGTTTGGCGCGT+GGG | - | chr3.2:92793553-92793572 | None:intergenic | 60.0% | |
CATGCGGCTCCCCAATGTCA+AGG | - | chr3.2:92796187-92796206 | None:intergenic | 60.0% | |
CCCCGACAACTGCTCTTCTC+TGG | - | chr3.2:92795899-92795918 | None:intergenic | 60.0% | |
CGAAGAAGCAGCAAGTGCGG+CGG | - | chr3.2:92793860-92793879 | None:intergenic | 60.0% | |
CGACTCAGATCTGGGTCAGG+TGG | + | chr3.2:92795813-92795832 | MS.gene68770:intron | 60.0% | |
CTGGCCTCTCCCAACAGTTG+TGG | - | chr3.2:92793762-92793781 | None:intergenic | 60.0% | |
CTTGACATTGGGGAGCCGCA+TGG | + | chr3.2:92796185-92796204 | MS.gene68770:intron | 60.0% | |
GACCAGAGACAGAAGTGGCG+TGG | + | chr3.2:92792538-92792557 | MS.gene68770:CDS | 60.0% | |
GCGACATCGGAAGCTGGGTT+AGG | - | chr3.2:92793826-92793845 | None:intergenic | 60.0% | |
GGAGCTATTGTGGGAGGACC+TGG | + | chr3.2:92797080-92797099 | MS.gene68770:CDS | 60.0% | |
GGGAGCCGCATGGTTAAGGA+GGG | + | chr3.2:92796195-92796214 | MS.gene68770:intron | 60.0% | |
TCCCACGCCACTTCTGTCTC+TGG | - | chr3.2:92792543-92792562 | None:intergenic | 60.0% | |
!! | AAGTGCGGCGGCTGTTTCTC+CGG | - | chr3.2:92793848-92793867 | None:intergenic | 60.0% |
!! | GGCTGTTTCTCCGGCGACAT+CGG | - | chr3.2:92793839-92793858 | None:intergenic | 60.0% |
!! | GTGGTGGGCGACTCAGATCT+GGG | + | chr3.2:92795805-92795824 | MS.gene68770:intron | 60.0% |
ACCGGCGGTTACTACGACGC+CGG | + | chr3.2:92792604-92792623 | MS.gene68770:CDS | 65.0% | |
ACCGGCGTCGTAGTAACCGC+CGG | - | chr3.2:92792608-92792627 | None:intergenic | 65.0% | |
CTCCGGCGACATCGGAAGCT+GGG | - | chr3.2:92793831-92793850 | None:intergenic | 65.0% | |
GCCCACCACCAAAGCCTCCA+TGG | - | chr3.2:92795794-92795813 | None:intergenic | 65.0% | |
GGGCGACTCAGATCTGGGTC+AGG | + | chr3.2:92795810-92795829 | MS.gene68770:intron | 65.0% | |
GGGGAGCCGCATGGTTAAGG+AGG | + | chr3.2:92796194-92796213 | MS.gene68770:intron | 65.0% | |
TCTCCGGCGACATCGGAAGC+TGG | - | chr3.2:92793832-92793851 | None:intergenic | 65.0% | |
! | GAACATGGTGGAGGCTCCGG+TGG | + | chr3.2:92795861-92795880 | MS.gene68770:intron | 65.0% |
!! | GGTGGTGGGCGACTCAGATC+TGG | + | chr3.2:92795804-92795823 | MS.gene68770:intron | 65.0% |
GGTCGTGGGTTCGAGCCCCA+CGG | - | chr3.2:92796451-92796470 | None:intergenic | 70.0% | |
GTCGTGGGTTCGAGCCCCAC+GGG | - | chr3.2:92796450-92796469 | None:intergenic | 70.0% | |
TCGTGGGTTCGAGCCCCACG+GGG | - | chr3.2:92796449-92796468 | None:intergenic | 70.0% | |
! | CATGGTGGAGGCTCCGGTGG+CGG | + | chr3.2:92795864-92795883 | MS.gene68770:intron | 70.0% |
CGTGGGTTCGAGCCCCACGG+GGG | - | chr3.2:92796448-92796467 | None:intergenic | 75.0% | |
CTGGTCACTGCGGCCGCCAC+CGG | - | chr3.2:92795880-92795899 | None:intergenic | 75.0% | |
GTGGGTTCGAGCCCCACGGG+GGG | - | chr3.2:92796447-92796466 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 92792388 | 92797211 | 92792388 | ID=MS.gene68770 |
chr3.2 | mRNA | 92792388 | 92797211 | 92792388 | ID=MS.gene68770.t1;Parent=MS.gene68770 |
chr3.2 | exon | 92792388 | 92792804 | 92792388 | ID=MS.gene68770.t1.exon1;Parent=MS.gene68770.t1 |
chr3.2 | CDS | 92792388 | 92792804 | 92792388 | ID=cds.MS.gene68770.t1;Parent=MS.gene68770.t1 |
chr3.2 | exon | 92793739 | 92794042 | 92793739 | ID=MS.gene68770.t1.exon2;Parent=MS.gene68770.t1 |
chr3.2 | CDS | 92793739 | 92794042 | 92793739 | ID=cds.MS.gene68770.t1;Parent=MS.gene68770.t1 |
chr3.2 | exon | 92796200 | 92796342 | 92796200 | ID=MS.gene68770.t1.exon3;Parent=MS.gene68770.t1 |
chr3.2 | CDS | 92796200 | 92796342 | 92796200 | ID=cds.MS.gene68770.t1;Parent=MS.gene68770.t1 |
chr3.2 | exon | 92796615 | 92797211 | 92796615 | ID=MS.gene68770.t1.exon4;Parent=MS.gene68770.t1 |
chr3.2 | CDS | 92796615 | 92797211 | 92796615 | ID=cds.MS.gene68770.t1;Parent=MS.gene68770.t1 |
Gene Sequence |
Protein sequence |