Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71826.t1 | XP_003592650.1 | 98.3 | 712 | 11 | 1 | 1 | 711 | 20 | 731 | 0.00E+00 | 1263.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71826.t1 | Q9ZPV5 | 68.7 | 559 | 172 | 2 | 39 | 594 | 72 | 630 | 1.0e-208 | 728.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71826.t1 | G7ID95 | 98.3 | 712 | 11 | 1 | 1 | 711 | 20 | 731 | 0.0e+00 | 1263.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049207 | MS.gene71826 | 0.806003 | 1.02E-49 | -1.69E-46 |
MS.gene049666 | MS.gene71826 | 0.821804 | 3.32E-53 | -1.69E-46 |
MS.gene049824 | MS.gene71826 | 0.835918 | 1.27E-56 | -1.69E-46 |
MS.gene049825 | MS.gene71826 | 0.852301 | 5.05E-61 | -1.69E-46 |
MS.gene049873 | MS.gene71826 | 0.846705 | 1.84E-59 | -1.69E-46 |
MS.gene050277 | MS.gene71826 | 0.80782 | 4.19E-50 | -1.69E-46 |
MS.gene050303 | MS.gene71826 | 0.846726 | 1.81E-59 | -1.69E-46 |
MS.gene050427 | MS.gene71826 | 0.822777 | 1.98E-53 | -1.69E-46 |
MS.gene050885 | MS.gene71826 | 0.816631 | 5.01E-52 | -1.69E-46 |
MS.gene051330 | MS.gene71826 | 0.818478 | 1.92E-52 | -1.69E-46 |
MS.gene05134 | MS.gene71826 | 0.80473 | 1.88E-49 | -1.69E-46 |
MS.gene051451 | MS.gene71826 | 0.815154 | 1.07E-51 | -1.69E-46 |
MS.gene051700 | MS.gene71826 | 0.828527 | 8.55E-55 | -1.69E-46 |
MS.gene05188 | MS.gene71826 | 0.834854 | 2.36E-56 | -1.69E-46 |
MS.gene051975 | MS.gene71826 | 0.818864 | 1.57E-52 | -1.69E-46 |
MS.gene052584 | MS.gene71826 | 0.810711 | 1.01E-50 | -1.69E-46 |
MS.gene052947 | MS.gene71826 | 0.817421 | 3.33E-52 | -1.69E-46 |
MS.gene053080 | MS.gene71826 | 0.831316 | 1.79E-55 | -1.69E-46 |
MS.gene053122 | MS.gene71826 | 0.809971 | 1.45E-50 | -1.69E-46 |
MS.gene053226 | MS.gene71826 | 0.849949 | 2.33E-60 | -1.69E-46 |
MS.gene053230 | MS.gene71826 | 0.801943 | 7.09E-49 | -1.69E-46 |
MS.gene053294 | MS.gene71826 | 0.814171 | 1.76E-51 | -1.69E-46 |
MS.gene05365 | MS.gene71826 | 0.819992 | 8.68E-53 | -1.69E-46 |
MS.gene054328 | MS.gene71826 | 0.811602 | 6.45E-51 | -1.69E-46 |
MS.gene055555 | MS.gene71826 | 0.836766 | 7.72E-57 | -1.69E-46 |
MS.gene055778 | MS.gene71826 | 0.818784 | 1.64E-52 | -1.69E-46 |
MS.gene055808 | MS.gene71826 | 0.888813 | 4.23E-73 | -1.69E-46 |
MS.gene056091 | MS.gene71826 | 0.886 | 5.00E-72 | -1.69E-46 |
MS.gene056215 | MS.gene71826 | 0.826285 | 2.95E-54 | -1.69E-46 |
MS.gene056403 | MS.gene71826 | 0.873352 | 1.57E-67 | -1.69E-46 |
MS.gene05659 | MS.gene71826 | 0.815563 | 8.67E-52 | -1.69E-46 |
MS.gene056605 | MS.gene71826 | 0.866601 | 2.53E-65 | -1.69E-46 |
MS.gene056631 | MS.gene71826 | 0.840114 | 1.06E-57 | -1.69E-46 |
MS.gene05689 | MS.gene71826 | 0.878738 | 2.20E-69 | -1.69E-46 |
MS.gene056986 | MS.gene71826 | 0.821145 | 4.72E-53 | -1.69E-46 |
MS.gene057555 | MS.gene71826 | 0.801342 | 9.42E-49 | -1.69E-46 |
MS.gene057705 | MS.gene71826 | 0.804045 | 2.61E-49 | -1.69E-46 |
MS.gene058037 | MS.gene71826 | 0.810329 | 1.22E-50 | -1.69E-46 |
MS.gene058498 | MS.gene71826 | 0.813694 | 2.25E-51 | -1.69E-46 |
MS.gene058908 | MS.gene71826 | 0.819975 | 8.76E-53 | -1.69E-46 |
MS.gene058911 | MS.gene71826 | 0.830127 | 3.50E-55 | -1.69E-46 |
MS.gene05953 | MS.gene71826 | 0.828238 | 1.00E-54 | -1.69E-46 |
MS.gene05954 | MS.gene71826 | 0.869517 | 2.92E-66 | -1.69E-46 |
MS.gene059830 | MS.gene71826 | 0.801994 | 6.93E-49 | -1.69E-46 |
MS.gene059935 | MS.gene71826 | 0.877894 | 4.36E-69 | -1.69E-46 |
MS.gene06001 | MS.gene71826 | 0.843678 | 1.21E-58 | -1.69E-46 |
MS.gene06011 | MS.gene71826 | 0.809764 | 1.61E-50 | -1.69E-46 |
MS.gene060365 | MS.gene71826 | 0.807436 | 5.06E-50 | -1.69E-46 |
MS.gene060429 | MS.gene71826 | 0.897405 | 1.45E-76 | -1.69E-46 |
MS.gene060572 | MS.gene71826 | 0.808921 | 2.44E-50 | -1.69E-46 |
MS.gene060586 | MS.gene71826 | 0.843513 | 1.34E-58 | -1.69E-46 |
MS.gene060669 | MS.gene71826 | 0.813178 | 2.92E-51 | -1.69E-46 |
MS.gene060763 | MS.gene71826 | 0.823457 | 1.37E-53 | -1.69E-46 |
MS.gene060830 | MS.gene71826 | 0.910792 | 1.26E-82 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 134 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCAGGTGTCTCTTCATTTC+TGG | 0.080261 | 1.3:-75328564 | MS.gene71826:intron |
TGCATAGATGATTGCTTTAA+AGG | 0.165421 | 1.3:-75328466 | MS.gene71826:CDS |
TGCAAATCAATTAAAGAAAA+TGG | 0.219753 | 1.3:-75329391 | MS.gene71826:CDS |
ACCAGTATCTATGCTCCTTT+TGG | 0.248004 | 1.3:-75327709 | MS.gene71826:CDS |
TTGTTGAAGCTTCCTGCTTC+TGG | 0.303506 | 1.3:-75329202 | MS.gene71826:CDS |
TCAGGTGTCTCTTCATTTCT+GGG | 0.315570 | 1.3:-75328563 | MS.gene71826:intron |
GAGTTACTCTGTTGGGTTCA+TGG | 0.318367 | 1.3:-75327436 | MS.gene71826:CDS |
TAAAGTTATAACCACTTCTA+TGG | 0.321812 | 1.3:-75329425 | MS.gene71826:CDS |
AAAATATTCTTCATTGTTGT+TGG | 0.346316 | 1.3:-75329032 | MS.gene71826:CDS |
TCTCTTCATTTCTGGGGTAC+TGG | 0.358919 | 1.3:-75328556 | MS.gene71826:CDS |
GAGCAATACTTGTCATTTCC+AGG | 0.362820 | 1.3:+75326329 | None:intergenic |
AGTTCCATCCACGTTCTCTT+TGG | 0.366087 | 1.3:+75326376 | None:intergenic |
TCATTAACTCTCTTGAGCTT+TGG | 0.367280 | 1.3:-75327905 | MS.gene71826:CDS |
ACAAAACAATGGAGGACTTA+TGG | 0.370348 | 1.3:-75329145 | MS.gene71826:CDS |
AGACAAAGCATAAAACAAAA+AGG | 0.374855 | 1.3:-75325980 | MS.gene71826:CDS |
CTGTCCTAAAAGCCCTCATC+AGG | 0.374975 | 1.3:+75329347 | None:intergenic |
GATGATGCCGCAGGATCATT+AGG | 0.378915 | 1.3:+75327160 | None:intergenic |
CACTGTGGAGTTACTCTGTT+GGG | 0.380617 | 1.3:-75327443 | MS.gene71826:CDS |
CAAGGTAGGACTTCACAATA+TGG | 0.381844 | 1.3:+75329122 | None:intergenic |
AAAATTTCCAGTGTTCTTGT+TGG | 0.383029 | 1.3:-75326470 | MS.gene71826:intron |
GTACCTTGATATATTTCCTT+AGG | 0.386131 | 1.3:+75328993 | None:intergenic |
CGGCTAGGTACTTTCCCCTT+AGG | 0.413546 | 1.3:-75327785 | MS.gene71826:CDS |
CATTTCTGGGGTACTGGTGG+AGG | 0.417756 | 1.3:-75328550 | MS.gene71826:CDS |
CTTTGCCAATGCCTCCTGTA+GGG | 0.419106 | 1.3:+75327655 | None:intergenic |
TCTTCGAAACCTTTCAACTT+TGG | 0.426560 | 1.3:+75327365 | None:intergenic |
GTTTCACAGCATTTACGAAA+TGG | 0.429053 | 1.3:+75328416 | None:intergenic |
GCAGAAGGGCTGTCGCTTGA+AGG | 0.432094 | 1.3:+75326053 | None:intergenic |
AACTGCGTCATTGAACTTCT+CGG | 0.432785 | 1.3:-75328370 | MS.gene71826:CDS |
GTTGACTGTACTTAATGAAA+TGG | 0.436589 | 1.3:-75329242 | MS.gene71826:CDS |
GCAAATCAATTAAAGAAAAT+GGG | 0.446925 | 1.3:-75329390 | MS.gene71826:CDS |
CCCTTAGGTTGAGATGTATC+CGG | 0.448152 | 1.3:-75327770 | MS.gene71826:CDS |
TAGATACTGGTACAAAAGAA+TGG | 0.450220 | 1.3:+75327721 | None:intergenic |
TTTAGGACAGCATGCCACTA+TGG | 0.450538 | 1.3:-75329334 | MS.gene71826:CDS |
TCACTGAACTTAAGCAGATC+CGG | 0.454118 | 1.3:+75330579 | None:intergenic |
TGATTTACGCAGCATATTGA+AGG | 0.459394 | 1.3:-75327628 | MS.gene71826:intron |
TTGTGCATCTGTATTGGATC+TGG | 0.460491 | 1.3:-75328490 | MS.gene71826:CDS |
TTTAGCTCATCCTGGTTACC+TGG | 0.468220 | 1.3:-75326347 | MS.gene71826:CDS |
CAGCAATCTGGTTCAACATC+CGG | 0.468912 | 1.3:+75327751 | None:intergenic |
CGCAGGATCATTAGGTAGAA+AGG | 0.471731 | 1.3:+75327168 | None:intergenic |
TCAAGCGACAGCCCTTCTGC+CGG | 0.472007 | 1.3:-75326050 | MS.gene71826:CDS |
AGGAATAAATCTCACACCTA+AGG | 0.472641 | 1.3:-75325951 | None:intergenic |
AAGTTGCGCAACCTCACAAT+TGG | 0.474304 | 1.3:+75327399 | None:intergenic |
TCCAAAAGGAGCATAGATAC+TGG | 0.475479 | 1.3:+75327708 | None:intergenic |
CCACTTCTATGGTTGATTTG+TGG | 0.479032 | 1.3:-75329414 | MS.gene71826:CDS |
CTTGTCATTTCCAGGTAACC+AGG | 0.479894 | 1.3:+75326337 | None:intergenic |
CTTCATTTCTGGGGTACTGG+TGG | 0.480769 | 1.3:-75328553 | MS.gene71826:CDS |
TGCGGTTCGTTCCCTGATGA+GGG | 0.483874 | 1.3:-75329359 | MS.gene71826:CDS |
ATGAATAGACACGAAACAAC+AGG | 0.485209 | 1.3:+75328520 | None:intergenic |
AATGGGTAGAAGCAGCAATC+TGG | 0.490303 | 1.3:+75327739 | None:intergenic |
TGATGATGTTGTGGAGGACT+TGG | 0.492880 | 1.3:-75326105 | MS.gene71826:CDS |
TGGAAGAAAAGAGATCATAA+TGG | 0.493687 | 1.3:-75329179 | MS.gene71826:CDS |
ATGCGGTTCGTTCCCTGATG+AGG | 0.495163 | 1.3:-75329360 | MS.gene71826:CDS |
AAGTGCATCCCTTAAAATCA+TGG | 0.500234 | 1.3:+75328294 | None:intergenic |
AGAGAGTTGTGCATCTGTAT+TGG | 0.501253 | 1.3:-75328496 | MS.gene71826:CDS |
CAAGCGACAGCCCTTCTGCC+GGG | 0.504148 | 1.3:-75326049 | MS.gene71826:CDS |
GCTCCTAAGGAAATATATCA+AGG | 0.505109 | 1.3:-75328996 | MS.gene71826:intron |
TCCGGATACATCTCAACCTA+AGG | 0.506348 | 1.3:+75327769 | None:intergenic |
CTGCTGCATTTAGCTCATCC+TGG | 0.510196 | 1.3:-75326355 | MS.gene71826:CDS |
GCAAATTGACCAAAGTTGAA+AGG | 0.512230 | 1.3:-75327374 | MS.gene71826:CDS |
ACGACTCATTAAAGGAATCC+AGG | 0.512258 | 1.3:-75326581 | MS.gene71826:intron |
TTGAAGCTTCCTGCTTCTGG+TGG | 0.513192 | 1.3:-75329199 | MS.gene71826:CDS |
CAACAGCCTACTGAACCAAA+AGG | 0.514963 | 1.3:-75326167 | MS.gene71826:CDS |
AGATACTGGTACAAAAGAAT+GGG | 0.517124 | 1.3:+75327722 | None:intergenic |
CTCCACAACATCATCATCAA+TGG | 0.522343 | 1.3:+75326112 | None:intergenic |
TTCTGTGGTTGAAGAACTTG+CGG | 0.526193 | 1.3:-75327475 | MS.gene71826:CDS |
GTGGATGATGACATGGAAGA+TGG | 0.527004 | 1.3:-75329514 | MS.gene71826:CDS |
CAGAGTAACTCCACAGTGCT+AGG | 0.529878 | 1.3:+75327448 | None:intergenic |
AATGCCCGTGTCTTAAGAGT+TGG | 0.530371 | 1.3:+75327516 | None:intergenic |
GAAATGGCAATTCAAAACAT+AGG | 0.534559 | 1.3:+75328432 | None:intergenic |
TTTGCCAATGCCTCCTGTAG+GGG | 0.535188 | 1.3:+75327656 | None:intergenic |
CAGTCATTTGATTCAAAATG+TGG | 0.535572 | 1.3:+75329089 | None:intergenic |
GGAGGATACTAAAGAGAATG+AGG | 0.540305 | 1.3:-75326402 | MS.gene71826:CDS |
CAGGTGTCTCTTCATTTCTG+GGG | 0.543367 | 1.3:-75328562 | MS.gene71826:CDS |
GCTTTGCCAATGCCTCCTGT+AGG | 0.545538 | 1.3:+75327654 | None:intergenic |
GCACTGTGGAGTTACTCTGT+TGG | 0.548474 | 1.3:-75327444 | MS.gene71826:CDS |
GATTGAAGCAAAGCAACATA+AGG | 0.549356 | 1.3:-75331278 | MS.gene71826:CDS |
ATATATTTCCTTAGGAGCGA+AGG | 0.556004 | 1.3:+75329001 | None:intergenic |
TCTCATCATCATCACCATAG+TGG | 0.557196 | 1.3:+75329320 | None:intergenic |
CACTGAACTTAAGCAGATCC+GGG | 0.560310 | 1.3:+75330580 | None:intergenic |
TGATATCATTTACTTTACAT+CGG | 0.560340 | 1.3:-75329057 | MS.gene71826:CDS |
TCATCTCCAGCATATCCAAA+AGG | 0.562573 | 1.3:+75327694 | None:intergenic |
CCGGATACATCTCAACCTAA+GGG | 0.564014 | 1.3:+75327770 | None:intergenic |
TTGCCAATGCCTCCTGTAGG+GGG | 0.564018 | 1.3:+75327657 | None:intergenic |
CCTAGCCGTGGGAACTAGAC+GGG | 0.565672 | 1.3:+75327800 | None:intergenic |
ATATTAGAGATTAATGTGGA+TGG | 0.567480 | 1.3:-75331346 | None:intergenic |
CTACTGAACCAAAAGGAAAG+AGG | 0.572500 | 1.3:-75326160 | MS.gene71826:CDS |
TGCCATTGATGATGATGTTG+TGG | 0.573586 | 1.3:-75326114 | MS.gene71826:CDS |
GGAATAAATCTCACACCTAA+GGG | 0.576466 | 1.3:-75325950 | None:intergenic |
GATGCCAAAGAGAACGTGGA+TGG | 0.579919 | 1.3:-75326380 | MS.gene71826:CDS |
AAAGGTTTCGAAGAGAAATG+AGG | 0.583015 | 1.3:-75327356 | MS.gene71826:CDS |
ACTGTACTTAATGAAATGGA+TGG | 0.588834 | 1.3:-75329238 | MS.gene71826:CDS |
TAAGACACGGGCATTTCAAG+AGG | 0.589841 | 1.3:-75327508 | MS.gene71826:CDS |
CTTTGCTTCAATCACAACCG+TGG | 0.591835 | 1.3:+75331288 | None:intergenic |
AAATGTGGAGAGCATTTCCA+AGG | 0.591878 | 1.3:+75329104 | None:intergenic |
CATGGAAGATGGAGAACCAC+AGG | 0.594124 | 1.3:-75329503 | MS.gene71826:CDS |
GATTATATTAGAGATTAATG+TGG | 0.595537 | 1.3:-75331350 | None:intergenic |
CATATTGTGAAGTCCTACCT+TGG | 0.595814 | 1.3:-75329121 | MS.gene71826:CDS |
TCAAGAAAAGATGATGCCGC+AGG | 0.596185 | 1.3:+75327151 | None:intergenic |
CCACAAATCAACCATAGAAG+TGG | 0.600691 | 1.3:+75329414 | None:intergenic |
TGAGAAGGCTATTGAGCATG+AGG | 0.603012 | 1.3:-75329476 | MS.gene71826:CDS |
CTTTCTACCTAATGATCCTG+CGG | 0.603597 | 1.3:-75327167 | MS.gene71826:CDS |
GTGGAGAGCATTTCCAAGGT+AGG | 0.605480 | 1.3:+75329108 | None:intergenic |
TGAGCATGAGGTTCAAGCAA+AGG | 0.611999 | 1.3:-75329464 | MS.gene71826:CDS |
AGAACCACAGGTAGATGAGA+AGG | 0.612954 | 1.3:-75329491 | MS.gene71826:CDS |
ATACTTTGATAGTGCACTAG+AGG | 0.618108 | 1.3:+75326638 | None:intergenic |
ACCTAGCCGTGGGAACTAGA+CGG | 0.618655 | 1.3:+75327799 | None:intergenic |
ATAGCCTTCTCATCTACCTG+TGG | 0.620098 | 1.3:+75329487 | None:intergenic |
AGAATCAGCAAGTGATGAGG+AGG | 0.621827 | 1.3:-75326420 | MS.gene71826:CDS |
GCAAGCCAACTCTTAAGACA+CGG | 0.624117 | 1.3:-75327521 | MS.gene71826:CDS |
CAACTGTCGAATGAAAATGA+AGG | 0.625145 | 1.3:+75328318 | None:intergenic |
TGAAGAATCAGCAAGTGATG+AGG | 0.631498 | 1.3:-75326423 | MS.gene71826:CDS |
CGTCATTGAACTTCTCGGAG+TGG | 0.634980 | 1.3:-75328365 | MS.gene71826:CDS |
CCCGTCTAGTTCCCACGGCT+AGG | 0.635585 | 1.3:-75327800 | MS.gene71826:CDS |
ATTTGATGACTACAAAACAA+TGG | 0.635609 | 1.3:-75329156 | MS.gene71826:CDS |
AAGGGGAAAGTACCTAGCCG+TGG | 0.636588 | 1.3:+75327788 | None:intergenic |
AAGGCGTGTTGATATGCAGT+CGG | 0.638450 | 1.3:+75328337 | None:intergenic |
GGAAGATGTGGATGATGACA+TGG | 0.639734 | 1.3:-75329521 | MS.gene71826:CDS |
CAGATTGTGAACTATAAGCA+CGG | 0.640362 | 1.3:+75327871 | None:intergenic |
TGAGGATGCCAAAGAGAACG+TGG | 0.646565 | 1.3:-75326384 | MS.gene71826:CDS |
AGGGGAAAGTACCTAGCCGT+GGG | 0.649443 | 1.3:+75327789 | None:intergenic |
AGAAAATGGGAGCTTAAATG+CGG | 0.652168 | 1.3:-75329377 | MS.gene71826:CDS |
CAAGCCAACTCTTAAGACAC+GGG | 0.654132 | 1.3:-75327520 | MS.gene71826:CDS |
AGTAGCCCGTCTAGTTCCCA+CGG | 0.654607 | 1.3:-75327805 | MS.gene71826:CDS |
AATAGAAAATCTTCAGCACA+AGG | 0.655625 | 1.3:-75331251 | MS.gene71826:intron |
TAGACACGAAACAACAGGAA+GGG | 0.657156 | 1.3:+75328525 | None:intergenic |
CGGATACATCTCAACCTAAG+GGG | 0.658910 | 1.3:+75327771 | None:intergenic |
CATTGATGATGATGTTGTGG+AGG | 0.661802 | 1.3:-75326111 | MS.gene71826:CDS |
AATGAGGCAGCTTATTCGCG+AGG | 0.672768 | 1.3:-75327340 | MS.gene71826:intron |
AGATGAATGATGATCAACAT+CGG | 0.678740 | 1.3:+75326019 | None:intergenic |
TGTCCTAAAAGCCCTCATCA+GGG | 0.678828 | 1.3:+75329348 | None:intergenic |
GTACTTGAAAGAGAATGACC+CGG | 0.684135 | 1.3:-75330598 | MS.gene71826:CDS |
TGATGACTACAAAACAATGG+AGG | 0.690281 | 1.3:-75329153 | MS.gene71826:CDS |
ATAGACACGAAACAACAGGA+AGG | 0.702686 | 1.3:+75328524 | None:intergenic |
TTGCGGAACACCTAGCACTG+TGG | 0.724336 | 1.3:-75327458 | MS.gene71826:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTACCTTTTATATATTTAT+TGG | - | chr1.3:75326609-75326628 | MS.gene71826:CDS | 10.0% |
!!! | TTACCTTTTATATATTTATT+GGG | - | chr1.3:75326610-75326629 | MS.gene71826:CDS | 10.0% |
!!! | TTTTTGACAATTTTATTTTA+TGG | - | chr1.3:75329294-75329313 | MS.gene71826:CDS | 10.0% |
!! | AAAAAAGGAAAAAGAAATAT+TGG | + | chr1.3:75327029-75327048 | None:intergenic | 15.0% |
!! | AAAAAGGAAAAAGAAATATT+GGG | + | chr1.3:75327028-75327047 | None:intergenic | 15.0% |
!! | AAAATTAAATTTGTAGTGAT+TGG | + | chr1.3:75327294-75327313 | None:intergenic | 15.0% |
!! | AAACTTATATTTAGCTATTA+AGG | + | chr1.3:75326393-75326412 | None:intergenic | 15.0% |
!! | AAATTAAGAATAGTATCATT+CGG | - | chr1.3:75328551-75328570 | MS.gene71826:CDS | 15.0% |
!! | CACTTGATATAATAAAATAA+AGG | + | chr1.3:75330512-75330531 | None:intergenic | 15.0% |
!! | TAAAATAAAGGAAAAGAAAA+TGG | + | chr1.3:75330500-75330519 | None:intergenic | 15.0% |
!! | TACAATTCTCAAATATAAAT+GGG | + | chr1.3:75330595-75330614 | None:intergenic | 15.0% |
!! | TGATAAAAGTAAAACATAAA+AGG | + | chr1.3:75330001-75330020 | None:intergenic | 15.0% |
!! | TTACAATTCTCAAATATAAA+TGG | + | chr1.3:75330596-75330615 | None:intergenic | 15.0% |
!!! | AAATTTTCTATCTTGATTAA+AGG | + | chr1.3:75327481-75327500 | None:intergenic | 15.0% |
!!! | TTAATCAAGATAGAAAATTT+TGG | - | chr1.3:75327481-75327500 | MS.gene71826:CDS | 15.0% |
!!! | TTATGTTTTACTTTTATCAT+TGG | - | chr1.3:75330002-75330021 | MS.gene71826:intron | 15.0% |
!! | AAAATATTCTTCATTGTTGT+TGG | - | chr1.3:75328260-75328279 | MS.gene71826:intron | 20.0% |
!! | AACAATGTAATGTAATGTAA+TGG | + | chr1.3:75326073-75326092 | None:intergenic | 20.0% |
!! | ACAATGTAATGTAATGTAAT+GGG | + | chr1.3:75326072-75326091 | None:intergenic | 20.0% |
!! | ATAAAACAAAAAGGTTGAAA+AGG | - | chr1.3:75331321-75331340 | MS.gene71826:CDS | 20.0% |
!! | GCAAATCAATTAAAGAAAAT+GGG | - | chr1.3:75327902-75327921 | MS.gene71826:CDS | 20.0% |
!! | TACATTAATTGAGATGAATA+TGG | - | chr1.3:75326801-75326820 | MS.gene71826:intron | 20.0% |
!! | TAGCCCAATAAATATATAAA+AGG | + | chr1.3:75326616-75326635 | None:intergenic | 20.0% |
!! | TATAGAAGTTTATTTGCTTA+AGG | + | chr1.3:75330332-75330351 | None:intergenic | 20.0% |
!! | TATATAACATAACAGCAAAA+AGG | + | chr1.3:75327570-75327589 | None:intergenic | 20.0% |
!! | TGATATCATTTACTTTACAT+CGG | - | chr1.3:75328235-75328254 | MS.gene71826:intron | 20.0% |
!! | TGATTAAAAAGCTTAATAGA+TGG | - | chr1.3:75328461-75328480 | MS.gene71826:CDS | 20.0% |
!! | TGCAAATCAATTAAAGAAAA+TGG | - | chr1.3:75327901-75327920 | MS.gene71826:CDS | 20.0% |
!! | TTAACATATGTCTATTCATT+TGG | - | chr1.3:75328682-75328701 | MS.gene71826:intron | 20.0% |
!! | TTAAGCAAATAAACTTCTAT+AGG | - | chr1.3:75330331-75330350 | MS.gene71826:intron | 20.0% |
!!! | AACTAAATTTTTCTGAAATC+TGG | - | chr1.3:75328493-75328512 | MS.gene71826:CDS | 20.0% |
!!! | ACTTTTGTTTGTTTTGTATT+AGG | - | chr1.3:75326964-75326983 | MS.gene71826:intron | 20.0% |
!!! | GCTATTAAGTTATTTCATTT+TGG | - | chr1.3:75330395-75330414 | MS.gene71826:intron | 20.0% |
!!! | TTCTTTTTACTTTTTATCTG+AGG | - | chr1.3:75331079-75331098 | MS.gene71826:intron | 20.0% |
!!! | TTGTATTTTTTTAGACCTAT+AGG | - | chr1.3:75327327-75327346 | MS.gene71826:intron | 20.0% |
!!! | TTTTTGCTGTTATGTTATAT+AGG | - | chr1.3:75327569-75327588 | MS.gene71826:intron | 20.0% |
! | AAACAAGACAGATATTAGAT+AGG | + | chr1.3:75326773-75326792 | None:intergenic | 25.0% |
! | ACAAAAAAACGACTCATTAA+AGG | - | chr1.3:75330703-75330722 | MS.gene71826:intron | 25.0% |
! | ACTTTCTTGTTGAAATTATC+AGG | - | chr1.3:75328711-75328730 | MS.gene71826:intron | 25.0% |
! | AGACAAAGCATAAAACAAAA+AGG | - | chr1.3:75331312-75331331 | MS.gene71826:CDS | 25.0% |
! | ATCTCATTAGTAATGAGTAA+AGG | - | chr1.3:75329186-75329205 | MS.gene71826:CDS | 25.0% |
! | ATTAAATTTGTAGTGATTGG+TGG | + | chr1.3:75327291-75327310 | None:intergenic | 25.0% |
! | ATTTAGTAATGCATGCAAAT+AGG | + | chr1.3:75327686-75327705 | None:intergenic | 25.0% |
! | CGAATAAAACAAATCTATCA+AGG | + | chr1.3:75329229-75329248 | None:intergenic | 25.0% |
! | CTAAAAGATTTATAGCCTAT+AGG | + | chr1.3:75327345-75327364 | None:intergenic | 25.0% |
! | TAAAGTTATAACCACTTCTA+TGG | - | chr1.3:75327867-75327886 | MS.gene71826:CDS | 25.0% |
! | TACCAATAATGAACACAAAA+TGG | + | chr1.3:75327266-75327285 | None:intergenic | 25.0% |
! | TACTCATTACTAATGAGATA+CGG | + | chr1.3:75329185-75329204 | None:intergenic | 25.0% |
! | TATGCAAGAATACCTTTAAA+AGG | + | chr1.3:75329743-75329762 | None:intergenic | 25.0% |
! | TGCACTTAATACAAAAACTA+AGG | - | chr1.3:75329014-75329033 | MS.gene71826:CDS | 25.0% |
! | TTAAATTTGTAGTGATTGGT+GGG | + | chr1.3:75327290-75327309 | None:intergenic | 25.0% |
!! | AAGAATACCTTTAAAAGGTT+AGG | + | chr1.3:75329738-75329757 | None:intergenic | 25.0% |
!! | AAGGAAAAAAGTTTTTATGC+AGG | + | chr1.3:75330313-75330332 | None:intergenic | 25.0% |
!! | ATTTGATGACTACAAAACAA+TGG | - | chr1.3:75328136-75328155 | MS.gene71826:intron | 25.0% |
!! | CTATAGGCTATAAATCTTTT+AGG | - | chr1.3:75327343-75327362 | MS.gene71826:CDS | 25.0% |
!! | GTGAATTTAAAATTCAAACC+TGG | + | chr1.3:75330732-75330751 | None:intergenic | 25.0% |
!! | TTCCATTTTGTGTTCATTAT+TGG | - | chr1.3:75327261-75327280 | MS.gene71826:intron | 25.0% |
!! | TTCTTAATTTTGTTCGAGTA+CGG | + | chr1.3:75328541-75328560 | None:intergenic | 25.0% |
!! | TTTAAAGTAAAGTGACATTG+AGG | + | chr1.3:75330565-75330584 | None:intergenic | 25.0% |
!!! | AATCTTTTAGGTTAAGGTTA+TGG | - | chr1.3:75327355-75327374 | MS.gene71826:CDS | 25.0% |
!!! | AGAATTTTTTTCCCATATCT+AGG | + | chr1.3:75326901-75326920 | None:intergenic | 25.0% |
!!! | AGATTTTCTCTTTACTTTTG+AGG | - | chr1.3:75330173-75330192 | MS.gene71826:intron | 25.0% |
!!! | CATTAGTACTTTAAAGTTTG+TGG | - | chr1.3:75328374-75328393 | MS.gene71826:CDS | 25.0% |
!!! | CTTTTTCGGATGAAAAAAAA+AGG | + | chr1.3:75327044-75327063 | None:intergenic | 25.0% |
!!! | CTTTTTTTTTCATCCGAAAA+AGG | - | chr1.3:75327042-75327061 | MS.gene71826:intron | 25.0% |
!!! | GCTATAAATCTTTTAGGTTA+AGG | - | chr1.3:75327349-75327368 | MS.gene71826:CDS | 25.0% |
!!! | TAAAGGTATTCTTGCATATT+AGG | - | chr1.3:75329745-75329764 | MS.gene71826:intron | 25.0% |
!!! | TTAAATGTCTGAGCTATTTT+CGG | - | chr1.3:75326200-75326219 | MS.gene71826:intron | 25.0% |
!!! | TTCATTTTGGTCTATATATC+TGG | - | chr1.3:75330408-75330427 | MS.gene71826:intron | 25.0% |
!!! | TTGTTTTATTCGTGTTTGAT+TGG | - | chr1.3:75329237-75329256 | MS.gene71826:CDS | 25.0% |
AAAATTTCCAGTGTTCTTGT+TGG | - | chr1.3:75330822-75330841 | MS.gene71826:intron | 30.0% | |
AAAGAGCAAGAAAAATTCCA+CGG | - | chr1.3:75325987-75326006 | MS.gene71826:CDS | 30.0% | |
AAATACACATCTCACATCAA+TGG | + | chr1.3:75326844-75326863 | None:intergenic | 30.0% | |
AATAGAAAATCTTCAGCACA+AGG | - | chr1.3:75326041-75326060 | MS.gene71826:CDS | 30.0% | |
AATCTCTTGTAAGCTATAGA+TGG | - | chr1.3:75327431-75327450 | MS.gene71826:CDS | 30.0% | |
ACTGTACTTAATGAAATGGA+TGG | - | chr1.3:75328054-75328073 | MS.gene71826:intron | 30.0% | |
AGAGATAAACATTGCTTGAA+AGG | + | chr1.3:75326419-75326438 | None:intergenic | 30.0% | |
AGATACTGGTACAAAAGAAT+GGG | + | chr1.3:75329573-75329592 | None:intergenic | 30.0% | |
AGATGAATGATGATCAACAT+CGG | + | chr1.3:75331276-75331295 | None:intergenic | 30.0% | |
CACAACGAAATGTAAATTCA+AGG | - | chr1.3:75327130-75327149 | MS.gene71826:intron | 30.0% | |
CAGTCATTTGATTCAAAATG+TGG | + | chr1.3:75328206-75328225 | None:intergenic | 30.0% | |
GAAATGGCAATTCAAAACAT+AGG | + | chr1.3:75328863-75328882 | None:intergenic | 30.0% | |
GATAGATCAATTGTTAGGAT+TGG | + | chr1.3:75329140-75329159 | None:intergenic | 30.0% | |
GGCTACTCCAAAAATTATTT+GGG | + | chr1.3:75329474-75329493 | None:intergenic | 30.0% | |
GTACCTTGATATATTTCCTT+AGG | + | chr1.3:75328302-75328321 | None:intergenic | 30.0% | |
GTATGTGTGAAATTTGAACT+AGG | - | chr1.3:75326570-75326589 | MS.gene71826:intron | 30.0% | |
GTGTCTTCTCAAAATCTAAT+AGG | + | chr1.3:75327385-75327404 | None:intergenic | 30.0% | |
GTTGACTGTACTTAATGAAA+TGG | - | chr1.3:75328050-75328069 | MS.gene71826:intron | 30.0% | |
TAGATACTGGTACAAAAGAA+TGG | + | chr1.3:75329574-75329593 | None:intergenic | 30.0% | |
TCAAGGTACAAATAGTTCAT+TGG | - | chr1.3:75328313-75328332 | MS.gene71826:CDS | 30.0% | |
TGCATAGATGATTGCTTTAA+AGG | - | chr1.3:75328826-75328845 | MS.gene71826:intron | 30.0% | |
TGGAAGAAAAGAGATCATAA+TGG | - | chr1.3:75328113-75328132 | MS.gene71826:intron | 30.0% | |
TTCAAGCAATGTTTATCTCT+AGG | - | chr1.3:75326419-75326438 | MS.gene71826:CDS | 30.0% | |
! | AAATCCACCTAACCTTTTAA+AGG | - | chr1.3:75329728-75329747 | MS.gene71826:intron | 30.0% |
! | AATACCTTTAAAAGGTTAGG+TGG | + | chr1.3:75329735-75329754 | None:intergenic | 30.0% |
! | ACCAGAAGTATATACTTACA+AGG | + | chr1.3:75328606-75328625 | None:intergenic | 30.0% |
! | CCAGAAGTATATACTTACAA+GGG | + | chr1.3:75328605-75328624 | None:intergenic | 30.0% |
! | CTTTGCTTGTTCTTATTTGA+AGG | - | chr1.3:75326127-75326146 | MS.gene71826:CDS | 30.0% |
! | GTTTTGTATTAGGAAGATGT+GGG | - | chr1.3:75326974-75326993 | MS.gene71826:intron | 30.0% |
! | TGATAATGATGTATGCATGT+TGG | + | chr1.3:75330779-75330798 | None:intergenic | 30.0% |
! | TGTCTTTTATTCCAATTGTG+AGG | - | chr1.3:75329882-75329901 | MS.gene71826:intron | 30.0% |
! | TGTTTTGTATTAGGAAGATG+TGG | - | chr1.3:75326973-75326992 | MS.gene71826:intron | 30.0% |
! | TTCGTCTGAATGTTTTCTTT+AGG | - | chr1.3:75329334-75329353 | MS.gene71826:CDS | 30.0% |
! | TTCTGGTAATGTGAATGAAA+AGG | - | chr1.3:75328619-75328638 | MS.gene71826:intron | 30.0% |
! | TTTTGTAGTGAACAATGATG+AGG | + | chr1.3:75328342-75328361 | None:intergenic | 30.0% |
!! | ACAGTCAACTTGATTTTGAT+AGG | - | chr1.3:75330616-75330635 | MS.gene71826:CDS | 30.0% |
!! | AGTATTGATTGTTTCCTTGT+TGG | - | chr1.3:75330206-75330225 | MS.gene71826:intron | 30.0% |
!! | TAGATTTTGAGAAGACACTT+GGG | - | chr1.3:75327387-75327406 | MS.gene71826:CDS | 30.0% |
!! | TTAGATTTTGAGAAGACACT+TGG | - | chr1.3:75327386-75327405 | MS.gene71826:CDS | 30.0% |
!! | TTGTTTTATGCTTTGTCTTG+CGG | + | chr1.3:75331310-75331329 | None:intergenic | 30.0% |
!!! | TTTTTTTCCCATATCTAGGA+TGG | + | chr1.3:75326897-75326916 | None:intergenic | 30.0% |
AAAGGTTTCGAAGAGAAATG+AGG | - | chr1.3:75329936-75329955 | MS.gene71826:intron | 35.0% | |
AAATGCTAACATGTGCTCTA+AGG | - | chr1.3:75327154-75327173 | MS.gene71826:CDS | 35.0% | |
AAGTGCATCCCTTAAAATCA+TGG | + | chr1.3:75329001-75329020 | None:intergenic | 35.0% | |
AATGCTAACATGTGCTCTAA+GGG | - | chr1.3:75327155-75327174 | MS.gene71826:CDS | 35.0% | |
ACAAAACAATGGAGGACTTA+TGG | - | chr1.3:75328147-75328166 | MS.gene71826:intron | 35.0% | |
ACAAGTAAAGGTTTCAGTGA+AGG | - | chr1.3:75326514-75326533 | MS.gene71826:intron | 35.0% | |
AGAAAATGGGAGCTTAAATG+CGG | - | chr1.3:75327915-75327934 | MS.gene71826:CDS | 35.0% | |
AGACATATTGCATGTCCATA+GGG | - | chr1.3:75326476-75326495 | MS.gene71826:intron | 35.0% | |
AGCTTGGAAGAATTGAAACA+TGG | + | chr1.3:75330282-75330301 | None:intergenic | 35.0% | |
ATATATTTCCTTAGGAGCGA+AGG | + | chr1.3:75328294-75328313 | None:intergenic | 35.0% | |
ATGAATAGACACGAAACAAC+AGG | + | chr1.3:75328775-75328794 | None:intergenic | 35.0% | |
ATTGTTTCCTTGTTGGATGT+TGG | - | chr1.3:75330213-75330232 | MS.gene71826:intron | 35.0% | |
CAAATCTATCAAGGAATGTC+TGG | + | chr1.3:75329220-75329239 | None:intergenic | 35.0% | |
CAACTGTCGAATGAAAATGA+AGG | + | chr1.3:75328977-75328996 | None:intergenic | 35.0% | |
CAGATTGTGAACTATAAGCA+CGG | + | chr1.3:75329424-75329443 | None:intergenic | 35.0% | |
CCAAAAATTATTTGGGTCAG+TGG | + | chr1.3:75329467-75329486 | None:intergenic | 35.0% | |
CCCTTGTAAGTATATACTTC+TGG | - | chr1.3:75328602-75328621 | MS.gene71826:intron | 35.0% | |
GATTGAAGCAAAGCAACATA+AGG | - | chr1.3:75326014-75326033 | MS.gene71826:CDS | 35.0% | |
GCAAATTGACCAAAGTTGAA+AGG | - | chr1.3:75329918-75329937 | MS.gene71826:intron | 35.0% | |
GCTCCTAAGGAAATATATCA+AGG | - | chr1.3:75328296-75328315 | MS.gene71826:CDS | 35.0% | |
GGGCTACTCCAAAAATTATT+TGG | + | chr1.3:75329475-75329494 | None:intergenic | 35.0% | |
GTCAGGATAGATCAATTGTT+AGG | + | chr1.3:75329145-75329164 | None:intergenic | 35.0% | |
GTTTCACAGCATTTACGAAA+TGG | + | chr1.3:75328879-75328898 | None:intergenic | 35.0% | |
TAAAAATCTTCGTCCTGCAA+TGG | + | chr1.3:75326671-75326690 | None:intergenic | 35.0% | |
TAAATTCACCTCCATTCTCA+TGG | - | chr1.3:75330743-75330762 | MS.gene71826:intron | 35.0% | |
TAGACATATTGCATGTCCAT+AGG | - | chr1.3:75326475-75326494 | MS.gene71826:intron | 35.0% | |
TCATTAACTCTCTTGAGCTT+TGG | - | chr1.3:75329387-75329406 | MS.gene71826:CDS | 35.0% | |
TCTAATGCCATCCTAGATAT+GGG | - | chr1.3:75326887-75326906 | MS.gene71826:intron | 35.0% | |
TCTTCGAAACCTTTCAACTT+TGG | + | chr1.3:75329930-75329949 | None:intergenic | 35.0% | |
TGAATATGTCTTCCAATGCT+TGG | - | chr1.3:75328405-75328424 | MS.gene71826:CDS | 35.0% | |
TGATGACTACAAAACAATGG+AGG | - | chr1.3:75328139-75328158 | MS.gene71826:intron | 35.0% | |
TGATTTACGCAGCATATTGA+AGG | - | chr1.3:75329664-75329683 | MS.gene71826:intron | 35.0% | |
TGTAGGAAATCTCAAGAGAT+TGG | - | chr1.3:75327634-75327653 | MS.gene71826:CDS | 35.0% | |
TGTGTGAAATTTGAACTAGG+TGG | - | chr1.3:75326573-75326592 | MS.gene71826:intron | 35.0% | |
TTCTAATGCCATCCTAGATA+TGG | - | chr1.3:75326886-75326905 | MS.gene71826:intron | 35.0% | |
TTCTTCATCACCAAAAACAG+AGG | + | chr1.3:75330856-75330875 | None:intergenic | 35.0% | |
TTTCAATTCTTCCAAGCTCT+CGG | - | chr1.3:75330284-75330303 | MS.gene71826:intron | 35.0% | |
! | AATTTTCCACACTCAGATTG+AGG | - | chr1.3:75330062-75330081 | MS.gene71826:intron | 35.0% |
! | ACAGTTGGCCATGATTTTAA+GGG | - | chr1.3:75328990-75329009 | MS.gene71826:intron | 35.0% |
! | CCACTGACCCAAATAATTTT+TGG | - | chr1.3:75329464-75329483 | MS.gene71826:CDS | 35.0% |
! | CTTCATTTTCATTCGACAGT+TGG | - | chr1.3:75328975-75328994 | MS.gene71826:intron | 35.0% |
! | CTTTTCGCAAGGTTTATGAA+TGG | - | chr1.3:75329360-75329379 | MS.gene71826:CDS | 35.0% |
! | GTGCAGTGATCATAATTTGT+AGG | - | chr1.3:75327617-75327636 | MS.gene71826:intron | 35.0% |
! | TTAACAACCTTTTCCATTGC+AGG | - | chr1.3:75326655-75326674 | MS.gene71826:CDS | 35.0% |
! | TTCTTTTATCCAGGAAGATG+TGG | - | chr1.3:75327759-75327778 | MS.gene71826:CDS | 35.0% |
! | TTGTGTGTTTGCTGGTAAAT+TGG | - | chr1.3:75327511-75327530 | MS.gene71826:CDS | 35.0% |
!! | AAGAACATTTGTGACTTGCT+AGG | - | chr1.3:75328652-75328671 | MS.gene71826:intron | 35.0% |
!! | AGATTTTGAGAAGACACTTG+GGG | - | chr1.3:75327388-75327407 | MS.gene71826:CDS | 35.0% |
!! | ATACTTTGATAGTGCACTAG+AGG | + | chr1.3:75330657-75330676 | None:intergenic | 35.0% |
!! | TATTGAAGGTACTCGTTACT+TGG | - | chr1.3:75329678-75329697 | MS.gene71826:intron | 35.0% |
!!! | CGTTTTTTTGTTTTGCTCTC+TGG | + | chr1.3:75330694-75330713 | None:intergenic | 35.0% |
!!! | TGCTTTTTCCTCTTTCCTTT+TGG | + | chr1.3:75331143-75331162 | None:intergenic | 35.0% |
!!! | TTTGTCTTGCGGTTTTGTTT+TGG | + | chr1.3:75331299-75331318 | None:intergenic | 35.0% |
!!! | TTTTTTGTTTTGCTCTCTGG+CGG | + | chr1.3:75330691-75330710 | None:intergenic | 35.0% |
AACTGCGTCATTGAACTTCT+CGG | - | chr1.3:75328922-75328941 | MS.gene71826:intron | 40.0% | |
AAGTGTCAAGCTCATAAGTC+AGG | + | chr1.3:75329162-75329181 | None:intergenic | 40.0% | |
AATTACTGCACAAGACCGAA+TGG | + | chr1.3:75328442-75328461 | None:intergenic | 40.0% | |
AATTGGTTGAAGAGGAATGC+CGG | - | chr1.3:75327528-75327547 | MS.gene71826:CDS | 40.0% | |
ACAAGCAAAGTTGCATACAC+AGG | + | chr1.3:75326117-75326136 | None:intergenic | 40.0% | |
ACAGTAATCCATGAGAATGG+AGG | + | chr1.3:75330754-75330773 | None:intergenic | 40.0% | |
ACATTGAGGCGTGAAATAAG+TGG | + | chr1.3:75330551-75330570 | None:intergenic | 40.0% | |
ACGACTCATTAAAGGAATCC+AGG | - | chr1.3:75330711-75330730 | MS.gene71826:intron | 40.0% | |
ACGTAGACGAAGACAAGTAA+AGG | - | chr1.3:75326502-75326521 | MS.gene71826:intron | 40.0% | |
AGAGAGTTGTGCATCTGTAT+TGG | - | chr1.3:75328796-75328815 | MS.gene71826:intron | 40.0% | |
AGGAGCAATCTTGACAATAC+CGG | + | chr1.3:75327550-75327569 | None:intergenic | 40.0% | |
AGTAAGCTGCTTATCCAAAC+AGG | - | chr1.3:75326366-75326385 | MS.gene71826:CDS | 40.0% | |
ATAGACACGAAACAACAGGA+AGG | + | chr1.3:75328771-75328790 | None:intergenic | 40.0% | |
ATCAGGTGTCTCTTCATTTC+TGG | - | chr1.3:75328728-75328747 | MS.gene71826:intron | 40.0% | |
CAAGGTAGGACTTCACAATA+TGG | + | chr1.3:75328173-75328192 | None:intergenic | 40.0% | |
CATATTGTGAAGTCCTACCT+TGG | - | chr1.3:75328171-75328190 | MS.gene71826:intron | 40.0% | |
CATTGAGGCGTGAAATAAGT+GGG | + | chr1.3:75330550-75330569 | None:intergenic | 40.0% | |
CATTGCAGTGGCTAAATGAT+GGG | - | chr1.3:75327066-75327085 | MS.gene71826:intron | 40.0% | |
CCACAAATCAACCATAGAAG+TGG | + | chr1.3:75327881-75327900 | None:intergenic | 40.0% | |
CTACTGAACCAAAAGGAAAG+AGG | - | chr1.3:75331132-75331151 | MS.gene71826:intron | 40.0% | |
CTCCACAACATCATCATCAA+TGG | + | chr1.3:75331183-75331202 | None:intergenic | 40.0% | |
CTTAGCTACTAAGCTTGCAT+TGG | - | chr1.3:75326919-75326938 | MS.gene71826:intron | 40.0% | |
CTTTCTACCTAATGATCCTG+CGG | - | chr1.3:75330125-75330144 | MS.gene71826:intron | 40.0% | |
GAAGAATTGAAACATGGAGC+AGG | + | chr1.3:75330276-75330295 | None:intergenic | 40.0% | |
GACACAGTAATCCATGAGAA+TGG | + | chr1.3:75330757-75330776 | None:intergenic | 40.0% | |
GCCACAAACATGTCTCTAAA+GGG | + | chr1.3:75327106-75327125 | None:intergenic | 40.0% | |
GCTAAACACTATCGTATGGT+GGG | - | chr1.3:75330430-75330449 | MS.gene71826:intron | 40.0% | |
GGAGGATACTAAAGAGAATG+AGG | - | chr1.3:75330890-75330909 | MS.gene71826:intron | 40.0% | |
GTAAGCTGCTTATCCAAACA+GGG | - | chr1.3:75326367-75326386 | MS.gene71826:CDS | 40.0% | |
GTACTTGAAAGAGAATGACC+CGG | - | chr1.3:75326694-75326713 | MS.gene71826:intron | 40.0% | |
GTGAAATTTGAACTAGGTGG+TGG | - | chr1.3:75326576-75326595 | MS.gene71826:intron | 40.0% | |
TAGACACGAAACAACAGGAA+GGG | + | chr1.3:75328770-75328789 | None:intergenic | 40.0% | |
TCACTGAACTTAAGCAGATC+CGG | + | chr1.3:75326716-75326735 | None:intergenic | 40.0% | |
TCAGGTGTCTCTTCATTTCT+GGG | - | chr1.3:75328729-75328748 | MS.gene71826:intron | 40.0% | |
TCATCTCCAGCATATCCAAA+AGG | + | chr1.3:75329601-75329620 | None:intergenic | 40.0% | |
TCATTGCAGTGGCTAAATGA+TGG | - | chr1.3:75327065-75327084 | MS.gene71826:intron | 40.0% | |
TCTAGCAGCAAAATGTTACG+AGG | + | chr1.3:75329094-75329113 | None:intergenic | 40.0% | |
TCTCATCATCATCACCATAG+TGG | + | chr1.3:75327975-75327994 | None:intergenic | 40.0% | |
TCTGGCTAAACACTATCGTA+TGG | - | chr1.3:75330426-75330445 | MS.gene71826:intron | 40.0% | |
TGAAGAATCAGCAAGTGATG+AGG | - | chr1.3:75330869-75330888 | MS.gene71826:intron | 40.0% | |
TGCCACAAACATGTCTCTAA+AGG | + | chr1.3:75327107-75327126 | None:intergenic | 40.0% | |
TGCTGGTAAATTGGTTGAAG+AGG | - | chr1.3:75327520-75327539 | MS.gene71826:CDS | 40.0% | |
TTAGCTATTAAGGCCCTGTT+TGG | + | chr1.3:75326383-75326402 | None:intergenic | 40.0% | |
TTCTGTGGTTGAAGAACTTG+CGG | - | chr1.3:75329817-75329836 | MS.gene71826:intron | 40.0% | |
TTCTTCTCCAACAAGAACAC+TGG | + | chr1.3:75330832-75330851 | None:intergenic | 40.0% | |
TTGTGCATCTGTATTGGATC+TGG | - | chr1.3:75328802-75328821 | MS.gene71826:intron | 40.0% | |
! | ACCAGTATCTATGCTCCTTT+TGG | - | chr1.3:75329583-75329602 | MS.gene71826:intron | 40.0% |
! | ATCAACATCGGCATTTTTCC+CGG | + | chr1.3:75331264-75331283 | None:intergenic | 40.0% |
! | CGTAACATTTTGCTGCTAGA+GGG | - | chr1.3:75329094-75329113 | MS.gene71826:CDS | 40.0% |
! | CTGTTTCGCTTCTTTTATCC+AGG | - | chr1.3:75327750-75327769 | MS.gene71826:CDS | 40.0% |
! | GACAGTTGGCCATGATTTTA+AGG | - | chr1.3:75328989-75329008 | MS.gene71826:intron | 40.0% |
! | GAGCAATACTTGTCATTTCC+AGG | + | chr1.3:75330966-75330985 | None:intergenic | 40.0% |
! | GGAGAAGAATCCTCTGTTTT+TGG | - | chr1.3:75330843-75330862 | MS.gene71826:intron | 40.0% |
! | TATGCTCCTTTTGGATATGC+TGG | - | chr1.3:75329592-75329611 | MS.gene71826:intron | 40.0% |
! | TCCAAAAGGAGCATAGATAC+TGG | + | chr1.3:75329587-75329606 | None:intergenic | 40.0% |
! | TCCCTTTAGAGACATGTTTG+TGG | - | chr1.3:75327102-75327121 | MS.gene71826:intron | 40.0% |
! | TCGTAACATTTTGCTGCTAG+AGG | - | chr1.3:75329093-75329112 | MS.gene71826:CDS | 40.0% |
! | TGCGCTTTTCATTCACAAAC+TGG | + | chr1.3:75330095-75330114 | None:intergenic | 40.0% |
! | TTGGCATGCATCAGATTTTG+TGG | - | chr1.3:75330021-75330040 | MS.gene71826:intron | 40.0% |
!! | AAATGTGGAGAGCATTTCCA+AGG | + | chr1.3:75328191-75328210 | None:intergenic | 40.0% |
!! | CAATTGTTAGGATTGGTTCC+AGG | + | chr1.3:75329133-75329152 | None:intergenic | 40.0% |
!! | CATTGATGATGATGTTGTGG+AGG | - | chr1.3:75331181-75331200 | MS.gene71826:intron | 40.0% |
!! | CCACTTCTATGGTTGATTTG+TGG | - | chr1.3:75327878-75327897 | MS.gene71826:CDS | 40.0% |
!! | TCTTTAGGAAGCTTTTCGCA+AGG | - | chr1.3:75329349-75329368 | MS.gene71826:CDS | 40.0% |
!! | TGCCATTGATGATGATGTTG+TGG | - | chr1.3:75331178-75331197 | MS.gene71826:intron | 40.0% |
!!! | AGAGGCTTGTGTTTTTTCTG+TGG | - | chr1.3:75329802-75329821 | MS.gene71826:intron | 40.0% |
!!! | CTCTTTCCTTTTGGTTCAGT+AGG | + | chr1.3:75331134-75331153 | None:intergenic | 40.0% |
AAGTTGCGCAACCTCACAAT+TGG | + | chr1.3:75329896-75329915 | None:intergenic | 45.0% | |
AATGCCCGTGTCTTAAGAGT+TGG | + | chr1.3:75329779-75329798 | None:intergenic | 45.0% | |
AATGGGTAGAAGCAGCAATC+TGG | + | chr1.3:75329556-75329575 | None:intergenic | 45.0% | |
AGAACCACAGGTAGATGAGA+AGG | - | chr1.3:75327801-75327820 | MS.gene71826:CDS | 45.0% | |
AGAATCAGCAAGTGATGAGG+AGG | - | chr1.3:75330872-75330891 | MS.gene71826:intron | 45.0% | |
AGCATCGTCAGTCACTTCAT+TGG | + | chr1.3:75330378-75330397 | None:intergenic | 45.0% | |
AGGTCAACCAACATCCAACA+AGG | + | chr1.3:75330223-75330242 | None:intergenic | 45.0% | |
AGTTCCATCCACGTTCTCTT+TGG | + | chr1.3:75330919-75330938 | None:intergenic | 45.0% | |
ATAGCCTTCTCATCTACCTG+TGG | + | chr1.3:75327808-75327827 | None:intergenic | 45.0% | |
CAACAGCCTACTGAACCAAA+AGG | - | chr1.3:75331125-75331144 | MS.gene71826:intron | 45.0% | |
CAAGCCAACTCTTAAGACAC+GGG | - | chr1.3:75329772-75329791 | MS.gene71826:intron | 45.0% | |
CACTGAACTTAAGCAGATCC+GGG | + | chr1.3:75326715-75326734 | None:intergenic | 45.0% | |
CACTGTGGAGTTACTCTGTT+GGG | - | chr1.3:75329849-75329868 | MS.gene71826:intron | 45.0% | |
CAGGTGTCTCTTCATTTCTG+GGG | - | chr1.3:75328730-75328749 | MS.gene71826:intron | 45.0% | |
CCGGATACATCTCAACCTAA+GGG | + | chr1.3:75329525-75329544 | None:intergenic | 45.0% | |
CGCAGGATCATTAGGTAGAA+AGG | + | chr1.3:75330127-75330146 | None:intergenic | 45.0% | |
CGGATACATCTCAACCTAAG+GGG | + | chr1.3:75329524-75329543 | None:intergenic | 45.0% | |
CTGAGGAATGCTTTGCTTTC+AGG | - | chr1.3:75331096-75331115 | MS.gene71826:intron | 45.0% | |
CTTTGCTTCAATCACAACCG+TGG | + | chr1.3:75326007-75326026 | None:intergenic | 45.0% | |
GAGGGATACAATCAATCACC+TGG | - | chr1.3:75329112-75329131 | MS.gene71826:CDS | 45.0% | |
GAGTTACTCTGTTGGGTTCA+TGG | - | chr1.3:75329856-75329875 | MS.gene71826:intron | 45.0% | |
GCAAGCCAACTCTTAAGACA+CGG | - | chr1.3:75329771-75329790 | MS.gene71826:intron | 45.0% | |
GGAAGATGTGGATGATGACA+TGG | - | chr1.3:75327771-75327790 | MS.gene71826:CDS | 45.0% | |
GGCTAAACACTATCGTATGG+TGG | - | chr1.3:75330429-75330448 | MS.gene71826:intron | 45.0% | |
GTGGATGATGACATGGAAGA+TGG | - | chr1.3:75327778-75327797 | MS.gene71826:CDS | 45.0% | |
GTGTGTTTGTGTATGCAGCT+GGG | + | chr1.3:75331018-75331037 | None:intergenic | 45.0% | |
TAAGACACGGGCATTTCAAG+AGG | - | chr1.3:75329784-75329803 | MS.gene71826:intron | 45.0% | |
TCAAGAAAAGATGATGCCGC+AGG | + | chr1.3:75330144-75330163 | None:intergenic | 45.0% | |
TCCGAAAAAGGTCATTGCAG+TGG | - | chr1.3:75327054-75327073 | MS.gene71826:intron | 45.0% | |
TCCGGATACATCTCAACCTA+AGG | + | chr1.3:75329526-75329545 | None:intergenic | 45.0% | |
TCTTCGTCCTGCAATGGAAA+AGG | + | chr1.3:75326665-75326684 | None:intergenic | 45.0% | |
TGAGAAGGCTATTGAGCATG+AGG | - | chr1.3:75327816-75327835 | MS.gene71826:CDS | 45.0% | |
TGAGCATGAGGTTCAAGCAA+AGG | - | chr1.3:75327828-75327847 | MS.gene71826:CDS | 45.0% | |
TGTCATCATCCACATCTTCC+TGG | + | chr1.3:75327771-75327790 | None:intergenic | 45.0% | |
TGTCCTAAAAGCCCTCATCA+GGG | + | chr1.3:75327947-75327966 | None:intergenic | 45.0% | |
TTGTTGAAGCTTCCTGCTTC+TGG | - | chr1.3:75328090-75328109 | MS.gene71826:intron | 45.0% | |
! | AAGGCGTGTTGATATGCAGT+CGG | + | chr1.3:75328958-75328977 | None:intergenic | 45.0% |
! | CAGCAATCTGGTTCAACATC+CGG | + | chr1.3:75329544-75329563 | None:intergenic | 45.0% |
! | CATTAGCCTCAATCTGAGTG+TGG | + | chr1.3:75330071-75330090 | None:intergenic | 45.0% |
! | CTTCCAATGCTTGGTGATTG+TGG | - | chr1.3:75328414-75328433 | MS.gene71826:CDS | 45.0% |
! | CTTGTCATTTCCAGGTAACC+AGG | + | chr1.3:75330958-75330977 | None:intergenic | 45.0% |
! | GAACTAGGTGGTGGTTGATA+GGG | - | chr1.3:75326585-75326604 | MS.gene71826:CDS | 45.0% |
! | GCCACTGCAATGACCTTTTT+CGG | + | chr1.3:75327058-75327077 | None:intergenic | 45.0% |
! | TCTTTTCTTCCACCAGAAGC+AGG | + | chr1.3:75328105-75328124 | None:intergenic | 45.0% |
! | TGAACTAGGTGGTGGTTGAT+AGG | - | chr1.3:75326584-75326603 | MS.gene71826:CDS | 45.0% |
! | TGATGATGTTGTGGAGGACT+TGG | - | chr1.3:75331187-75331206 | MS.gene71826:intron | 45.0% |
! | TGCGGCATCATCTTTTCTTG+AGG | - | chr1.3:75330143-75330162 | MS.gene71826:intron | 45.0% |
! | TTGGTGATTGTGGCACCATT+CGG | - | chr1.3:75328424-75328443 | MS.gene71826:CDS | 45.0% |
! | TTTAGCTCATCCTGGTTACC+TGG | - | chr1.3:75330945-75330964 | MS.gene71826:intron | 45.0% |
! | TTTAGGACAGCATGCCACTA+TGG | - | chr1.3:75327958-75327977 | MS.gene71826:intron | 45.0% |
!! | CCCTTAGGTTGAGATGTATC+CGG | - | chr1.3:75329522-75329541 | MS.gene71826:CDS | 45.0% |
!! | TCTCTTCATTTCTGGGGTAC+TGG | - | chr1.3:75328736-75328755 | MS.gene71826:intron | 45.0% |
AATGAGGCAGCTTATTCGCG+AGG | - | chr1.3:75329952-75329971 | MS.gene71826:intron | 50.0% | |
CAGAGTAACTCCACAGTGCT+AGG | + | chr1.3:75329847-75329866 | None:intergenic | 50.0% | |
CATGGAAGATGGAGAACCAC+AGG | - | chr1.3:75327789-75327808 | MS.gene71826:CDS | 50.0% | |
CGTCATTGAACTTCTCGGAG+TGG | - | chr1.3:75328927-75328946 | MS.gene71826:intron | 50.0% | |
CGTGTGTTTGTGTATGCAGC+TGG | + | chr1.3:75331019-75331038 | None:intergenic | 50.0% | |
CTGTCCTAAAAGCCCTCATC+AGG | + | chr1.3:75327948-75327967 | None:intergenic | 50.0% | |
CTTCGTCTACGTCTACCCTA+TGG | + | chr1.3:75326494-75326513 | None:intergenic | 50.0% | |
CTTTGCCAATGCCTCCTGTA+GGG | + | chr1.3:75329640-75329659 | None:intergenic | 50.0% | |
GACTGTGCTTGTGTGTTTGC+TGG | - | chr1.3:75327503-75327522 | MS.gene71826:CDS | 50.0% | |
GAGTTGAATAGACCCCCTAC+AGG | - | chr1.3:75329623-75329642 | MS.gene71826:intron | 50.0% | |
GATGATGCCGCAGGATCATT+AGG | + | chr1.3:75330135-75330154 | None:intergenic | 50.0% | |
GATGCCAAAGAGAACGTGGA+TGG | - | chr1.3:75330912-75330931 | MS.gene71826:intron | 50.0% | |
GCACTGTGGAGTTACTCTGT+TGG | - | chr1.3:75329848-75329867 | MS.gene71826:intron | 50.0% | |
GTGCCACAATCACCAAGCAT+TGG | + | chr1.3:75328420-75328439 | None:intergenic | 50.0% | |
TGAGGATGCCAAAGAGAACG+TGG | - | chr1.3:75330908-75330927 | MS.gene71826:intron | 50.0% | |
TTGAAGCTTCCTGCTTCTGG+TGG | - | chr1.3:75328093-75328112 | MS.gene71826:intron | 50.0% | |
TTGAATAGACCCCCTACAGG+AGG | - | chr1.3:75329626-75329645 | MS.gene71826:intron | 50.0% | |
TTTGCCAATGCCTCCTGTAG+GGG | + | chr1.3:75329639-75329658 | None:intergenic | 50.0% | |
! | CTGCTGCATTTAGCTCATCC+TGG | - | chr1.3:75330937-75330956 | MS.gene71826:intron | 50.0% |
! | GTTCCCTGATGAGGGCTTTT+AGG | - | chr1.3:75327941-75327960 | MS.gene71826:intron | 50.0% |
!! | CTAAATGATGGGTGACTGGC+TGG | - | chr1.3:75327077-75327096 | MS.gene71826:intron | 50.0% |
!! | CTGCTTTTCCTTCGCTCCTA+AGG | - | chr1.3:75328283-75328302 | MS.gene71826:CDS | 50.0% |
!! | CTTCATTTCTGGGGTACTGG+TGG | - | chr1.3:75328739-75328758 | MS.gene71826:intron | 50.0% |
!! | GTGGAGAGCATTTCCAAGGT+AGG | + | chr1.3:75328187-75328206 | None:intergenic | 50.0% |
!! | GTGGCTAAATGATGGGTGAC+TGG | - | chr1.3:75327073-75327092 | MS.gene71826:intron | 50.0% |
ACCTAGCCGTGGGAACTAGA+CGG | + | chr1.3:75329496-75329515 | None:intergenic | 55.0% | |
ATGCGGTTCGTTCCCTGATG+AGG | - | chr1.3:75327932-75327951 | MS.gene71826:CDS | 55.0% | |
CGGCTAGGTACTTTCCCCTT+AGG | - | chr1.3:75329507-75329526 | MS.gene71826:CDS | 55.0% | |
GCTTTGCCAATGCCTCCTGT+AGG | + | chr1.3:75329641-75329660 | None:intergenic | 55.0% | |
TATGCAGGTAGCCGAGAGCT+TGG | + | chr1.3:75330298-75330317 | None:intergenic | 55.0% | |
TGCGGTTCGTTCCCTGATGA+GGG | - | chr1.3:75327933-75327952 | MS.gene71826:CDS | 55.0% | |
TTGCCAATGCCTCCTGTAGG+GGG | + | chr1.3:75329638-75329657 | None:intergenic | 55.0% | |
TTGCGGAACACCTAGCACTG+TGG | - | chr1.3:75329834-75329853 | MS.gene71826:intron | 55.0% | |
! | AGTAGCCCGTCTAGTTCCCA+CGG | - | chr1.3:75329487-75329506 | MS.gene71826:CDS | 55.0% |
! | CGGCATTTTTCCCGGCAGAA+GGG | + | chr1.3:75331256-75331275 | None:intergenic | 55.0% |
! | TCGGCATTTTTCCCGGCAGA+AGG | + | chr1.3:75331257-75331276 | None:intergenic | 55.0% |
!! | AAGGGGAAAGTACCTAGCCG+TGG | + | chr1.3:75329507-75329526 | None:intergenic | 55.0% |
!! | AGGGGAAAGTACCTAGCCGT+GGG | + | chr1.3:75329506-75329525 | None:intergenic | 55.0% |
!! | CATTTCTGGGGTACTGGTGG+AGG | - | chr1.3:75328742-75328761 | MS.gene71826:intron | 55.0% |
CCTAGCCGTGGGAACTAGAC+GGG | + | chr1.3:75329495-75329514 | None:intergenic | 60.0% | |
TCAAGCGACAGCCCTTCTGC+CGG | - | chr1.3:75331242-75331261 | MS.gene71826:intron | 60.0% | |
! | AGACCCCCTACAGGAGGCAT+TGG | - | chr1.3:75329632-75329651 | MS.gene71826:intron | 60.0% |
! | GCAGAAGGGCTGTCGCTTGA+AGG | + | chr1.3:75331242-75331261 | None:intergenic | 60.0% |
CAAGCGACAGCCCTTCTGCC+GGG | - | chr1.3:75331243-75331262 | MS.gene71826:intron | 65.0% | |
! | CCCGTCTAGTTCCCACGGCT+AGG | - | chr1.3:75329492-75329511 | MS.gene71826:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 75325953 | 75331361 | 75325953 | ID=MS.gene71826 |
chr1.3 | mRNA | 75325953 | 75331361 | 75325953 | ID=MS.gene71826.t1;Parent=MS.gene71826 |
chr1.3 | exon | 75331252 | 75331361 | 75331252 | ID=MS.gene71826.t1.exon1;Parent=MS.gene71826.t1 |
chr1.3 | CDS | 75331252 | 75331361 | 75331252 | ID=cds.MS.gene71826.t1;Parent=MS.gene71826.t1 |
chr1.3 | exon | 75330566 | 75330637 | 75330566 | ID=MS.gene71826.t1.exon2;Parent=MS.gene71826.t1 |
chr1.3 | CDS | 75330566 | 75330637 | 75330566 | ID=cds.MS.gene71826.t1;Parent=MS.gene71826.t1 |
chr1.3 | exon | 75328997 | 75329542 | 75328997 | ID=MS.gene71826.t1.exon3;Parent=MS.gene71826.t1 |
chr1.3 | CDS | 75328997 | 75329542 | 75328997 | ID=cds.MS.gene71826.t1;Parent=MS.gene71826.t1 |
chr1.3 | exon | 75328279 | 75328581 | 75328279 | ID=MS.gene71826.t1.exon4;Parent=MS.gene71826.t1 |
chr1.3 | CDS | 75328279 | 75328581 | 75328279 | ID=cds.MS.gene71826.t1;Parent=MS.gene71826.t1 |
chr1.3 | exon | 75327629 | 75327958 | 75327629 | ID=MS.gene71826.t1.exon5;Parent=MS.gene71826.t1 |
chr1.3 | CDS | 75327629 | 75327958 | 75327629 | ID=cds.MS.gene71826.t1;Parent=MS.gene71826.t1 |
chr1.3 | exon | 75327341 | 75327547 | 75327341 | ID=MS.gene71826.t1.exon6;Parent=MS.gene71826.t1 |
chr1.3 | CDS | 75327341 | 75327547 | 75327341 | ID=cds.MS.gene71826.t1;Parent=MS.gene71826.t1 |
chr1.3 | exon | 75327150 | 75327236 | 75327150 | ID=MS.gene71826.t1.exon7;Parent=MS.gene71826.t1 |
chr1.3 | CDS | 75327150 | 75327236 | 75327150 | ID=cds.MS.gene71826.t1;Parent=MS.gene71826.t1 |
chr1.3 | exon | 75326582 | 75326676 | 75326582 | ID=MS.gene71826.t1.exon8;Parent=MS.gene71826.t1 |
chr1.3 | CDS | 75326582 | 75326676 | 75326582 | ID=cds.MS.gene71826.t1;Parent=MS.gene71826.t1 |
chr1.3 | exon | 75326338 | 75326481 | 75326338 | ID=MS.gene71826.t1.exon9;Parent=MS.gene71826.t1 |
chr1.3 | CDS | 75326338 | 75326481 | 75326338 | ID=cds.MS.gene71826.t1;Parent=MS.gene71826.t1 |
chr1.3 | exon | 75325953 | 75326196 | 75325953 | ID=MS.gene71826.t1.exon10;Parent=MS.gene71826.t1 |
chr1.3 | CDS | 75325953 | 75326196 | 75325953 | ID=cds.MS.gene71826.t1;Parent=MS.gene71826.t1 |
Gene Sequence |
Protein sequence |