Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75477.t1 | ACJ86149.1 | 95.7 | 208 | 9 | 0 | 1 | 208 | 1 | 208 | 2.50E-87 | 331.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75477.t1 | P10140 | 49.0 | 51 | 26 | 0 | 39 | 89 | 33 | 83 | 1.4e-06 | 54.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75477.t1 | B7FN16 | 95.7 | 208 | 9 | 0 | 1 | 208 | 1 | 208 | 1.8e-87 | 331.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene75477 | 0.805813 | 1.11E-49 | -1.69E-46 |
| MS.gene049382 | MS.gene75477 | 0.80619 | 9.28E-50 | -1.69E-46 |
| MS.gene049756 | MS.gene75477 | 0.81364 | 2.31E-51 | -1.69E-46 |
| MS.gene04984 | MS.gene75477 | 0.804055 | 2.60E-49 | -1.69E-46 |
| MS.gene049887 | MS.gene75477 | 0.83717 | 6.09E-57 | -1.69E-46 |
| MS.gene050114 | MS.gene75477 | 0.800352 | 1.50E-48 | -1.69E-46 |
| MS.gene050277 | MS.gene75477 | 0.877728 | 4.98E-69 | -1.69E-46 |
| MS.gene050320 | MS.gene75477 | 0.817509 | 3.18E-52 | -1.69E-46 |
| MS.gene050838 | MS.gene75477 | 0.835209 | 1.92E-56 | -1.69E-46 |
| MS.gene051063 | MS.gene75477 | 0.872085 | 4.17E-67 | -1.69E-46 |
| MS.gene051088 | MS.gene75477 | 0.821244 | 4.48E-53 | -1.69E-46 |
| MS.gene051245 | MS.gene75477 | 0.854974 | 8.61E-62 | -1.69E-46 |
| MS.gene051330 | MS.gene75477 | 0.810064 | 1.39E-50 | -1.69E-46 |
| MS.gene051451 | MS.gene75477 | 0.802637 | 5.11E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene75477 | 0.808886 | 2.48E-50 | -1.69E-46 |
| MS.gene051746 | MS.gene75477 | 0.843252 | 1.57E-58 | -1.69E-46 |
| MS.gene051748 | MS.gene75477 | 0.845507 | 3.89E-59 | -1.69E-46 |
| MS.gene051756 | MS.gene75477 | 0.839155 | 1.88E-57 | -1.69E-46 |
| MS.gene051757 | MS.gene75477 | 0.849493 | 3.12E-60 | -1.69E-46 |
| MS.gene051850 | MS.gene75477 | 0.811474 | 6.87E-51 | -1.69E-46 |
| MS.gene051903 | MS.gene75477 | 0.858273 | 9.22E-63 | -1.69E-46 |
| MS.gene052133 | MS.gene75477 | 0.817134 | 3.86E-52 | -1.69E-46 |
| MS.gene052202 | MS.gene75477 | 0.858657 | 7.09E-63 | -1.69E-46 |
| MS.gene052256 | MS.gene75477 | 0.81442 | 1.55E-51 | -1.69E-46 |
| MS.gene052286 | MS.gene75477 | 0.811351 | 7.31E-51 | -1.69E-46 |
| MS.gene052302 | MS.gene75477 | 0.839676 | 1.37E-57 | -1.69E-46 |
| MS.gene052376 | MS.gene75477 | 0.829616 | 4.66E-55 | -1.69E-46 |
| MS.gene052665 | MS.gene75477 | 0.810159 | 1.32E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene75477 | 0.809975 | 1.45E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene75477 | 0.823747 | 1.17E-53 | -1.69E-46 |
| MS.gene053109 | MS.gene75477 | 0.83443 | 3.01E-56 | -1.69E-46 |
| MS.gene053437 | MS.gene75477 | 0.800282 | 1.55E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene75477 | 0.834266 | 3.31E-56 | -1.69E-46 |
| MS.gene055424 | MS.gene75477 | 0.806296 | 8.81E-50 | -1.69E-46 |
| MS.gene055441 | MS.gene75477 | 0.811024 | 8.61E-51 | -1.69E-46 |
| MS.gene055591 | MS.gene75477 | -0.802828 | 4.66E-49 | -1.69E-46 |
| MS.gene056043 | MS.gene75477 | -0.801653 | 8.13E-49 | -1.69E-46 |
| MS.gene056432 | MS.gene75477 | 0.873901 | 1.03E-67 | -1.69E-46 |
| MS.gene056580 | MS.gene75477 | 0.81066 | 1.03E-50 | -1.69E-46 |
| MS.gene056631 | MS.gene75477 | 0.869538 | 2.87E-66 | -1.69E-46 |
| MS.gene056760 | MS.gene75477 | 0.843105 | 1.72E-58 | -1.69E-46 |
| MS.gene057057 | MS.gene75477 | 0.850031 | 2.21E-60 | -1.69E-46 |
| MS.gene057094 | MS.gene75477 | 0.860787 | 1.62E-63 | -1.69E-46 |
| MS.gene057140 | MS.gene75477 | 0.848256 | 6.88E-60 | -1.69E-46 |
| MS.gene057234 | MS.gene75477 | 0.859232 | 4.77E-63 | -1.69E-46 |
| MS.gene057705 | MS.gene75477 | 0.807037 | 6.15E-50 | -1.69E-46 |
| MS.gene058055 | MS.gene75477 | 0.837669 | 4.54E-57 | -1.69E-46 |
| MS.gene058084 | MS.gene75477 | 0.811724 | 6.07E-51 | -1.69E-46 |
| MS.gene05809 | MS.gene75477 | 0.822014 | 2.97E-53 | -1.69E-46 |
| MS.gene058182 | MS.gene75477 | 0.84289 | 1.96E-58 | -1.69E-46 |
| MS.gene058238 | MS.gene75477 | 0.845253 | 4.56E-59 | -1.69E-46 |
| MS.gene058654 | MS.gene75477 | 0.801221 | 9.97E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene75477 | 0.813769 | 2.16E-51 | -1.69E-46 |
| MS.gene058906 | MS.gene75477 | 0.920044 | 2.11E-87 | -1.69E-46 |
| MS.gene059171 | MS.gene75477 | 0.815058 | 1.12E-51 | -1.69E-46 |
| MS.gene059898 | MS.gene75477 | 0.82972 | 4.40E-55 | -1.69E-46 |
| MS.gene06001 | MS.gene75477 | 0.904436 | 1.23E-79 | -1.69E-46 |
| MS.gene060165 | MS.gene75477 | 0.80032 | 1.52E-48 | -1.69E-46 |
| MS.gene060619 | MS.gene75477 | 0.823388 | 1.42E-53 | -1.69E-46 |
| MS.gene061145 | MS.gene75477 | 0.829414 | 5.22E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75477.t1 | MTR_3g087190 | 97.115 | 208 | 6 | 0 | 1 | 208 | 1 | 208 | 1.44e-148 | 411 |
| MS.gene75477.t1 | MTR_3g079680 | 66.026 | 156 | 21 | 3 | 16 | 170 | 27 | 151 | 8.47e-59 | 182 |
| MS.gene75477.t1 | MTR_8g090225 | 56.790 | 81 | 33 | 2 | 20 | 99 | 13 | 92 | 8.05e-23 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75477.t1 | AT4G39880 | 72.727 | 132 | 34 | 1 | 1 | 132 | 1 | 130 | 1.81e-61 | 189 |
Find 67 sgRNAs with CRISPR-Local
Find 71 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGGGTTTAAGCCGCAAAA+TGG | 0.269582 | 3.3:-72716331 | MS.gene75477:CDS |
| TCGAATCTGTTTGCGAGTTC+TGG | 0.270288 | 3.3:-72716277 | MS.gene75477:CDS |
| TGCGAGTTCTGGTTCGAATC+AGG | 0.295567 | 3.3:-72716266 | MS.gene75477:CDS |
| TGCAAAACCTGATTACAAAA+AGG | 0.295568 | 3.3:-72716515 | MS.gene75477:CDS |
| AGCCGCAAAATGGGTATTAC+AGG | 0.309367 | 3.3:-72716321 | MS.gene75477:CDS |
| AACACGCTTGATTTCAATCT+TGG | 0.311058 | 3.3:+72716624 | None:intergenic |
| CAGGGACGGTTTGACCGTTC+TGG | 0.311213 | 3.3:-72716247 | MS.gene75477:CDS |
| GATTGAAATCAAGCGTGTTC+TGG | 0.327858 | 3.3:-72716620 | MS.gene75477:CDS |
| TTGAACGCCCTGGTTTGAAC+AGG | 0.371974 | 3.3:-72716207 | MS.gene75477:CDS |
| TAAGAAGAGTTTGAATAAAC+AGG | 0.389935 | 3.3:-72716422 | MS.gene75477:CDS |
| AGGGGAGGGTTTGATCGTTC+TGG | 0.399564 | 3.3:-72716301 | MS.gene75477:CDS |
| TTGACCGTTCTGGTTCGAAC+CGG | 0.419451 | 3.3:-72716237 | MS.gene75477:CDS |
| AAGCGCCGGGGAAGAGTCAT+TGG | 0.426778 | 3.3:-72716375 | MS.gene75477:CDS |
| ATTTCAATCTTGGAAGCTGA+TGG | 0.434077 | 3.3:+72716634 | None:intergenic |
| GCGAGTTCTGGTTCGAATCA+GGG | 0.449121 | 3.3:-72716265 | MS.gene75477:CDS |
| TGTATGTCGGTGAAGGTTGT+AGG | 0.452936 | 3.3:+72716679 | None:intergenic |
| GTAGGCAGGAGAAGCTTGAT+TGG | 0.456166 | 3.3:+72716697 | None:intergenic |
| ACCAGTCCTCATGTTACTCC+AGG | 0.456222 | 3.3:+72716159 | None:intergenic |
| GTTCTGCTGCAAAGTTTCCC+TGG | 0.467776 | 3.3:-72716177 | MS.gene75477:CDS |
| TGACCGTTCTGGTTCGAACC+GGG | 0.469581 | 3.3:-72716236 | MS.gene75477:CDS |
| TCCTCTTCAATCTCTCGAAT+CGG | 0.471084 | 3.3:+72716445 | None:intergenic |
| AGTATTGTTGAGGAAGCGCC+GGG | 0.487009 | 3.3:-72716388 | MS.gene75477:CDS |
| CCATCAGCCCTGTTCAAACC+AGG | 0.499539 | 3.3:+72716199 | None:intergenic |
| GCAGGAGAAGCTTGATTGGT+AGG | 0.500966 | 3.3:+72716701 | None:intergenic |
| GATTCGGGTTAATCAAAAGC+GGG | 0.502463 | 3.3:+72716473 | None:intergenic |
| CGGGGAAGGTTTGAACGCCC+TGG | 0.503685 | 3.3:-72716217 | MS.gene75477:CDS |
| GTGGGTTTAAGCCGCAAAAT+GGG | 0.507177 | 3.3:-72716330 | MS.gene75477:CDS |
| CTACGGATTCGATGTCGAAA+AGG | 0.508089 | 3.3:-72716590 | MS.gene75477:CDS |
| AATCTTGGAAGCTGATGGAA+TGG | 0.521693 | 3.3:+72716639 | None:intergenic |
| CCTGGTTTGAACAGGGCTGA+TGG | 0.524674 | 3.3:-72716199 | MS.gene75477:CDS |
| CTGGTAGGAGTAATGCTACT+AGG | 0.531882 | 3.3:-72716141 | MS.gene75477:CDS |
| GAGTTTGAATAAACAGGCTA+TGG | 0.532603 | 3.3:-72716416 | MS.gene75477:CDS |
| TTCGACATCGAATCCGTAGA+GGG | 0.537808 | 3.3:+72716594 | None:intergenic |
| CAGGGCGTTCAAACCTTCCC+CGG | 0.541271 | 3.3:+72716218 | None:intergenic |
| CCCTGGAGTAACATGAGGAC+TGG | 0.545437 | 3.3:-72716160 | MS.gene75477:CDS |
| TAGTATTGTTGAGGAAGCGC+CGG | 0.547147 | 3.3:-72716389 | MS.gene75477:CDS |
| CGTGTTCTGGAATCCCTCTA+CGG | 0.549464 | 3.3:-72716607 | MS.gene75477:CDS |
| GTTCTGGTTCGAACCGGGGA+AGG | 0.563380 | 3.3:-72716231 | MS.gene75477:CDS |
| GATTTCATGTATGTCGGTGA+AGG | 0.563490 | 3.3:+72716672 | None:intergenic |
| TGTCGGTGAAGGTTGTAGGC+AGG | 0.564653 | 3.3:+72716683 | None:intergenic |
| GGAGTAACATGAGGACTGGT+AGG | 0.575261 | 3.3:-72716156 | MS.gene75477:CDS |
| TGAACGCCCTGGTTTGAACA+GGG | 0.577798 | 3.3:-72716206 | MS.gene75477:CDS |
| AAAATGGGTATTACAGGGGA+GGG | 0.587136 | 3.3:-72716315 | MS.gene75477:CDS |
| GAGAGCGATTTCATGTATGT+CGG | 0.587586 | 3.3:+72716666 | None:intergenic |
| GCCGCAAAATGGGTATTACA+GGG | 0.593489 | 3.3:-72716320 | MS.gene75477:CDS |
| GACCGTTCTGGTTCGAACCG+GGG | 0.600430 | 3.3:-72716235 | MS.gene75477:CDS |
| TCCGATTCGAGAGATTGAAG+AGG | 0.601664 | 3.3:-72716446 | MS.gene75477:CDS |
| CAAAATGGGTATTACAGGGG+AGG | 0.606255 | 3.3:-72716316 | MS.gene75477:CDS |
| TTTGAATAAACAGGCTATGG+CGG | 0.615531 | 3.3:-72716413 | MS.gene75477:CDS |
| GATGAGAATAAGAACACTCG+TGG | 0.616080 | 3.3:-72716349 | MS.gene75477:CDS |
| TCAAGCCAATGACTCTTCCC+CGG | 0.618018 | 3.3:+72716370 | None:intergenic |
| GTTCTGGTTCGAATCAGGGA+CGG | 0.619690 | 3.3:-72716261 | MS.gene75477:CDS |
| GTTCGAACATTGAACATGGA+CGG | 0.633586 | 3.3:-72716568 | MS.gene75477:CDS |
| TTTCGACATCGAATCCGTAG+AGG | 0.637992 | 3.3:+72716593 | None:intergenic |
| CCAGTCCTCATGTTACTCCA+GGG | 0.639983 | 3.3:+72716160 | None:intergenic |
| AAAGGTTCGAACATTGAACA+TGG | 0.645998 | 3.3:-72716572 | MS.gene75477:CDS |
| ATGAGAATAAGAACACTCGT+GGG | 0.659603 | 3.3:-72716348 | MS.gene75477:CDS |
| TATGGCGGCTAGTATTGTTG+AGG | 0.660904 | 3.3:-72716398 | MS.gene75477:CDS |
| AGTTTCCCTGGAGTAACATG+AGG | 0.671157 | 3.3:-72716165 | MS.gene75477:CDS |
| ATTCGGGTTAATCAAAAGCG+GGG | 0.673297 | 3.3:+72716474 | None:intergenic |
| CATCAGCCCTGTTCAAACCA+GGG | 0.679855 | 3.3:+72716200 | None:intergenic |
| TTCCCCGGTTCGAACCAGAA+CGG | 0.681205 | 3.3:+72716233 | None:intergenic |
| AGATTCGGGTTAATCAAAAG+CGG | 0.681647 | 3.3:+72716472 | None:intergenic |
| CCGCAAAATGGGTATTACAG+GGG | 0.729401 | 3.3:-72716319 | MS.gene75477:CDS |
| GACGGAAAGAAGAAGAAACG+TGG | 0.737712 | 3.3:-72716550 | MS.gene75477:CDS |
| GGAAAGAAGAAGAAACGTGG+CGG | 0.756525 | 3.3:-72716547 | MS.gene75477:CDS |
| GTATTGTTGAGGAAGCGCCG+GGG | 0.806884 | 3.3:-72716387 | MS.gene75477:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TAAGAAGAGTTTGAATAAAC+AGG | - | chr3.3:72716458-72716477 | MS.gene75477:CDS | 25.0% |
| TGCAAAACCTGATTACAAAA+AGG | - | chr3.3:72716365-72716384 | MS.gene75477:CDS | 30.0% | |
| ! | ACAAAAGCCTTTTTGTAATC+AGG | + | chr3.3:72716375-72716394 | None:intergenic | 30.0% |
| AAAGGTTCGAACATTGAACA+TGG | - | chr3.3:72716308-72716327 | MS.gene75477:CDS | 35.0% | |
| AACACGCTTGATTTCAATCT+TGG | + | chr3.3:72716259-72716278 | None:intergenic | 35.0% | |
| ATGAGAATAAGAACACTCGT+GGG | - | chr3.3:72716532-72716551 | MS.gene75477:CDS | 35.0% | |
| ATTTCAATCTTGGAAGCTGA+TGG | + | chr3.3:72716249-72716268 | None:intergenic | 35.0% | |
| GAGTTTGAATAAACAGGCTA+TGG | - | chr3.3:72716464-72716483 | MS.gene75477:CDS | 35.0% | |
| TCTCGAATCGGAAAAAGATT+CGG | + | chr3.3:72716426-72716445 | None:intergenic | 35.0% | |
| TTTGAATAAACAGGCTATGG+CGG | - | chr3.3:72716467-72716486 | MS.gene75477:CDS | 35.0% | |
| ! | AGATTCGGGTTAATCAAAAG+CGG | + | chr3.3:72716411-72716430 | None:intergenic | 35.0% |
| AAAATGGGTATTACAGGGGA+GGG | - | chr3.3:72716565-72716584 | MS.gene75477:CDS | 40.0% | |
| AATCTTGGAAGCTGATGGAA+TGG | + | chr3.3:72716244-72716263 | None:intergenic | 40.0% | |
| CTCGAATCGGAAAAAGATTC+GGG | + | chr3.3:72716425-72716444 | None:intergenic | 40.0% | |
| GAGAGCGATTTCATGTATGT+CGG | + | chr3.3:72716217-72716236 | None:intergenic | 40.0% | |
| GATGAGAATAAGAACACTCG+TGG | - | chr3.3:72716531-72716550 | MS.gene75477:CDS | 40.0% | |
| GATTGAAATCAAGCGTGTTC+TGG | - | chr3.3:72716260-72716279 | MS.gene75477:CDS | 40.0% | |
| GATTTCATGTATGTCGGTGA+AGG | + | chr3.3:72716211-72716230 | None:intergenic | 40.0% | |
| GTTCGAACATTGAACATGGA+CGG | - | chr3.3:72716312-72716331 | MS.gene75477:CDS | 40.0% | |
| TCCTCTTCAATCTCTCGAAT+CGG | + | chr3.3:72716438-72716457 | None:intergenic | 40.0% | |
| ! | ATTCGGGTTAATCAAAAGCG+GGG | + | chr3.3:72716409-72716428 | None:intergenic | 40.0% |
| ! | GATTCGGGTTAATCAAAAGC+GGG | + | chr3.3:72716410-72716429 | None:intergenic | 40.0% |
| AGCCGCAAAATGGGTATTAC+AGG | - | chr3.3:72716559-72716578 | MS.gene75477:CDS | 45.0% | |
| AGTTTCCCTGGAGTAACATG+AGG | - | chr3.3:72716715-72716734 | MS.gene75477:CDS | 45.0% | |
| CAAAATGGGTATTACAGGGG+AGG | - | chr3.3:72716564-72716583 | MS.gene75477:CDS | 45.0% | |
| CCGCAAAATGGGTATTACAG+GGG | - | chr3.3:72716561-72716580 | MS.gene75477:CDS | 45.0% | |
| CTACGGATTCGATGTCGAAA+AGG | - | chr3.3:72716290-72716309 | MS.gene75477:CDS | 45.0% | |
| CTGGTAGGAGTAATGCTACT+AGG | - | chr3.3:72716739-72716758 | MS.gene75477:CDS | 45.0% | |
| GACGGAAAGAAGAAGAAACG+TGG | - | chr3.3:72716330-72716349 | MS.gene75477:CDS | 45.0% | |
| GCCGCAAAATGGGTATTACA+GGG | - | chr3.3:72716560-72716579 | MS.gene75477:CDS | 45.0% | |
| GGAAAGAAGAAGAAACGTGG+CGG | - | chr3.3:72716333-72716352 | MS.gene75477:CDS | 45.0% | |
| GTGGGTTTAAGCCGCAAAAT+GGG | - | chr3.3:72716550-72716569 | MS.gene75477:CDS | 45.0% | |
| TATGGCGGCTAGTATTGTTG+AGG | - | chr3.3:72716482-72716501 | MS.gene75477:CDS | 45.0% | |
| TCGAATCTGTTTGCGAGTTC+TGG | - | chr3.3:72716603-72716622 | MS.gene75477:CDS | 45.0% | |
| TGTATGTCGGTGAAGGTTGT+AGG | + | chr3.3:72716204-72716223 | None:intergenic | 45.0% | |
| TTCGACATCGAATCCGTAGA+GGG | + | chr3.3:72716289-72716308 | None:intergenic | 45.0% | |
| TTTCGACATCGAATCCGTAG+AGG | + | chr3.3:72716290-72716309 | None:intergenic | 45.0% | |
| ! | CCCCTGTAATACCCATTTTG+CGG | + | chr3.3:72716564-72716583 | None:intergenic | 45.0% |
| ! | TAGTATTGTTGAGGAAGCGC+CGG | - | chr3.3:72716491-72716510 | MS.gene75477:CDS | 45.0% |
| ! | TCCGATTCGAGAGATTGAAG+AGG | - | chr3.3:72716434-72716453 | MS.gene75477:CDS | 45.0% |
| ACCAGTCCTCATGTTACTCC+AGG | + | chr3.3:72716724-72716743 | None:intergenic | 50.0% | |
| CATCAGCCCTGTTCAAACCA+GGG | + | chr3.3:72716683-72716702 | None:intergenic | 50.0% | |
| CCAGTCCTCATGTTACTCCA+GGG | + | chr3.3:72716723-72716742 | None:intergenic | 50.0% | |
| CGTGGGTTTAAGCCGCAAAA+TGG | - | chr3.3:72716549-72716568 | MS.gene75477:CDS | 50.0% | |
| GCAGGAGAAGCTTGATTGGT+AGG | + | chr3.3:72716182-72716201 | None:intergenic | 50.0% | |
| GTAGGCAGGAGAAGCTTGAT+TGG | + | chr3.3:72716186-72716205 | None:intergenic | 50.0% | |
| GTTCTGCTGCAAAGTTTCCC+TGG | - | chr3.3:72716703-72716722 | MS.gene75477:CDS | 50.0% | |
| TCAAGCCAATGACTCTTCCC+CGG | + | chr3.3:72716513-72716532 | None:intergenic | 50.0% | |
| ! | GGAGTAACATGAGGACTGGT+AGG | - | chr3.3:72716724-72716743 | MS.gene75477:CDS | 50.0% |
| ! | TGAACGCCCTGGTTTGAACA+GGG | - | chr3.3:72716674-72716693 | MS.gene75477:CDS | 50.0% |
| ! | TTGAACGCCCTGGTTTGAAC+AGG | - | chr3.3:72716673-72716692 | MS.gene75477:CDS | 50.0% |
| !! | AGTATTGTTGAGGAAGCGCC+GGG | - | chr3.3:72716492-72716511 | MS.gene75477:CDS | 50.0% |
| !! | CGTGTTCTGGAATCCCTCTA+CGG | - | chr3.3:72716273-72716292 | MS.gene75477:CDS | 50.0% |
| !! | GCGAGTTCTGGTTCGAATCA+GGG | - | chr3.3:72716615-72716634 | MS.gene75477:CDS | 50.0% |
| !! | GTTCTGGTTCGAATCAGGGA+CGG | - | chr3.3:72716619-72716638 | MS.gene75477:CDS | 50.0% |
| !! | TGCGAGTTCTGGTTCGAATC+AGG | - | chr3.3:72716614-72716633 | MS.gene75477:CDS | 50.0% |
| !! | TTGACCGTTCTGGTTCGAAC+CGG | - | chr3.3:72716643-72716662 | MS.gene75477:CDS | 50.0% |
| AGGGGAGGGTTTGATCGTTC+TGG | - | chr3.3:72716579-72716598 | MS.gene75477:CDS | 55.0% | |
| CCATCAGCCCTGTTCAAACC+AGG | + | chr3.3:72716684-72716703 | None:intergenic | 55.0% | |
| CCCTGGAGTAACATGAGGAC+TGG | - | chr3.3:72716720-72716739 | MS.gene75477:CDS | 55.0% | |
| TGTCGGTGAAGGTTGTAGGC+AGG | + | chr3.3:72716200-72716219 | None:intergenic | 55.0% | |
| ! | CCTGGTTTGAACAGGGCTGA+TGG | - | chr3.3:72716681-72716700 | MS.gene75477:CDS | 55.0% |
| ! | TTCCCCGGTTCGAACCAGAA+CGG | + | chr3.3:72716650-72716669 | None:intergenic | 55.0% |
| !! | GTATTGTTGAGGAAGCGCCG+GGG | - | chr3.3:72716493-72716512 | MS.gene75477:CDS | 55.0% |
| !! | TGACCGTTCTGGTTCGAACC+GGG | - | chr3.3:72716644-72716663 | MS.gene75477:CDS | 55.0% |
| CAGGGACGGTTTGACCGTTC+TGG | - | chr3.3:72716633-72716652 | MS.gene75477:CDS | 60.0% | |
| ! | CAGGGCGTTCAAACCTTCCC+CGG | + | chr3.3:72716665-72716684 | None:intergenic | 60.0% |
| !! | AAGCGCCGGGGAAGAGTCAT+TGG | - | chr3.3:72716505-72716524 | MS.gene75477:CDS | 60.0% |
| !! | GACCGTTCTGGTTCGAACCG+GGG | - | chr3.3:72716645-72716664 | MS.gene75477:CDS | 60.0% |
| !! | GTTCTGGTTCGAACCGGGGA+AGG | - | chr3.3:72716649-72716668 | MS.gene75477:CDS | 60.0% |
| CGGGGAAGGTTTGAACGCCC+TGG | - | chr3.3:72716663-72716682 | MS.gene75477:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 72716138 | 72716764 | 72716138 | ID=MS.gene75477 |
| chr3.3 | mRNA | 72716138 | 72716764 | 72716138 | ID=MS.gene75477.t1;Parent=MS.gene75477 |
| chr3.3 | exon | 72716138 | 72716764 | 72716138 | ID=MS.gene75477.t1.exon1;Parent=MS.gene75477.t1 |
| chr3.3 | CDS | 72716138 | 72716764 | 72716138 | ID=cds.MS.gene75477.t1;Parent=MS.gene75477.t1 |
| Gene Sequence |
| Protein sequence |
