Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76949.t1 | RHN44099.1 | 86.7 | 444 | 50 | 3 | 1 | 437 | 3 | 444 | 8.80E-207 | 729.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76949.t1 | A0A396GSG1 | 86.7 | 444 | 50 | 3 | 1 | 437 | 3 | 444 | 6.4e-207 | 729.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene76949 | 0.80256 | 5.29E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene76949 | 0.818106 | 2.33E-52 | -1.69E-46 |
| MS.gene049378 | MS.gene76949 | 0.867834 | 1.02E-65 | -1.69E-46 |
| MS.gene049669 | MS.gene76949 | 0.844474 | 7.39E-59 | -1.69E-46 |
| MS.gene050442 | MS.gene76949 | 0.816515 | 5.31E-52 | -1.69E-46 |
| MS.gene050605 | MS.gene76949 | 0.817934 | 2.55E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene76949 | 0.805673 | 1.19E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene76949 | 0.805005 | 1.64E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene76949 | 0.852842 | 3.54E-61 | -1.69E-46 |
| MS.gene050953 | MS.gene76949 | 0.835338 | 1.78E-56 | -1.69E-46 |
| MS.gene051368 | MS.gene76949 | 0.80409 | 2.55E-49 | -1.69E-46 |
| MS.gene051924 | MS.gene76949 | -0.822696 | 2.06E-53 | -1.69E-46 |
| MS.gene051926 | MS.gene76949 | -0.805432 | 1.34E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene76949 | 0.82425 | 8.94E-54 | -1.69E-46 |
| MS.gene052389 | MS.gene76949 | 0.807602 | 4.66E-50 | -1.69E-46 |
| MS.gene052426 | MS.gene76949 | 0.809404 | 1.92E-50 | -1.69E-46 |
| MS.gene052586 | MS.gene76949 | 0.811085 | 8.35E-51 | -1.69E-46 |
| MS.gene052674 | MS.gene76949 | 0.828278 | 9.82E-55 | -1.69E-46 |
| MS.gene052675 | MS.gene76949 | 0.82282 | 1.93E-53 | -1.69E-46 |
| MS.gene052677 | MS.gene76949 | 0.827891 | 1.22E-54 | -1.69E-46 |
| MS.gene052954 | MS.gene76949 | 0.800095 | 1.69E-48 | -1.69E-46 |
| MS.gene053166 | MS.gene76949 | 0.832386 | 9.74E-56 | -1.69E-46 |
| MS.gene05415 | MS.gene76949 | 0.824507 | 7.77E-54 | -1.69E-46 |
| MS.gene054291 | MS.gene76949 | -0.813401 | 2.61E-51 | -1.69E-46 |
| MS.gene054405 | MS.gene76949 | 0.826703 | 2.35E-54 | -1.69E-46 |
| MS.gene054468 | MS.gene76949 | 0.842588 | 2.36E-58 | -1.69E-46 |
| MS.gene054472 | MS.gene76949 | 0.801355 | 9.36E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene76949 | 0.815507 | 8.92E-52 | -1.69E-46 |
| MS.gene054559 | MS.gene76949 | 0.818335 | 2.07E-52 | -1.69E-46 |
| MS.gene055623 | MS.gene76949 | 0.819885 | 9.18E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene76949 | 0.861281 | 1.15E-63 | -1.69E-46 |
| MS.gene055818 | MS.gene76949 | 0.814821 | 1.27E-51 | -1.69E-46 |
| MS.gene05604 | MS.gene76949 | 0.800786 | 1.22E-48 | -1.69E-46 |
| MS.gene056174 | MS.gene76949 | 0.8002 | 1.61E-48 | -1.69E-46 |
| MS.gene056480 | MS.gene76949 | 0.809014 | 2.33E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene76949 | 0.834969 | 2.20E-56 | -1.69E-46 |
| MS.gene056779 | MS.gene76949 | 0.818633 | 1.77E-52 | -1.69E-46 |
| MS.gene056873 | MS.gene76949 | 0.838303 | 3.11E-57 | -1.69E-46 |
| MS.gene057026 | MS.gene76949 | 0.824666 | 7.13E-54 | -1.69E-46 |
| MS.gene057156 | MS.gene76949 | -0.823417 | 1.40E-53 | -1.69E-46 |
| MS.gene057194 | MS.gene76949 | 0.817411 | 3.34E-52 | -1.69E-46 |
| MS.gene05761 | MS.gene76949 | 0.821504 | 3.90E-53 | -1.69E-46 |
| MS.gene058146 | MS.gene76949 | 0.834022 | 3.81E-56 | -1.69E-46 |
| MS.gene058502 | MS.gene76949 | 0.809605 | 1.74E-50 | -1.69E-46 |
| MS.gene058595 | MS.gene76949 | 0.808623 | 2.83E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene76949 | 0.814069 | 1.86E-51 | -1.69E-46 |
| MS.gene059161 | MS.gene76949 | 0.805257 | 1.46E-49 | -1.69E-46 |
| MS.gene059952 | MS.gene76949 | 0.800891 | 1.17E-48 | -1.69E-46 |
| MS.gene060011 | MS.gene76949 | 0.81754 | 3.13E-52 | -1.69E-46 |
| MS.gene060167 | MS.gene76949 | 0.801525 | 8.64E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene76949 | 0.868452 | 6.46E-66 | -1.69E-46 |
| MS.gene060373 | MS.gene76949 | 0.812529 | 4.05E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene76949 | 0.822749 | 2.01E-53 | -1.69E-46 |
| MS.gene060572 | MS.gene76949 | 0.806001 | 1.02E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene76949 | 0.823806 | 1.14E-53 | -1.69E-46 |
| MS.gene060685 | MS.gene76949 | 0.827563 | 1.46E-54 | -1.69E-46 |
| MS.gene060802 | MS.gene76949 | 0.821935 | 3.10E-53 | -1.69E-46 |
| MS.gene060803 | MS.gene76949 | 0.805361 | 1.39E-49 | -1.69E-46 |
| MS.gene060879 | MS.gene76949 | 0.816603 | 5.08E-52 | -1.69E-46 |
| MS.gene060998 | MS.gene76949 | 0.828844 | 7.17E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76949.t1 | MTR_7g007590 | 82.883 | 444 | 42 | 5 | 1 | 437 | 1 | 417 | 0.0 | 707 |
| MS.gene76949.t1 | MTR_8g047200 | 73.868 | 287 | 37 | 5 | 141 | 410 | 1 | 266 | 1.08e-136 | 393 |
| MS.gene76949.t1 | MTR_8g006760 | 42.154 | 325 | 159 | 11 | 34 | 333 | 20 | 340 | 5.23e-63 | 209 |
| MS.gene76949.t1 | MTR_7g407120 | 65.000 | 80 | 10 | 1 | 260 | 339 | 1 | 62 | 2.00e-25 | 104 |
| MS.gene76949.t1 | MTR_4g087360 | 30.982 | 326 | 180 | 11 | 48 | 336 | 14 | 331 | 6.62e-25 | 106 |
| MS.gene76949.t1 | MTR_4g087360 | 31.930 | 285 | 169 | 9 | 48 | 315 | 42 | 318 | 1.17e-24 | 106 |
| MS.gene76949.t1 | MTR_6g066120 | 74.576 | 59 | 9 | 1 | 384 | 436 | 4 | 62 | 2.45e-19 | 82.8 |
| MS.gene76949.t1 | MTR_4g087350 | 32.402 | 179 | 113 | 4 | 125 | 299 | 85 | 259 | 5.19e-17 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76949.t1 | AT4G37440 | 32.317 | 328 | 161 | 10 | 29 | 334 | 52 | 340 | 9.01e-38 | 142 |
| MS.gene76949.t1 | AT4G37440 | 33.866 | 313 | 176 | 10 | 29 | 334 | 52 | 340 | 1.00e-37 | 142 |
| MS.gene76949.t1 | AT4G37440 | 33.866 | 313 | 176 | 10 | 29 | 334 | 52 | 340 | 1.14e-37 | 143 |
| MS.gene76949.t1 | AT3G59670 | 33.080 | 263 | 150 | 10 | 124 | 372 | 130 | 380 | 8.17e-29 | 119 |
| MS.gene76949.t1 | AT3G50040 | 50.000 | 110 | 54 | 1 | 122 | 230 | 104 | 213 | 2.67e-24 | 104 |
| MS.gene76949.t1 | AT3G50040 | 50.000 | 110 | 54 | 1 | 122 | 230 | 104 | 213 | 2.67e-24 | 104 |
| MS.gene76949.t1 | AT3G50040 | 50.000 | 110 | 54 | 1 | 122 | 230 | 104 | 213 | 2.67e-24 | 104 |
| MS.gene76949.t1 | AT3G50040 | 50.000 | 110 | 54 | 1 | 122 | 230 | 104 | 213 | 3.17e-24 | 103 |
Find 79 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAATATAATTGGGAATTC+TGG | 0.232894 | 7.2:+90349516 | MS.gene76949:CDS |
| CATTTAGAGCGCCACATTAT+AGG | 0.242366 | 7.2:-90351164 | None:intergenic |
| CTATAATGTGGCGCTCTAAA+TGG | 0.246676 | 7.2:+90351165 | MS.gene76949:CDS |
| AATGTGGAAGTTAATATAAT+TGG | 0.249082 | 7.2:+90349507 | MS.gene76949:CDS |
| CTGCTCTTCAACTGATTCAT+TGG | 0.289020 | 7.2:-90352789 | None:intergenic |
| ATCTTGTCAAGTTCCAATTC+TGG | 0.290792 | 7.2:-90349348 | None:intergenic |
| TAGGACCCAGTTTGAGGTTC+AGG | 0.293038 | 7.2:+90352157 | MS.gene76949:CDS |
| AAGTTTGCAGTAGACGATTT+TGG | 0.304395 | 7.2:+90351281 | MS.gene76949:CDS |
| TTTCTCCCTGAACCTCAAAC+TGG | 0.332711 | 7.2:-90352163 | None:intergenic |
| CTTACCCTCCTTGTGTTCCT+AGG | 0.334663 | 7.2:-90352899 | None:intergenic |
| AAGATTGTAGAAGAAGAAAA+AGG | 0.334703 | 7.2:+90349366 | MS.gene76949:CDS |
| AACATAGTTGGGCCATCTAA+TGG | 0.350082 | 7.2:+90351975 | MS.gene76949:CDS |
| CTTTGAATTCCCTCAGATCT+AGG | 0.356218 | 7.2:-90351317 | None:intergenic |
| AACCTCAAACTGGGTCCTAT+TGG | 0.372953 | 7.2:-90352153 | None:intergenic |
| GTTGCAGAACAGAACTTTCC+AGG | 0.381277 | 7.2:-90351945 | None:intergenic |
| AGTTCAAGTTCTAGTTCCTT+TGG | 0.387269 | 7.2:+90349585 | MS.gene76949:CDS |
| AATTGGGAATTCTGGTTTCA+AGG | 0.402572 | 7.2:+90349524 | MS.gene76949:CDS |
| GCTCATGATGGTCCCGTAGA+AGG | 0.405262 | 7.2:+90351535 | MS.gene76949:CDS |
| GGTAAAGAAATTCTGGTTCC+AGG | 0.416452 | 7.2:+90352035 | MS.gene76949:CDS |
| ATGTGGAAGTTAATATAATT+GGG | 0.418323 | 7.2:+90349508 | MS.gene76949:CDS |
| ATAGGAAAAGAAGATAATAA+TGG | 0.418737 | 7.2:+90349393 | MS.gene76949:CDS |
| AGGAGGGTAAGGAGGAAGTT+TGG | 0.434590 | 7.2:+90352911 | MS.gene76949:CDS |
| TCTTGTCAAGTTCCAATTCT+GGG | 0.435080 | 7.2:-90349347 | None:intergenic |
| GAACGATTAAATCCATTAGA+TGG | 0.440535 | 7.2:-90351987 | None:intergenic |
| GCAACTCAATCGAACATAGT+TGG | 0.450765 | 7.2:+90351963 | MS.gene76949:CDS |
| AAGGTAATGCTGATAATGTT+GGG | 0.452199 | 7.2:+90351775 | MS.gene76949:intron |
| ATTGGGAATTCTGGTTTCAA+GGG | 0.462911 | 7.2:+90349525 | MS.gene76949:CDS |
| ACTAGTTCTGATTCTGCATT+CGG | 0.464087 | 7.2:+90349618 | MS.gene76949:CDS |
| ATCATCATGAAAACCTTCTA+CGG | 0.468644 | 7.2:-90351548 | None:intergenic |
| CAACTCAATCGAACATAGTT+GGG | 0.478639 | 7.2:+90351964 | MS.gene76949:CDS |
| CTACGGGACCATCATGAGCT+TGG | 0.481763 | 7.2:-90351531 | None:intergenic |
| AGGACCCAGTTTGAGGTTCA+GGG | 0.482936 | 7.2:+90352158 | MS.gene76949:CDS |
| CTTCAGTTGAGTCTGCCAAT+AGG | 0.488684 | 7.2:+90352138 | MS.gene76949:CDS |
| TTACCCTCCTTGTGTTCCTA+GGG | 0.489585 | 7.2:-90352898 | None:intergenic |
| TGCCAATAGGACCCAGTTTG+AGG | 0.495444 | 7.2:+90352151 | MS.gene76949:CDS |
| GAAGGTAATGCTGATAATGT+TGG | 0.499295 | 7.2:+90351774 | MS.gene76949:intron |
| TGAATCGCAGCGGAGGCATA+AGG | 0.501523 | 7.2:+90349656 | MS.gene76949:CDS |
| GAATTCTGGTTTCAAGGGTG+TGG | 0.510002 | 7.2:+90349530 | MS.gene76949:CDS |
| GTTCCTAGGGAAATGTGTCT+TGG | 0.512760 | 7.2:-90352885 | None:intergenic |
| AGATCAAGTTAAACGATATG+TGG | 0.513455 | 7.2:+90351799 | MS.gene76949:CDS |
| CTAGGAACACAAGGAGGGTA+AGG | 0.514099 | 7.2:+90352900 | MS.gene76949:CDS |
| AAGTCATGTGGAGAAAGAAC+AGG | 0.518229 | 7.2:+90351345 | MS.gene76949:CDS |
| TTGTAGAGATGAGGAGAATG+TGG | 0.520186 | 7.2:+90349491 | MS.gene76949:CDS |
| TTCTCCCTGAACCTCAAACT+GGG | 0.539592 | 7.2:-90352162 | None:intergenic |
| AAAAGTTAACTGATCATTGG+AGG | 0.545239 | 7.2:+90351129 | MS.gene76949:CDS |
| AAGTTGAGAATTTGAAAACT+CGG | 0.545310 | 7.2:+90351898 | MS.gene76949:CDS |
| TTCTGCATTCGGTGATTCTG+AGG | 0.550235 | 7.2:+90349629 | MS.gene76949:CDS |
| TCAGATTTAGCGAAACTACC+TGG | 0.561539 | 7.2:-90352053 | None:intergenic |
| ACCGTGAAATATGAAAATCC+TGG | 0.561681 | 7.2:+90351927 | MS.gene76949:CDS |
| TGTGTCTTGGTTGTTGAACA+TGG | 0.565981 | 7.2:-90352872 | None:intergenic |
| TGCATTCGGTGATTCTGAGG+AGG | 0.569756 | 7.2:+90349632 | MS.gene76949:CDS |
| AATGCATTATCAACTCGAGA+AGG | 0.574177 | 7.2:+90352107 | MS.gene76949:CDS |
| CACATTTCCCTAGGAACACA+AGG | 0.576001 | 7.2:+90352891 | MS.gene76949:CDS |
| GTCGTTGTCTTGTAGAGATG+AGG | 0.576650 | 7.2:+90349482 | MS.gene76949:CDS |
| CAAGTCAGTACCTAGATCTG+AGG | 0.578521 | 7.2:+90351307 | MS.gene76949:CDS |
| TCATCATGAAAACCTTCTAC+GGG | 0.586519 | 7.2:-90351547 | None:intergenic |
| GAAACATACCTCAATAGAAG+TGG | 0.588810 | 7.2:-90349690 | None:intergenic |
| AGGTAATGCTGATAATGTTG+GGG | 0.590800 | 7.2:+90351776 | MS.gene76949:intron |
| GGAGAAAGCCACTTCTATTG+AGG | 0.591650 | 7.2:+90349682 | MS.gene76949:CDS |
| CGCAGCGGAGGCATAAGGTG+TGG | 0.593949 | 7.2:+90349661 | MS.gene76949:CDS |
| GATCAAGTTAAACGATATGT+GGG | 0.594999 | 7.2:+90351800 | MS.gene76949:CDS |
| AGAACCAAAAGAACAAAATG+TGG | 0.596405 | 7.2:+90349446 | MS.gene76949:CDS |
| GGAACACAAGGAGGGTAAGG+AGG | 0.597368 | 7.2:+90352903 | MS.gene76949:CDS |
| CAACCAAGACACATTTCCCT+AGG | 0.604185 | 7.2:+90352882 | MS.gene76949:CDS |
| GAAATACGTAAAAGAGATTG+CGG | 0.605017 | 7.2:+90351226 | MS.gene76949:CDS |
| TTCAAAGGACTAAAGTCATG+TGG | 0.606978 | 7.2:+90351333 | MS.gene76949:CDS |
| AAGTCAGTACCTAGATCTGA+GGG | 0.610939 | 7.2:+90351308 | MS.gene76949:CDS |
| AGTTAACTGATCATTGGAGG+AGG | 0.614517 | 7.2:+90351132 | MS.gene76949:CDS |
| GGTACATCTTTCCTATAATG+TGG | 0.617709 | 7.2:+90351153 | MS.gene76949:CDS |
| ATGCATTATCAACTCGAGAA+GGG | 0.618272 | 7.2:+90352108 | MS.gene76949:CDS |
| AGGAGGTTGAATCGCAGCGG+AGG | 0.622642 | 7.2:+90349649 | MS.gene76949:CDS |
| CTATTGGCAGACTCAACTGA+AGG | 0.634161 | 7.2:-90352137 | None:intergenic |
| ATTTCCCTAGGAACACAAGG+AGG | 0.641761 | 7.2:+90352894 | MS.gene76949:CDS |
| ACTAGTGTCTGTATGACCAA+AGG | 0.642765 | 7.2:-90349601 | None:intergenic |
| CTAGATCTGAGGGAATTCAA+AGG | 0.647893 | 7.2:+90351318 | MS.gene76949:CDS |
| TCAAGTTTCAGAGTCTGACA+TGG | 0.659316 | 7.2:+90352829 | MS.gene76949:CDS |
| TTTCCCTAGGAACACAAGGA+GGG | 0.664488 | 7.2:+90352895 | MS.gene76949:CDS |
| CTGAGGAGGTTGAATCGCAG+CGG | 0.687151 | 7.2:+90349646 | MS.gene76949:CDS |
| GGGTGTGGAAGATAATTGTG+TGG | 0.726932 | 7.2:+90349545 | MS.gene76949:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAAAAACATTATATTA+TGG | - | chr7.2:90351594-90351613 | None:intergenic | 10.0% |
| !! | ATGAAAAAACATTATATTAT+GGG | - | chr7.2:90351593-90351612 | None:intergenic | 10.0% |
| !!! | AATAAAAAGAACATTTTAAT+TGG | - | chr7.2:90350709-90350728 | None:intergenic | 10.0% |
| !!! | TTTGTTTTACTTTTTAAATA+TGG | + | chr7.2:90349867-90349886 | MS.gene76949:intron | 10.0% |
| !! | ATCATATATAGAAGATAAAA+AGG | - | chr7.2:90350842-90350861 | None:intergenic | 15.0% |
| !! | AAAAACATTATATTATGGGA+TGG | - | chr7.2:90351589-90351608 | None:intergenic | 20.0% |
| !! | AATGTGGAAGTTAATATAAT+TGG | + | chr7.2:90349507-90349526 | MS.gene76949:CDS | 20.0% |
| !! | AGAAATGATTATAAAAGTTG+TGG | - | chr7.2:90352338-90352357 | None:intergenic | 20.0% |
| !! | ATAGGAAAAGAAGATAATAA+TGG | + | chr7.2:90349393-90349412 | MS.gene76949:CDS | 20.0% |
| !! | ATATATAGAAGATAAAAAGG+AGG | - | chr7.2:90350839-90350858 | None:intergenic | 20.0% |
| !! | ATGTGGAAGTTAATATAATT+GGG | + | chr7.2:90349508-90349527 | MS.gene76949:CDS | 20.0% |
| !! | ATTGAAAAACCTAACAAAAA+AGG | + | chr7.2:90350526-90350545 | MS.gene76949:intron | 20.0% |
| !! | TTTCTTAATAGTTTCTCTTA+TGG | - | chr7.2:90350095-90350114 | None:intergenic | 20.0% |
| !!! | AATTTTAAAATCATTCACCA+AGG | - | chr7.2:90352388-90352407 | None:intergenic | 20.0% |
| !!! | ATTATGAACATTTTTCAAAC+TGG | + | chr7.2:90351712-90351731 | MS.gene76949:intron | 20.0% |
| !!! | CAATCTTTTAAAAATCAAAC+TGG | - | chr7.2:90349938-90349957 | None:intergenic | 20.0% |
| !!! | CAATTCAATTAATCCTTTTT+TGG | + | chr7.2:90350444-90350463 | MS.gene76949:intron | 20.0% |
| !!! | GAAGCAATAAAACAATTTTT+TGG | + | chr7.2:90350477-90350496 | MS.gene76949:intron | 20.0% |
| ! | AAGATTGTAGAAGAAGAAAA+AGG | + | chr7.2:90349366-90349385 | MS.gene76949:CDS | 25.0% |
| ! | AAGTTGAGAATTTGAAAACT+CGG | + | chr7.2:90351898-90351917 | MS.gene76949:CDS | 25.0% |
| ! | ACTCCAAACATTAAAAGTAA+AGG | - | chr7.2:90352624-90352643 | None:intergenic | 25.0% |
| ! | AGAAAAAGTTAACTGATCAT+TGG | + | chr7.2:90351126-90351145 | MS.gene76949:CDS | 25.0% |
| ! | AGATCTAGAAATTAATCAGT+TGG | + | chr7.2:90350114-90350133 | MS.gene76949:intron | 25.0% |
| ! | GTTAATATAATTGGGAATTC+TGG | + | chr7.2:90349516-90349535 | MS.gene76949:CDS | 25.0% |
| ! | TAATCAGTTGGATCAAAATA+TGG | + | chr7.2:90350126-90350145 | MS.gene76949:intron | 25.0% |
| ! | TACATCATAAATGTCATGTT+TGG | + | chr7.2:90350975-90350994 | MS.gene76949:intron | 25.0% |
| ! | TACTATGGTATGAAATTACT+TGG | + | chr7.2:90351425-90351444 | MS.gene76949:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+CGG | + | chr7.2:90350146-90350165 | MS.gene76949:intron | 25.0% |
| ! | TTCTTGTAATGTTATGATTC+AGG | + | chr7.2:90352754-90352773 | MS.gene76949:intron | 25.0% |
| ! | TTTGTTTCATTGATATGAGA+AGG | + | chr7.2:90351756-90351775 | MS.gene76949:intron | 25.0% |
| !! | ATTTTCAAATTACCTTGTGT+TGG | + | chr7.2:90350998-90351017 | MS.gene76949:intron | 25.0% |
| !! | ATTTTCAATTATGTCAACGA+AGG | - | chr7.2:90351859-90351878 | None:intergenic | 25.0% |
| !! | ATTTTGAACAACTTTCTTCA+AGG | - | chr7.2:90352298-90352317 | None:intergenic | 25.0% |
| !! | TATTTTACTCTACACATGAA+AGG | - | chr7.2:90352444-90352463 | None:intergenic | 25.0% |
| !!! | AAAACAATTTTTTGGCCTAT+AGG | + | chr7.2:90350485-90350504 | MS.gene76949:intron | 25.0% |
| !!! | AAAGATTGATGTTGTTTTTG+TGG | + | chr7.2:90349950-90349969 | MS.gene76949:intron | 25.0% |
| !!! | ATGTTCTTTTTATTTCACAC+CGG | + | chr7.2:90350715-90350734 | MS.gene76949:intron | 25.0% |
| !!! | GCTGCTATGTATTTTTTATA+AGG | + | chr7.2:90351020-90351039 | MS.gene76949:intron | 25.0% |
| !!! | GTACCTTTACTTTTAATGTT+TGG | + | chr7.2:90352618-90352637 | MS.gene76949:intron | 25.0% |
| !!! | TGTTGTTAATGTTGTTTTTG+TGG | + | chr7.2:90350277-90350296 | MS.gene76949:intron | 25.0% |
| AAAAGTTAACTGATCATTGG+AGG | + | chr7.2:90351129-90351148 | MS.gene76949:CDS | 30.0% | |
| AACAAAGAATACAGATACCA+TGG | - | chr7.2:90352486-90352505 | None:intergenic | 30.0% | |
| AAGTATCTGAACATGTTATC+AGG | - | chr7.2:90350675-90350694 | None:intergenic | 30.0% | |
| AATAAAAACCAAGCTCATGA+TGG | + | chr7.2:90351523-90351542 | MS.gene76949:CDS | 30.0% | |
| AATACGTTTAAACACTGACA+CGG | - | chr7.2:90351087-90351106 | None:intergenic | 30.0% | |
| AGAACCAAAAGAACAAAATG+TGG | + | chr7.2:90349446-90349465 | MS.gene76949:CDS | 30.0% | |
| AGATCAAGTTAAACGATATG+TGG | + | chr7.2:90351799-90351818 | MS.gene76949:CDS | 30.0% | |
| ATCATCATGAAAACCTTCTA+CGG | - | chr7.2:90351551-90351570 | None:intergenic | 30.0% | |
| CATAGTACGAGAAAAAACAA+TGG | - | chr7.2:90351412-90351431 | None:intergenic | 30.0% | |
| CATGTTCAGATACTTCATTT+AGG | + | chr7.2:90350680-90350699 | MS.gene76949:intron | 30.0% | |
| GAAATACGTAAAAGAGATTG+CGG | + | chr7.2:90351226-90351245 | MS.gene76949:CDS | 30.0% | |
| GAACGATTAAATCCATTAGA+TGG | - | chr7.2:90351990-90352009 | None:intergenic | 30.0% | |
| GATCAAGTTAAACGATATGT+GGG | + | chr7.2:90351800-90351819 | MS.gene76949:CDS | 30.0% | |
| GTTAAAGTGTGAATCAAACA+AGG | + | chr7.2:90351635-90351654 | MS.gene76949:intron | 30.0% | |
| TTATCCCAAATAAATGTCCT+TGG | + | chr7.2:90352360-90352379 | MS.gene76949:intron | 30.0% | |
| TTCTATATTTCGGACATTAG+TGG | + | chr7.2:90350900-90350919 | MS.gene76949:intron | 30.0% | |
| TTGTCAAATAAAGGCTATAG+CGG | - | chr7.2:90352590-90352609 | None:intergenic | 30.0% | |
| TTTAGTTATTGAACCGAACT+AGG | + | chr7.2:90349720-90349739 | MS.gene76949:intron | 30.0% | |
| ! | AAGGTAATGCTGATAATGTT+GGG | + | chr7.2:90351775-90351794 | MS.gene76949:intron | 30.0% |
| ! | GTTTCTCTTATGGTTTTTCT+AGG | - | chr7.2:90350085-90350104 | None:intergenic | 30.0% |
| ! | TCAACCACATTTTGTTCTTT+TGG | - | chr7.2:90349453-90349472 | None:intergenic | 30.0% |
| ! | TCCAGGATTTTCATATTTCA+CGG | - | chr7.2:90351931-90351950 | None:intergenic | 30.0% |
| ! | TTTTCCATTCTACGACAAAT+GGG | - | chr7.2:90352670-90352689 | None:intergenic | 30.0% |
| ! | TTTTGCTGGTAAAGAAATTC+TGG | + | chr7.2:90352028-90352047 | MS.gene76949:CDS | 30.0% |
| !! | ATTAAAAGTAAAGGTACCAG+TGG | - | chr7.2:90352615-90352634 | None:intergenic | 30.0% |
| !! | CTGTATTTCATAACTTGTTG+TGG | + | chr7.2:90350781-90350800 | MS.gene76949:intron | 30.0% |
| !! | GCATGAATATCCTTAGTTTT+AGG | + | chr7.2:90350617-90350636 | MS.gene76949:intron | 30.0% |
| !! | GTTTTATTGCTTCTTCCTAT+AGG | - | chr7.2:90350470-90350489 | None:intergenic | 30.0% |
| !! | TAATGTTATGATTCAGGTTG+AGG | + | chr7.2:90352760-90352779 | MS.gene76949:intron | 30.0% |
| !!! | CATTGTTTTTTCTCGTACTA+TGG | + | chr7.2:90351410-90351429 | MS.gene76949:CDS | 30.0% |
| !!! | TGGTTAGTTCCTTTTTTGTT+AGG | - | chr7.2:90350538-90350557 | None:intergenic | 30.0% |
| !!! | TTAATCCTTTTTTGGCCTAT+AGG | + | chr7.2:90350452-90350471 | MS.gene76949:intron | 30.0% |
| AAAACAAGATGAACCAACCA+TGG | - | chr7.2:90349828-90349847 | None:intergenic | 35.0% | |
| AATGCATTATCAACTCGAGA+AGG | + | chr7.2:90352107-90352126 | MS.gene76949:CDS | 35.0% | |
| ACCGTGAAATATGAAAATCC+TGG | + | chr7.2:90351927-90351946 | MS.gene76949:CDS | 35.0% | |
| ACTATCAACGCAAAATACAC+TGG | - | chr7.2:90351473-90351492 | None:intergenic | 35.0% | |
| AGAAGGAATGTGCAATTGAT+TGG | + | chr7.2:90350563-90350582 | MS.gene76949:intron | 35.0% | |
| ATCCTATTACGCAGAGTAAT+TGG | - | chr7.2:90352699-90352718 | None:intergenic | 35.0% | |
| ATCTTGTCAAGTTCCAATTC+TGG | - | chr7.2:90349351-90349370 | None:intergenic | 35.0% | |
| ATGCATTATCAACTCGAGAA+GGG | + | chr7.2:90352108-90352127 | MS.gene76949:CDS | 35.0% | |
| ATGTGCAATTGATTGGATTG+AGG | + | chr7.2:90350570-90350589 | MS.gene76949:intron | 35.0% | |
| CAACTCAATCGAACATAGTT+GGG | + | chr7.2:90351964-90351983 | MS.gene76949:CDS | 35.0% | |
| CGAAATATAGAACACTGACA+CGG | - | chr7.2:90350892-90350911 | None:intergenic | 35.0% | |
| CGTGTCAGTGTTCTATATTT+CGG | + | chr7.2:90350890-90350909 | MS.gene76949:intron | 35.0% | |
| GAAACATACCTCAATAGAAG+TGG | - | chr7.2:90349693-90349712 | None:intergenic | 35.0% | |
| GAAGAAGAAAAAGGTGACAT+AGG | + | chr7.2:90349375-90349394 | MS.gene76949:CDS | 35.0% | |
| GATTGAACTAGGTTTAACCA+TGG | + | chr7.2:90349808-90349827 | MS.gene76949:intron | 35.0% | |
| GGTACATCTTTCCTATAATG+TGG | + | chr7.2:90351153-90351172 | MS.gene76949:CDS | 35.0% | |
| GTCATGTAAGTGTTCTTGTA+AGG | + | chr7.2:90350012-90350031 | MS.gene76949:intron | 35.0% | |
| TCATCATGAAAACCTTCTAC+GGG | - | chr7.2:90351550-90351569 | None:intergenic | 35.0% | |
| TCTTGTCAAGTTCCAATTCT+GGG | - | chr7.2:90349350-90349369 | None:intergenic | 35.0% | |
| TGTCAAATAAAGGCTATAGC+GGG | - | chr7.2:90352589-90352608 | None:intergenic | 35.0% | |
| TTCAAAGGACTAAAGTCATG+TGG | + | chr7.2:90351333-90351352 | MS.gene76949:CDS | 35.0% | |
| TTCTTCCTATAGGCCAAAAA+AGG | - | chr7.2:90350460-90350479 | None:intergenic | 35.0% | |
| ! | AAGTTTGCAGTAGACGATTT+TGG | + | chr7.2:90351281-90351300 | MS.gene76949:CDS | 35.0% |
| ! | AGGTAATGCTGATAATGTTG+GGG | + | chr7.2:90351776-90351795 | MS.gene76949:intron | 35.0% |
| ! | CATAATTCTGCTTCTTTTGC+TGG | + | chr7.2:90352014-90352033 | MS.gene76949:CDS | 35.0% |
| ! | GAAGGTAATGCTGATAATGT+TGG | + | chr7.2:90351774-90351793 | MS.gene76949:intron | 35.0% |
| ! | GTCTTTGATAATCTGGAGTT+CGG | + | chr7.2:90350329-90350348 | MS.gene76949:intron | 35.0% |
| ! | GTTTTCCATTCTACGACAAA+TGG | - | chr7.2:90352671-90352690 | None:intergenic | 35.0% |
| !! | AATTGGGAATTCTGGTTTCA+AGG | + | chr7.2:90349524-90349543 | MS.gene76949:CDS | 35.0% |
| !! | ACAAAAGTGTCTCTTTACAC+CGG | - | chr7.2:90350759-90350778 | None:intergenic | 35.0% |
| !! | ACTAGTTCTGATTCTGCATT+CGG | + | chr7.2:90349618-90349637 | MS.gene76949:CDS | 35.0% |
| !! | AGTTCAAGTTCTAGTTCCTT+TGG | + | chr7.2:90349585-90349604 | MS.gene76949:CDS | 35.0% |
| !! | ATTGGGAATTCTGGTTTCAA+GGG | + | chr7.2:90349525-90349544 | MS.gene76949:CDS | 35.0% |
| !! | TCTTAACTCTCTGGTTCTTA+GGG | + | chr7.2:90350300-90350319 | MS.gene76949:intron | 35.0% |
| !! | TGAGCTTGGTTTTTATTCTC+TGG | - | chr7.2:90351520-90351539 | None:intergenic | 35.0% |
| !! | TTTTTGTGGTCTTAACTCTC+TGG | + | chr7.2:90350291-90350310 | MS.gene76949:intron | 35.0% |
| AAAAACCCGAGTTTGAATCC+TGG | - | chr7.2:90350393-90350412 | None:intergenic | 40.0% | |
| AACATAGTTGGGCCATCTAA+TGG | + | chr7.2:90351975-90351994 | MS.gene76949:CDS | 40.0% | |
| AACCAATTGAAGCATGACTC+CGG | + | chr7.2:90349893-90349912 | MS.gene76949:intron | 40.0% | |
| AAGAATACAGATACCATGGC+CGG | - | chr7.2:90352482-90352501 | None:intergenic | 40.0% | |
| AAGTCAGTACCTAGATCTGA+GGG | + | chr7.2:90351308-90351327 | MS.gene76949:CDS | 40.0% | |
| AAGTCATGTGGAGAAAGAAC+AGG | + | chr7.2:90351345-90351364 | MS.gene76949:CDS | 40.0% | |
| AATACATAGCAGCCAACACA+AGG | - | chr7.2:90351013-90351032 | None:intergenic | 40.0% | |
| AATACTCACCTGTCATAACC+CGG | + | chr7.2:90352460-90352479 | MS.gene76949:intron | 40.0% | |
| ACTAGTGTCTGTATGACCAA+AGG | - | chr7.2:90349604-90349623 | None:intergenic | 40.0% | |
| AGGAACTAACCACATACAGA+AGG | + | chr7.2:90350546-90350565 | MS.gene76949:intron | 40.0% | |
| AGGCACCAAGGACATTTATT+TGG | - | chr7.2:90352368-90352387 | None:intergenic | 40.0% | |
| AGTTAACTGATCATTGGAGG+AGG | + | chr7.2:90351132-90351151 | MS.gene76949:CDS | 40.0% | |
| AGTTGAACCAGGATTGAACT+AGG | + | chr7.2:90349797-90349816 | MS.gene76949:intron | 40.0% | |
| ATCCTGGTTCAACTAGAGTA+AGG | - | chr7.2:90349791-90349810 | None:intergenic | 40.0% | |
| ATTGAACCGAACTAGGAAGT+AGG | + | chr7.2:90349727-90349746 | MS.gene76949:intron | 40.0% | |
| CTAGATCTGAGGGAATTCAA+AGG | + | chr7.2:90351318-90351337 | MS.gene76949:CDS | 40.0% | |
| CTGGAAGGTAAGTAAAGTAC+GGG | + | chr7.2:90350352-90350371 | MS.gene76949:intron | 40.0% | |
| CTTTGAATTCCCTCAGATCT+AGG | - | chr7.2:90351320-90351339 | None:intergenic | 40.0% | |
| GAACTAGGTTTAACCATGGT+TGG | + | chr7.2:90349812-90349831 | MS.gene76949:intron | 40.0% | |
| GCAACTCAATCGAACATAGT+TGG | + | chr7.2:90351963-90351982 | MS.gene76949:CDS | 40.0% | |
| GCTGGAAGGTAAGTAAAGTA+CGG | + | chr7.2:90350351-90350370 | MS.gene76949:intron | 40.0% | |
| GGCACCAAGGACATTTATTT+GGG | - | chr7.2:90352367-90352386 | None:intergenic | 40.0% | |
| GGTTAAACCTAGTTCAATCC+TGG | - | chr7.2:90349807-90349826 | None:intergenic | 40.0% | |
| GTCAAATAAAGGCTATAGCG+GGG | - | chr7.2:90352588-90352607 | None:intergenic | 40.0% | |
| GTCCAATTACTCTGCGTAAT+AGG | + | chr7.2:90352694-90352713 | MS.gene76949:intron | 40.0% | |
| TACCTTACTCTAGTTGAACC+AGG | + | chr7.2:90349786-90349805 | MS.gene76949:intron | 40.0% | |
| TCAAGTTTCAGAGTCTGACA+TGG | + | chr7.2:90352829-90352848 | MS.gene76949:CDS | 40.0% | |
| TCAGATTTAGCGAAACTACC+TGG | - | chr7.2:90352056-90352075 | None:intergenic | 40.0% | |
| TCATGAGAACCTATGAAGCA+CGG | - | chr7.2:90350943-90350962 | None:intergenic | 40.0% | |
| TGAAAAAACTGGCCCAGAAT+TGG | + | chr7.2:90349335-90349354 | MS.gene76949:CDS | 40.0% | |
| TGGAAGGTAAGTAAAGTACG+GGG | + | chr7.2:90350353-90350372 | MS.gene76949:intron | 40.0% | |
| TGTACCCATTTGTCGTAGAA+TGG | + | chr7.2:90352663-90352682 | MS.gene76949:intron | 40.0% | |
| TGTGTCTTGGTTGTTGAACA+TGG | - | chr7.2:90352875-90352894 | None:intergenic | 40.0% | |
| TTGCACATTCCTTCTGTATG+TGG | - | chr7.2:90350558-90350577 | None:intergenic | 40.0% | |
| TTGTAGAGATGAGGAGAATG+TGG | + | chr7.2:90349491-90349510 | MS.gene76949:CDS | 40.0% | |
| TTGTGGTGCAAACTAGACTT+AGG | + | chr7.2:90349967-90349986 | MS.gene76949:intron | 40.0% | |
| TTTCAGCCAGGATTCAAACT+CGG | + | chr7.2:90350384-90350403 | MS.gene76949:intron | 40.0% | |
| ! | CATTTAGAGCGCCACATTAT+AGG | - | chr7.2:90351167-90351186 | None:intergenic | 40.0% |
| ! | CCTTTATTTGACAACACCAC+TGG | + | chr7.2:90352596-90352615 | MS.gene76949:intron | 40.0% |
| ! | CTATAATGTGGCGCTCTAAA+TGG | + | chr7.2:90351165-90351184 | MS.gene76949:CDS | 40.0% |
| ! | CTCTTAAGTGTTGTCAACTG+CGG | + | chr7.2:90352511-90352530 | MS.gene76949:intron | 40.0% |
| ! | CTGCTCTTCAACTGATTCAT+TGG | - | chr7.2:90352792-90352811 | None:intergenic | 40.0% |
| ! | GAAAGGGGTCTTTGATAATC+TGG | + | chr7.2:90350322-90350341 | MS.gene76949:intron | 40.0% |
| !! | AATAAATGTCCTTGGTGCCT+TGG | + | chr7.2:90352368-90352387 | MS.gene76949:intron | 40.0% |
| !! | AGGTTTTCATGATGATGTCG+TGG | + | chr7.2:90351555-90351574 | MS.gene76949:CDS | 40.0% |
| !! | CCAGTGGTGTTGTCAAATAA+AGG | - | chr7.2:90352599-90352618 | None:intergenic | 40.0% |
| !! | GGTAAAGAAATTCTGGTTCC+AGG | + | chr7.2:90352035-90352054 | MS.gene76949:CDS | 40.0% |
| !! | GGTTTTCATGATGATGTCGT+GGG | + | chr7.2:90351556-90351575 | MS.gene76949:CDS | 40.0% |
| !! | GTCTTAACTCTCTGGTTCTT+AGG | + | chr7.2:90350299-90350318 | MS.gene76949:intron | 40.0% |
| !! | TTTGCTGGTTGATTTGAGCT+CGG | + | chr7.2:90349760-90349779 | MS.gene76949:intron | 40.0% |
| AAATCAACCAGCAAACTGCC+CGG | - | chr7.2:90349755-90349774 | None:intergenic | 45.0% | |
| AACCTCAAACTGGGTCCTAT+TGG | - | chr7.2:90352156-90352175 | None:intergenic | 45.0% | |
| ACCAATTGAAGCATGACTCC+GGG | + | chr7.2:90349894-90349913 | MS.gene76949:intron | 45.0% | |
| AGAATACAGATACCATGGCC+GGG | - | chr7.2:90352481-90352500 | None:intergenic | 45.0% | |
| ATATCGAATCGATGAGACCC+CGG | - | chr7.2:90349915-90349934 | None:intergenic | 45.0% | |
| ATTTCCCTAGGAACACAAGG+AGG | + | chr7.2:90352894-90352913 | MS.gene76949:CDS | 45.0% | |
| CAACCAAGACACATTTCCCT+AGG | + | chr7.2:90352882-90352901 | MS.gene76949:CDS | 45.0% | |
| CAAGTCAGTACCTAGATCTG+AGG | + | chr7.2:90351307-90351326 | MS.gene76949:CDS | 45.0% | |
| CACATTTCCCTAGGAACACA+AGG | + | chr7.2:90352891-90352910 | MS.gene76949:CDS | 45.0% | |
| CTATTGGCAGACTCAACTGA+AGG | - | chr7.2:90352140-90352159 | None:intergenic | 45.0% | |
| CTTCAGTTGAGTCTGCCAAT+AGG | + | chr7.2:90352138-90352157 | MS.gene76949:CDS | 45.0% | |
| GCAGGACACACCTAAAACTA+AGG | - | chr7.2:90350630-90350649 | None:intergenic | 45.0% | |
| GGAGAAAGCCACTTCTATTG+AGG | + | chr7.2:90349682-90349701 | MS.gene76949:CDS | 45.0% | |
| GGGCTATAACATTGTGGTGT+AGG | - | chr7.2:90352568-90352587 | None:intergenic | 45.0% | |
| GGGTGTGGAAGATAATTGTG+TGG | + | chr7.2:90349545-90349564 | MS.gene76949:CDS | 45.0% | |
| GTCGTTGTCTTGTAGAGATG+AGG | + | chr7.2:90349482-90349501 | MS.gene76949:CDS | 45.0% | |
| GTTCCTAGGGAAATGTGTCT+TGG | - | chr7.2:90352888-90352907 | None:intergenic | 45.0% | |
| GTTGCAGAACAGAACTTTCC+AGG | - | chr7.2:90351948-90351967 | None:intergenic | 45.0% | |
| TTACCCTCCTTGTGTTCCTA+GGG | - | chr7.2:90352901-90352920 | None:intergenic | 45.0% | |
| TTATTTCACACCGGCACGTT+CGG | + | chr7.2:90350724-90350743 | MS.gene76949:intron | 45.0% | |
| TTCAGCCAGGATTCAAACTC+GGG | + | chr7.2:90350385-90350404 | MS.gene76949:intron | 45.0% | |
| TTCTCCCTGAACCTCAAACT+GGG | - | chr7.2:90352165-90352184 | None:intergenic | 45.0% | |
| TTTCCCTAGGAACACAAGGA+GGG | + | chr7.2:90352895-90352914 | MS.gene76949:CDS | 45.0% | |
| TTTCTCCCTGAACCTCAAAC+TGG | - | chr7.2:90352166-90352185 | None:intergenic | 45.0% | |
| ! | AATCATTCACCAAGGCACCA+AGG | - | chr7.2:90352380-90352399 | None:intergenic | 45.0% |
| ! | ATAGCGGGGCTATAACATTG+TGG | - | chr7.2:90352574-90352593 | None:intergenic | 45.0% |
| ! | ATGATGATGTCGTGGGTAAG+TGG | + | chr7.2:90351563-90351582 | MS.gene76949:intron | 45.0% |
| ! | TTCTGCATTCGGTGATTCTG+AGG | + | chr7.2:90349629-90349648 | MS.gene76949:CDS | 45.0% |
| ! | TTGATAATCTGGAGTTCGGC+TGG | + | chr7.2:90350333-90350352 | MS.gene76949:intron | 45.0% |
| !! | ACTCTCTGGTTCTTAGGGAA+AGG | + | chr7.2:90350305-90350324 | MS.gene76949:intron | 45.0% |
| !! | CTCTCTGGTTCTTAGGGAAA+GGG | + | chr7.2:90350306-90350325 | MS.gene76949:intron | 45.0% |
| !! | GAATTCTGGTTTCAAGGGTG+TGG | + | chr7.2:90349530-90349549 | MS.gene76949:CDS | 45.0% |
| !! | TCTCTGGTTCTTAGGGAAAG+GGG | + | chr7.2:90350307-90350326 | MS.gene76949:intron | 45.0% |
| AGGAGGGTAAGGAGGAAGTT+TGG | + | chr7.2:90352911-90352930 | MS.gene76949:CDS | 50.0% | |
| CCAATTGAAGCATGACTCCG+GGG | + | chr7.2:90349895-90349914 | MS.gene76949:intron | 50.0% | |
| CCTCTAGCGATCTGACTATC+AGG | - | chr7.2:90350052-90350071 | None:intergenic | 50.0% | |
| CCTGATAGTCAGATCGCTAG+AGG | + | chr7.2:90350049-90350068 | MS.gene76949:intron | 50.0% | |
| CTAGGAACACAAGGAGGGTA+AGG | + | chr7.2:90352900-90352919 | MS.gene76949:CDS | 50.0% | |
| CTTACCCTCCTTGTGTTCCT+AGG | - | chr7.2:90352902-90352921 | None:intergenic | 50.0% | |
| TATTTCACACCGGCACGTTC+GGG | + | chr7.2:90350725-90350744 | MS.gene76949:intron | 50.0% | |
| TCTACCCTATCCCACTAGCT+GGG | - | chr7.2:90350196-90350215 | None:intergenic | 50.0% | |
| TGCCAATAGGACCCAGTTTG+AGG | + | chr7.2:90352151-90352170 | MS.gene76949:CDS | 50.0% | |
| TGTCTGTGTCCGTGCTTCAT+AGG | + | chr7.2:90350931-90350950 | MS.gene76949:intron | 50.0% | |
| TGTGTCCTGCGCACATGTTT+CGG | + | chr7.2:90350640-90350659 | MS.gene76949:intron | 50.0% | |
| TTCTACCCTATCCCACTAGC+TGG | - | chr7.2:90350197-90350216 | None:intergenic | 50.0% | |
| ! | AGGACCCAGTTTGAGGTTCA+GGG | + | chr7.2:90352158-90352177 | MS.gene76949:CDS | 50.0% |
| ! | CAAAACCAAGAGCACGATGC+AGG | - | chr7.2:90352251-90352270 | None:intergenic | 50.0% |
| ! | TAATCTGGAGTTCGGCTGGA+AGG | + | chr7.2:90350337-90350356 | MS.gene76949:intron | 50.0% |
| ! | TAGGACCCAGTTTGAGGTTC+AGG | + | chr7.2:90352157-90352176 | MS.gene76949:CDS | 50.0% |
| ! | TGCATTCGGTGATTCTGAGG+AGG | + | chr7.2:90349632-90349651 | MS.gene76949:CDS | 50.0% |
| AAACCCTACCCCACTAGGTG+GGG | - | chr7.2:90350251-90350270 | None:intergenic | 55.0% | |
| AGTCAGATCGCTAGAGGCAG+AGG | + | chr7.2:90350055-90350074 | MS.gene76949:intron | 55.0% | |
| AGTGTCCGAAACATGTGCGC+AGG | - | chr7.2:90350648-90350667 | None:intergenic | 55.0% | |
| ATGTAGCCAACCCCAGCTAG+TGG | + | chr7.2:90350182-90350201 | MS.gene76949:intron | 55.0% | |
| CAAACCCTACCCCACTAGGT+GGG | - | chr7.2:90350252-90350271 | None:intergenic | 55.0% | |
| CAACCAAACCCTACCCCACT+AGG | - | chr7.2:90350256-90350275 | None:intergenic | 55.0% | |
| CAACCCCAGCTAGTGGGATA+GGG | + | chr7.2:90350189-90350208 | MS.gene76949:intron | 55.0% | |
| CATTGCCTGCATCGTGCTCT+TGG | + | chr7.2:90352243-90352262 | MS.gene76949:intron | 55.0% | |
| CCCCGGAGTCATGCTTCAAT+TGG | - | chr7.2:90349898-90349917 | None:intergenic | 55.0% | |
| CCGAACTAGGAAGTAGGAGC+CGG | + | chr7.2:90349733-90349752 | MS.gene76949:intron | 55.0% | |
| CCGGCTCCTACTTCCTAGTT+CGG | - | chr7.2:90349736-90349755 | None:intergenic | 55.0% | |
| CGAACTAGGAAGTAGGAGCC+GGG | + | chr7.2:90349734-90349753 | MS.gene76949:intron | 55.0% | |
| CTACCCTATCCCACTAGCTG+GGG | - | chr7.2:90350195-90350214 | None:intergenic | 55.0% | |
| CTACGGGACCATCATGAGCT+TGG | - | chr7.2:90351534-90351553 | None:intergenic | 55.0% | |
| CTGAGGAGGTTGAATCGCAG+CGG | + | chr7.2:90349646-90349665 | MS.gene76949:CDS | 55.0% | |
| GAACAAAGTCCCGAACGTGC+CGG | - | chr7.2:90350737-90350756 | None:intergenic | 55.0% | |
| GCACGTTCGGGACTTTGTTC+CGG | + | chr7.2:90350737-90350756 | MS.gene76949:intron | 55.0% | |
| GCTCATGATGGTCCCGTAGA+AGG | + | chr7.2:90351535-90351554 | MS.gene76949:CDS | 55.0% | |
| GGAACACAAGGAGGGTAAGG+AGG | + | chr7.2:90352903-90352922 | MS.gene76949:CDS | 55.0% | |
| GGGGAGAGATTGTTTCAGCC+AGG | + | chr7.2:90350372-90350391 | MS.gene76949:intron | 55.0% | |
| TACCATGGCCGGGTTATGAC+AGG | - | chr7.2:90352471-90352490 | None:intergenic | 55.0% | |
| TGTAGCCAACCCCAGCTAGT+GGG | + | chr7.2:90350183-90350202 | MS.gene76949:intron | 55.0% | |
| ! | CAAGAGCACGATGCAGGCAA+TGG | - | chr7.2:90352245-90352264 | None:intergenic | 55.0% |
| ! | TGAATCGCAGCGGAGGCATA+AGG | + | chr7.2:90349656-90349675 | MS.gene76949:CDS | 55.0% |
| AGGAGGTTGAATCGCAGCGG+AGG | + | chr7.2:90349649-90349668 | MS.gene76949:CDS | 60.0% | |
| ATGTAGCCGACCCCACCTAG+TGG | + | chr7.2:90350238-90350257 | MS.gene76949:intron | 60.0% | |
| CACCTGTCATAACCCGGCCA+TGG | + | chr7.2:90352466-90352485 | MS.gene76949:intron | 60.0% | |
| CCAAACCCTACCCCACTAGG+TGG | - | chr7.2:90350253-90350272 | None:intergenic | 60.0% | |
| CCAACCCCAGCTAGTGGGAT+AGG | + | chr7.2:90350188-90350207 | MS.gene76949:intron | 60.0% | |
| CCACCTAGTGGGGTAGGGTT+TGG | + | chr7.2:90350250-90350269 | MS.gene76949:intron | 60.0% | |
| CCTATCCCACTAGCTGGGGT+TGG | - | chr7.2:90350191-90350210 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCACCTAGT+GGG | + | chr7.2:90350239-90350258 | MS.gene76949:intron | 60.0% | |
| CCTACCCCACTAGGTGGGGT+CGG | - | chr7.2:90350247-90350266 | None:intergenic | 65.0% | |
| CGACCCCACCTAGTGGGGTA+GGG | + | chr7.2:90350245-90350264 | MS.gene76949:intron | 65.0% | |
| GTAGCCGACCCCACCTAGTG+GGG | + | chr7.2:90350240-90350259 | MS.gene76949:intron | 65.0% | |
| GTAGGAGCCGGGCAGTTTGC+TGG | + | chr7.2:90349745-90349764 | MS.gene76949:intron | 65.0% | |
| ! | CGCAGCGGAGGCATAAGGTG+TGG | + | chr7.2:90349661-90349680 | MS.gene76949:CDS | 65.0% |
| CCGACCCCACCTAGTGGGGT+AGG | + | chr7.2:90350244-90350263 | MS.gene76949:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 90349330 | 90352940 | 90349330 | ID=MS.gene76949 |
| chr7.2 | mRNA | 90349330 | 90352940 | 90349330 | ID=MS.gene76949.t1;Parent=MS.gene76949 |
| chr7.2 | exon | 90349330 | 90349703 | 90349330 | ID=MS.gene76949.t1.exon1;Parent=MS.gene76949.t1 |
| chr7.2 | CDS | 90349330 | 90349703 | 90349330 | ID=cds.MS.gene76949.t1;Parent=MS.gene76949.t1 |
| chr7.2 | exon | 90351124 | 90351431 | 90351124 | ID=MS.gene76949.t1.exon2;Parent=MS.gene76949.t1 |
| chr7.2 | CDS | 90351124 | 90351431 | 90351124 | ID=cds.MS.gene76949.t1;Parent=MS.gene76949.t1 |
| chr7.2 | exon | 90351521 | 90351577 | 90351521 | ID=MS.gene76949.t1.exon3;Parent=MS.gene76949.t1 |
| chr7.2 | CDS | 90351521 | 90351577 | 90351521 | ID=cds.MS.gene76949.t1;Parent=MS.gene76949.t1 |
| chr7.2 | exon | 90351778 | 90352187 | 90351778 | ID=MS.gene76949.t1.exon4;Parent=MS.gene76949.t1 |
| chr7.2 | CDS | 90351778 | 90352187 | 90351778 | ID=cds.MS.gene76949.t1;Parent=MS.gene76949.t1 |
| chr7.2 | exon | 90352776 | 90352940 | 90352776 | ID=MS.gene76949.t1.exon5;Parent=MS.gene76949.t1 |
| chr7.2 | CDS | 90352776 | 90352940 | 90352776 | ID=cds.MS.gene76949.t1;Parent=MS.gene76949.t1 |
| Gene Sequence |
| Protein sequence |
