Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80919.t1 | RHN44099.1 | 90.1 | 444 | 41 | 2 | 1 | 443 | 3 | 444 | 9.90E-214 | 752.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80919.t1 | A0A396GSG1 | 90.1 | 444 | 41 | 2 | 1 | 443 | 3 | 444 | 7.1e-214 | 752.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene80919 | 0.819249 | 1.28E-52 | -1.69E-46 |
| MS.gene049230 | MS.gene80919 | 0.853467 | 2.34E-61 | -1.69E-46 |
| MS.gene049378 | MS.gene80919 | 0.83841 | 2.92E-57 | -1.69E-46 |
| MS.gene049647 | MS.gene80919 | 0.801334 | 9.46E-49 | -1.69E-46 |
| MS.gene049801 | MS.gene80919 | 0.81352 | 2.46E-51 | -1.69E-46 |
| MS.gene04984 | MS.gene80919 | 0.816485 | 5.40E-52 | -1.69E-46 |
| MS.gene050105 | MS.gene80919 | 0.826469 | 2.67E-54 | -1.69E-46 |
| MS.gene050226 | MS.gene80919 | 0.813587 | 2.37E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene80919 | 0.805997 | 1.02E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene80919 | 0.812649 | 3.81E-51 | -1.69E-46 |
| MS.gene050605 | MS.gene80919 | 0.831103 | 2.02E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene80919 | -0.805464 | 1.32E-49 | -1.69E-46 |
| MS.gene050680 | MS.gene80919 | 0.804375 | 2.23E-49 | -1.69E-46 |
| MS.gene050724 | MS.gene80919 | 0.803047 | 4.20E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene80919 | 0.800581 | 1.35E-48 | -1.69E-46 |
| MS.gene050953 | MS.gene80919 | 0.821206 | 4.57E-53 | -1.69E-46 |
| MS.gene051210 | MS.gene80919 | 0.822448 | 2.36E-53 | -1.69E-46 |
| MS.gene051368 | MS.gene80919 | 0.8264 | 2.77E-54 | -1.69E-46 |
| MS.gene051452 | MS.gene80919 | 0.810288 | 1.24E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene80919 | 0.812462 | 4.19E-51 | -1.69E-46 |
| MS.gene051983 | MS.gene80919 | 0.806139 | 9.51E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene80919 | 0.802493 | 5.47E-49 | -1.69E-46 |
| MS.gene052426 | MS.gene80919 | 0.819943 | 8.90E-53 | -1.69E-46 |
| MS.gene052500 | MS.gene80919 | 0.802268 | 6.08E-49 | -1.69E-46 |
| MS.gene052502 | MS.gene80919 | 0.802691 | 4.98E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene80919 | 0.822404 | 2.41E-53 | -1.69E-46 |
| MS.gene052675 | MS.gene80919 | 0.817923 | 2.56E-52 | -1.69E-46 |
| MS.gene052677 | MS.gene80919 | 0.821995 | 3.00E-53 | -1.69E-46 |
| MS.gene052954 | MS.gene80919 | 0.830568 | 2.73E-55 | -1.69E-46 |
| MS.gene053166 | MS.gene80919 | 0.803023 | 4.25E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene80919 | 0.815426 | 9.30E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene80919 | 0.801461 | 8.91E-49 | -1.69E-46 |
| MS.gene054379 | MS.gene80919 | 0.815917 | 7.23E-52 | -1.69E-46 |
| MS.gene054405 | MS.gene80919 | 0.80984 | 1.55E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene80919 | 0.823788 | 1.15E-53 | -1.69E-46 |
| MS.gene054657 | MS.gene80919 | 0.806019 | 1.01E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene80919 | 0.805733 | 1.16E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene80919 | 0.800571 | 1.35E-48 | -1.69E-46 |
| MS.gene05510 | MS.gene80919 | 0.844196 | 8.78E-59 | -1.69E-46 |
| MS.gene055623 | MS.gene80919 | 0.812712 | 3.69E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene80919 | 0.857045 | 2.13E-62 | -1.69E-46 |
| MS.gene056480 | MS.gene80919 | 0.815982 | 6.99E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene80919 | 0.81966 | 1.03E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene80919 | 0.806786 | 6.95E-50 | -1.69E-46 |
| MS.gene058146 | MS.gene80919 | 0.838018 | 3.69E-57 | -1.69E-46 |
| MS.gene058223 | MS.gene80919 | -0.83505 | 2.10E-56 | -1.69E-46 |
| MS.gene058435 | MS.gene80919 | 0.822318 | 2.53E-53 | -1.69E-46 |
| MS.gene058548 | MS.gene80919 | 0.809853 | 1.54E-50 | -1.69E-46 |
| MS.gene058595 | MS.gene80919 | 0.840097 | 1.07E-57 | -1.69E-46 |
| MS.gene058979 | MS.gene80919 | 0.814056 | 1.87E-51 | -1.69E-46 |
| MS.gene059161 | MS.gene80919 | 0.812113 | 4.99E-51 | -1.69E-46 |
| MS.gene05979 | MS.gene80919 | 0.800013 | 1.76E-48 | -1.69E-46 |
| MS.gene060011 | MS.gene80919 | 0.810197 | 1.30E-50 | -1.69E-46 |
| MS.gene060084 | MS.gene80919 | 0.804228 | 2.39E-49 | -1.69E-46 |
| MS.gene060296 | MS.gene80919 | 0.815914 | 7.24E-52 | -1.69E-46 |
| MS.gene060297 | MS.gene80919 | 0.806525 | 7.88E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene80919 | 0.818669 | 1.74E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene80919 | 0.809272 | 2.05E-50 | -1.69E-46 |
| MS.gene060572 | MS.gene80919 | 0.80504 | 1.62E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene80919 | 0.80384 | 2.88E-49 | -1.69E-46 |
| MS.gene060802 | MS.gene80919 | 0.806778 | 6.97E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene80919 | 0.802007 | 6.88E-49 | -1.69E-46 |
| MS.gene060879 | MS.gene80919 | 0.805801 | 1.12E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene80919 | 0.814581 | 1.43E-51 | -1.69E-46 |
| MS.gene060942 | MS.gene80919 | 0.814861 | 1.24E-51 | -1.69E-46 |
| MS.gene060998 | MS.gene80919 | 0.83877 | 2.36E-57 | -1.69E-46 |
| MS.gene061002 | MS.gene80919 | 0.818454 | 1.94E-52 | -1.69E-46 |
| MS.gene06121 | MS.gene80919 | 0.800335 | 1.51E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80919.t1 | MTR_7g007590 | 84.009 | 444 | 43 | 4 | 1 | 443 | 1 | 417 | 0.0 | 725 |
| MS.gene80919.t1 | MTR_8g047200 | 73.171 | 287 | 39 | 5 | 141 | 410 | 1 | 266 | 1.53e-135 | 390 |
| MS.gene80919.t1 | MTR_8g006760 | 41.846 | 325 | 160 | 11 | 34 | 333 | 20 | 340 | 2.03e-62 | 207 |
| MS.gene80919.t1 | MTR_4g087360 | 32.281 | 285 | 168 | 9 | 48 | 315 | 14 | 290 | 1.74e-25 | 108 |
| MS.gene80919.t1 | MTR_6g066120 | 81.356 | 59 | 11 | 0 | 384 | 442 | 4 | 62 | 1.93e-25 | 99.8 |
| MS.gene80919.t1 | MTR_4g087360 | 32.281 | 285 | 168 | 9 | 48 | 315 | 42 | 318 | 3.18e-25 | 108 |
| MS.gene80919.t1 | MTR_7g407120 | 63.750 | 80 | 11 | 1 | 260 | 339 | 1 | 62 | 1.11e-24 | 102 |
| MS.gene80919.t1 | MTR_4g087350 | 32.961 | 179 | 112 | 4 | 125 | 299 | 85 | 259 | 1.01e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80919.t1 | AT4G37440 | 35.154 | 293 | 159 | 10 | 49 | 334 | 72 | 340 | 1.51e-36 | 140 |
| MS.gene80919.t1 | AT4G37440 | 35.154 | 293 | 159 | 10 | 49 | 334 | 72 | 340 | 1.56e-36 | 139 |
| MS.gene80919.t1 | AT4G37440 | 35.154 | 293 | 159 | 10 | 49 | 334 | 72 | 340 | 1.59e-36 | 139 |
| MS.gene80919.t1 | AT3G59670 | 33.080 | 263 | 150 | 10 | 124 | 372 | 130 | 380 | 3.32e-28 | 117 |
| MS.gene80919.t1 | AT3G50040 | 50.000 | 110 | 54 | 1 | 122 | 230 | 104 | 213 | 2.45e-24 | 105 |
| MS.gene80919.t1 | AT3G50040 | 50.000 | 110 | 54 | 1 | 122 | 230 | 104 | 213 | 2.45e-24 | 105 |
| MS.gene80919.t1 | AT3G50040 | 50.000 | 110 | 54 | 1 | 122 | 230 | 104 | 213 | 2.45e-24 | 105 |
| MS.gene80919.t1 | AT3G50040 | 50.000 | 110 | 54 | 1 | 122 | 230 | 104 | 213 | 2.98e-24 | 103 |
Find 79 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTGTCACGTTCCAATTC+TGG | 0.163205 | 7.3:-89901195 | None:intergenic |
| GTTAATATAATTGGGAATTC+TGG | 0.232894 | 7.3:+89901363 | MS.gene80919:CDS |
| CATTTAGAGCGCCACATTAT+AGG | 0.242366 | 7.3:-89903051 | None:intergenic |
| CTATAATGTGGCGCTCTAAA+TGG | 0.246676 | 7.3:+89903052 | MS.gene80919:CDS |
| AATGTGGAAGTTAATATAAT+TGG | 0.249082 | 7.3:+89901354 | MS.gene80919:CDS |
| TAGGACCCAGTTTGAGGTTC+AGG | 0.293038 | 7.3:+89904044 | MS.gene80919:CDS |
| AAGTTTGCAGTAGACGATTT+TGG | 0.304395 | 7.3:+89903168 | MS.gene80919:CDS |
| AGTTCAAGTTCTAGTTCTTT+TGG | 0.310205 | 7.3:+89901432 | MS.gene80919:CDS |
| TTTCTCCCTGAACCTCAAAC+TGG | 0.332711 | 7.3:-89904050 | None:intergenic |
| TTGCTCTTCAACTGATTCAT+TGG | 0.334113 | 7.3:-89904639 | None:intergenic |
| CTTACCCTCCTTGTGTTCCT+AGG | 0.334663 | 7.3:-89904767 | None:intergenic |
| AACATAGTTGGGCCATCTAA+TGG | 0.350082 | 7.3:+89903862 | MS.gene80919:CDS |
| CTTTGAATTCCCTCAGATCT+AGG | 0.356218 | 7.3:-89903204 | None:intergenic |
| AACCTCAAACTGGGTCCTAT+TGG | 0.372953 | 7.3:-89904040 | None:intergenic |
| GTTGCAGAACAGAACTTTCC+AGG | 0.381277 | 7.3:-89903832 | None:intergenic |
| TGGAACCAGAATTTCTTTAC+CGG | 0.385709 | 7.3:-89903920 | None:intergenic |
| AATTGGGAATTCTGGTTTCA+AGG | 0.405012 | 7.3:+89901371 | MS.gene80919:CDS |
| GCTCATGATGGTCCCGTAGA+AGG | 0.405262 | 7.3:+89903422 | MS.gene80919:CDS |
| ATGTGGAAGTTAATATAATT+GGG | 0.418323 | 7.3:+89901355 | MS.gene80919:CDS |
| TCTTGTCACGTTCCAATTCT+GGG | 0.423238 | 7.3:-89901194 | None:intergenic |
| AGGAGGGTAAGGAGGAAGTT+TGG | 0.434590 | 7.3:+89904779 | MS.gene80919:CDS |
| GAACGATTAAATCCATTAGA+TGG | 0.440535 | 7.3:-89903874 | None:intergenic |
| GCAACTCAATCGAACATAGT+TGG | 0.450765 | 7.3:+89903850 | MS.gene80919:CDS |
| AAGGTAATGCTGATAATGTT+GGG | 0.452199 | 7.3:+89903662 | MS.gene80919:intron |
| GGTAAAGAAATTCTGGTTCC+AGG | 0.453139 | 7.3:+89903922 | MS.gene80919:CDS |
| ACTAGTTCTGATTCTGCATT+CGG | 0.464087 | 7.3:+89901465 | MS.gene80919:CDS |
| ATCATCATGAAAACCTTCTA+CGG | 0.468644 | 7.3:-89903435 | None:intergenic |
| GAAGAAGAAGAAGGTGACCT+TGG | 0.472632 | 7.3:+89901222 | MS.gene80919:CDS |
| CAACTCAATCGAACATAGTT+GGG | 0.478639 | 7.3:+89903851 | MS.gene80919:CDS |
| CTACGGGACCATCATGAGCT+TGG | 0.481763 | 7.3:-89903418 | None:intergenic |
| AGGACCCAGTTTGAGGTTCA+GGG | 0.482936 | 7.3:+89904045 | MS.gene80919:CDS |
| ATTGGGAATTCTGGTTTCAA+GGG | 0.485312 | 7.3:+89901372 | MS.gene80919:CDS |
| CTTCAGTTGAGTCTGCCAAT+AGG | 0.488684 | 7.3:+89904025 | MS.gene80919:CDS |
| TGAATCACAGCGGAGGCATA+AGG | 0.488826 | 7.3:+89901503 | MS.gene80919:CDS |
| TTACCCTCCTTGTGTTCCTA+GGG | 0.489585 | 7.3:-89904766 | None:intergenic |
| TGCCAATAGGACCCAGTTTG+AGG | 0.495444 | 7.3:+89904038 | MS.gene80919:CDS |
| GAAGGTAATGCTGATAATGT+TGG | 0.499295 | 7.3:+89903661 | MS.gene80919:intron |
| AGATCAAGTTAAACGATATG+TGG | 0.513455 | 7.3:+89903686 | MS.gene80919:CDS |
| CTAGGAACACAAGGAGGGTA+AGG | 0.514099 | 7.3:+89904768 | MS.gene80919:CDS |
| AAGTAATGTGGAGAAAGAAC+AGG | 0.518229 | 7.3:+89903232 | MS.gene80919:CDS |
| TTGTAGAGATGAGGAGAATG+TGG | 0.520186 | 7.3:+89901338 | MS.gene80919:CDS |
| AAGATAGTAGAAGAAGAAGA+AGG | 0.527027 | 7.3:+89901213 | MS.gene80919:CDS |
| TTCTCCCTGAACCTCAAACT+GGG | 0.539592 | 7.3:-89904049 | None:intergenic |
| AAAAGTTAACTGATCATTGG+AGG | 0.545239 | 7.3:+89903016 | MS.gene80919:CDS |
| AAGTTGAGAATTTGAAAACT+CGG | 0.545310 | 7.3:+89903785 | MS.gene80919:CDS |
| GTTCCTAGGGAAATGAGTCT+TGG | 0.546241 | 7.3:-89904753 | None:intergenic |
| GAATTCTGGTTTCAAGGGCG+TGG | 0.552947 | 7.3:+89901377 | MS.gene80919:CDS |
| TCAGATGTAGCGAAACTACC+TGG | 0.555470 | 7.3:-89903940 | None:intergenic |
| ACCGTGAAATATGAAAATCC+TGG | 0.561681 | 7.3:+89903814 | MS.gene80919:CDS |
| CTCATTTCCCTAGGAACACA+AGG | 0.573519 | 7.3:+89904759 | MS.gene80919:CDS |
| AATGCATTATCAACTCGAGA+AGG | 0.574177 | 7.3:+89903994 | MS.gene80919:CDS |
| TTCTGCATTCGGTGATTCAG+AGG | 0.574503 | 7.3:+89901476 | MS.gene80919:CDS |
| GTCGTTGTCTTGTAGAGATG+AGG | 0.574630 | 7.3:+89901329 | MS.gene80919:CDS |
| CAAGTCAGTACCTAGATCTG+AGG | 0.578521 | 7.3:+89903194 | MS.gene80919:CDS |
| TTCAAAGGACTAAAGTAATG+TGG | 0.579531 | 7.3:+89903220 | MS.gene80919:CDS |
| TCATCATGAAAACCTTCTAC+GGG | 0.586519 | 7.3:-89903434 | None:intergenic |
| GAAACATACCTCAATAGAAG+TGG | 0.586638 | 7.3:-89901537 | None:intergenic |
| TGCATTCGGTGATTCAGAGG+AGG | 0.589165 | 7.3:+89901479 | MS.gene80919:CDS |
| AGGTAATGCTGATAATGTTG+GGG | 0.590800 | 7.3:+89903663 | MS.gene80919:intron |
| CATCCAAGACTCATTTCCCT+AGG | 0.590843 | 7.3:+89904750 | MS.gene80919:CDS |
| GGAGAAAGCCACTTCTATTG+AGG | 0.591650 | 7.3:+89901529 | MS.gene80919:CDS |
| GATCAAGTTAAACGATATGT+GGG | 0.594999 | 7.3:+89903687 | MS.gene80919:CDS |
| GGAACACAAGGAGGGTAAGG+AGG | 0.597368 | 7.3:+89904771 | MS.gene80919:CDS |
| AGAACCAAAAGAACAAAATG+TGG | 0.603582 | 7.3:+89901293 | MS.gene80919:CDS |
| GAAATACGTAAAAGAGATTG+CGG | 0.605017 | 7.3:+89903113 | MS.gene80919:CDS |
| AAGTCAGTACCTAGATCTGA+GGG | 0.610939 | 7.3:+89903195 | MS.gene80919:CDS |
| AGTTAACTGATCATTGGAGG+AGG | 0.614517 | 7.3:+89903019 | MS.gene80919:CDS |
| CACAGCGGAGGCATAAGGTG+TGG | 0.616481 | 7.3:+89901508 | MS.gene80919:CDS |
| GGTACATCTTTCCTATAATG+TGG | 0.617709 | 7.3:+89903040 | MS.gene80919:CDS |
| ATGCATTATCAACTCGAGAA+GGG | 0.618272 | 7.3:+89903995 | MS.gene80919:CDS |
| TGAGTCTTGGATGTTGAACA+TGG | 0.629245 | 7.3:-89904740 | None:intergenic |
| CTATTGGCAGACTCAACTGA+AGG | 0.634161 | 7.3:-89904024 | None:intergenic |
| ATTTCCCTAGGAACACAAGG+AGG | 0.639278 | 7.3:+89904762 | MS.gene80919:CDS |
| CTAGATCTGAGGGAATTCAA+AGG | 0.647893 | 7.3:+89903205 | MS.gene80919:CDS |
| TTTCCCTAGGAACACAAGGA+GGG | 0.649586 | 7.3:+89904763 | MS.gene80919:CDS |
| AGGAGGTTGAATCACAGCGG+AGG | 0.673994 | 7.3:+89901496 | MS.gene80919:CDS |
| GGGCGTGGAAGATAATTGTG+TGG | 0.694963 | 7.3:+89901392 | MS.gene80919:CDS |
| TCATCTCTACAAGACAACGA+CGG | 0.716546 | 7.3:-89901327 | None:intergenic |
| CAGAGGAGGTTGAATCACAG+CGG | 0.758861 | 7.3:+89901493 | MS.gene80919:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAAAAACATTATATTA+TGG | - | chr7.3:89903481-89903500 | None:intergenic | 10.0% |
| !! | ATGAAAAAACATTATATTAT+GGG | - | chr7.3:89903480-89903499 | None:intergenic | 10.0% |
| !! | TGATAAAAAATTAATGTTAT+AGG | + | chr7.3:89902270-89902289 | MS.gene80919:intron | 10.0% |
| !!! | AATAAAAAGAACATTTTATT+TGG | - | chr7.3:89902562-89902581 | None:intergenic | 10.0% |
| !!! | TTTGTTTTACTTTTTAAATA+TGG | + | chr7.3:89901716-89901735 | MS.gene80919:intron | 10.0% |
| !! | ATCATATATAAGAGATAAAA+AGG | - | chr7.3:89902729-89902748 | None:intergenic | 15.0% |
| !! | AAAAACATTATATTATGGGA+TGG | - | chr7.3:89903476-89903495 | None:intergenic | 20.0% |
| !! | AATGTGGAAGTTAATATAAT+TGG | + | chr7.3:89901354-89901373 | MS.gene80919:CDS | 20.0% |
| !! | AGAAATGATTATAAAAGTTG+TGG | - | chr7.3:89904225-89904244 | None:intergenic | 20.0% |
| !! | AGCAAAATACATCATAAAAA+AGG | - | chr7.3:89902628-89902647 | None:intergenic | 20.0% |
| !! | ATATATAAGAGATAAAAAGG+AGG | - | chr7.3:89902726-89902745 | None:intergenic | 20.0% |
| !! | ATGTGGAAGTTAATATAATT+GGG | + | chr7.3:89901355-89901374 | MS.gene80919:CDS | 20.0% |
| !!! | AAAACAATTTTTTGACCTAT+AGG | + | chr7.3:89902336-89902355 | MS.gene80919:intron | 20.0% |
| !!! | AATTTTAAAATCATTCACCA+AGG | - | chr7.3:89904267-89904286 | None:intergenic | 20.0% |
| !!! | ATTATGAACATTTTTCAAAC+TGG | + | chr7.3:89903599-89903618 | MS.gene80919:intron | 20.0% |
| !!! | CAATCTTTTAAAAATCAAAC+TGG | - | chr7.3:89901787-89901806 | None:intergenic | 20.0% |
| !!! | CTTTCTTAATAGCTTTTTTA+TGG | - | chr7.3:89901945-89901964 | None:intergenic | 20.0% |
| !!! | TGTATTTTGCTTATTTTGTA+CGG | + | chr7.3:89902637-89902656 | MS.gene80919:intron | 20.0% |
| ! | AAGTTGAGAATTTGAAAACT+CGG | + | chr7.3:89903785-89903804 | MS.gene80919:CDS | 25.0% |
| ! | ACTCCAAACATTAAAAGTAA+AGG | - | chr7.3:89904474-89904493 | None:intergenic | 25.0% |
| ! | AGAAAAAGTTAACTGATCAT+TGG | + | chr7.3:89903013-89903032 | MS.gene80919:CDS | 25.0% |
| ! | ATTGAGAAACCTAACAAAAA+AGG | + | chr7.3:89902377-89902396 | MS.gene80919:intron | 25.0% |
| ! | GTTAATATAATTGGGAATTC+TGG | + | chr7.3:89901363-89901382 | MS.gene80919:CDS | 25.0% |
| ! | TACTATGGTATGAAATTACT+TGG | + | chr7.3:89903312-89903331 | MS.gene80919:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+CGG | + | chr7.3:89901995-89902014 | MS.gene80919:intron | 25.0% |
| ! | TTATTTCATGCTAACATGTT+CGG | + | chr7.3:89902577-89902596 | MS.gene80919:intron | 25.0% |
| ! | TTTGTTTCATTGATATGAGA+AGG | + | chr7.3:89903643-89903662 | MS.gene80919:intron | 25.0% |
| !! | ATTTTCAAATTACCTTGTGT+TGG | + | chr7.3:89902885-89902904 | MS.gene80919:intron | 25.0% |
| !! | ATTTTGAACAACTTTCTTCA+AGG | - | chr7.3:89904185-89904204 | None:intergenic | 25.0% |
| !! | CAATTCAATTCATCCATTTT+GGG | + | chr7.3:89902296-89902315 | MS.gene80919:intron | 25.0% |
| !! | CATTATTATCTTCTTTTCCA+AGG | - | chr7.3:89901242-89901261 | None:intergenic | 25.0% |
| !! | TCAATTCAATTCATCCATTT+TGG | + | chr7.3:89902295-89902314 | MS.gene80919:intron | 25.0% |
| !! | TTAACCACATTTTGTTCTTT+TGG | - | chr7.3:89901300-89901319 | None:intergenic | 25.0% |
| !! | TTTTTCATTCTACGACAAAT+GGG | - | chr7.3:89904520-89904539 | None:intergenic | 25.0% |
| !!! | AAAGATTGATGTTGTTTTTG+TGG | + | chr7.3:89901799-89901818 | MS.gene80919:intron | 25.0% |
| !!! | GCTGCTATGTATTTTTTATA+AGG | + | chr7.3:89902907-89902926 | MS.gene80919:intron | 25.0% |
| !!! | GTACCTTTACTTTTAATGTT+TGG | + | chr7.3:89904468-89904487 | MS.gene80919:intron | 25.0% |
| !!! | TGTTGTTAATGTTGTTTTTG+TGG | + | chr7.3:89902129-89902148 | MS.gene80919:intron | 25.0% |
| !!! | TTTCTCAGTCTTTTAGTTAT+TGG | + | chr7.3:89901556-89901575 | MS.gene80919:intron | 25.0% |
| AAAAGTTAACTGATCATTGG+AGG | + | chr7.3:89903016-89903035 | MS.gene80919:CDS | 30.0% | |
| AACAAAGAATACAGATACCA+TGG | - | chr7.3:89904335-89904354 | None:intergenic | 30.0% | |
| AAGATAGTAGAAGAAGAAGA+AGG | + | chr7.3:89901213-89901232 | MS.gene80919:CDS | 30.0% | |
| AATAAAAACCAAGCTCATGA+TGG | + | chr7.3:89903410-89903429 | MS.gene80919:CDS | 30.0% | |
| AATACGTTTAAACACTGACA+CGG | - | chr7.3:89902974-89902993 | None:intergenic | 30.0% | |
| AATCAAACTGGATATCGAAT+CGG | - | chr7.3:89901775-89901794 | None:intergenic | 30.0% | |
| ACGTTCAGATACTTTCATTT+AGG | + | chr7.3:89902533-89902552 | MS.gene80919:intron | 30.0% | |
| AGAACCAAAAGAACAAAATG+TGG | + | chr7.3:89901293-89901312 | MS.gene80919:CDS | 30.0% | |
| AGATCAAGTTAAACGATATG+TGG | + | chr7.3:89903686-89903705 | MS.gene80919:CDS | 30.0% | |
| AGATTTAGAGATCAATGAGT+TGG | + | chr7.3:89901963-89901982 | MS.gene80919:intron | 30.0% | |
| ATCATCATGAAAACCTTCTA+CGG | - | chr7.3:89903438-89903457 | None:intergenic | 30.0% | |
| ATTCACCAAGGACATTTATT+TGG | - | chr7.3:89904255-89904274 | None:intergenic | 30.0% | |
| CATAGTACGAGAAAAAACAA+TGG | - | chr7.3:89903299-89903318 | None:intergenic | 30.0% | |
| GAAATACGTAAAAGAGATTG+CGG | + | chr7.3:89903113-89903132 | MS.gene80919:CDS | 30.0% | |
| GAACGATTAAATCCATTAGA+TGG | - | chr7.3:89903877-89903896 | None:intergenic | 30.0% | |
| GATCAAGTTAAACGATATGT+GGG | + | chr7.3:89903687-89903706 | MS.gene80919:CDS | 30.0% | |
| GTTAAAGTGTGAATCAAACA+AGG | + | chr7.3:89903522-89903541 | MS.gene80919:intron | 30.0% | |
| TAATGTTATGATTCAGCTTG+AGG | + | chr7.3:89904610-89904629 | MS.gene80919:intron | 30.0% | |
| TTATCCCAAATAAATGTCCT+TGG | + | chr7.3:89904247-89904266 | MS.gene80919:intron | 30.0% | |
| TTCAAAGGACTAAAGTAATG+TGG | + | chr7.3:89903220-89903239 | MS.gene80919:CDS | 30.0% | |
| TTCACCAAGGACATTTATTT+GGG | - | chr7.3:89904254-89904273 | None:intergenic | 30.0% | |
| TTGAACTAGGTTTAACCATA+TGG | + | chr7.3:89901657-89901676 | MS.gene80919:intron | 30.0% | |
| TTGTCAAATAAAGGCTATAG+CGG | - | chr7.3:89904440-89904459 | None:intergenic | 30.0% | |
| ! | AAGGTAATGCTGATAATGTT+GGG | + | chr7.3:89903662-89903681 | MS.gene80919:intron | 30.0% |
| ! | ATTTTCAATCATGTCAACGA+AGG | - | chr7.3:89903746-89903765 | None:intergenic | 30.0% |
| ! | CAATGAGTTGGATCAAAATA+TGG | + | chr7.3:89901975-89901994 | MS.gene80919:intron | 30.0% |
| ! | GTTTTTCATTCTACGACAAA+TGG | - | chr7.3:89904521-89904540 | None:intergenic | 30.0% |
| ! | TCCAGGATTTTCATATTTCA+CGG | - | chr7.3:89903818-89903837 | None:intergenic | 30.0% |
| ! | TGTTTTATGCTTCTTCCTAT+AGG | - | chr7.3:89902322-89902341 | None:intergenic | 30.0% |
| !! | ATTAAAAGTAAAGGTACCAG+TGG | - | chr7.3:89904465-89904484 | None:intergenic | 30.0% |
| !! | GCATGAATATCCTTAGTTTT+AGG | + | chr7.3:89902468-89902487 | MS.gene80919:intron | 30.0% |
| !!! | AGCTTTTTTATGGTTTTTCC+AGG | - | chr7.3:89901935-89901954 | None:intergenic | 30.0% |
| !!! | AGTTCAAGTTCTAGTTCTTT+TGG | + | chr7.3:89901432-89901451 | MS.gene80919:CDS | 30.0% |
| !!! | CATTGTTTTTTCTCGTACTA+TGG | + | chr7.3:89903297-89903316 | MS.gene80919:CDS | 30.0% |
| !!! | TGGTTAGTTCCTTTTTTGTT+AGG | - | chr7.3:89902389-89902408 | None:intergenic | 30.0% |
| AAAGTTCCTACTTCCTAGTT+CGG | - | chr7.3:89901583-89901602 | None:intergenic | 35.0% | |
| AACAAGATGAACCAACCATA+TGG | - | chr7.3:89901675-89901694 | None:intergenic | 35.0% | |
| AAGTAATGTGGAGAAAGAAC+AGG | + | chr7.3:89903232-89903251 | MS.gene80919:CDS | 35.0% | |
| AATGCATTATCAACTCGAGA+AGG | + | chr7.3:89903994-89904013 | MS.gene80919:CDS | 35.0% | |
| ACCGTGAAATATGAAAATCC+TGG | + | chr7.3:89903814-89903833 | MS.gene80919:CDS | 35.0% | |
| ACTAGGTTTAACCATATGGT+TGG | + | chr7.3:89901661-89901680 | MS.gene80919:intron | 35.0% | |
| ACTATCAACGCAAAATACAC+TGG | - | chr7.3:89903360-89903379 | None:intergenic | 35.0% | |
| ATCCTATTACGCAGAGTAAT+TGG | - | chr7.3:89904549-89904568 | None:intergenic | 35.0% | |
| ATGCATTATCAACTCGAGAA+GGG | + | chr7.3:89903995-89904014 | MS.gene80919:CDS | 35.0% | |
| ATGTACATTCCTTCTGTATG+TGG | - | chr7.3:89902409-89902428 | None:intergenic | 35.0% | |
| CAACTCAATCGAACATAGTT+GGG | + | chr7.3:89903851-89903870 | MS.gene80919:CDS | 35.0% | |
| CATACAGAAGGAATGTACAT+TGG | + | chr7.3:89902409-89902428 | MS.gene80919:intron | 35.0% | |
| CTGGAAGGTAAGTAAAGTAT+GGG | + | chr7.3:89902204-89902223 | MS.gene80919:intron | 35.0% | |
| GAAACATACCTCAATAGAAG+TGG | - | chr7.3:89901540-89901559 | None:intergenic | 35.0% | |
| GGTACATCTTTCCTATAATG+TGG | + | chr7.3:89903040-89903059 | MS.gene80919:CDS | 35.0% | |
| GTCATGTAGATGTTCTTGTA+AGG | + | chr7.3:89901861-89901880 | MS.gene80919:intron | 35.0% | |
| TCATCATGAAAACCTTCTAC+GGG | - | chr7.3:89903437-89903456 | None:intergenic | 35.0% | |
| TCATGAGAATCTATGAAGCA+CGG | - | chr7.3:89902830-89902849 | None:intergenic | 35.0% | |
| TGGAACCAGAATTTCTTTAC+CGG | - | chr7.3:89903923-89903942 | None:intergenic | 35.0% | |
| TGTCAAATAAAGGCTATAGC+GGG | - | chr7.3:89904439-89904458 | None:intergenic | 35.0% | |
| TTTAGTTATTGGACCGAACT+AGG | + | chr7.3:89901567-89901586 | MS.gene80919:intron | 35.0% | |
| ! | AAGTTTGCAGTAGACGATTT+TGG | + | chr7.3:89903168-89903187 | MS.gene80919:CDS | 35.0% |
| ! | AGGTAATGCTGATAATGTTG+GGG | + | chr7.3:89903663-89903682 | MS.gene80919:intron | 35.0% |
| ! | CATAATTCTGCTTCTTTTGC+CGG | + | chr7.3:89903901-89903920 | MS.gene80919:CDS | 35.0% |
| ! | GAAGGTAATGCTGATAATGT+TGG | + | chr7.3:89903661-89903680 | MS.gene80919:intron | 35.0% |
| ! | GTCTTTGATAATCCGAAGTT+TGG | + | chr7.3:89902181-89902200 | MS.gene80919:intron | 35.0% |
| ! | GTTTTCTTGCTTCTTCCTAT+AGG | - | chr7.3:89902354-89902373 | None:intergenic | 35.0% |
| ! | TCTTAACTCTCTGGTTCATA+GGG | + | chr7.3:89902152-89902171 | MS.gene80919:intron | 35.0% |
| ! | TTGCTCTTCAACTGATTCAT+TGG | - | chr7.3:89904642-89904661 | None:intergenic | 35.0% |
| ! | TTTTGCCGGTAAAGAAATTC+TGG | + | chr7.3:89903915-89903934 | MS.gene80919:CDS | 35.0% |
| !! | AATTGGGAATTCTGGTTTCA+AGG | + | chr7.3:89901371-89901390 | MS.gene80919:CDS | 35.0% |
| !! | ACTAGTTCTGATTCTGCATT+CGG | + | chr7.3:89901465-89901484 | MS.gene80919:CDS | 35.0% |
| !! | ATTGGGAATTCTGGTTTCAA+GGG | + | chr7.3:89901372-89901391 | MS.gene80919:CDS | 35.0% |
| !! | TGAGCTTGGTTTTTATTCTC+TGG | - | chr7.3:89903407-89903426 | None:intergenic | 35.0% |
| !! | TTTTTGTGGTCTTAACTCTC+TGG | + | chr7.3:89902143-89902162 | MS.gene80919:intron | 35.0% |
| !!! | GATTGATGTTGTTTTTGTGG+TGG | + | chr7.3:89901802-89901821 | MS.gene80919:intron | 35.0% |
| AAAAACCCGAGTTTGAATCC+TGG | - | chr7.3:89902245-89902264 | None:intergenic | 40.0% | |
| AACATAGTTGGGCCATCTAA+TGG | + | chr7.3:89903862-89903881 | MS.gene80919:CDS | 40.0% | |
| AAGAATACAGATACCATGGC+CGG | - | chr7.3:89904331-89904350 | None:intergenic | 40.0% | |
| AAGTAAAGTATGGGCAGAGA+TGG | + | chr7.3:89902213-89902232 | MS.gene80919:intron | 40.0% | |
| AAGTCAGTACCTAGATCTGA+GGG | + | chr7.3:89903195-89903214 | MS.gene80919:CDS | 40.0% | |
| AATACATAGCAGCCAACACA+AGG | - | chr7.3:89902900-89902919 | None:intergenic | 40.0% | |
| AATACTCACCTGTCATAACC+CGG | + | chr7.3:89904309-89904328 | MS.gene80919:intron | 40.0% | |
| ACAGGACACACCTAAAACTA+AGG | - | chr7.3:89902481-89902500 | None:intergenic | 40.0% | |
| ACATGTTCGGTACATTGTTC+TGG | + | chr7.3:89902590-89902609 | MS.gene80919:intron | 40.0% | |
| AGGAACTAACCACATACAGA+AGG | + | chr7.3:89902397-89902416 | MS.gene80919:intron | 40.0% | |
| AGTTAACTGATCATTGGAGG+AGG | + | chr7.3:89903019-89903038 | MS.gene80919:CDS | 40.0% | |
| AGTTGAACCAGGATTGAACT+AGG | + | chr7.3:89901644-89901663 | MS.gene80919:intron | 40.0% | |
| ATCCTGGTTCAACTAGAGTA+AGG | - | chr7.3:89901638-89901657 | None:intergenic | 40.0% | |
| ATCTTGTCACGTTCCAATTC+TGG | - | chr7.3:89901198-89901217 | None:intergenic | 40.0% | |
| CGAAATGTAGAACACTGACA+CGG | - | chr7.3:89902779-89902798 | None:intergenic | 40.0% | |
| CGTGTCAGTGTTCTACATTT+CGG | + | chr7.3:89902777-89902796 | MS.gene80919:intron | 40.0% | |
| CTAGATCTGAGGGAATTCAA+AGG | + | chr7.3:89903205-89903224 | MS.gene80919:CDS | 40.0% | |
| CTTTGAATTCCCTCAGATCT+AGG | - | chr7.3:89903207-89903226 | None:intergenic | 40.0% | |
| GCAACTCAATCGAACATAGT+TGG | + | chr7.3:89903850-89903869 | MS.gene80919:CDS | 40.0% | |
| GCTGGAAGGTAAGTAAAGTA+TGG | + | chr7.3:89902203-89902222 | MS.gene80919:intron | 40.0% | |
| GGTTAAACCTAGTTCAATCC+TGG | - | chr7.3:89901654-89901673 | None:intergenic | 40.0% | |
| GTACATTGTTCTGGTGGAAA+GGG | + | chr7.3:89902599-89902618 | MS.gene80919:intron | 40.0% | |
| GTCAAATAAAGGCTATAGCG+GGG | - | chr7.3:89904438-89904457 | None:intergenic | 40.0% | |
| GTCCAATTACTCTGCGTAAT+AGG | + | chr7.3:89904544-89904563 | MS.gene80919:intron | 40.0% | |
| TACCTTACTCTAGTTGAACC+AGG | + | chr7.3:89901633-89901652 | MS.gene80919:intron | 40.0% | |
| TCATCTCTACAAGACAACGA+CGG | - | chr7.3:89901330-89901349 | None:intergenic | 40.0% | |
| TCTACCCTATCGCACTAATT+GGG | - | chr7.3:89902045-89902064 | None:intergenic | 40.0% | |
| TCTTGTCACGTTCCAATTCT+GGG | - | chr7.3:89901197-89901216 | None:intergenic | 40.0% | |
| TGAAAAAACTGGCCCAGAAT+TGG | + | chr7.3:89901182-89901201 | MS.gene80919:CDS | 40.0% | |
| TGAGTCTTGGATGTTGAACA+TGG | - | chr7.3:89904743-89904762 | None:intergenic | 40.0% | |
| TGCGATAGGGTAGAACATTA+AGG | + | chr7.3:89902051-89902070 | MS.gene80919:intron | 40.0% | |
| TGTAAGGAGAGTAGATCAGA+TGG | + | chr7.3:89901877-89901896 | MS.gene80919:intron | 40.0% | |
| TTCTACATTTCGGACACTAG+TGG | + | chr7.3:89902787-89902806 | MS.gene80919:intron | 40.0% | |
| TTCTACCCTATCGCACTAAT+TGG | - | chr7.3:89902046-89902065 | None:intergenic | 40.0% | |
| TTCTTCCTATAGGCCCAAAA+TGG | - | chr7.3:89902312-89902331 | None:intergenic | 40.0% | |
| TTGTAGAGATGAGGAGAATG+TGG | + | chr7.3:89901338-89901357 | MS.gene80919:CDS | 40.0% | |
| ! | CATTTAGAGCGCCACATTAT+AGG | - | chr7.3:89903054-89903073 | None:intergenic | 40.0% |
| ! | CCTTTATTTGACAACACCAC+TGG | + | chr7.3:89904446-89904465 | MS.gene80919:intron | 40.0% |
| ! | CTACAATTTTCTGTGATCCG+CGG | - | chr7.3:89904380-89904399 | None:intergenic | 40.0% |
| ! | CTATAATGTGGCGCTCTAAA+TGG | + | chr7.3:89903052-89903071 | MS.gene80919:CDS | 40.0% |
| ! | GTCTTAACTCTCTGGTTCAT+AGG | + | chr7.3:89902151-89902170 | MS.gene80919:intron | 40.0% |
| ! | TTCATCCATTTTGGGCCTAT+AGG | + | chr7.3:89902304-89902323 | MS.gene80919:intron | 40.0% |
| ! | TTGATAATCCGAAGTTTGGC+TGG | + | chr7.3:89902185-89902204 | MS.gene80919:intron | 40.0% |
| ! | TTGTGGTGGAAACTAGACTT+AGG | + | chr7.3:89901816-89901835 | MS.gene80919:intron | 40.0% |
| !! | AGGTTTTCATGATGATGTCG+TGG | + | chr7.3:89903442-89903461 | MS.gene80919:CDS | 40.0% |
| !! | CCAGTGGTGTTGTCAAATAA+AGG | - | chr7.3:89904449-89904468 | None:intergenic | 40.0% |
| !! | GGTAAAGAAATTCTGGTTCC+AGG | + | chr7.3:89903922-89903941 | MS.gene80919:CDS | 40.0% |
| !! | GGTTTTCATGATGATGTCGT+GGG | + | chr7.3:89903443-89903462 | MS.gene80919:CDS | 40.0% |
| AACCTCAAACTGGGTCCTAT+TGG | - | chr7.3:89904043-89904062 | None:intergenic | 45.0% | |
| AACTGGATATCGAATCGGTG+AGG | - | chr7.3:89901770-89901789 | None:intergenic | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr7.3:89901880-89901899 | MS.gene80919:intron | 45.0% | |
| AGAATACAGATACCATGGCC+GGG | - | chr7.3:89904330-89904349 | None:intergenic | 45.0% | |
| AGTATCTGAACGTGTCGTAC+AGG | - | chr7.3:89902526-89902545 | None:intergenic | 45.0% | |
| ATGTAGTTGACCCCACTTAG+TGG | + | chr7.3:89902087-89902106 | MS.gene80919:intron | 45.0% | |
| ATTGGACCGAACTAGGAAGT+AGG | + | chr7.3:89901574-89901593 | MS.gene80919:intron | 45.0% | |
| ATTTCCCTAGGAACACAAGG+AGG | + | chr7.3:89904762-89904781 | MS.gene80919:CDS | 45.0% | |
| CAAGTCAGTACCTAGATCTG+AGG | + | chr7.3:89903194-89903213 | MS.gene80919:CDS | 45.0% | |
| CATCCAAGACTCATTTCCCT+AGG | + | chr7.3:89904750-89904769 | MS.gene80919:CDS | 45.0% | |
| CTACCCTATCGCACTAATTG+GGG | - | chr7.3:89902044-89902063 | None:intergenic | 45.0% | |
| CTATTGGCAGACTCAACTGA+AGG | - | chr7.3:89904027-89904046 | None:intergenic | 45.0% | |
| CTCATTTCCCTAGGAACACA+AGG | + | chr7.3:89904759-89904778 | MS.gene80919:CDS | 45.0% | |
| CTTACCTTCCAGCCAAACTT+CGG | - | chr7.3:89902196-89902215 | None:intergenic | 45.0% | |
| CTTCAGTTGAGTCTGCCAAT+AGG | + | chr7.3:89904025-89904044 | MS.gene80919:CDS | 45.0% | |
| GAAGAAGAAGAAGGTGACCT+TGG | + | chr7.3:89901222-89901241 | MS.gene80919:CDS | 45.0% | |
| GAATCTATGAAGCACGGACA+CGG | - | chr7.3:89902824-89902843 | None:intergenic | 45.0% | |
| GGAGAAAGCCACTTCTATTG+AGG | + | chr7.3:89901529-89901548 | MS.gene80919:CDS | 45.0% | |
| GGGCTATAACATTGTGGTGT+AGG | - | chr7.3:89904418-89904437 | None:intergenic | 45.0% | |
| GGTACATTGTTCTGGTGGAA+AGG | + | chr7.3:89902598-89902617 | MS.gene80919:intron | 45.0% | |
| GTAGGAACTTTGCAGTTTGC+TGG | + | chr7.3:89901592-89901611 | MS.gene80919:intron | 45.0% | |
| GTCGTTGTCTTGTAGAGATG+AGG | + | chr7.3:89901329-89901348 | MS.gene80919:CDS | 45.0% | |
| GTTCCTAGGGAAATGAGTCT+TGG | - | chr7.3:89904756-89904775 | None:intergenic | 45.0% | |
| GTTGCAGAACAGAACTTTCC+AGG | - | chr7.3:89903835-89903854 | None:intergenic | 45.0% | |
| TAATCCGAAGTTTGGCTGGA+AGG | + | chr7.3:89902189-89902208 | MS.gene80919:intron | 45.0% | |
| TCAGATGTAGCGAAACTACC+TGG | - | chr7.3:89903943-89903962 | None:intergenic | 45.0% | |
| TGTAGTTGACCCCACTTAGT+GGG | + | chr7.3:89902088-89902107 | MS.gene80919:intron | 45.0% | |
| TGTTCGGTACATTGTTCTGG+TGG | + | chr7.3:89902593-89902612 | MS.gene80919:intron | 45.0% | |
| TTACCCTCCTTGTGTTCCTA+GGG | - | chr7.3:89904769-89904788 | None:intergenic | 45.0% | |
| TTCCAGCCAGGATTCAAACT+CGG | + | chr7.3:89902236-89902255 | MS.gene80919:intron | 45.0% | |
| TTCTCCCTGAACCTCAAACT+GGG | - | chr7.3:89904052-89904071 | None:intergenic | 45.0% | |
| TTTCCCTAGGAACACAAGGA+GGG | + | chr7.3:89904763-89904782 | MS.gene80919:CDS | 45.0% | |
| TTTCTCCCTGAACCTCAAAC+TGG | - | chr7.3:89904053-89904072 | None:intergenic | 45.0% | |
| ! | AATTTTCTGTGATCCGCGGT+TGG | - | chr7.3:89904376-89904395 | None:intergenic | 45.0% |
| ! | AGTGTCTGAAACATGTGCAC+AGG | - | chr7.3:89902499-89902518 | None:intergenic | 45.0% |
| ! | ATAGCGGGGCTATAACATTG+TGG | - | chr7.3:89904424-89904443 | None:intergenic | 45.0% |
| ! | ATGATGATGTCGTGGGTAAG+TGG | + | chr7.3:89903450-89903469 | MS.gene80919:intron | 45.0% |
| ! | TTCTGCATTCGGTGATTCAG+AGG | + | chr7.3:89901476-89901495 | MS.gene80919:CDS | 45.0% |
| !! | CTTTTAAGTGTTGCCAACCG+CGG | + | chr7.3:89904360-89904379 | MS.gene80919:intron | 45.0% |
| !! | GAACTTTGCAGTTTGCTGGT+TGG | + | chr7.3:89901596-89901615 | MS.gene80919:intron | 45.0% |
| !! | TTTGCTGGTTGGTTTGAGCT+CGG | + | chr7.3:89901607-89901626 | MS.gene80919:intron | 45.0% |
| AGGAGGGTAAGGAGGAAGTT+TGG | + | chr7.3:89904779-89904798 | MS.gene80919:CDS | 50.0% | |
| ATATCGAATCGGTGAGGCCT+CGG | - | chr7.3:89901764-89901783 | None:intergenic | 50.0% | |
| CAGAGGAGGTTGAATCACAG+CGG | + | chr7.3:89901493-89901512 | MS.gene80919:CDS | 50.0% | |
| CCACTTAGTGGGATAGGGTT+CGG | + | chr7.3:89902099-89902118 | MS.gene80919:intron | 50.0% | |
| CCTATCGCACTAATTGGGGT+CGG | - | chr7.3:89902040-89902059 | None:intergenic | 50.0% | |
| CCTCGGAGTCATGCTTCAAT+CGG | - | chr7.3:89901747-89901766 | None:intergenic | 50.0% | |
| CGAACCCTATCCCACTAAGT+GGG | - | chr7.3:89902101-89902120 | None:intergenic | 50.0% | |
| CGACCCCAATTAGTGCGATA+GGG | + | chr7.3:89902038-89902057 | MS.gene80919:intron | 50.0% | |
| CTAGGAACACAAGGAGGGTA+AGG | + | chr7.3:89904768-89904787 | MS.gene80919:CDS | 50.0% | |
| CTTACCCTCCTTGTGTTCCT+AGG | - | chr7.3:89904770-89904789 | None:intergenic | 50.0% | |
| GAACCCTATCCCACTAAGTG+GGG | - | chr7.3:89902100-89902119 | None:intergenic | 50.0% | |
| GAGGATAGTCAGATCGCTAG+AGG | + | chr7.3:89901899-89901918 | MS.gene80919:intron | 50.0% | |
| GGGCGTGGAAGATAATTGTG+TGG | + | chr7.3:89901392-89901411 | MS.gene80919:CDS | 50.0% | |
| TCCAGCCAGGATTCAAACTC+GGG | + | chr7.3:89902237-89902256 | MS.gene80919:intron | 50.0% | |
| TGACCCCACTTAGTGGGATA+GGG | + | chr7.3:89902094-89902113 | MS.gene80919:intron | 50.0% | |
| TGCCAATAGGACCCAGTTTG+AGG | + | chr7.3:89904038-89904057 | MS.gene80919:CDS | 50.0% | |
| TTGACCCCACTTAGTGGGAT+AGG | + | chr7.3:89902093-89902112 | MS.gene80919:intron | 50.0% | |
| ! | ACTCTCTGGTTCATAGGGCA+AGG | + | chr7.3:89902157-89902176 | MS.gene80919:intron | 50.0% |
| ! | AGGACCCAGTTTGAGGTTCA+GGG | + | chr7.3:89904045-89904064 | MS.gene80919:CDS | 50.0% |
| ! | CAAAACCAAGAGCACGATGC+AGG | - | chr7.3:89904138-89904157 | None:intergenic | 50.0% |
| ! | CTCTCTGGTTCATAGGGCAA+GGG | + | chr7.3:89902158-89902177 | MS.gene80919:intron | 50.0% |
| ! | TAGGACCCAGTTTGAGGTTC+AGG | + | chr7.3:89904044-89904063 | MS.gene80919:CDS | 50.0% |
| ! | TCTCTGGTTCATAGGGCAAG+GGG | + | chr7.3:89902159-89902178 | MS.gene80919:intron | 50.0% |
| ! | TGAATCACAGCGGAGGCATA+AGG | + | chr7.3:89901503-89901522 | MS.gene80919:CDS | 50.0% |
| ! | TGCATTCGGTGATTCAGAGG+AGG | + | chr7.3:89901479-89901498 | MS.gene80919:CDS | 50.0% |
| !! | GAATTCTGGTTTCAAGGGCG+TGG | + | chr7.3:89901377-89901396 | MS.gene80919:CDS | 50.0% |
| ACCCGAGTTTGAATCCTGGC+TGG | - | chr7.3:89902241-89902260 | None:intergenic | 55.0% | |
| AGGAGGTTGAATCACAGCGG+AGG | + | chr7.3:89901496-89901515 | MS.gene80919:CDS | 55.0% | |
| AGTCAGATCGCTAGAGGCAG+AGG | + | chr7.3:89901905-89901924 | MS.gene80919:intron | 55.0% | |
| CATTGCCTGCATCGTGCTCT+TGG | + | chr7.3:89904130-89904149 | MS.gene80919:intron | 55.0% | |
| CCGAACCCTATCCCACTAAG+TGG | - | chr7.3:89902102-89902121 | None:intergenic | 55.0% | |
| CCGACCCCAATTAGTGCGAT+AGG | + | chr7.3:89902037-89902056 | MS.gene80919:intron | 55.0% | |
| CCGATTGAAGCATGACTCCG+AGG | + | chr7.3:89901744-89901763 | MS.gene80919:intron | 55.0% | |
| CTACGGGACCATCATGAGCT+TGG | - | chr7.3:89903421-89903440 | None:intergenic | 55.0% | |
| GCTCATGATGGTCCCGTAGA+AGG | + | chr7.3:89903422-89903441 | MS.gene80919:CDS | 55.0% | |
| GGAACACAAGGAGGGTAAGG+AGG | + | chr7.3:89904771-89904790 | MS.gene80919:CDS | 55.0% | |
| TACCATGGCCGGGTTATGAC+AGG | - | chr7.3:89904320-89904339 | None:intergenic | 55.0% | |
| ! | CAAGAGCACGATGCAGGCAA+TGG | - | chr7.3:89904132-89904151 | None:intergenic | 55.0% |
| CACCTGTCATAACCCGGCCA+TGG | + | chr7.3:89904315-89904334 | MS.gene80919:intron | 60.0% | |
| GCTAGAGGCAGAGGTAGTCC+TGG | + | chr7.3:89901914-89901933 | MS.gene80919:intron | 60.0% | |
| ! | CACAGCGGAGGCATAAGGTG+TGG | + | chr7.3:89901508-89901527 | MS.gene80919:CDS | 60.0% |
| GGGCAGAGATGGTTCCAGCC+AGG | + | chr7.3:89902224-89902243 | MS.gene80919:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 89901177 | 89904808 | 89901177 | ID=MS.gene80919 |
| chr7.3 | mRNA | 89901177 | 89904808 | 89901177 | ID=MS.gene80919.t1;Parent=MS.gene80919 |
| chr7.3 | exon | 89901177 | 89901550 | 89901177 | ID=MS.gene80919.t1.exon1;Parent=MS.gene80919.t1 |
| chr7.3 | CDS | 89901177 | 89901550 | 89901177 | ID=cds.MS.gene80919.t1;Parent=MS.gene80919.t1 |
| chr7.3 | exon | 89903011 | 89903318 | 89903011 | ID=MS.gene80919.t1.exon2;Parent=MS.gene80919.t1 |
| chr7.3 | CDS | 89903011 | 89903318 | 89903011 | ID=cds.MS.gene80919.t1;Parent=MS.gene80919.t1 |
| chr7.3 | exon | 89903408 | 89903464 | 89903408 | ID=MS.gene80919.t1.exon3;Parent=MS.gene80919.t1 |
| chr7.3 | CDS | 89903408 | 89903464 | 89903408 | ID=cds.MS.gene80919.t1;Parent=MS.gene80919.t1 |
| chr7.3 | exon | 89903665 | 89904074 | 89903665 | ID=MS.gene80919.t1.exon4;Parent=MS.gene80919.t1 |
| chr7.3 | CDS | 89903665 | 89904074 | 89903665 | ID=cds.MS.gene80919.t1;Parent=MS.gene80919.t1 |
| chr7.3 | exon | 89904626 | 89904808 | 89904626 | ID=MS.gene80919.t1.exon5;Parent=MS.gene80919.t1 |
| chr7.3 | CDS | 89904626 | 89904808 | 89904626 | ID=cds.MS.gene80919.t1;Parent=MS.gene80919.t1 |
| Gene Sequence |
| Protein sequence |
