Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85316.t1 | ABN08343.1 | 98.9 | 179 | 2 | 0 | 1 | 179 | 80 | 258 | 1.40E-102 | 382.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85316.t1 | Q43062 | 78.3 | 180 | 38 | 1 | 1 | 179 | 343 | 522 | 1.6e-83 | 310.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85316.t1 | G7IQB6 | 98.9 | 179 | 2 | 0 | 1 | 179 | 349 | 527 | 1.0e-102 | 382.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene85316 | 0.803844 | 2.87E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene85316 | 0.833127 | 6.38E-56 | -1.69E-46 |
| MS.gene049356 | MS.gene85316 | 0.80894 | 2.42E-50 | -1.69E-46 |
| MS.gene049491 | MS.gene85316 | 0.80698 | 6.32E-50 | -1.69E-46 |
| MS.gene049661 | MS.gene85316 | 0.838509 | 2.76E-57 | -1.69E-46 |
| MS.gene049662 | MS.gene85316 | 0.831207 | 1.90E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene85316 | 0.842621 | 2.31E-58 | -1.69E-46 |
| MS.gene050076 | MS.gene85316 | 0.802573 | 5.26E-49 | -1.69E-46 |
| MS.gene050128 | MS.gene85316 | 0.850381 | 1.76E-60 | -1.69E-46 |
| MS.gene050301 | MS.gene85316 | 0.878279 | 3.19E-69 | -1.69E-46 |
| MS.gene050397 | MS.gene85316 | 0.804621 | 1.98E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene85316 | 0.820142 | 8.02E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene85316 | 0.824926 | 6.20E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene85316 | 0.843494 | 1.35E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene85316 | 0.802098 | 6.59E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene85316 | 0.809968 | 1.46E-50 | -1.69E-46 |
| MS.gene051582 | MS.gene85316 | 0.800161 | 1.64E-48 | -1.69E-46 |
| MS.gene051860 | MS.gene85316 | 0.818623 | 1.78E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene85316 | 0.817252 | 3.63E-52 | -1.69E-46 |
| MS.gene052178 | MS.gene85316 | 0.813511 | 2.47E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene85316 | 0.844901 | 5.67E-59 | -1.69E-46 |
| MS.gene052207 | MS.gene85316 | 0.835515 | 1.60E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene85316 | 0.826325 | 2.89E-54 | -1.69E-46 |
| MS.gene052310 | MS.gene85316 | 0.809359 | 1.97E-50 | -1.69E-46 |
| MS.gene052326 | MS.gene85316 | 0.824955 | 6.10E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene85316 | 0.818742 | 1.67E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene85316 | 0.807352 | 5.27E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene85316 | 0.811931 | 5.47E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene85316 | 0.828555 | 8.42E-55 | -1.69E-46 |
| MS.gene053813 | MS.gene85316 | 0.816974 | 4.19E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene85316 | 0.860998 | 1.40E-63 | -1.69E-46 |
| MS.gene054010 | MS.gene85316 | 0.839469 | 1.56E-57 | -1.69E-46 |
| MS.gene054011 | MS.gene85316 | 0.851841 | 6.83E-61 | -1.69E-46 |
| MS.gene054012 | MS.gene85316 | 0.836104 | 1.14E-56 | -1.69E-46 |
| MS.gene054013 | MS.gene85316 | 0.83582 | 1.34E-56 | -1.69E-46 |
| MS.gene054123 | MS.gene85316 | 0.848393 | 6.31E-60 | -1.69E-46 |
| MS.gene054376 | MS.gene85316 | 0.811603 | 6.45E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene85316 | 0.814987 | 1.16E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene85316 | 0.800139 | 1.66E-48 | -1.69E-46 |
| MS.gene055116 | MS.gene85316 | 0.840979 | 6.27E-58 | -1.69E-46 |
| MS.gene055277 | MS.gene85316 | 0.858547 | 7.64E-63 | -1.69E-46 |
| MS.gene055390 | MS.gene85316 | 0.85417 | 1.47E-61 | -1.69E-46 |
| MS.gene055422 | MS.gene85316 | 0.875348 | 3.31E-68 | -1.69E-46 |
| MS.gene055428 | MS.gene85316 | 0.842301 | 2.81E-58 | -1.69E-46 |
| MS.gene055604 | MS.gene85316 | 0.862159 | 6.17E-64 | -1.69E-46 |
| MS.gene055712 | MS.gene85316 | 0.8213 | 4.35E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene85316 | 0.827229 | 1.76E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene85316 | 0.848751 | 5.02E-60 | -1.69E-46 |
| MS.gene056410 | MS.gene85316 | 0.818073 | 2.37E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene85316 | 0.817547 | 3.12E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene85316 | 0.809708 | 1.66E-50 | -1.69E-46 |
| MS.gene056902 | MS.gene85316 | 0.84202 | 3.34E-58 | -1.69E-46 |
| MS.gene056931 | MS.gene85316 | 0.863503 | 2.38E-64 | -1.69E-46 |
| MS.gene056933 | MS.gene85316 | 0.85978 | 3.26E-63 | -1.69E-46 |
| MS.gene056935 | MS.gene85316 | 0.855983 | 4.37E-62 | -1.69E-46 |
| MS.gene05702 | MS.gene85316 | 0.838183 | 3.35E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene85316 | 0.811595 | 6.47E-51 | -1.69E-46 |
| MS.gene057245 | MS.gene85316 | 0.821673 | 3.56E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene85316 | 0.836707 | 7.99E-57 | -1.69E-46 |
| MS.gene057449 | MS.gene85316 | 0.846107 | 2.67E-59 | -1.69E-46 |
| MS.gene057450 | MS.gene85316 | 0.842821 | 2.05E-58 | -1.69E-46 |
| MS.gene057469 | MS.gene85316 | 0.842967 | 1.87E-58 | -1.69E-46 |
| MS.gene057749 | MS.gene85316 | 0.806981 | 6.32E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene85316 | 0.801023 | 1.09E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene85316 | 0.841277 | 5.24E-58 | -1.69E-46 |
| MS.gene058082 | MS.gene85316 | 0.816436 | 5.54E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene85316 | 0.826597 | 2.49E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene85316 | 0.820072 | 8.32E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene85316 | 0.873744 | 1.16E-67 | -1.69E-46 |
| MS.gene05886 | MS.gene85316 | 0.845418 | 4.11E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene85316 | 0.816107 | 6.56E-52 | -1.69E-46 |
| MS.gene058949 | MS.gene85316 | 0.818544 | 1.85E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene85316 | 0.843951 | 1.02E-58 | -1.69E-46 |
| MS.gene059228 | MS.gene85316 | 0.81485 | 1.25E-51 | -1.69E-46 |
| MS.gene059294 | MS.gene85316 | 0.814839 | 1.26E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene85316 | 0.803591 | 3.24E-49 | -1.69E-46 |
| MS.gene059597 | MS.gene85316 | 0.839102 | 1.94E-57 | -1.69E-46 |
| MS.gene059676 | MS.gene85316 | 0.839292 | 1.73E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene85316 | 0.853407 | 2.44E-61 | -1.69E-46 |
| MS.gene059692 | MS.gene85316 | 0.854244 | 1.40E-61 | -1.69E-46 |
| MS.gene059695 | MS.gene85316 | 0.848241 | 6.95E-60 | -1.69E-46 |
| MS.gene059711 | MS.gene85316 | 0.824609 | 7.36E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene85316 | 0.820976 | 5.16E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene85316 | 0.818629 | 1.77E-52 | -1.69E-46 |
| MS.gene059974 | MS.gene85316 | 0.808361 | 3.22E-50 | -1.69E-46 |
| MS.gene060005 | MS.gene85316 | 0.823428 | 1.39E-53 | -1.69E-46 |
| MS.gene06037 | MS.gene85316 | 0.842235 | 2.93E-58 | -1.69E-46 |
| MS.gene060495 | MS.gene85316 | 0.820565 | 6.41E-53 | -1.69E-46 |
| MS.gene060559 | MS.gene85316 | 0.862097 | 6.45E-64 | -1.69E-46 |
| MS.gene061049 | MS.gene85316 | 0.854925 | 8.89E-62 | -1.69E-46 |
| MS.gene061051 | MS.gene85316 | -0.831101 | 2.02E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85316.t1 | MTR_2g044880 | 98.883 | 179 | 2 | 0 | 1 | 179 | 349 | 527 | 6.51e-133 | 382 |
| MS.gene85316.t1 | MTR_4g087980 | 78.212 | 179 | 39 | 0 | 1 | 179 | 340 | 518 | 9.92e-108 | 318 |
| MS.gene85316.t1 | MTR_4g087970 | 67.416 | 178 | 58 | 0 | 2 | 179 | 342 | 519 | 6.23e-90 | 272 |
| MS.gene85316.t1 | MTR_1g008140 | 60.795 | 176 | 69 | 0 | 2 | 177 | 432 | 607 | 5.54e-76 | 238 |
| MS.gene85316.t1 | MTR_3g091380 | 60.227 | 176 | 70 | 0 | 2 | 177 | 422 | 597 | 2.55e-75 | 236 |
| MS.gene85316.t1 | MTR_3g010770 | 59.322 | 177 | 71 | 1 | 1 | 177 | 400 | 575 | 1.05e-73 | 232 |
| MS.gene85316.t1 | MTR_0618s0020 | 55.114 | 176 | 79 | 0 | 2 | 177 | 53 | 228 | 2.54e-71 | 215 |
| MS.gene85316.t1 | MTR_4g025690 | 57.386 | 176 | 74 | 1 | 2 | 177 | 339 | 513 | 1.58e-70 | 222 |
| MS.gene85316.t1 | MTR_0458s0030 | 55.932 | 177 | 77 | 1 | 1 | 177 | 139 | 314 | 2.27e-70 | 216 |
| MS.gene85316.t1 | MTR_1g088040 | 55.932 | 177 | 77 | 1 | 1 | 177 | 139 | 314 | 2.27e-70 | 216 |
| MS.gene85316.t1 | MTR_8g104645 | 55.114 | 176 | 79 | 0 | 2 | 177 | 197 | 372 | 3.57e-70 | 217 |
| MS.gene85316.t1 | MTR_7g108905 | 55.491 | 173 | 77 | 0 | 1 | 173 | 380 | 552 | 3.91e-70 | 222 |
| MS.gene85316.t1 | MTR_7g050980 | 55.866 | 179 | 75 | 2 | 2 | 177 | 378 | 555 | 2.75e-69 | 219 |
| MS.gene85316.t1 | MTR_8g104655 | 55.682 | 176 | 78 | 0 | 2 | 177 | 366 | 541 | 1.21e-68 | 218 |
| MS.gene85316.t1 | MTR_4g025670 | 51.705 | 176 | 85 | 0 | 2 | 177 | 314 | 489 | 1.31e-68 | 216 |
| MS.gene85316.t1 | MTR_8g042910 | 57.627 | 177 | 74 | 1 | 1 | 177 | 437 | 612 | 1.76e-68 | 219 |
| MS.gene85316.t1 | MTR_7g050870 | 55.866 | 179 | 75 | 2 | 2 | 177 | 377 | 554 | 2.49e-68 | 217 |
| MS.gene85316.t1 | MTR_7g050950 | 55.866 | 179 | 74 | 3 | 2 | 177 | 377 | 553 | 3.29e-68 | 217 |
| MS.gene85316.t1 | MTR_1g088020 | 55.932 | 177 | 77 | 1 | 1 | 177 | 380 | 555 | 4.28e-68 | 216 |
| MS.gene85316.t1 | MTR_7g112580 | 56.497 | 177 | 68 | 2 | 1 | 177 | 375 | 542 | 2.24e-67 | 214 |
| MS.gene85316.t1 | MTR_1g054880 | 54.802 | 177 | 79 | 1 | 1 | 177 | 383 | 558 | 4.34e-67 | 214 |
| MS.gene85316.t1 | MTR_1g083520 | 56.111 | 180 | 75 | 2 | 1 | 177 | 350 | 528 | 3.99e-65 | 208 |
| MS.gene85316.t1 | MTR_7g108900 | 53.672 | 177 | 81 | 1 | 1 | 177 | 385 | 560 | 2.86e-64 | 207 |
| MS.gene85316.t1 | MTR_4g025730 | 55.114 | 176 | 76 | 2 | 2 | 177 | 337 | 509 | 3.52e-64 | 205 |
| MS.gene85316.t1 | MTR_7g108890 | 54.190 | 179 | 77 | 3 | 1 | 177 | 387 | 562 | 2.73e-63 | 204 |
| MS.gene85316.t1 | MTR_1g088225 | 54.802 | 177 | 77 | 2 | 1 | 177 | 380 | 553 | 2.90e-63 | 204 |
| MS.gene85316.t1 | MTR_8g023310 | 55.114 | 176 | 79 | 0 | 2 | 177 | 414 | 589 | 7.99e-63 | 203 |
| MS.gene85316.t1 | MTR_7g108875 | 52.542 | 177 | 83 | 1 | 1 | 177 | 389 | 564 | 2.81e-62 | 202 |
| MS.gene85316.t1 | MTR_3g008720 | 53.107 | 177 | 82 | 1 | 2 | 177 | 351 | 527 | 1.83e-61 | 199 |
| MS.gene85316.t1 | MTR_3g008640 | 53.107 | 177 | 82 | 1 | 2 | 177 | 351 | 527 | 1.85e-61 | 199 |
| MS.gene85316.t1 | MTR_4g035980 | 51.977 | 177 | 84 | 1 | 2 | 177 | 363 | 539 | 3.44e-61 | 198 |
| MS.gene85316.t1 | MTR_7g053360 | 53.672 | 177 | 81 | 1 | 2 | 177 | 351 | 527 | 4.11e-61 | 197 |
| MS.gene85316.t1 | MTR_3g008700 | 52.542 | 177 | 83 | 1 | 2 | 177 | 351 | 527 | 4.81e-61 | 197 |
| MS.gene85316.t1 | MTR_3g033690 | 51.977 | 177 | 84 | 1 | 2 | 177 | 350 | 526 | 6.98e-60 | 194 |
| MS.gene85316.t1 | MTR_8g042900 | 51.136 | 176 | 81 | 2 | 2 | 177 | 411 | 581 | 2.02e-59 | 194 |
| MS.gene85316.t1 | MTR_1g086210 | 50.000 | 182 | 85 | 1 | 2 | 177 | 388 | 569 | 7.16e-59 | 193 |
| MS.gene85316.t1 | MTR_8g104580 | 50.000 | 176 | 80 | 1 | 2 | 177 | 333 | 500 | 1.14e-58 | 191 |
| MS.gene85316.t1 | MTR_4g124520 | 48.876 | 178 | 88 | 2 | 2 | 177 | 345 | 521 | 1.68e-57 | 188 |
| MS.gene85316.t1 | MTR_2g044810 | 47.159 | 176 | 92 | 1 | 2 | 177 | 291 | 465 | 2.07e-57 | 187 |
| MS.gene85316.t1 | MTR_4g124550 | 50.568 | 176 | 85 | 2 | 2 | 177 | 420 | 593 | 2.40e-57 | 189 |
| MS.gene85316.t1 | MTR_2g044810 | 47.159 | 176 | 92 | 1 | 2 | 177 | 360 | 534 | 6.51e-57 | 187 |
| MS.gene85316.t1 | MTR_2g044660 | 52.841 | 176 | 78 | 4 | 2 | 177 | 462 | 632 | 5.94e-56 | 186 |
| MS.gene85316.t1 | MTR_1g083510 | 46.667 | 180 | 89 | 3 | 1 | 176 | 406 | 582 | 8.75e-54 | 179 |
| MS.gene85316.t1 | MTR_3g010780 | 46.023 | 176 | 90 | 2 | 2 | 177 | 404 | 574 | 1.63e-51 | 173 |
| MS.gene85316.t1 | MTR_1g086190 | 46.591 | 176 | 92 | 2 | 2 | 177 | 390 | 563 | 1.06e-50 | 171 |
| MS.gene85316.t1 | MTR_7g110560 | 44.633 | 177 | 95 | 2 | 2 | 177 | 375 | 549 | 3.13e-50 | 169 |
| MS.gene85316.t1 | MTR_4g005170 | 43.750 | 176 | 95 | 2 | 1 | 173 | 397 | 571 | 2.53e-49 | 168 |
| MS.gene85316.t1 | MTR_1g083470 | 43.182 | 176 | 96 | 2 | 1 | 173 | 392 | 566 | 3.50e-49 | 167 |
| MS.gene85316.t1 | MTR_1g083500 | 43.182 | 176 | 96 | 2 | 1 | 173 | 392 | 566 | 3.50e-49 | 167 |
| MS.gene85316.t1 | MTR_8g023150 | 45.556 | 180 | 88 | 3 | 2 | 177 | 409 | 582 | 4.92e-49 | 167 |
| MS.gene85316.t1 | MTR_1g083490 | 43.750 | 176 | 95 | 2 | 1 | 173 | 397 | 571 | 5.66e-49 | 167 |
| MS.gene85316.t1 | MTR_7g112590 | 44.134 | 179 | 96 | 2 | 1 | 176 | 405 | 582 | 6.97e-49 | 167 |
| MS.gene85316.t1 | MTR_4g005180 | 43.182 | 176 | 96 | 2 | 1 | 173 | 379 | 553 | 3.30e-48 | 164 |
| MS.gene85316.t1 | MTR_8g093460 | 42.021 | 188 | 90 | 4 | 1 | 176 | 370 | 550 | 5.79e-48 | 164 |
| MS.gene85316.t1 | MTR_7g110490 | 44.751 | 181 | 91 | 2 | 2 | 179 | 394 | 568 | 7.24e-46 | 158 |
| MS.gene85316.t1 | MTR_7g110510 | 44.751 | 181 | 91 | 2 | 2 | 179 | 394 | 568 | 7.24e-46 | 158 |
| MS.gene85316.t1 | MTR_3g095920 | 41.489 | 188 | 91 | 5 | 1 | 176 | 383 | 563 | 1.49e-45 | 157 |
| MS.gene85316.t1 | MTR_7g110440 | 43.646 | 181 | 93 | 2 | 2 | 179 | 394 | 568 | 3.61e-44 | 154 |
| MS.gene85316.t1 | MTR_8g088610 | 41.954 | 174 | 98 | 2 | 2 | 174 | 202 | 373 | 4.66e-44 | 150 |
| MS.gene85316.t1 | MTR_2g436040 | 39.665 | 179 | 100 | 3 | 2 | 174 | 367 | 543 | 2.31e-42 | 149 |
| MS.gene85316.t1 | MTR_7g111560 | 41.176 | 187 | 93 | 4 | 2 | 176 | 374 | 555 | 2.61e-40 | 143 |
| MS.gene85316.t1 | MTR_4g120280 | 36.464 | 181 | 107 | 3 | 2 | 176 | 393 | 571 | 8.69e-40 | 142 |
| MS.gene85316.t1 | MTR_4g120290 | 35.359 | 181 | 109 | 3 | 2 | 176 | 393 | 571 | 2.04e-38 | 138 |
| MS.gene85316.t1 | MTR_2g105560 | 35.795 | 176 | 109 | 2 | 2 | 177 | 168 | 339 | 3.92e-38 | 134 |
| MS.gene85316.t1 | MTR_5g083620 | 39.326 | 178 | 104 | 3 | 2 | 177 | 181 | 356 | 2.38e-37 | 132 |
| MS.gene85316.t1 | MTR_7g107180 | 35.795 | 176 | 109 | 2 | 2 | 177 | 136 | 307 | 1.24e-36 | 129 |
| MS.gene85316.t1 | MTR_7g110420 | 39.037 | 187 | 105 | 3 | 2 | 179 | 394 | 580 | 1.91e-36 | 133 |
| MS.gene85316.t1 | MTR_0458s0010 | 55.046 | 109 | 46 | 2 | 69 | 177 | 413 | 518 | 7.31e-36 | 130 |
| MS.gene85316.t1 | MTR_2g436050 | 36.667 | 180 | 108 | 2 | 2 | 176 | 385 | 563 | 3.68e-34 | 126 |
| MS.gene85316.t1 | MTR_7g092780 | 38.953 | 172 | 88 | 4 | 2 | 168 | 230 | 389 | 1.68e-31 | 117 |
| MS.gene85316.t1 | MTR_6g042690 | 39.855 | 138 | 69 | 2 | 2 | 139 | 180 | 303 | 3.93e-30 | 112 |
| MS.gene85316.t1 | MTR_6g042660 | 37.681 | 138 | 72 | 2 | 2 | 139 | 173 | 296 | 4.51e-29 | 109 |
| MS.gene85316.t1 | MTR_5g095490 | 35.366 | 164 | 91 | 3 | 3 | 166 | 209 | 357 | 3.56e-28 | 107 |
| MS.gene85316.t1 | MTR_1g033050 | 37.857 | 140 | 76 | 2 | 2 | 139 | 154 | 284 | 5.98e-28 | 106 |
| MS.gene85316.t1 | MTR_7g102600 | 34.731 | 167 | 95 | 4 | 2 | 166 | 239 | 393 | 1.19e-27 | 107 |
| MS.gene85316.t1 | MTR_7g110430 | 38.462 | 143 | 79 | 2 | 40 | 179 | 398 | 534 | 2.31e-27 | 107 |
| MS.gene85316.t1 | MTR_6g012800 | 34.375 | 160 | 91 | 4 | 2 | 161 | 151 | 296 | 3.52e-27 | 104 |
| MS.gene85316.t1 | MTR_2g033970 | 34.524 | 168 | 97 | 4 | 2 | 168 | 193 | 348 | 1.31e-26 | 103 |
| MS.gene85316.t1 | MTR_1g086540 | 34.146 | 164 | 93 | 4 | 3 | 166 | 196 | 344 | 2.46e-26 | 102 |
| MS.gene85316.t1 | MTR_8g102380 | 31.515 | 165 | 98 | 4 | 2 | 166 | 228 | 377 | 1.67e-25 | 101 |
| MS.gene85316.t1 | MTR_6g088810 | 32.121 | 165 | 97 | 4 | 2 | 166 | 228 | 377 | 2.13e-25 | 100 |
| MS.gene85316.t1 | MTR_8g036225 | 35.838 | 173 | 95 | 4 | 2 | 169 | 167 | 328 | 2.36e-25 | 100 |
| MS.gene85316.t1 | MTR_2g039530 | 48.276 | 116 | 46 | 4 | 30 | 143 | 215 | 318 | 1.36e-24 | 98.2 |
| MS.gene85316.t1 | MTR_6g024165 | 36.145 | 166 | 88 | 6 | 3 | 166 | 185 | 334 | 7.39e-24 | 96.3 |
| MS.gene85316.t1 | MTR_5g093970 | 33.133 | 166 | 98 | 3 | 2 | 166 | 176 | 329 | 1.59e-23 | 95.1 |
| MS.gene85316.t1 | MTR_5g088300 | 33.929 | 168 | 93 | 4 | 2 | 166 | 164 | 316 | 1.50e-22 | 92.4 |
| MS.gene85316.t1 | MTR_4g051810 | 32.121 | 165 | 101 | 2 | 2 | 166 | 164 | 317 | 1.55e-22 | 92.4 |
| MS.gene85316.t1 | MTR_0408s0030 | 38.211 | 123 | 61 | 3 | 20 | 139 | 13 | 123 | 1.13e-21 | 86.3 |
| MS.gene85316.t1 | MTR_7g011530 | 30.000 | 160 | 98 | 3 | 2 | 161 | 151 | 296 | 1.53e-20 | 86.7 |
| MS.gene85316.t1 | MTR_8g102380 | 34.862 | 109 | 59 | 2 | 2 | 110 | 228 | 324 | 8.58e-20 | 85.1 |
| MS.gene85316.t1 | MTR_4g124740 | 31.515 | 165 | 90 | 6 | 2 | 166 | 198 | 339 | 1.09e-19 | 84.7 |
| MS.gene85316.t1 | MTR_5g012600 | 27.811 | 169 | 106 | 4 | 2 | 169 | 209 | 362 | 3.07e-19 | 84.0 |
| MS.gene85316.t1 | MTR_5g083590 | 31.250 | 176 | 85 | 3 | 3 | 177 | 128 | 268 | 9.05e-19 | 81.3 |
| MS.gene85316.t1 | MTR_5g088280 | 32.143 | 168 | 96 | 4 | 2 | 166 | 166 | 318 | 3.12e-18 | 80.9 |
| MS.gene85316.t1 | MTR_5g088290 | 30.303 | 165 | 103 | 3 | 2 | 166 | 176 | 328 | 8.46e-18 | 79.7 |
| MS.gene85316.t1 | MTR_2g436600 | 32.164 | 171 | 92 | 7 | 2 | 168 | 188 | 338 | 1.92e-17 | 78.6 |
| MS.gene85316.t1 | MTR_2g073390 | 31.138 | 167 | 96 | 5 | 3 | 166 | 211 | 361 | 1.42e-15 | 73.6 |
| MS.gene85316.t1 | MTR_4g074290 | 29.697 | 165 | 101 | 5 | 3 | 166 | 211 | 361 | 3.68e-15 | 72.4 |
| MS.gene85316.t1 | MTR_6g024200 | 35.200 | 125 | 68 | 5 | 43 | 166 | 164 | 276 | 4.86e-14 | 68.6 |
| MS.gene85316.t1 | MTR_0009s0350 | 31.496 | 127 | 75 | 3 | 3 | 128 | 211 | 326 | 2.66e-13 | 67.0 |
| MS.gene85316.t1 | MTR_0009s0340 | 31.496 | 127 | 75 | 3 | 3 | 128 | 211 | 326 | 2.66e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85316.t1 | AT4G33220 | 73.446 | 177 | 47 | 0 | 1 | 177 | 226 | 402 | 2.91e-101 | 297 |
| MS.gene85316.t1 | AT4G33220 | 73.446 | 177 | 47 | 0 | 1 | 177 | 347 | 523 | 4.90e-100 | 298 |
| MS.gene85316.t1 | AT3G43270 | 72.881 | 177 | 48 | 0 | 1 | 177 | 349 | 525 | 4.97e-99 | 296 |
| MS.gene85316.t1 | AT5G53370 | 59.091 | 176 | 72 | 0 | 2 | 177 | 410 | 585 | 3.48e-73 | 231 |
| MS.gene85316.t1 | AT5G53370 | 59.091 | 176 | 72 | 0 | 2 | 177 | 446 | 621 | 8.66e-73 | 230 |
| MS.gene85316.t1 | AT3G10720 | 57.627 | 177 | 74 | 1 | 1 | 177 | 84 | 259 | 1.50e-72 | 219 |
| MS.gene85316.t1 | AT3G49220 | 57.865 | 178 | 75 | 0 | 2 | 179 | 421 | 598 | 3.64e-71 | 226 |
| MS.gene85316.t1 | AT3G49220 | 57.865 | 178 | 75 | 0 | 2 | 179 | 466 | 643 | 9.41e-71 | 226 |
| MS.gene85316.t1 | AT3G10720 | 57.627 | 177 | 74 | 1 | 1 | 177 | 440 | 615 | 1.51e-69 | 222 |
| MS.gene85316.t1 | AT4G02330 | 56.497 | 177 | 76 | 1 | 1 | 177 | 396 | 571 | 1.63e-68 | 218 |
| MS.gene85316.t1 | AT1G02810 | 58.427 | 178 | 71 | 3 | 1 | 177 | 402 | 577 | 9.32e-68 | 216 |
| MS.gene85316.t1 | AT5G04970 | 57.062 | 177 | 75 | 1 | 1 | 177 | 445 | 620 | 1.08e-67 | 217 |
| MS.gene85316.t1 | AT3G60730 | 50.847 | 177 | 87 | 0 | 1 | 177 | 343 | 519 | 2.94e-67 | 214 |
| MS.gene85316.t1 | AT1G53830 | 55.682 | 176 | 78 | 0 | 2 | 177 | 412 | 587 | 3.54e-65 | 210 |
| MS.gene85316.t1 | AT2G45220 | 53.107 | 177 | 79 | 3 | 2 | 177 | 338 | 511 | 7.21e-64 | 204 |
| MS.gene85316.t1 | AT1G11580 | 53.757 | 173 | 80 | 0 | 1 | 173 | 381 | 553 | 7.22e-64 | 206 |
| MS.gene85316.t1 | AT1G11580 | 53.757 | 173 | 80 | 0 | 1 | 173 | 402 | 574 | 1.19e-63 | 206 |
| MS.gene85316.t1 | AT3G14310 | 54.545 | 176 | 80 | 0 | 2 | 177 | 417 | 592 | 2.17e-63 | 205 |
| MS.gene85316.t1 | AT3G05620 | 55.056 | 178 | 70 | 2 | 1 | 178 | 375 | 542 | 1.02e-62 | 202 |
| MS.gene85316.t1 | AT5G27870 | 52.841 | 176 | 82 | 1 | 2 | 177 | 388 | 562 | 1.12e-62 | 206 |
| MS.gene85316.t1 | AT2G47550 | 53.107 | 177 | 82 | 1 | 1 | 177 | 383 | 558 | 2.96e-62 | 201 |
| MS.gene85316.t1 | AT3G05610 | 52.273 | 176 | 83 | 1 | 2 | 177 | 391 | 565 | 4.72e-62 | 203 |
| MS.gene85316.t1 | AT1G23200 | 51.705 | 176 | 76 | 1 | 2 | 177 | 388 | 554 | 5.59e-62 | 201 |
| MS.gene85316.t1 | AT4G02320 | 51.705 | 176 | 85 | 0 | 2 | 177 | 343 | 518 | 1.21e-61 | 199 |
| MS.gene85316.t1 | AT2G26450 | 52.542 | 177 | 81 | 3 | 2 | 177 | 437 | 611 | 2.08e-61 | 200 |
| MS.gene85316.t1 | AT2G43050 | 51.136 | 176 | 77 | 1 | 2 | 177 | 350 | 516 | 3.88e-60 | 195 |
| MS.gene85316.t1 | AT5G49180 | 52.326 | 172 | 81 | 1 | 2 | 173 | 396 | 566 | 4.47e-60 | 196 |
| MS.gene85316.t1 | AT4G02300 | 48.864 | 176 | 90 | 0 | 2 | 177 | 357 | 532 | 3.58e-59 | 193 |
| MS.gene85316.t1 | AT3G59010 | 52.273 | 176 | 74 | 2 | 2 | 177 | 363 | 528 | 4.41e-59 | 192 |
| MS.gene85316.t1 | AT3G47400 | 50.562 | 178 | 86 | 1 | 2 | 177 | 417 | 594 | 3.17e-58 | 191 |
| MS.gene85316.t1 | AT5G51490 | 50.562 | 178 | 86 | 1 | 2 | 177 | 359 | 536 | 4.54e-58 | 190 |
| MS.gene85316.t1 | AT4G33230 | 50.847 | 177 | 84 | 3 | 2 | 177 | 432 | 606 | 3.77e-57 | 189 |
| MS.gene85316.t1 | AT3G06830 | 49.425 | 174 | 87 | 1 | 2 | 175 | 394 | 566 | 9.31e-57 | 187 |
| MS.gene85316.t1 | AT5G04960 | 50.000 | 174 | 83 | 1 | 2 | 175 | 393 | 562 | 1.62e-56 | 186 |
| MS.gene85316.t1 | AT2G26440 | 49.432 | 176 | 88 | 1 | 2 | 177 | 373 | 547 | 1.59e-55 | 184 |
| MS.gene85316.t1 | AT3G10710 | 48.864 | 176 | 85 | 2 | 2 | 177 | 391 | 561 | 1.81e-54 | 181 |
| MS.gene85316.t1 | AT5G51500 | 48.876 | 178 | 89 | 1 | 2 | 177 | 363 | 540 | 2.11e-54 | 181 |
| MS.gene85316.t1 | AT4G03930 | 47.159 | 176 | 91 | 1 | 2 | 177 | 351 | 524 | 8.78e-54 | 178 |
| MS.gene85316.t1 | AT1G11590 | 47.727 | 176 | 90 | 1 | 2 | 177 | 351 | 524 | 1.23e-53 | 178 |
| MS.gene85316.t1 | AT3G27980 | 46.023 | 176 | 93 | 1 | 2 | 177 | 324 | 497 | 3.72e-53 | 176 |
| MS.gene85316.t1 | AT5G20860 | 46.111 | 180 | 93 | 3 | 1 | 177 | 360 | 538 | 1.44e-52 | 176 |
| MS.gene85316.t1 | AT1G53840 | 45.614 | 171 | 87 | 2 | 2 | 171 | 416 | 581 | 4.81e-52 | 175 |
| MS.gene85316.t1 | AT4G00190 | 44.886 | 176 | 94 | 2 | 2 | 177 | 302 | 474 | 1.95e-50 | 169 |
| MS.gene85316.t1 | AT4G15980 | 46.552 | 174 | 92 | 1 | 2 | 175 | 528 | 700 | 1.09e-49 | 170 |
| MS.gene85316.t1 | AT4G15980 | 46.552 | 174 | 92 | 1 | 2 | 175 | 538 | 710 | 1.46e-49 | 170 |
| MS.gene85316.t1 | AT3G14300 | 45.562 | 169 | 84 | 3 | 2 | 167 | 796 | 959 | 8.88e-46 | 160 |
| MS.gene85316.t1 | AT5G20860 | 43.976 | 166 | 89 | 3 | 1 | 163 | 332 | 496 | 2.13e-43 | 151 |
| MS.gene85316.t1 | AT5G64640 | 38.919 | 185 | 89 | 5 | 1 | 170 | 427 | 602 | 2.62e-41 | 146 |
| MS.gene85316.t1 | AT5G09760 | 39.665 | 179 | 85 | 5 | 1 | 165 | 377 | 546 | 6.87e-40 | 142 |
| MS.gene85316.t1 | AT5G09760 | 39.665 | 179 | 85 | 5 | 1 | 165 | 403 | 572 | 9.20e-40 | 142 |
| MS.gene85316.t1 | AT2G47030 | 40.113 | 177 | 103 | 2 | 2 | 177 | 414 | 588 | 1.40e-39 | 141 |
| MS.gene85316.t1 | AT2G47040 | 41.243 | 177 | 101 | 2 | 2 | 177 | 421 | 595 | 3.72e-38 | 137 |
| MS.gene85316.t1 | AT3G62170 | 36.723 | 177 | 109 | 2 | 2 | 177 | 414 | 588 | 1.27e-35 | 130 |
| MS.gene85316.t1 | AT1G11370 | 50.943 | 106 | 52 | 0 | 2 | 107 | 181 | 286 | 1.26e-33 | 120 |
| MS.gene85316.t1 | AT2G36710 | 34.884 | 172 | 98 | 4 | 2 | 171 | 231 | 390 | 1.66e-29 | 112 |
| MS.gene85316.t1 | AT1G05310 | 34.706 | 170 | 94 | 4 | 2 | 166 | 231 | 388 | 3.02e-29 | 111 |
| MS.gene85316.t1 | AT3G24130 | 40.000 | 140 | 73 | 2 | 2 | 139 | 174 | 304 | 3.07e-28 | 107 |
| MS.gene85316.t1 | AT2G21610 | 35.976 | 164 | 90 | 4 | 3 | 166 | 189 | 337 | 1.05e-27 | 106 |
| MS.gene85316.t1 | AT2G21610 | 35.976 | 164 | 90 | 4 | 3 | 166 | 184 | 332 | 1.21e-27 | 106 |
| MS.gene85316.t1 | AT2G19150 | 34.857 | 175 | 99 | 4 | 2 | 173 | 177 | 339 | 8.59e-27 | 103 |
| MS.gene85316.t1 | AT3G17060 | 34.302 | 172 | 92 | 5 | 2 | 168 | 183 | 338 | 2.47e-26 | 102 |
| MS.gene85316.t1 | AT5G19730 | 32.121 | 165 | 97 | 4 | 2 | 166 | 232 | 381 | 7.11e-26 | 102 |
| MS.gene85316.t1 | AT5G18990 | 38.571 | 140 | 75 | 2 | 2 | 139 | 169 | 299 | 8.13e-26 | 101 |
| MS.gene85316.t1 | AT2G36700 | 35.152 | 165 | 94 | 4 | 2 | 166 | 182 | 333 | 2.71e-25 | 99.8 |
| MS.gene85316.t1 | AT5G26810 | 31.361 | 169 | 100 | 5 | 2 | 166 | 177 | 333 | 3.07e-24 | 97.1 |
| MS.gene85316.t1 | AT3G29090 | 31.875 | 160 | 95 | 4 | 2 | 161 | 152 | 297 | 7.42e-23 | 93.2 |
| MS.gene85316.t1 | AT5G47500 | 29.518 | 166 | 101 | 4 | 2 | 166 | 207 | 357 | 1.61e-22 | 92.8 |
| MS.gene85316.t1 | AT2G47280 | 32.738 | 168 | 98 | 3 | 2 | 166 | 172 | 327 | 1.72e-22 | 92.4 |
| MS.gene85316.t1 | AT5G07430 | 32.727 | 165 | 95 | 4 | 3 | 166 | 206 | 355 | 1.06e-21 | 90.5 |
| MS.gene85316.t1 | AT5G07420 | 33.735 | 166 | 92 | 5 | 3 | 166 | 206 | 355 | 1.81e-21 | 90.1 |
| MS.gene85316.t1 | AT5G61680 | 33.333 | 165 | 94 | 4 | 3 | 166 | 209 | 358 | 2.23e-21 | 89.7 |
| MS.gene85316.t1 | AT2G19150 | 38.938 | 113 | 57 | 3 | 2 | 111 | 177 | 280 | 3.57e-21 | 88.2 |
| MS.gene85316.t1 | AT5G55590 | 33.537 | 164 | 94 | 3 | 3 | 166 | 230 | 378 | 1.22e-20 | 87.8 |
| MS.gene85316.t1 | AT1G69940 | 29.697 | 165 | 100 | 4 | 3 | 166 | 206 | 355 | 1.20e-19 | 85.1 |
| MS.gene85316.t1 | AT5G55590 | 37.963 | 108 | 55 | 2 | 3 | 110 | 230 | 325 | 1.43e-19 | 84.3 |
| MS.gene85316.t1 | AT5G07410 | 30.303 | 165 | 99 | 5 | 3 | 166 | 206 | 355 | 2.94e-19 | 84.0 |
Find 39 sgRNAs with CRISPR-Local
Find 45 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGCTGAGTACATGAATTA+TGG | 0.221132 | 2.4:+45513035 | MS.gene85316:CDS |
| CAGCGGTAATGTTGCAGAAT+TGG | 0.316942 | 2.4:-45512851 | None:intergenic |
| AATTTATTGAGGGGAATCTA+TGG | 0.320153 | 2.4:+45513147 | MS.gene85316:CDS |
| GATTAAATAAAAGAGTTAAA+TGG | 0.348066 | 2.4:+45513069 | MS.gene85316:CDS |
| AATTCCACTTATACATATCT+TGG | 0.358083 | 2.4:+45512897 | MS.gene85316:CDS |
| TTCCACTCTAGCCACCCTTC+TGG | 0.377303 | 2.4:-45512984 | None:intergenic |
| GTAGCATTCACTGCTGGATT+AGG | 0.383549 | 2.4:+45513185 | MS.gene85316:CDS |
| ATGCTGAGTACATGAATTAT+GGG | 0.410016 | 2.4:+45513036 | MS.gene85316:CDS |
| TGATTCAGACCTTCTTCCTT+CGG | 0.412325 | 2.4:+45512872 | MS.gene85316:CDS |
| GAGAAACCAGTTGGTTCGTT+AGG | 0.419165 | 2.4:-45512825 | None:intergenic |
| AATCTATGGTTGCCCACAAC+AGG | 0.423059 | 2.4:+45513161 | MS.gene85316:CDS |
| GTTCTTGAATATTGCTTCCA+TGG | 0.429955 | 2.4:-45512924 | None:intergenic |
| ATGAATTATGGGTCTGGAGC+TGG | 0.430214 | 2.4:+45513047 | MS.gene85316:CDS |
| TACAGTGACACAATTTATTG+AGG | 0.451745 | 2.4:+45513136 | MS.gene85316:CDS |
| AATAAAAGAGTTAAATGGCC+AGG | 0.462025 | 2.4:+45513074 | MS.gene85316:CDS |
| AGAAACCAGTTGGTTCGTTA+GGG | 0.486073 | 2.4:-45512824 | None:intergenic |
| TTCAGAGAATGCAAAATAAG+TGG | 0.490025 | 2.4:+45512687 | MS.gene85316:CDS |
| TGGAATTAACCGAAGGAAGA+AGG | 0.514420 | 2.4:-45512881 | None:intergenic |
| AAAGACCCTAACGAACCAAC+TGG | 0.528989 | 2.4:+45512819 | MS.gene85316:CDS |
| GGCCAGAAGGGTGGCTAGAG+TGG | 0.530386 | 2.4:+45512982 | MS.gene85316:CDS |
| ACAGTGACACAATTTATTGA+GGG | 0.533042 | 2.4:+45513137 | MS.gene85316:CDS |
| GAGTACATGAATTATGGGTC+TGG | 0.534865 | 2.4:+45513041 | MS.gene85316:CDS |
| ACAGGTGTAGCATTCACTGC+TGG | 0.562002 | 2.4:+45513179 | MS.gene85316:CDS |
| CAGTGACACAATTTATTGAG+GGG | 0.568743 | 2.4:+45513138 | MS.gene85316:CDS |
| TCTTCCAAGATATGTATAAG+TGG | 0.580708 | 2.4:-45512901 | None:intergenic |
| ATAAAAGAGTTAAATGGCCA+GGG | 0.583592 | 2.4:+45513075 | MS.gene85316:CDS |
| GAAGGGTGGCTAGAGTGGAA+TGG | 0.595880 | 2.4:+45512987 | MS.gene85316:CDS |
| AGTGAATGCTACACCTGTTG+TGG | 0.597942 | 2.4:-45513174 | None:intergenic |
| AATTGGATCGAGAAACCAGT+TGG | 0.605177 | 2.4:-45512834 | None:intergenic |
| AAGAACACTATCACAGCTCA+CGG | 0.608273 | 2.4:+45512792 | MS.gene85316:CDS |
| TCATTCATTATGTGATACCC+TGG | 0.610003 | 2.4:-45513092 | None:intergenic |
| AGTGATGTGTTGAGGCCAGA+AGG | 0.614258 | 2.4:+45512969 | MS.gene85316:CDS |
| GTGAATGCTACACCTGTTGT+GGG | 0.624429 | 2.4:-45513173 | None:intergenic |
| CTCACATAAGTGATGTGTTG+AGG | 0.629032 | 2.4:+45512961 | MS.gene85316:CDS |
| AGGAAGAAGGTCTGAATCAG+CGG | 0.639949 | 2.4:-45512868 | None:intergenic |
| GTGATGTGTTGAGGCCAGAA+GGG | 0.653931 | 2.4:+45512970 | MS.gene85316:CDS |
| ATACATATCTTGGAAGACCA+TGG | 0.655553 | 2.4:+45512907 | MS.gene85316:CDS |
| GTATAAGTGGAATTAACCGA+AGG | 0.660435 | 2.4:-45512888 | None:intergenic |
| ATGTGTTGAGGCCAGAAGGG+TGG | 0.717629 | 2.4:+45512973 | MS.gene85316:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATTAAATAAAAGAGTTAAA+TGG | + | chr2.4:45513069-45513088 | MS.gene85316:CDS | 15.0% |
| !! | GTCAAATACTAGTAAAAAAA+GGG | + | chr2.4:45512757-45512776 | MS.gene85316:CDS | 20.0% |
| !! | TGTCAAATACTAGTAAAAAA+AGG | + | chr2.4:45512756-45512775 | MS.gene85316:CDS | 20.0% |
| ! | AATTCCACTTATACATATCT+TGG | + | chr2.4:45512897-45512916 | MS.gene85316:CDS | 25.0% |
| AATAAAAGAGTTAAATGGCC+AGG | + | chr2.4:45513074-45513093 | MS.gene85316:CDS | 30.0% | |
| AATTTATTGAGGGGAATCTA+TGG | + | chr2.4:45513147-45513166 | MS.gene85316:CDS | 30.0% | |
| ACAGTGACACAATTTATTGA+GGG | + | chr2.4:45513137-45513156 | MS.gene85316:CDS | 30.0% | |
| ATAAAAGAGTTAAATGGCCA+GGG | + | chr2.4:45513075-45513094 | MS.gene85316:CDS | 30.0% | |
| ATGCTGAGTACATGAATTAT+GGG | + | chr2.4:45513036-45513055 | MS.gene85316:CDS | 30.0% | |
| TACAGTGACACAATTTATTG+AGG | + | chr2.4:45513136-45513155 | MS.gene85316:CDS | 30.0% | |
| TATGCTGAGTACATGAATTA+TGG | + | chr2.4:45513035-45513054 | MS.gene85316:CDS | 30.0% | |
| TCTTCCAAGATATGTATAAG+TGG | - | chr2.4:45512904-45512923 | None:intergenic | 30.0% | |
| TTCAGAGAATGCAAAATAAG+TGG | + | chr2.4:45512687-45512706 | MS.gene85316:CDS | 30.0% | |
| !! | GTGATAGTGTTCTTTTGATT+TGG | - | chr2.4:45512786-45512805 | None:intergenic | 30.0% |
| ATACATATCTTGGAAGACCA+TGG | + | chr2.4:45512907-45512926 | MS.gene85316:CDS | 35.0% | |
| CAGTGACACAATTTATTGAG+GGG | + | chr2.4:45513138-45513157 | MS.gene85316:CDS | 35.0% | |
| GTATAAGTGGAATTAACCGA+AGG | - | chr2.4:45512891-45512910 | None:intergenic | 35.0% | |
| GTTCTTGAATATTGCTTCCA+TGG | - | chr2.4:45512927-45512946 | None:intergenic | 35.0% | |
| TCATTCATTATGTGATACCC+TGG | - | chr2.4:45513095-45513114 | None:intergenic | 35.0% | |
| !!! | ACAGTTTTGAAAAAGAGTCG+TGG | - | chr2.4:45512739-45512758 | None:intergenic | 35.0% |
| !!! | GGCACTGTCGATTTTATTTT+TGG | + | chr2.4:45512708-45512727 | MS.gene85316:CDS | 35.0% |
| AAGAACACTATCACAGCTCA+CGG | + | chr2.4:45512792-45512811 | MS.gene85316:CDS | 40.0% | |
| AATTGGATCGAGAAACCAGT+TGG | - | chr2.4:45512837-45512856 | None:intergenic | 40.0% | |
| CTCACATAAGTGATGTGTTG+AGG | + | chr2.4:45512961-45512980 | MS.gene85316:CDS | 40.0% | |
| GAGTACATGAATTATGGGTC+TGG | + | chr2.4:45513041-45513060 | MS.gene85316:CDS | 40.0% | |
| TGATTCAGACCTTCTTCCTT+CGG | + | chr2.4:45512872-45512891 | MS.gene85316:CDS | 40.0% | |
| TGGAATTAACCGAAGGAAGA+AGG | - | chr2.4:45512884-45512903 | None:intergenic | 40.0% | |
| ! | GTGGAATGGAGATTTTGCTT+TGG | + | chr2.4:45513001-45513020 | MS.gene85316:CDS | 40.0% |
| !! | AGAAACCAGTTGGTTCGTTA+GGG | - | chr2.4:45512827-45512846 | None:intergenic | 40.0% |
| AAAGACCCTAACGAACCAAC+TGG | + | chr2.4:45512819-45512838 | MS.gene85316:CDS | 45.0% | |
| AATCTATGGTTGCCCACAAC+AGG | + | chr2.4:45513161-45513180 | MS.gene85316:CDS | 45.0% | |
| AGGAAGAAGGTCTGAATCAG+CGG | - | chr2.4:45512871-45512890 | None:intergenic | 45.0% | |
| AGTGAATGCTACACCTGTTG+TGG | - | chr2.4:45513177-45513196 | None:intergenic | 45.0% | |
| CAGCGGTAATGTTGCAGAAT+TGG | - | chr2.4:45512854-45512873 | None:intergenic | 45.0% | |
| GTAGCATTCACTGCTGGATT+AGG | + | chr2.4:45513185-45513204 | MS.gene85316:CDS | 45.0% | |
| GTGAATGCTACACCTGTTGT+GGG | - | chr2.4:45513176-45513195 | None:intergenic | 45.0% | |
| ! | ATGAATTATGGGTCTGGAGC+TGG | + | chr2.4:45513047-45513066 | MS.gene85316:CDS | 45.0% |
| !! | GAGAAACCAGTTGGTTCGTT+AGG | - | chr2.4:45512828-45512847 | None:intergenic | 45.0% |
| ACAGGTGTAGCATTCACTGC+TGG | + | chr2.4:45513179-45513198 | MS.gene85316:CDS | 50.0% | |
| AGTGATGTGTTGAGGCCAGA+AGG | + | chr2.4:45512969-45512988 | MS.gene85316:CDS | 50.0% | |
| GTGATGTGTTGAGGCCAGAA+GGG | + | chr2.4:45512970-45512989 | MS.gene85316:CDS | 50.0% | |
| ATGTGTTGAGGCCAGAAGGG+TGG | + | chr2.4:45512973-45512992 | MS.gene85316:CDS | 55.0% | |
| GAAGGGTGGCTAGAGTGGAA+TGG | + | chr2.4:45512987-45513006 | MS.gene85316:CDS | 55.0% | |
| TTCCACTCTAGCCACCCTTC+TGG | - | chr2.4:45512987-45513006 | None:intergenic | 55.0% | |
| GGCCAGAAGGGTGGCTAGAG+TGG | + | chr2.4:45512982-45513001 | MS.gene85316:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 45512675 | 45513214 | 45512675 | ID=MS.gene85316 |
| chr2.4 | mRNA | 45512675 | 45513214 | 45512675 | ID=MS.gene85316.t1;Parent=MS.gene85316 |
| chr2.4 | exon | 45512675 | 45513214 | 45512675 | ID=MS.gene85316.t1.exon1;Parent=MS.gene85316.t1 |
| chr2.4 | CDS | 45512675 | 45513214 | 45512675 | ID=cds.MS.gene85316.t1;Parent=MS.gene85316.t1 |
| Gene Sequence |
| Protein sequence |
