Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88371.t1 | XP_003596480.1 | 93.2 | 103 | 7 | 0 | 1 | 103 | 1 | 103 | 1.60E-21 | 112.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88371.t1 | G7IR50 | 93.2 | 103 | 7 | 0 | 1 | 103 | 1 | 103 | 1.1e-21 | 112.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene88371 | 0.830989 | 2.15E-55 | -1.69E-46 |
| MS.gene050277 | MS.gene88371 | 0.878951 | 1.85E-69 | -1.69E-46 |
| MS.gene050303 | MS.gene88371 | 0.829931 | 3.90E-55 | -1.69E-46 |
| MS.gene050815 | MS.gene88371 | 0.843548 | 1.31E-58 | -1.69E-46 |
| MS.gene051063 | MS.gene88371 | 0.84064 | 7.70E-58 | -1.69E-46 |
| MS.gene051088 | MS.gene88371 | 0.812942 | 3.29E-51 | -1.69E-46 |
| MS.gene051241 | MS.gene88371 | 0.809137 | 2.19E-50 | -1.69E-46 |
| MS.gene051243 | MS.gene88371 | 0.822107 | 2.83E-53 | -1.69E-46 |
| MS.gene051245 | MS.gene88371 | 0.845836 | 3.17E-59 | -1.69E-46 |
| MS.gene051328 | MS.gene88371 | 0.825366 | 4.88E-54 | -1.69E-46 |
| MS.gene051330 | MS.gene88371 | 0.832 | 1.21E-55 | -1.69E-46 |
| MS.gene051349 | MS.gene88371 | 0.814238 | 1.71E-51 | -1.69E-46 |
| MS.gene05134 | MS.gene88371 | 0.845005 | 5.32E-59 | -1.69E-46 |
| MS.gene051633 | MS.gene88371 | 0.829016 | 6.52E-55 | -1.69E-46 |
| MS.gene051746 | MS.gene88371 | 0.830077 | 3.60E-55 | -1.69E-46 |
| MS.gene051748 | MS.gene88371 | 0.819634 | 1.05E-52 | -1.69E-46 |
| MS.gene051757 | MS.gene88371 | 0.808591 | 2.87E-50 | -1.69E-46 |
| MS.gene051903 | MS.gene88371 | 0.849099 | 4.02E-60 | -1.69E-46 |
| MS.gene052286 | MS.gene88371 | 0.840854 | 6.77E-58 | -1.69E-46 |
| MS.gene052302 | MS.gene88371 | 0.836339 | 9.91E-57 | -1.69E-46 |
| MS.gene052309 | MS.gene88371 | -0.802606 | 5.18E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene88371 | 0.837984 | 3.76E-57 | -1.69E-46 |
| MS.gene052947 | MS.gene88371 | 0.842453 | 2.56E-58 | -1.69E-46 |
| MS.gene053008 | MS.gene88371 | 0.801121 | 1.05E-48 | -1.69E-46 |
| MS.gene053109 | MS.gene88371 | 0.831011 | 2.13E-55 | -1.69E-46 |
| MS.gene055162 | MS.gene88371 | 0.820027 | 8.52E-53 | -1.69E-46 |
| MS.gene055174 | MS.gene88371 | 0.802325 | 5.92E-49 | -1.69E-46 |
| MS.gene055424 | MS.gene88371 | 0.808679 | 2.75E-50 | -1.69E-46 |
| MS.gene055441 | MS.gene88371 | 0.827746 | 1.32E-54 | -1.69E-46 |
| MS.gene055591 | MS.gene88371 | -0.80915 | 2.18E-50 | -1.69E-46 |
| MS.gene056432 | MS.gene88371 | 0.803036 | 4.22E-49 | -1.69E-46 |
| MS.gene056601 | MS.gene88371 | 0.843333 | 1.49E-58 | -1.69E-46 |
| MS.gene056631 | MS.gene88371 | 0.875519 | 2.89E-68 | -1.69E-46 |
| MS.gene056760 | MS.gene88371 | 0.842232 | 2.93E-58 | -1.69E-46 |
| MS.gene057057 | MS.gene88371 | 0.856805 | 2.51E-62 | -1.69E-46 |
| MS.gene057079 | MS.gene88371 | 0.81958 | 1.08E-52 | -1.69E-46 |
| MS.gene057094 | MS.gene88371 | 0.822473 | 2.32E-53 | -1.69E-46 |
| MS.gene057140 | MS.gene88371 | 0.868365 | 6.89E-66 | -1.69E-46 |
| MS.gene057234 | MS.gene88371 | 0.857956 | 1.15E-62 | -1.69E-46 |
| MS.gene057705 | MS.gene88371 | 0.812069 | 5.10E-51 | -1.69E-46 |
| MS.gene05795 | MS.gene88371 | 0.822625 | 2.14E-53 | -1.69E-46 |
| MS.gene058055 | MS.gene88371 | 0.826974 | 2.02E-54 | -1.69E-46 |
| MS.gene058182 | MS.gene88371 | 0.810423 | 1.16E-50 | -1.69E-46 |
| MS.gene058238 | MS.gene88371 | 0.842463 | 2.55E-58 | -1.69E-46 |
| MS.gene058906 | MS.gene88371 | 0.880197 | 6.69E-70 | -1.69E-46 |
| MS.gene059151 | MS.gene88371 | 0.805732 | 1.16E-49 | -1.69E-46 |
| MS.gene059249 | MS.gene88371 | 0.800964 | 1.13E-48 | -1.69E-46 |
| MS.gene059830 | MS.gene88371 | 0.81895 | 1.50E-52 | -1.69E-46 |
| MS.gene059898 | MS.gene88371 | 0.959988 | 4.72E-118 | -1.69E-46 |
| MS.gene06001 | MS.gene88371 | 0.867534 | 1.28E-65 | -1.69E-46 |
| MS.gene06011 | MS.gene88371 | 0.806984 | 6.31E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene88371 | 0.815939 | 7.15E-52 | -1.69E-46 |
| MS.gene060586 | MS.gene88371 | 0.834771 | 2.47E-56 | -1.69E-46 |
| MS.gene060917 | MS.gene88371 | 0.816358 | 5.76E-52 | -1.69E-46 |
| MS.gene061145 | MS.gene88371 | 0.81347 | 2.52E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88371.t1 | MTR_2g080990 | 97.087 | 103 | 3 | 0 | 1 | 103 | 1 | 103 | 6.75e-66 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 13 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCGGCAGACTTCTCATTTG+CGG | 0.410034 | 2.3:-17402619 | None:intergenic |
| GGAGCTAAAATCAAGGTTGC+TGG | 0.433275 | 2.3:+17400637 | MS.gene88371:CDS |
| GCAATGGATACATCAGAATC+AGG | 0.468029 | 2.3:+17400616 | MS.gene88371:intron |
| GAGTATACCTTGAGGTGCTT+CGG | 0.483494 | 2.3:-17400454 | None:intergenic |
| GTCGGTTATGTCCATCGAAA+CGG | 0.525995 | 2.3:-17400421 | None:intergenic |
| AACAGGAAGGTGAAGCAGAA+TGG | 0.552894 | 2.3:+17402537 | MS.gene88371:intron |
| TTCAGACTTGGAAACTTTCG+CGG | 0.568580 | 2.3:-17402637 | None:intergenic |
| AGAATCAGGAGCTAAAATCA+AGG | 0.594733 | 2.3:+17400630 | MS.gene88371:CDS |
| GGAAGGTGAAGCAGAATGGA+AGG | 0.604858 | 2.3:+17402541 | MS.gene88371:intron |
| ATCGTTTCCGAAGCACCTCA+AGG | 0.606213 | 2.3:+17400447 | MS.gene88371:CDS |
| GCTAAAATCAAGGTTGCTGG+TGG | 0.607057 | 2.3:+17400640 | MS.gene88371:CDS |
| TGCTTCGGAAACGATGGTGT+CGG | 0.636322 | 2.3:-17400439 | None:intergenic |
| TTGAGGTGCTTCGGAAACGA+TGG | 0.645225 | 2.3:-17400445 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATTATAATTTTTTAAAGA+AGG | + | chr2.3:17401519-17401538 | MS.gene88371:intron | 10.0% |
| !! | AAAAACAAGAAGAATAAAAA+CGG | + | chr2.3:17400396-17400415 | MS.gene88371:CDS | 15.0% |
| !! | AATAAAGAAAACTTACAAAA+TGG | - | chr2.3:17400671-17400690 | None:intergenic | 15.0% |
| !! | TTAAACCACAAAAAAAAAAA+AGG | - | chr2.3:17400570-17400589 | None:intergenic | 15.0% |
| !!! | ATTTTCCTTTTTTTTTTTTG+TGG | + | chr2.3:17400562-17400581 | MS.gene88371:intron | 15.0% |
| !!! | TTATAATTTTTTAAAGAAGG+CGG | + | chr2.3:17401522-17401541 | MS.gene88371:intron | 15.0% |
| !! | AAATCAAACTTATTGGATTA+AGG | - | chr2.3:17401004-17401023 | None:intergenic | 20.0% |
| !! | AATCAAACTTATTGGATTAA+GGG | - | chr2.3:17401003-17401022 | None:intergenic | 20.0% |
| !! | TTAATCCAATAAGTTTGATT+TGG | + | chr2.3:17401003-17401022 | MS.gene88371:intron | 20.0% |
| !! | TTGCATAATAATAGTTGTAT+GGG | + | chr2.3:17402198-17402217 | MS.gene88371:intron | 20.0% |
| !! | TTTGCATAATAATAGTTGTA+TGG | + | chr2.3:17402197-17402216 | MS.gene88371:intron | 20.0% |
| !!! | CATAAAGTTTTAAACAATGA+TGG | - | chr2.3:17402351-17402370 | None:intergenic | 20.0% |
| !!! | CATCATTGTTTAAAACTTTA+TGG | + | chr2.3:17402349-17402368 | MS.gene88371:intron | 20.0% |
| !!! | TTAATTTGTTTATCCAAACA+AGG | - | chr2.3:17400865-17400884 | None:intergenic | 20.0% |
| ! | AAATACCAACTTAGAATATG+AGG | - | chr2.3:17401112-17401131 | None:intergenic | 25.0% |
| ! | AATGATTGTTTGATAGAACA+AGG | + | chr2.3:17402012-17402031 | MS.gene88371:intron | 25.0% |
| ! | ACAGTTAACATATAACTCAT+AGG | - | chr2.3:17401925-17401944 | None:intergenic | 25.0% |
| ! | AGTCTATCAATAGGAAAATT+TGG | + | chr2.3:17402162-17402181 | MS.gene88371:intron | 25.0% |
| ! | TAGAGAATCACAAGTTAAAT+GGG | + | chr2.3:17400737-17400756 | MS.gene88371:intron | 25.0% |
| ! | TTCTATCAAACAATCATTCA+AGG | - | chr2.3:17402010-17402029 | None:intergenic | 25.0% |
| !! | AACCAAAGCATTAAAAAACT+AGG | - | chr2.3:17400794-17400813 | None:intergenic | 25.0% |
| !! | ACCAAAGCATTAAAAAACTA+GGG | - | chr2.3:17400793-17400812 | None:intergenic | 25.0% |
| !! | TATTATGTTTTGCAAGTAGA+TGG | - | chr2.3:17402424-17402443 | None:intergenic | 25.0% |
| !! | TTTAAAACATATATGTGCGT+AGG | - | chr2.3:17401557-17401576 | None:intergenic | 25.0% |
| !!! | AAAAAAGTGTCATCAAAATG+AGG | - | chr2.3:17401846-17401865 | None:intergenic | 25.0% |
| !!! | AAAAAGTGTCATCAAAATGA+GGG | - | chr2.3:17401845-17401864 | None:intergenic | 25.0% |
| !!! | ACTTTTTTTGTTTTCAGACT+TGG | - | chr2.3:17402652-17402671 | None:intergenic | 25.0% |
| !!! | TTTTTTAATGCTTTGGTTGA+TGG | + | chr2.3:17400796-17400815 | MS.gene88371:intron | 25.0% |
| AAAACTGATGAACAATTCAC+AGG | - | chr2.3:17402251-17402270 | None:intergenic | 30.0% | |
| AATATTCTATACTTTCGCAG+AGG | + | chr2.3:17402276-17402295 | MS.gene88371:intron | 30.0% | |
| ACTTAGAATATGAGGAGATA+TGG | - | chr2.3:17401104-17401123 | None:intergenic | 30.0% | |
| AGAGAATCACAAGTTAAATG+GGG | + | chr2.3:17400738-17400757 | MS.gene88371:intron | 30.0% | |
| AGCCAAATAGAGAGTTAAAT+AGG | + | chr2.3:17402069-17402088 | MS.gene88371:intron | 30.0% | |
| ATAACTGACAATAGTTAGCT+AGG | + | chr2.3:17402122-17402141 | MS.gene88371:intron | 30.0% | |
| ATATCAATCGAGTCTATGAT+AGG | + | chr2.3:17402042-17402061 | MS.gene88371:intron | 30.0% | |
| ATCACTTAACTGTGTGATAT+AGG | + | chr2.3:17401189-17401208 | MS.gene88371:intron | 30.0% | |
| ATCATAGACTCGATTGATAT+CGG | - | chr2.3:17402042-17402061 | None:intergenic | 30.0% | |
| ATTCAAGGCAAAAATTCTGA+TGG | - | chr2.3:17401995-17402014 | None:intergenic | 30.0% | |
| CATGTTATAATTGAGGACAT+TGG | - | chr2.3:17401957-17401976 | None:intergenic | 30.0% | |
| CCAAATAGAGAGTTAAATAG+GGG | + | chr2.3:17402071-17402090 | MS.gene88371:intron | 30.0% | |
| CTTACAAAATTGATCAGCAT+TGG | - | chr2.3:17401736-17401755 | None:intergenic | 30.0% | |
| CTTATTCATAACCACTCATA+TGG | - | chr2.3:17400901-17400920 | None:intergenic | 30.0% | |
| GAATACGAACAATTCACTAA+TGG | + | chr2.3:17401701-17401720 | MS.gene88371:intron | 30.0% | |
| GACGAAGGCTAAAAATATAA+GGG | - | chr2.3:17400695-17400714 | None:intergenic | 30.0% | |
| GCCAAATAGAGAGTTAAATA+GGG | + | chr2.3:17402070-17402089 | MS.gene88371:intron | 30.0% | |
| GTAGAGAATCACAAGTTAAA+TGG | + | chr2.3:17400736-17400755 | MS.gene88371:intron | 30.0% | |
| TATCTCCTCATATTCTAAGT+TGG | + | chr2.3:17401104-17401123 | MS.gene88371:intron | 30.0% | |
| TGTTCGTATTCTAATTACAC+AGG | - | chr2.3:17401692-17401711 | None:intergenic | 30.0% | |
| TTGCACCAAATCAAACTTAT+TGG | - | chr2.3:17401011-17401030 | None:intergenic | 30.0% | |
| ! | ATAGTAGTTGCCTTGTATTT+TGG | + | chr2.3:17401460-17401479 | MS.gene88371:intron | 30.0% |
| ! | ATTGGATGTTGTTGTTGAAT+TGG | + | chr2.3:17401061-17401080 | MS.gene88371:intron | 30.0% |
| ! | TAGTAGTTGCCTTGTATTTT+GGG | + | chr2.3:17401461-17401480 | MS.gene88371:intron | 30.0% |
| ! | TTGGATGTTGTTGTTGAATT+GGG | + | chr2.3:17401062-17401081 | MS.gene88371:intron | 30.0% |
| !! | AACACTTTTTGATCTCTTCA+TGG | - | chr2.3:17402568-17402587 | None:intergenic | 30.0% |
| !! | AATCACATTTACTTTTGCAC+TGG | + | chr2.3:17401330-17401349 | MS.gene88371:intron | 30.0% |
| !! | ACACTTTTTGATCTCTTCAT+GGG | - | chr2.3:17402567-17402586 | None:intergenic | 30.0% |
| !! | CTTTTGTTTATTTGCAGCAA+TGG | + | chr2.3:17400600-17400619 | MS.gene88371:intron | 30.0% |
| !! | TATTCTTTAAAGCATGCACT+TGG | + | chr2.3:17401410-17401429 | MS.gene88371:intron | 30.0% |
| !! | TGTATGGGATATTTGTTATC+AGG | + | chr2.3:17402213-17402232 | MS.gene88371:intron | 30.0% |
| !!! | ACCCTAGTTTTTTAATGCTT+TGG | + | chr2.3:17400789-17400808 | MS.gene88371:intron | 30.0% |
| !!! | GCAATGTAGTTTTTTTTGCA+TGG | + | chr2.3:17401288-17401307 | MS.gene88371:intron | 30.0% |
| AATCTCACATGTGAATATGC+TGG | + | chr2.3:17400935-17400954 | MS.gene88371:intron | 35.0% | |
| ACTGTGTGATATAGGAAATC+TGG | + | chr2.3:17401197-17401216 | MS.gene88371:intron | 35.0% | |
| AGAATCAGGAGCTAAAATCA+AGG | + | chr2.3:17400630-17400649 | MS.gene88371:CDS | 35.0% | |
| AGTCATCATTCTTTGTCGAA+CGG | + | chr2.3:17401161-17401180 | MS.gene88371:intron | 35.0% | |
| AGTTGAACGCAATTATAGGA+GGG | - | chr2.3:17401231-17401250 | None:intergenic | 35.0% | |
| ATCTGTTGAGTTCTTGAAGA+AGG | + | chr2.3:17401386-17401405 | MS.gene88371:intron | 35.0% | |
| CAAAGCAAACCCAAAATACA+AGG | - | chr2.3:17401473-17401492 | None:intergenic | 35.0% | |
| CCAATAATCAGTTGAGTAAC+TGG | - | chr2.3:17401046-17401065 | None:intergenic | 35.0% | |
| CCAGTTACTCAACTGATTAT+TGG | + | chr2.3:17401043-17401062 | MS.gene88371:intron | 35.0% | |
| CCATTGCTACAATGAAGAAA+TGG | - | chr2.3:17401269-17401288 | None:intergenic | 35.0% | |
| CCATTTCTTCATTGTAGCAA+TGG | + | chr2.3:17401266-17401285 | MS.gene88371:intron | 35.0% | |
| CCCCTATTTAACTCTCTATT+TGG | - | chr2.3:17402074-17402093 | None:intergenic | 35.0% | |
| CGACGAAGGCTAAAAATATA+AGG | - | chr2.3:17400696-17400715 | None:intergenic | 35.0% | |
| CTGTGTGATATAGGAAATCT+GGG | + | chr2.3:17401198-17401217 | MS.gene88371:intron | 35.0% | |
| GCAACGATTTGAGAAAATGT+TGG | - | chr2.3:17400834-17400853 | None:intergenic | 35.0% | |
| GTACAGTTGAACGCAATTAT+AGG | - | chr2.3:17401235-17401254 | None:intergenic | 35.0% | |
| TAATCAGTTGAGTAACTGGA+CGG | - | chr2.3:17401042-17401061 | None:intergenic | 35.0% | |
| TCATAGACTCGATTGATATC+GGG | - | chr2.3:17402041-17402060 | None:intergenic | 35.0% | |
| TCGCGAAGTATATTACAGAA+GGG | - | chr2.3:17402308-17402327 | None:intergenic | 35.0% | |
| TCTGTTGAGTTCTTGAAGAA+GGG | + | chr2.3:17401387-17401406 | MS.gene88371:intron | 35.0% | |
| TTACACAGGCAATTTAGTGA+TGG | - | chr2.3:17401678-17401697 | None:intergenic | 35.0% | |
| TTCTCAAATCGTTGCAATTC+AGG | + | chr2.3:17400839-17400858 | MS.gene88371:intron | 35.0% | |
| TTGCTCTTCTGTTTAGTCAT+GGG | + | chr2.3:17401895-17401914 | MS.gene88371:intron | 35.0% | |
| TTTGCAAGTAGATGGAAATC+AGG | - | chr2.3:17402416-17402435 | None:intergenic | 35.0% | |
| TTTGCTCTTCTGTTTAGTCA+TGG | + | chr2.3:17401894-17401913 | MS.gene88371:intron | 35.0% | |
| ! | ATAATGTTTTCTGCTCTGCT+GGG | - | chr2.3:17401651-17401670 | None:intergenic | 35.0% |
| !! | TTACTTTTGCACTGGATGTT+AGG | + | chr2.3:17401338-17401357 | MS.gene88371:intron | 35.0% |
| AAGTTAAATGGGGTTTAGCG+CGG | + | chr2.3:17400748-17400767 | MS.gene88371:intron | 40.0% | |
| ACTGATGAACAATTCACAGG+AGG | - | chr2.3:17402248-17402267 | None:intergenic | 40.0% | |
| AGTTAGCTAGGAAGAGTAGA+TGG | + | chr2.3:17402134-17402153 | MS.gene88371:intron | 40.0% | |
| AGTTCAGTTCGCATAGTTGA+TGG | + | chr2.3:17401791-17401810 | MS.gene88371:intron | 40.0% | |
| ATGGATGGGAGTCTATCAAT+AGG | + | chr2.3:17402153-17402172 | MS.gene88371:intron | 40.0% | |
| CAGTTGAACGCAATTATAGG+AGG | - | chr2.3:17401232-17401251 | None:intergenic | 40.0% | |
| CTCGCGAAGTATATTACAGA+AGG | - | chr2.3:17402309-17402328 | None:intergenic | 40.0% | |
| GCAATGGATACATCAGAATC+AGG | + | chr2.3:17400616-17400635 | MS.gene88371:intron | 40.0% | |
| GTGTTTACTCCACGACATAT+TGG | - | chr2.3:17402380-17402399 | None:intergenic | 40.0% | |
| TCACATGTGAATATGCTGGT+AGG | + | chr2.3:17400939-17400958 | MS.gene88371:intron | 40.0% | |
| TCCAGCGCATGTTATAATTG+AGG | - | chr2.3:17401964-17401983 | None:intergenic | 40.0% | |
| TCCTCAATTATAACATGCGC+TGG | + | chr2.3:17401960-17401979 | MS.gene88371:intron | 40.0% | |
| TGAAAAGCGAGTATACCTTG+AGG | - | chr2.3:17400465-17400484 | None:intergenic | 40.0% | |
| TTCAGACTTGGAAACTTTCG+CGG | - | chr2.3:17402640-17402659 | None:intergenic | 40.0% | |
| ! | GATAATGTTTTCTGCTCTGC+TGG | - | chr2.3:17401652-17401671 | None:intergenic | 40.0% |
| !! | TGGATGTTAGGTTCTAGACT+TGG | + | chr2.3:17401350-17401369 | MS.gene88371:intron | 40.0% |
| AACAATTCACAGGAGGTTCG+AGG | - | chr2.3:17402241-17402260 | None:intergenic | 45.0% | |
| AACAGGAAGGTGAAGCAGAA+TGG | + | chr2.3:17402537-17402556 | MS.gene88371:intron | 45.0% | |
| ACGCAATTATAGGAGGGAAG+AGG | - | chr2.3:17401225-17401244 | None:intergenic | 45.0% | |
| AGCTAGGAAGAGTAGATGGA+TGG | + | chr2.3:17402138-17402157 | MS.gene88371:intron | 45.0% | |
| CGCAATTATAGGAGGGAAGA+GGG | - | chr2.3:17401224-17401243 | None:intergenic | 45.0% | |
| GCTAAAATCAAGGTTGCTGG+TGG | + | chr2.3:17400640-17400659 | MS.gene88371:CDS | 45.0% | |
| GCTAGGAAGAGTAGATGGAT+GGG | + | chr2.3:17402139-17402158 | MS.gene88371:intron | 45.0% | |
| GGAGCTAAAATCAAGGTTGC+TGG | + | chr2.3:17400637-17400656 | MS.gene88371:CDS | 45.0% | |
| GTAGATGGAAATCAGGAAGC+AGG | - | chr2.3:17402409-17402428 | None:intergenic | 45.0% | |
| GTCGGTTATGTCCATCGAAA+CGG | - | chr2.3:17400424-17400443 | None:intergenic | 45.0% | |
| TGCAGCTTCTACCATATGAG+TGG | + | chr2.3:17400887-17400906 | MS.gene88371:intron | 45.0% | |
| ! | ATTATCAAGCATCGCGACGA+AGG | - | chr2.3:17400710-17400729 | None:intergenic | 45.0% |
| ! | GAGTATACCTTGAGGTGCTT+CGG | - | chr2.3:17400457-17400476 | None:intergenic | 45.0% |
| !! | GTTGCAATTCAGGCCTTGTT+TGG | + | chr2.3:17400849-17400868 | MS.gene88371:intron | 45.0% |
| !! | TAAAAACGGTGCCGTTTCGA+TGG | + | chr2.3:17400410-17400429 | MS.gene88371:CDS | 45.0% |
| !!! | GCATGCTTTTGCTCTGAAAC+AGG | + | chr2.3:17402520-17402539 | MS.gene88371:intron | 45.0% |
| !!! | GCTTTTGCTCTGAAACAGGA+AGG | + | chr2.3:17402524-17402543 | MS.gene88371:intron | 45.0% |
| ATGGTGCGTCCAATATGTCG+TGG | + | chr2.3:17402368-17402387 | MS.gene88371:intron | 50.0% | |
| GGAAGGTGAAGCAGAATGGA+AGG | + | chr2.3:17402541-17402560 | MS.gene88371:intron | 50.0% | |
| TGCTTCGGAAACGATGGTGT+CGG | - | chr2.3:17400442-17400461 | None:intergenic | 50.0% | |
| ! | ATCGTTTCCGAAGCACCTCA+AGG | + | chr2.3:17400447-17400466 | MS.gene88371:CDS | 50.0% |
| ! | TTGAGGTGCTTCGGAAACGA+TGG | - | chr2.3:17400448-17400467 | None:intergenic | 50.0% |
| !! | ACTTGGTGCACTGCAAGATG+TGG | + | chr2.3:17401427-17401446 | MS.gene88371:intron | 50.0% |
| CGCGGCAGACTTCTCATTTG+CGG | - | chr2.3:17402622-17402641 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 17400378 | 17402704 | 17400378 | ID=MS.gene88371 |
| chr2.3 | mRNA | 17400378 | 17402704 | 17400378 | ID=MS.gene88371.t1;Parent=MS.gene88371 |
| chr2.3 | exon | 17400378 | 17400468 | 17400378 | ID=MS.gene88371.t1.exon1;Parent=MS.gene88371.t1 |
| chr2.3 | CDS | 17400378 | 17400468 | 17400378 | ID=cds.MS.gene88371.t1;Parent=MS.gene88371.t1 |
| chr2.3 | exon | 17400617 | 17400674 | 17400617 | ID=MS.gene88371.t1.exon2;Parent=MS.gene88371.t1 |
| chr2.3 | CDS | 17400617 | 17400674 | 17400617 | ID=cds.MS.gene88371.t1;Parent=MS.gene88371.t1 |
| chr2.3 | exon | 17402542 | 17402704 | 17402542 | ID=MS.gene88371.t1.exon3;Parent=MS.gene88371.t1 |
| chr2.3 | CDS | 17402542 | 17402704 | 17402542 | ID=cds.MS.gene88371.t1;Parent=MS.gene88371.t1 |
| Gene Sequence |
| Protein sequence |
