Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89154.t1 | XP_013444469.1 | 100 | 617 | 0 | 0 | 1 | 617 | 1 | 617 | 0.00E+00 | 1205.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89154.t1 | Q9LZD3 | 37.1 | 585 | 314 | 9 | 41 | 613 | 96 | 638 | 4.6e-101 | 370.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89154.t1 | A0A072TLW3 | 100.0 | 617 | 0 | 0 | 1 | 617 | 1 | 617 | 0.0e+00 | 1205.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049254 | MS.gene89154 | 0.807252 | 5.54E-50 | -1.69E-46 |
MS.gene049283 | MS.gene89154 | 0.857297 | 1.80E-62 | -1.69E-46 |
MS.gene049499 | MS.gene89154 | 0.81858 | 1.82E-52 | -1.69E-46 |
MS.gene049983 | MS.gene89154 | 0.804581 | 2.02E-49 | -1.69E-46 |
MS.gene050414 | MS.gene89154 | 0.864635 | 1.06E-64 | -1.69E-46 |
MS.gene050559 | MS.gene89154 | 0.831067 | 2.06E-55 | -1.69E-46 |
MS.gene050561 | MS.gene89154 | 0.821188 | 4.61E-53 | -1.69E-46 |
MS.gene050562 | MS.gene89154 | 0.832209 | 1.08E-55 | -1.69E-46 |
MS.gene050646 | MS.gene89154 | 0.807844 | 4.14E-50 | -1.69E-46 |
MS.gene050945 | MS.gene89154 | 0.820116 | 8.13E-53 | -1.69E-46 |
MS.gene051279 | MS.gene89154 | 0.836513 | 8.95E-57 | -1.69E-46 |
MS.gene051699 | MS.gene89154 | 0.845289 | 4.46E-59 | -1.69E-46 |
MS.gene052016 | MS.gene89154 | 0.830801 | 2.39E-55 | -1.69E-46 |
MS.gene052037 | MS.gene89154 | 0.807621 | 4.62E-50 | -1.69E-46 |
MS.gene052239 | MS.gene89154 | -0.819369 | 1.20E-52 | -1.69E-46 |
MS.gene052463 | MS.gene89154 | 0.81097 | 8.85E-51 | -1.69E-46 |
MS.gene052533 | MS.gene89154 | 0.830884 | 2.28E-55 | -1.69E-46 |
MS.gene052534 | MS.gene89154 | 0.82372 | 1.19E-53 | -1.69E-46 |
MS.gene052674 | MS.gene89154 | 0.803115 | 4.07E-49 | -1.69E-46 |
MS.gene052675 | MS.gene89154 | 0.806392 | 8.41E-50 | -1.69E-46 |
MS.gene052677 | MS.gene89154 | 0.803553 | 3.30E-49 | -1.69E-46 |
MS.gene053272 | MS.gene89154 | -0.807627 | 4.61E-50 | -1.69E-46 |
MS.gene053963 | MS.gene89154 | 0.803503 | 3.38E-49 | -1.69E-46 |
MS.gene054222 | MS.gene89154 | 0.841252 | 5.32E-58 | -1.69E-46 |
MS.gene054489 | MS.gene89154 | 0.820299 | 7.38E-53 | -1.69E-46 |
MS.gene054576 | MS.gene89154 | 0.800671 | 1.29E-48 | -1.69E-46 |
MS.gene054641 | MS.gene89154 | 0.834342 | 3.17E-56 | -1.69E-46 |
MS.gene054892 | MS.gene89154 | 0.853655 | 2.07E-61 | -1.69E-46 |
MS.gene054893 | MS.gene89154 | 0.854825 | 9.51E-62 | -1.69E-46 |
MS.gene054957 | MS.gene89154 | 0.817907 | 2.58E-52 | -1.69E-46 |
MS.gene055229 | MS.gene89154 | 0.816001 | 6.92E-52 | -1.69E-46 |
MS.gene055386 | MS.gene89154 | 0.810247 | 1.27E-50 | -1.69E-46 |
MS.gene05539 | MS.gene89154 | 0.827761 | 1.31E-54 | -1.69E-46 |
MS.gene055724 | MS.gene89154 | 0.825271 | 5.13E-54 | -1.69E-46 |
MS.gene056272 | MS.gene89154 | 0.806612 | 7.56E-50 | -1.69E-46 |
MS.gene056363 | MS.gene89154 | 0.822122 | 2.80E-53 | -1.69E-46 |
MS.gene056677 | MS.gene89154 | 0.808944 | 2.41E-50 | -1.69E-46 |
MS.gene05686 | MS.gene89154 | 0.8336 | 4.86E-56 | -1.69E-46 |
MS.gene056973 | MS.gene89154 | 0.820626 | 6.21E-53 | -1.69E-46 |
MS.gene057102 | MS.gene89154 | 0.800808 | 1.21E-48 | -1.69E-46 |
MS.gene057174 | MS.gene89154 | 0.827503 | 1.51E-54 | -1.69E-46 |
MS.gene057208 | MS.gene89154 | 0.816419 | 5.58E-52 | -1.69E-46 |
MS.gene057919 | MS.gene89154 | 0.806616 | 7.54E-50 | -1.69E-46 |
MS.gene058159 | MS.gene89154 | 0.851796 | 7.03E-61 | -1.69E-46 |
MS.gene058279 | MS.gene89154 | 0.83386 | 4.18E-56 | -1.69E-46 |
MS.gene05952 | MS.gene89154 | 0.848571 | 5.63E-60 | -1.69E-46 |
MS.gene059621 | MS.gene89154 | 0.810465 | 1.14E-50 | -1.69E-46 |
MS.gene05985 | MS.gene89154 | -0.815073 | 1.11E-51 | -1.69E-46 |
MS.gene060522 | MS.gene89154 | 0.800151 | 1.65E-48 | -1.69E-46 |
MS.gene06052 | MS.gene89154 | 0.801463 | 8.90E-49 | -1.69E-46 |
MS.gene060777 | MS.gene89154 | 0.828639 | 8.04E-55 | -1.69E-46 |
MS.gene060932 | MS.gene89154 | 0.824263 | 8.88E-54 | -1.69E-46 |
MS.gene060933 | MS.gene89154 | 0.839208 | 1.82E-57 | -1.69E-46 |
MS.gene060935 | MS.gene89154 | 0.809612 | 1.74E-50 | -1.69E-46 |
MS.gene060937 | MS.gene89154 | 0.827369 | 1.62E-54 | -1.69E-46 |
MS.gene061100 | MS.gene89154 | 0.825277 | 5.12E-54 | -1.69E-46 |
MS.gene061160 | MS.gene89154 | 0.817217 | 3.70E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89154.t1 | MTR_8g021330 | 100.000 | 617 | 0 | 0 | 1 | 617 | 1 | 617 | 0.0 | 1267 |
MS.gene89154.t1 | MTR_4g103540 | 40.415 | 626 | 324 | 14 | 9 | 616 | 98 | 692 | 3.63e-149 | 447 |
MS.gene89154.t1 | MTR_7g013770 | 39.638 | 608 | 313 | 15 | 13 | 605 | 98 | 666 | 5.25e-132 | 402 |
MS.gene89154.t1 | MTR_1g090620 | 36.532 | 594 | 315 | 9 | 41 | 613 | 97 | 649 | 4.60e-127 | 389 |
MS.gene89154.t1 | MTR_5g073450 | 38.302 | 577 | 320 | 11 | 46 | 616 | 98 | 644 | 1.15e-126 | 387 |
MS.gene89154.t1 | MTR_1g057560 | 35.237 | 613 | 340 | 9 | 9 | 613 | 70 | 633 | 3.43e-120 | 370 |
MS.gene89154.t1 | MTR_3g031130 | 39.693 | 456 | 255 | 6 | 161 | 614 | 191 | 628 | 7.74e-112 | 348 |
MS.gene89154.t1 | MTR_6g033310 | 39.648 | 454 | 263 | 4 | 167 | 615 | 288 | 735 | 5.64e-110 | 347 |
MS.gene89154.t1 | MTR_2g096230 | 33.884 | 605 | 331 | 12 | 9 | 605 | 38 | 581 | 8.91e-109 | 339 |
MS.gene89154.t1 | MTR_7g026630 | 34.555 | 573 | 328 | 11 | 48 | 615 | 130 | 660 | 1.19e-108 | 341 |
MS.gene89154.t1 | MTR_1g117090 | 35.082 | 610 | 327 | 14 | 44 | 616 | 101 | 678 | 4.65e-108 | 340 |
MS.gene89154.t1 | MTR_3g025900 | 36.696 | 575 | 316 | 12 | 46 | 611 | 79 | 614 | 9.67e-107 | 335 |
MS.gene89154.t1 | MTR_5g073460 | 37.444 | 446 | 267 | 6 | 161 | 605 | 258 | 692 | 4.36e-99 | 317 |
MS.gene89154.t1 | MTR_1g067460 | 32.566 | 608 | 349 | 12 | 9 | 603 | 40 | 599 | 2.24e-96 | 308 |
MS.gene89154.t1 | MTR_1g067480 | 33.170 | 612 | 339 | 16 | 9 | 603 | 42 | 600 | 4.69e-96 | 306 |
MS.gene89154.t1 | MTR_4g062330 | 32.258 | 589 | 352 | 13 | 11 | 589 | 44 | 595 | 7.60e-95 | 304 |
MS.gene89154.t1 | MTR_5g073480 | 29.385 | 439 | 228 | 8 | 161 | 594 | 259 | 620 | 2.09e-57 | 204 |
MS.gene89154.t1 | MTR_5g074130 | 29.176 | 449 | 286 | 12 | 161 | 603 | 251 | 673 | 6.64e-57 | 205 |
MS.gene89154.t1 | MTR_5g073620 | 34.821 | 336 | 190 | 6 | 161 | 494 | 287 | 595 | 1.33e-49 | 186 |
MS.gene89154.t1 | MTR_5g073620 | 33.333 | 177 | 112 | 3 | 429 | 605 | 898 | 1068 | 1.81e-20 | 96.7 |
MS.gene89154.t1 | MTR_5g073920 | 27.753 | 454 | 290 | 10 | 160 | 609 | 244 | 663 | 9.76e-45 | 170 |
MS.gene89154.t1 | MTR_1g009620 | 25.235 | 531 | 368 | 10 | 98 | 617 | 153 | 665 | 2.13e-43 | 166 |
MS.gene89154.t1 | MTR_3g464010 | 27.617 | 449 | 287 | 11 | 162 | 603 | 249 | 666 | 3.32e-43 | 165 |
MS.gene89154.t1 | MTR_1g017910 | 27.209 | 430 | 284 | 13 | 172 | 584 | 251 | 668 | 2.10e-36 | 145 |
MS.gene89154.t1 | MTR_5g093530 | 26.954 | 371 | 223 | 9 | 235 | 603 | 246 | 570 | 7.71e-35 | 139 |
MS.gene89154.t1 | MTR_4g008260 | 24.664 | 446 | 305 | 8 | 165 | 604 | 220 | 640 | 2.77e-33 | 135 |
MS.gene89154.t1 | MTR_5g073900 | 26.065 | 399 | 231 | 11 | 179 | 571 | 1 | 341 | 1.11e-30 | 123 |
MS.gene89154.t1 | MTR_5g073770 | 36.364 | 176 | 109 | 2 | 161 | 334 | 200 | 374 | 2.05e-26 | 112 |
MS.gene89154.t1 | MTR_5g073490 | 33.939 | 165 | 89 | 4 | 440 | 604 | 9 | 153 | 2.24e-22 | 94.4 |
MS.gene89154.t1 | MTR_5g073780 | 33.526 | 173 | 107 | 4 | 434 | 605 | 58 | 223 | 5.16e-22 | 95.5 |
MS.gene89154.t1 | MTR_5g073960 | 32.402 | 179 | 107 | 3 | 161 | 338 | 250 | 415 | 1.89e-20 | 94.7 |
MS.gene89154.t1 | MTR_0229s0040 | 27.461 | 193 | 136 | 3 | 426 | 617 | 31 | 220 | 1.31e-18 | 85.9 |
MS.gene89154.t1 | MTR_2g041650 | 24.887 | 221 | 155 | 4 | 172 | 385 | 224 | 440 | 1.57e-12 | 70.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89154.t1 | AT1G72470 | 69.712 | 624 | 161 | 8 | 9 | 617 | 23 | 633 | 0.0 | 842 |
MS.gene89154.t1 | AT3G14090 | 65.512 | 635 | 187 | 5 | 1 | 615 | 1 | 623 | 0.0 | 783 |
MS.gene89154.t1 | AT1G54090 | 63.950 | 638 | 188 | 7 | 1 | 614 | 1 | 620 | 0.0 | 771 |
MS.gene89154.t1 | AT5G50380 | 42.947 | 638 | 300 | 16 | 9 | 616 | 80 | 683 | 1.55e-150 | 450 |
MS.gene89154.t1 | AT5G52340 | 36.317 | 581 | 317 | 9 | 41 | 613 | 96 | 631 | 4.34e-121 | 373 |
MS.gene89154.t1 | AT3G29400 | 38.591 | 596 | 326 | 11 | 24 | 605 | 78 | 647 | 4.65e-119 | 368 |
MS.gene89154.t1 | AT5G03540 | 41.575 | 457 | 242 | 5 | 163 | 613 | 86 | 523 | 7.98e-117 | 358 |
MS.gene89154.t1 | AT5G03540 | 41.575 | 457 | 242 | 5 | 163 | 613 | 201 | 638 | 1.61e-115 | 358 |
MS.gene89154.t1 | AT5G03540 | 41.575 | 457 | 242 | 5 | 163 | 613 | 227 | 664 | 7.05e-115 | 357 |
MS.gene89154.t1 | AT5G58430 | 35.243 | 576 | 308 | 11 | 46 | 605 | 92 | 618 | 2.96e-112 | 350 |
MS.gene89154.t1 | AT5G13150 | 38.998 | 459 | 263 | 6 | 162 | 614 | 206 | 653 | 6.45e-111 | 347 |
MS.gene89154.t1 | AT5G13990 | 35.605 | 587 | 331 | 9 | 41 | 616 | 145 | 695 | 3.33e-107 | 338 |
MS.gene89154.t1 | AT2G39380 | 33.167 | 603 | 363 | 10 | 9 | 607 | 46 | 612 | 5.82e-105 | 331 |
MS.gene89154.t1 | AT1G07000 | 32.981 | 567 | 310 | 11 | 46 | 604 | 91 | 595 | 4.03e-99 | 315 |
MS.gene89154.t1 | AT3G55150 | 31.086 | 608 | 371 | 10 | 9 | 608 | 46 | 613 | 3.99e-97 | 310 |
MS.gene89154.t1 | AT3G09520 | 31.631 | 607 | 358 | 11 | 9 | 603 | 43 | 604 | 4.32e-95 | 305 |
MS.gene89154.t1 | AT5G52350 | 35.892 | 443 | 264 | 4 | 163 | 605 | 155 | 577 | 5.60e-93 | 298 |
MS.gene89154.t1 | AT2G28640 | 31.542 | 577 | 328 | 14 | 37 | 605 | 61 | 578 | 2.06e-91 | 295 |
MS.gene89154.t1 | AT1G07725 | 34.061 | 458 | 258 | 10 | 166 | 610 | 174 | 600 | 2.50e-90 | 292 |
MS.gene89154.t1 | AT5G59730 | 35.255 | 451 | 265 | 9 | 166 | 605 | 164 | 598 | 6.17e-90 | 291 |
MS.gene89154.t1 | AT5G59730 | 35.255 | 451 | 265 | 9 | 166 | 605 | 164 | 598 | 9.26e-90 | 291 |
MS.gene89154.t1 | AT5G61010 | 30.743 | 579 | 342 | 12 | 42 | 607 | 96 | 628 | 4.28e-88 | 287 |
MS.gene89154.t1 | AT5G61010 | 30.743 | 579 | 342 | 12 | 42 | 607 | 96 | 628 | 4.28e-88 | 287 |
MS.gene89154.t1 | AT3G09530 | 29.919 | 615 | 379 | 14 | 6 | 610 | 35 | 607 | 1.54e-80 | 267 |
MS.gene89154.t1 | AT2G28650 | 35.765 | 425 | 240 | 7 | 172 | 590 | 152 | 549 | 2.99e-72 | 243 |
MS.gene89154.t1 | AT4G31540 | 25.620 | 484 | 338 | 8 | 129 | 608 | 194 | 659 | 8.74e-45 | 170 |
MS.gene89154.t1 | AT1G51640 | 23.214 | 448 | 302 | 11 | 158 | 594 | 185 | 601 | 5.34e-24 | 107 |
Find 151 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTCTAAGGTTCCTGTTCC+TGG | 0.211046 | 8.1:+78067900 | MS.gene89154:CDS |
TGTATGAGCTTATAGTTTCT+AGG | 0.246738 | 8.1:+78067994 | MS.gene89154:CDS |
TTCGACGGGTTCGAGGTATT+CGG | 0.249759 | 8.1:+78068019 | MS.gene89154:CDS |
CTTTGGCTATTCATTTGATT+TGG | 0.255742 | 8.1:+78068093 | MS.gene89154:CDS |
CGTGAATGTATTCAAGTTTA+CGG | 0.260894 | 8.1:+78067396 | MS.gene89154:CDS |
CGCGGTTGGCTGAGGCTGCC+AGG | 0.270656 | 8.1:+78067838 | MS.gene89154:CDS |
CTTCAAGAGAAGGATCAATT+TGG | 0.271921 | 8.1:-78067125 | None:intergenic |
TGATCTTCATGATGCTTTGA+TGG | 0.286103 | 8.1:+78067737 | MS.gene89154:CDS |
TCGACGGGTTCGAGGTATTC+GGG | 0.288964 | 8.1:+78068020 | MS.gene89154:CDS |
AGATCTGGAGGACGCTGTTT+TGG | 0.301118 | 8.1:+78068619 | MS.gene89154:CDS |
CTGGATGGTGGAGGAGGGTT+TGG | 0.302849 | 8.1:-78067043 | None:intergenic |
CTAAGTCGTCTGAATCCATT+AGG | 0.304582 | 8.1:+78067793 | MS.gene89154:CDS |
GGAGAGGGAGGTGGAGGATA+TGG | 0.306258 | 8.1:-78067007 | None:intergenic |
TGGAGGAGGGTTTGGATGGG+TGG | 0.315708 | 8.1:-78067035 | None:intergenic |
ATCGATTTCGTCGCGGTTTG+TGG | 0.315802 | 8.1:-78066950 | None:intergenic |
TGTTCTTAAGGAGCCTTCTA+AGG | 0.322576 | 8.1:+78067887 | MS.gene89154:CDS |
AGTTCATCAAATTCCATATC+AGG | 0.322962 | 8.1:-78068056 | None:intergenic |
GATCATTCCTTGGTCGGTTC+AGG | 0.328632 | 8.1:+78068543 | MS.gene89154:CDS |
CTTCTCGTGTGCTGCGAAAC+AGG | 0.330201 | 8.1:-78068659 | None:intergenic |
ACCGATCATTTCCCTCAATT+CGG | 0.330878 | 8.1:-78068237 | None:intergenic |
ATTTGAAAATGCTGTTCTTA+AGG | 0.332951 | 8.1:+78067875 | MS.gene89154:CDS |
ATATTGCAATTCAATTTAGA+TGG | 0.340021 | 8.1:+78068125 | MS.gene89154:CDS |
GGGTTTGGATGGGTGGTTAT+CGG | 0.345180 | 8.1:-78067028 | None:intergenic |
GGATCCTTCGACTCCTGATA+TGG | 0.349000 | 8.1:+78068043 | MS.gene89154:CDS |
GATGCCTTCCGCTCTCTATA+TGG | 0.353255 | 8.1:-78068568 | None:intergenic |
GATTATTTGAAGAAGTTAAC+CGG | 0.361629 | 8.1:+78068263 | MS.gene89154:CDS |
CTCAGCCGCCTGAACCCTAA+TGG | 0.371590 | 8.1:-78067808 | None:intergenic |
TAAGTATTCTGTTGAAGATC+TGG | 0.382730 | 8.1:+78068604 | MS.gene89154:CDS |
GTGGTTATCGGAGAGGGAGG+TGG | 0.385268 | 8.1:-78067016 | None:intergenic |
GTCTGAATCCATTAGGGTTC+AGG | 0.389100 | 8.1:+78067800 | MS.gene89154:CDS |
CCGATCATTTCCCTCAATTC+GGG | 0.393033 | 8.1:-78068236 | None:intergenic |
TTAGGGTCTTGTATTGTTTG+AGG | 0.395175 | 8.1:+78068330 | MS.gene89154:CDS |
ATCAGAGAGCAACTTGGGTT+AGG | 0.396008 | 8.1:+78068312 | MS.gene89154:CDS |
CCAGGAACAGGAACCTTAGA+AGG | 0.396965 | 8.1:-78067900 | None:intergenic |
TATATTGTTCAAAAGGTTAG+AGG | 0.398981 | 8.1:+78068209 | MS.gene89154:CDS |
GGCGATCTGGATGGTGGAGG+AGG | 0.402892 | 8.1:-78067049 | None:intergenic |
TAGGGTCTTGTATTGTTTGA+GGG | 0.403053 | 8.1:+78068331 | MS.gene89154:CDS |
TCCTCCCTAAGTTGCGAATC+CGG | 0.409408 | 8.1:-78068479 | None:intergenic |
TTGTATTGTTTGAGGGATGA+AGG | 0.412213 | 8.1:+78068338 | MS.gene89154:CDS |
AGAAGGATCAATTTGGTTGT+TGG | 0.415306 | 8.1:-78067118 | None:intergenic |
TATTGGTGATGTTCAGAGAT+TGG | 0.419067 | 8.1:+78067479 | MS.gene89154:CDS |
TGCATAGGACTCAAGCAGTT+TGG | 0.420561 | 8.1:+78068450 | MS.gene89154:CDS |
AGCAGCCTGTCGAAACTTCC+CGG | 0.427333 | 8.1:-78068282 | None:intergenic |
ATGGTGGAGGAGGGTTTGGA+TGG | 0.429554 | 8.1:-78067039 | None:intergenic |
GAGCGGCTAAGGTTTGTGTT+AGG | 0.429750 | 8.1:+78067541 | MS.gene89154:CDS |
GCGGTTGGCTGAGGCTGCCA+GGG | 0.433225 | 8.1:+78067839 | MS.gene89154:CDS |
CTAAGCGAGCCATGGCGATC+TGG | 0.433397 | 8.1:-78067062 | None:intergenic |
CTAGGCCTTCGACGGGTTCG+AGG | 0.434337 | 8.1:+78068012 | MS.gene89154:CDS |
TGATACCGGATTCGCAACTT+AGG | 0.441191 | 8.1:+78068474 | MS.gene89154:CDS |
TCAGAGAGCAACTTGGGTTA+GGG | 0.441274 | 8.1:+78068313 | MS.gene89154:CDS |
TGAATTGTCCCACCAGGAAC+AGG | 0.441433 | 8.1:-78067912 | None:intergenic |
TGTGCACTATATTGTTCAAA+AGG | 0.442543 | 8.1:+78068202 | MS.gene89154:CDS |
AGCAAATCTTTGATGGGATT+GGG | 0.444484 | 8.1:+78067595 | MS.gene89154:CDS |
CGCAACTTAGGGAGGAGCTT+CGG | 0.445436 | 8.1:+78068486 | MS.gene89154:CDS |
AGAATCTTAAACAATTTCTC+AGG | 0.455499 | 8.1:-78067714 | None:intergenic |
TGGGTGGTTATCGGAGAGGG+AGG | 0.456595 | 8.1:-78067019 | None:intergenic |
CGAAGAGTGCTTTGAGGGAA+AGG | 0.460347 | 8.1:+78068396 | MS.gene89154:CDS |
TTATGTGAGCAAATCTTTGA+TGG | 0.462169 | 8.1:+78067588 | MS.gene89154:CDS |
GTTTCTAGAGGGAGATTCTC+TGG | 0.463475 | 8.1:-78066850 | None:intergenic |
GCTGATAGAATGATATCATC+TGG | 0.464722 | 8.1:+78067366 | MS.gene89154:CDS |
TATAGAGAGCGGAAGGCATC+CGG | 0.466340 | 8.1:+78068571 | MS.gene89154:CDS |
TCAAGCAGTTTGGTTGATAC+CGG | 0.468722 | 8.1:+78068460 | MS.gene89154:CDS |
GGATGGGTGGTTATCGGAGA+GGG | 0.473259 | 8.1:-78067022 | None:intergenic |
GGTTGTTGGTGTGTGAGATA+AGG | 0.473341 | 8.1:-78067104 | None:intergenic |
GTTATCGGAGAGGGAGGTGG+AGG | 0.475784 | 8.1:-78067013 | None:intergenic |
GAGCAAATCTTTGATGGGAT+TGG | 0.476761 | 8.1:+78067594 | MS.gene89154:CDS |
TAAGTCGTCTGAATCCATTA+GGG | 0.483851 | 8.1:+78067794 | MS.gene89154:CDS |
TATAGTTTCTAGGCCTTCGA+CGG | 0.484032 | 8.1:+78068004 | MS.gene89154:CDS |
CGTATAGATCATTCCTTGGT+CGG | 0.490510 | 8.1:+78068537 | MS.gene89154:CDS |
GGAGCTTCGGATATCTATAT+CGG | 0.492396 | 8.1:+78068499 | MS.gene89154:CDS |
TGATGTTCAGAGATTGGATT+GGG | 0.493523 | 8.1:+78067485 | MS.gene89154:CDS |
ACTCGAAGGGAAACCACCTT+TGG | 0.494638 | 8.1:+78068076 | MS.gene89154:CDS |
TGGTGGAGGAGGGTTTGGAT+GGG | 0.500642 | 8.1:-78067038 | None:intergenic |
GATACCGGATTCGCAACTTA+GGG | 0.501224 | 8.1:+78068475 | MS.gene89154:CDS |
TGTATTGTTTGAGGGATGAA+GGG | 0.501225 | 8.1:+78068339 | MS.gene89154:CDS |
TTCACGAGCTTCTTCGGAGG+CGG | 0.509475 | 8.1:-78066905 | None:intergenic |
GATAACAGCTACGACGATGA+TGG | 0.509578 | 8.1:+78067195 | MS.gene89154:CDS |
ACTACTAGCTGAACGGTAAG+TGG | 0.510113 | 8.1:-78067289 | None:intergenic |
TAGAGGGTCACCCGAATTGA+GGG | 0.510984 | 8.1:+78068226 | MS.gene89154:CDS |
ATAACAGCTACGACGATGAT+GGG | 0.513637 | 8.1:+78067196 | MS.gene89154:CDS |
CCTGCGTATAGATCATTCCT+TGG | 0.514783 | 8.1:+78068533 | MS.gene89154:CDS |
TATGTGAGCAAATCTTTGAT+GGG | 0.523397 | 8.1:+78067589 | MS.gene89154:CDS |
GAATACTTAATGTAATTCTC+CGG | 0.525224 | 8.1:-78068590 | None:intergenic |
ACGATGGATAAGAGCGGCTA+AGG | 0.526663 | 8.1:+78067530 | MS.gene89154:CDS |
CGACGGGTTCGAGGTATTCG+GGG | 0.527084 | 8.1:+78068021 | MS.gene89154:CDS |
CTAGCTATCAGAGAGCAACT+TGG | 0.528557 | 8.1:+78068306 | MS.gene89154:CDS |
TTAGAGGGTCACCCGAATTG+AGG | 0.532934 | 8.1:+78068225 | MS.gene89154:CDS |
CTAAGGTTCCTGTTCCTGGT+GGG | 0.534454 | 8.1:+78067904 | MS.gene89154:CDS |
GGATTTCATCAACGGCTTGG+AGG | 0.539301 | 8.1:-78066978 | None:intergenic |
GTTGGATTTCATCAACGGCT+TGG | 0.539759 | 8.1:-78066981 | None:intergenic |
GAAGGGTTGCATTCGAGTGG+TGG | 0.542924 | 8.1:+78068356 | MS.gene89154:CDS |
TCTAAGGTTCCTGTTCCTGG+TGG | 0.546496 | 8.1:+78067903 | MS.gene89154:CDS |
GGAGCGTTGGATTTCATCAA+CGG | 0.555865 | 8.1:-78066986 | None:intergenic |
TAAGTATCATCTTCAAGAGA+AGG | 0.557557 | 8.1:-78067135 | None:intergenic |
CGGTTGGCTGAGGCTGCCAG+GGG | 0.558857 | 8.1:+78067840 | MS.gene89154:CDS |
GTTAACCGGGAAGTTTCGAC+AGG | 0.559632 | 8.1:+78068277 | MS.gene89154:CDS |
TGTGTCGAAGAGTGCTTTGA+GGG | 0.560985 | 8.1:+78068391 | MS.gene89154:CDS |
GATTTCGTCGCGGTTTGTGG+TGG | 0.561570 | 8.1:-78066947 | None:intergenic |
GCGATCTGGATGGTGGAGGA+GGG | 0.564254 | 8.1:-78067048 | None:intergenic |
GCGAGCCATGGCGATCTGGA+TGG | 0.569502 | 8.1:-78067058 | None:intergenic |
TGGAATTTGATGAACTCGAA+GGG | 0.571767 | 8.1:+78068063 | MS.gene89154:CDS |
CCATGTTTGAGGAGGTGCAT+AGG | 0.575754 | 8.1:+78068435 | MS.gene89154:CDS |
CTCGTCTTCTAAGCGAGCCA+TGG | 0.577030 | 8.1:-78067070 | None:intergenic |
TAGCTATCAGAGAGCAACTT+GGG | 0.577382 | 8.1:+78068307 | MS.gene89154:CDS |
CCTATGCACCTCCTCAAACA+TGG | 0.578200 | 8.1:-78068435 | None:intergenic |
ATGGAATTTGATGAACTCGA+AGG | 0.579968 | 8.1:+78068062 | MS.gene89154:CDS |
GGACAATTCATCCTTTGACT+AGG | 0.582416 | 8.1:+78067925 | MS.gene89154:CDS |
ATCAGCAATACATCGAAGAT+CGG | 0.585205 | 8.1:-78067349 | None:intergenic |
AGCCATGGCGATCTGGATGG+TGG | 0.589496 | 8.1:-78067055 | None:intergenic |
ATAGTTTCTAGGCCTTCGAC+GGG | 0.590918 | 8.1:+78068005 | MS.gene89154:CDS |
GTGTGTCGAAGAGTGCTTTG+AGG | 0.592637 | 8.1:+78068390 | MS.gene89154:CDS |
CTGTTTCGCAGCACACGAGA+AGG | 0.593208 | 8.1:+78068660 | MS.gene89154:CDS |
TTCATCACATACCTAGTCAA+AGG | 0.593358 | 8.1:-78067936 | None:intergenic |
TATGGCTCCTGAACCGACCA+AGG | 0.595571 | 8.1:-78068550 | None:intergenic |
GTGATGTTCAGAGATTGGAT+TGG | 0.598042 | 8.1:+78067484 | MS.gene89154:CDS |
CACGTATACTACTAGCTGAA+CGG | 0.602042 | 8.1:-78067296 | None:intergenic |
ATATTGTTCAAAAGGTTAGA+GGG | 0.602927 | 8.1:+78068210 | MS.gene89154:CDS |
GGTGTTGAGAAGTTGAGTAT+TGG | 0.606513 | 8.1:+78067462 | MS.gene89154:CDS |
TGGATGGGTGGTTATCGGAG+AGG | 0.607438 | 8.1:-78067023 | None:intergenic |
AGGTGGAGGATATGGAGCGT+TGG | 0.609465 | 8.1:-78066999 | None:intergenic |
TTCAAGTTTACGGTAGTGTG+AGG | 0.609746 | 8.1:+78067406 | MS.gene89154:CDS |
CATGGCGATCTGGATGGTGG+AGG | 0.609927 | 8.1:-78067052 | None:intergenic |
CGGAGGCGGTTGAGTCCCAT+CGG | 0.610394 | 8.1:-78066891 | None:intergenic |
GAATACCTCGAACCCGTCGA+AGG | 0.610961 | 8.1:-78068017 | None:intergenic |
GGAGCCATATAGAGAGCGGA+AGG | 0.613579 | 8.1:+78068564 | MS.gene89154:CDS |
AGATCGGTGACTGCTTCAGA+AGG | 0.615546 | 8.1:-78067333 | None:intergenic |
GTATTCTGTTGAAGATCTGG+AGG | 0.617720 | 8.1:+78068607 | MS.gene89154:CDS |
CTCCACCATCCAGATCGCCA+TGG | 0.624970 | 8.1:+78067053 | MS.gene89154:CDS |
CAAATCAAATGAATAGCCAA+AGG | 0.625451 | 8.1:-78068092 | None:intergenic |
AATTCCATATCAGGAGTCGA+AGG | 0.631296 | 8.1:-78068047 | None:intergenic |
TTCAGGAGCCATATAGAGAG+CGG | 0.634754 | 8.1:+78068560 | MS.gene89154:CDS |
GACGGGTTCGAGGTATTCGG+GGG | 0.639781 | 8.1:+78068022 | MS.gene89154:CDS |
ATTATTTGAAGAAGTTAACC+GGG | 0.642168 | 8.1:+78068264 | MS.gene89154:CDS |
ATCAAATGAATAGCCAAAGG+TGG | 0.642625 | 8.1:-78068089 | None:intergenic |
AAAGGATGAATTGTCCCACC+AGG | 0.644369 | 8.1:-78067918 | None:intergenic |
ACCGGATTCGCAACTTAGGG+AGG | 0.644834 | 8.1:+78068478 | MS.gene89154:CDS |
TGAATCCATTAGGGTTCAGG+CGG | 0.646503 | 8.1:+78067803 | MS.gene89154:CDS |
AAGCGATTAGTATTAGTCGT+AGG | 0.646978 | 8.1:+78067688 | MS.gene89154:CDS |
CCCGAATTGAGGGAAATGAT+CGG | 0.650438 | 8.1:+78068236 | MS.gene89154:CDS |
GATGAAGGGTTGCATTCGAG+TGG | 0.651725 | 8.1:+78068353 | MS.gene89154:CDS |
TAGAGGGAGATTCTCTGGTG+AGG | 0.652277 | 8.1:-78066845 | None:intergenic |
CCAAGGAATGATCTATACGC+AGG | 0.657109 | 8.1:-78068533 | None:intergenic |
AGGCGGTTGAGTCCCATCGG+AGG | 0.657767 | 8.1:-78066888 | None:intergenic |
TAGTGTGAGGAAATCAGCTG+TGG | 0.658643 | 8.1:+78067419 | MS.gene89154:CDS |
AGTGGTAACAGTAGTAGCAA+CGG | 0.666045 | 8.1:-78067262 | None:intergenic |
GGTTGGCTGAGGCTGCCAGG+GGG | 0.680009 | 8.1:+78067841 | MS.gene89154:CDS |
TGAACGGTAAGTGGAAGCAG+TGG | 0.687913 | 8.1:-78067280 | None:intergenic |
TAACAGCTACGACGATGATG+GGG | 0.690580 | 8.1:+78067197 | MS.gene89154:CDS |
TAGAGACGAAGATAAGACGA+TGG | 0.707719 | 8.1:+78067514 | MS.gene89154:CDS |
GATAAGACGATGGATAAGAG+CGG | 0.720593 | 8.1:+78067524 | MS.gene89154:CDS |
GGTAAAGATCGATTTCGTCG+CGG | 0.746661 | 8.1:-78066957 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTGCAATTCAATTTAGA+TGG | + | chr8.1:78068125-78068144 | MS.gene89154:CDS | 20.0% |
! | AAATTAAAAAGCTGAATAGC+AGG | - | chr8.1:78067663-78067682 | None:intergenic | 25.0% |
! | AGAATCTTAAACAATTTCTC+AGG | - | chr8.1:78067717-78067736 | None:intergenic | 25.0% |
! | ATATTGTTCAAAAGGTTAGA+GGG | + | chr8.1:78068210-78068229 | MS.gene89154:CDS | 25.0% |
! | ATTATTTGAAGAAGTTAACC+GGG | + | chr8.1:78068264-78068283 | MS.gene89154:CDS | 25.0% |
! | ATTTGAAAATGCTGTTCTTA+AGG | + | chr8.1:78067875-78067894 | MS.gene89154:CDS | 25.0% |
! | GAATACTTAATGTAATTCTC+CGG | - | chr8.1:78068593-78068612 | None:intergenic | 25.0% |
! | GATTATTTGAAGAAGTTAAC+CGG | + | chr8.1:78068263-78068282 | MS.gene89154:CDS | 25.0% |
! | TATATTGTTCAAAAGGTTAG+AGG | + | chr8.1:78068209-78068228 | MS.gene89154:CDS | 25.0% |
! | TCAAAAACAACATCAATATC+AGG | - | chr8.1:78067771-78067790 | None:intergenic | 25.0% |
!!! | CTGTTTTGGATTTTTTTGAA+GGG | + | chr8.1:78068633-78068652 | MS.gene89154:CDS | 25.0% |
!!! | TATTGATGATGCTTGTTTTA+TGG | + | chr8.1:78067623-78067642 | MS.gene89154:CDS | 25.0% |
AGTTCATCAAATTCCATATC+AGG | - | chr8.1:78068059-78068078 | None:intergenic | 30.0% | |
CAAATCAAATGAATAGCCAA+AGG | - | chr8.1:78068095-78068114 | None:intergenic | 30.0% | |
CTTTGGCTATTCATTTGATT+TGG | + | chr8.1:78068093-78068112 | MS.gene89154:CDS | 30.0% | |
TAAGTATCATCTTCAAGAGA+AGG | - | chr8.1:78067138-78067157 | None:intergenic | 30.0% | |
TAAGTATTCTGTTGAAGATC+TGG | + | chr8.1:78068604-78068623 | MS.gene89154:CDS | 30.0% | |
TATGTGAGCAAATCTTTGAT+GGG | + | chr8.1:78067589-78067608 | MS.gene89154:CDS | 30.0% | |
TGTATGAGCTTATAGTTTCT+AGG | + | chr8.1:78067994-78068013 | MS.gene89154:CDS | 30.0% | |
TGTGCACTATATTGTTCAAA+AGG | + | chr8.1:78068202-78068221 | MS.gene89154:CDS | 30.0% | |
TTATGTGAGCAAATCTTTGA+TGG | + | chr8.1:78067588-78067607 | MS.gene89154:CDS | 30.0% | |
! | CGTGAATGTATTCAAGTTTA+CGG | + | chr8.1:78067396-78067415 | MS.gene89154:CDS | 30.0% |
!!! | GATTCGAGTTTTAAGAAACT+CGG | + | chr8.1:78067441-78067460 | MS.gene89154:CDS | 30.0% |
!!! | GCTGTTTTGGATTTTTTTGA+AGG | + | chr8.1:78068632-78068651 | MS.gene89154:CDS | 30.0% |
AAATTCAGATAAAATCCCCC+TGG | - | chr8.1:78067859-78067878 | None:intergenic | 35.0% | |
AAGCGATTAGTATTAGTCGT+AGG | + | chr8.1:78067688-78067707 | MS.gene89154:CDS | 35.0% | |
AGAAGGATCAATTTGGTTGT+TGG | - | chr8.1:78067121-78067140 | None:intergenic | 35.0% | |
AGCAAATCTTTGATGGGATT+GGG | + | chr8.1:78067595-78067614 | MS.gene89154:CDS | 35.0% | |
ATCAAATGAATAGCCAAAGG+TGG | - | chr8.1:78068092-78068111 | None:intergenic | 35.0% | |
ATCAGCAATACATCGAAGAT+CGG | - | chr8.1:78067352-78067371 | None:intergenic | 35.0% | |
ATGGAATTTGATGAACTCGA+AGG | + | chr8.1:78068062-78068081 | MS.gene89154:CDS | 35.0% | |
CTTCAAGAGAAGGATCAATT+TGG | - | chr8.1:78067128-78067147 | None:intergenic | 35.0% | |
GCTGATAGAATGATATCATC+TGG | + | chr8.1:78067366-78067385 | MS.gene89154:CDS | 35.0% | |
TAAGTCGTCTGAATCCATTA+GGG | + | chr8.1:78067794-78067813 | MS.gene89154:CDS | 35.0% | |
TCAAAAAATCATCCTCCGAT+GGG | + | chr8.1:78066876-78066895 | MS.gene89154:CDS | 35.0% | |
TGATCTTCATGATGCTTTGA+TGG | + | chr8.1:78067737-78067756 | MS.gene89154:CDS | 35.0% | |
TGATGTTCAGAGATTGGATT+GGG | + | chr8.1:78067485-78067504 | MS.gene89154:CDS | 35.0% | |
TGGAATTTGATGAACTCGAA+GGG | + | chr8.1:78068063-78068082 | MS.gene89154:CDS | 35.0% | |
TGTATTGTTTGAGGGATGAA+GGG | + | chr8.1:78068339-78068358 | MS.gene89154:CDS | 35.0% | |
TTCATCACATACCTAGTCAA+AGG | - | chr8.1:78067939-78067958 | None:intergenic | 35.0% | |
TTGTATTGTTTGAGGGATGA+AGG | + | chr8.1:78068338-78068357 | MS.gene89154:CDS | 35.0% | |
! | AGCTTTTAATGCCATGTTTG+AGG | + | chr8.1:78068424-78068443 | MS.gene89154:CDS | 35.0% |
! | TAGGGTCTTGTATTGTTTGA+GGG | + | chr8.1:78068331-78068350 | MS.gene89154:CDS | 35.0% |
! | TTAGGGTCTTGTATTGTTTG+AGG | + | chr8.1:78068330-78068349 | MS.gene89154:CDS | 35.0% |
! | TTTTAATGCCATGTTTGAGG+AGG | + | chr8.1:78068427-78068446 | MS.gene89154:CDS | 35.0% |
!! | TATTGGTGATGTTCAGAGAT+TGG | + | chr8.1:78067479-78067498 | MS.gene89154:CDS | 35.0% |
!!! | ATTTTTTGAGCGGTTTCTAG+AGG | - | chr8.1:78066865-78066884 | None:intergenic | 35.0% |
!!! | CATTTTTTCACGAGCTTCTT+CGG | - | chr8.1:78066914-78066933 | None:intergenic | 35.0% |
!!! | TGATGCTTGTTTTATGGAGA+CGG | + | chr8.1:78067629-78067648 | MS.gene89154:CDS | 35.0% |
!!! | TTTTTTGAGCGGTTTCTAGA+GGG | - | chr8.1:78066864-78066883 | None:intergenic | 35.0% |
AATTCCATATCAGGAGTCGA+AGG | - | chr8.1:78068050-78068069 | None:intergenic | 40.0% | |
ACCGATCATTTCCCTCAATT+CGG | - | chr8.1:78068240-78068259 | None:intergenic | 40.0% | |
AGTGGTAACAGTAGTAGCAA+CGG | - | chr8.1:78067265-78067284 | None:intergenic | 40.0% | |
ATAACAGCTACGACGATGAT+GGG | + | chr8.1:78067196-78067215 | MS.gene89154:CDS | 40.0% | |
CACGTATACTACTAGCTGAA+CGG | - | chr8.1:78067299-78067318 | None:intergenic | 40.0% | |
CGTATAGATCATTCCTTGGT+CGG | + | chr8.1:78068537-78068556 | MS.gene89154:CDS | 40.0% | |
CTAAGTCGTCTGAATCCATT+AGG | + | chr8.1:78067793-78067812 | MS.gene89154:CDS | 40.0% | |
CTCAAAAAATCATCCTCCGA+TGG | + | chr8.1:78066875-78066894 | MS.gene89154:CDS | 40.0% | |
GAGCAAATCTTTGATGGGAT+TGG | + | chr8.1:78067594-78067613 | MS.gene89154:CDS | 40.0% | |
GATAAGACGATGGATAAGAG+CGG | + | chr8.1:78067524-78067543 | MS.gene89154:CDS | 40.0% | |
GGACAATTCATCCTTTGACT+AGG | + | chr8.1:78067925-78067944 | MS.gene89154:CDS | 40.0% | |
GGAGCTTCGGATATCTATAT+CGG | + | chr8.1:78068499-78068518 | MS.gene89154:CDS | 40.0% | |
GTATTCTGTTGAAGATCTGG+AGG | + | chr8.1:78068607-78068626 | MS.gene89154:CDS | 40.0% | |
GTGATGTTCAGAGATTGGAT+TGG | + | chr8.1:78067484-78067503 | MS.gene89154:CDS | 40.0% | |
TAGAGACGAAGATAAGACGA+TGG | + | chr8.1:78067514-78067533 | MS.gene89154:CDS | 40.0% | |
TAGCTATCAGAGAGCAACTT+GGG | + | chr8.1:78068307-78068326 | MS.gene89154:CDS | 40.0% | |
TGTTCTTAAGGAGCCTTCTA+AGG | + | chr8.1:78067887-78067906 | MS.gene89154:CDS | 40.0% | |
! | GGTGTTGAGAAGTTGAGTAT+TGG | + | chr8.1:78067462-78067481 | MS.gene89154:CDS | 40.0% |
! | GTTTTATGGAGACGGTGAAA+GGG | + | chr8.1:78067637-78067656 | MS.gene89154:CDS | 40.0% |
! | TATAGTTTCTAGGCCTTCGA+CGG | + | chr8.1:78068004-78068023 | MS.gene89154:CDS | 40.0% |
! | TCAAGCAGTTTGGTTGATAC+CGG | + | chr8.1:78068460-78068479 | MS.gene89154:CDS | 40.0% |
! | TGTTTTATGGAGACGGTGAA+AGG | + | chr8.1:78067636-78067655 | MS.gene89154:CDS | 40.0% |
! | TTCAAGTTTACGGTAGTGTG+AGG | + | chr8.1:78067406-78067425 | MS.gene89154:CDS | 40.0% |
!!! | TCGGAGGATGATTTTTTGAG+CGG | - | chr8.1:78066875-78066894 | None:intergenic | 40.0% |
AAAGGATGAATTGTCCCACC+AGG | - | chr8.1:78067921-78067940 | None:intergenic | 45.0% | |
ACTACTAGCTGAACGGTAAG+TGG | - | chr8.1:78067292-78067311 | None:intergenic | 45.0% | |
ATCAGAGAGCAACTTGGGTT+AGG | + | chr8.1:78068312-78068331 | MS.gene89154:CDS | 45.0% | |
CCAAGGAATGATCTATACGC+AGG | - | chr8.1:78068536-78068555 | None:intergenic | 45.0% | |
CCCGAATTGAGGGAAATGAT+CGG | + | chr8.1:78068236-78068255 | MS.gene89154:CDS | 45.0% | |
CCGATCATTTCCCTCAATTC+GGG | - | chr8.1:78068239-78068258 | None:intergenic | 45.0% | |
CCTGCGTATAGATCATTCCT+TGG | + | chr8.1:78068533-78068552 | MS.gene89154:CDS | 45.0% | |
CTAGCTATCAGAGAGCAACT+TGG | + | chr8.1:78068306-78068325 | MS.gene89154:CDS | 45.0% | |
GATAACAGCTACGACGATGA+TGG | + | chr8.1:78067195-78067214 | MS.gene89154:CDS | 45.0% | |
GATACCGGATTCGCAACTTA+GGG | + | chr8.1:78068475-78068494 | MS.gene89154:CDS | 45.0% | |
GGTTGTTGGTGTGTGAGATA+AGG | - | chr8.1:78067107-78067126 | None:intergenic | 45.0% | |
GTCTGAATCCATTAGGGTTC+AGG | + | chr8.1:78067800-78067819 | MS.gene89154:CDS | 45.0% | |
GTTGGATTTCATCAACGGCT+TGG | - | chr8.1:78066984-78067003 | None:intergenic | 45.0% | |
TAACAGCTACGACGATGATG+GGG | + | chr8.1:78067197-78067216 | MS.gene89154:CDS | 45.0% | |
TAGTGTGAGGAAATCAGCTG+TGG | + | chr8.1:78067419-78067438 | MS.gene89154:CDS | 45.0% | |
TCAGAGAGCAACTTGGGTTA+GGG | + | chr8.1:78068313-78068332 | MS.gene89154:CDS | 45.0% | |
TGAATCCATTAGGGTTCAGG+CGG | + | chr8.1:78067803-78067822 | MS.gene89154:CDS | 45.0% | |
TGATACCGGATTCGCAACTT+AGG | + | chr8.1:78068474-78068493 | MS.gene89154:CDS | 45.0% | |
TGCATAGGACTCAAGCAGTT+TGG | + | chr8.1:78068450-78068469 | MS.gene89154:CDS | 45.0% | |
TTCAGGAGCCATATAGAGAG+CGG | + | chr8.1:78068560-78068579 | MS.gene89154:CDS | 45.0% | |
! | ATAGTTTCTAGGCCTTCGAC+GGG | + | chr8.1:78068005-78068024 | MS.gene89154:CDS | 45.0% |
! | GGTAAAGATCGATTTCGTCG+CGG | - | chr8.1:78066960-78066979 | None:intergenic | 45.0% |
! | GTTTCTAGAGGGAGATTCTC+TGG | - | chr8.1:78066853-78066872 | None:intergenic | 45.0% |
! | TTTTTCACGAGCTTCTTCGG+AGG | - | chr8.1:78066911-78066930 | None:intergenic | 45.0% |
!! | GGAGCGTTGGATTTCATCAA+CGG | - | chr8.1:78066989-78067008 | None:intergenic | 45.0% |
!! | TGTGTCGAAGAGTGCTTTGA+GGG | + | chr8.1:78068391-78068410 | MS.gene89154:CDS | 45.0% |
!!! | TCGAGTGGTGGATTTTCTTC+TGG | + | chr8.1:78068368-78068387 | MS.gene89154:CDS | 45.0% |
ACGATGGATAAGAGCGGCTA+AGG | + | chr8.1:78067530-78067549 | MS.gene89154:CDS | 50.0% | |
ACTCGAAGGGAAACCACCTT+TGG | + | chr8.1:78068076-78068095 | MS.gene89154:CDS | 50.0% | |
AGATCGGTGACTGCTTCAGA+AGG | - | chr8.1:78067336-78067355 | None:intergenic | 50.0% | |
CCAGGAACAGGAACCTTAGA+AGG | - | chr8.1:78067903-78067922 | None:intergenic | 50.0% | |
CCTATGCACCTCCTCAAACA+TGG | - | chr8.1:78068438-78068457 | None:intergenic | 50.0% | |
CTAAGGTTCCTGTTCCTGGT+GGG | + | chr8.1:78067904-78067923 | MS.gene89154:CDS | 50.0% | |
GAGCGGCTAAGGTTTGTGTT+AGG | + | chr8.1:78067541-78067560 | MS.gene89154:CDS | 50.0% | |
GATGAAGGGTTGCATTCGAG+TGG | + | chr8.1:78068353-78068372 | MS.gene89154:CDS | 50.0% | |
GATGCCTTCCGCTCTCTATA+TGG | - | chr8.1:78068571-78068590 | None:intergenic | 50.0% | |
GGATCCTTCGACTCCTGATA+TGG | + | chr8.1:78068043-78068062 | MS.gene89154:CDS | 50.0% | |
GGGTTTGGATGGGTGGTTAT+CGG | - | chr8.1:78067031-78067050 | None:intergenic | 50.0% | |
GTTAACCGGGAAGTTTCGAC+AGG | + | chr8.1:78068277-78068296 | MS.gene89154:CDS | 50.0% | |
TAGAGGGAGATTCTCTGGTG+AGG | - | chr8.1:78066848-78066867 | None:intergenic | 50.0% | |
TAGAGGGTCACCCGAATTGA+GGG | + | chr8.1:78068226-78068245 | MS.gene89154:CDS | 50.0% | |
TCCTCCCTAAGTTGCGAATC+CGG | - | chr8.1:78068482-78068501 | None:intergenic | 50.0% | |
TGAACGGTAAGTGGAAGCAG+TGG | - | chr8.1:78067283-78067302 | None:intergenic | 50.0% | |
TGAATTGTCCCACCAGGAAC+AGG | - | chr8.1:78067915-78067934 | None:intergenic | 50.0% | |
TTAGAGGGTCACCCGAATTG+AGG | + | chr8.1:78068225-78068244 | MS.gene89154:CDS | 50.0% | |
! | AGATCTGGAGGACGCTGTTT+TGG | + | chr8.1:78068619-78068638 | MS.gene89154:CDS | 50.0% |
! | ATCGATTTCGTCGCGGTTTG+TGG | - | chr8.1:78066953-78066972 | None:intergenic | 50.0% |
! | CCATGTTTGAGGAGGTGCAT+AGG | + | chr8.1:78068435-78068454 | MS.gene89154:CDS | 50.0% |
! | GATCATTCCTTGGTCGGTTC+AGG | + | chr8.1:78068543-78068562 | MS.gene89154:CDS | 50.0% |
! | GGATTTCATCAACGGCTTGG+AGG | - | chr8.1:78066981-78067000 | None:intergenic | 50.0% |
! | TCTAAGGTTCCTGTTCCTGG+TGG | + | chr8.1:78067903-78067922 | MS.gene89154:CDS | 50.0% |
! | TTCGACGGGTTCGAGGTATT+CGG | + | chr8.1:78068019-78068038 | MS.gene89154:CDS | 50.0% |
!! | CCTTCTAAGGTTCCTGTTCC+TGG | + | chr8.1:78067900-78067919 | MS.gene89154:CDS | 50.0% |
!! | CGAAGAGTGCTTTGAGGGAA+AGG | + | chr8.1:78068396-78068415 | MS.gene89154:CDS | 50.0% |
!! | GTGTGTCGAAGAGTGCTTTG+AGG | + | chr8.1:78068390-78068409 | MS.gene89154:CDS | 50.0% |
!! | TATAGAGAGCGGAAGGCATC+CGG | + | chr8.1:78068571-78068590 | MS.gene89154:CDS | 50.0% |
ACCGGATTCGCAACTTAGGG+AGG | + | chr8.1:78068478-78068497 | MS.gene89154:CDS | 55.0% | |
AGCAGCCTGTCGAAACTTCC+CGG | - | chr8.1:78068285-78068304 | None:intergenic | 55.0% | |
AGGTGGAGGATATGGAGCGT+TGG | - | chr8.1:78067002-78067021 | None:intergenic | 55.0% | |
CGCAACTTAGGGAGGAGCTT+CGG | + | chr8.1:78068486-78068505 | MS.gene89154:CDS | 55.0% | |
CTCGTCTTCTAAGCGAGCCA+TGG | - | chr8.1:78067073-78067092 | None:intergenic | 55.0% | |
CTGTTTCGCAGCACACGAGA+AGG | + | chr8.1:78068660-78068679 | MS.gene89154:CDS | 55.0% | |
CTTCTCGTGTGCTGCGAAAC+AGG | - | chr8.1:78068662-78068681 | None:intergenic | 55.0% | |
GAAGGGTTGCATTCGAGTGG+TGG | + | chr8.1:78068356-78068375 | MS.gene89154:CDS | 55.0% | |
GAATACCTCGAACCCGTCGA+AGG | - | chr8.1:78068020-78068039 | None:intergenic | 55.0% | |
GATTTCGTCGCGGTTTGTGG+TGG | - | chr8.1:78066950-78066969 | None:intergenic | 55.0% | |
GGAGCCATATAGAGAGCGGA+AGG | + | chr8.1:78068564-78068583 | MS.gene89154:CDS | 55.0% | |
GGATGGGTGGTTATCGGAGA+GGG | - | chr8.1:78067025-78067044 | None:intergenic | 55.0% | |
TATGGCTCCTGAACCGACCA+AGG | - | chr8.1:78068553-78068572 | None:intergenic | 55.0% | |
TGGATGGGTGGTTATCGGAG+AGG | - | chr8.1:78067026-78067045 | None:intergenic | 55.0% | |
TGGTGGAGGAGGGTTTGGAT+GGG | - | chr8.1:78067041-78067060 | None:intergenic | 55.0% | |
TTCACGAGCTTCTTCGGAGG+CGG | - | chr8.1:78066908-78066927 | None:intergenic | 55.0% | |
! | AGGCGGCTGAGATTTTGTCG+CGG | + | chr8.1:78067820-78067839 | MS.gene89154:CDS | 55.0% |
! | ATGGTGGAGGAGGGTTTGGA+TGG | - | chr8.1:78067042-78067061 | None:intergenic | 55.0% |
! | CGCTTTTCGCGAGTGAGAAG+AGG | + | chr8.1:78067565-78067584 | MS.gene89154:CDS | 55.0% |
! | GGCTGAGATTTTGTCGCGGT+TGG | + | chr8.1:78067824-78067843 | MS.gene89154:CDS | 55.0% |
! | TCGACGGGTTCGAGGTATTC+GGG | + | chr8.1:78068020-78068039 | MS.gene89154:CDS | 55.0% |
!! | GATTTTGTCGCGGTTGGCTG+AGG | + | chr8.1:78067830-78067849 | MS.gene89154:CDS | 55.0% |
AGCCATGGCGATCTGGATGG+TGG | - | chr8.1:78067058-78067077 | None:intergenic | 60.0% | |
CTAAGCGAGCCATGGCGATC+TGG | - | chr8.1:78067065-78067084 | None:intergenic | 60.0% | |
CTCAGCCGCCTGAACCCTAA+TGG | - | chr8.1:78067811-78067830 | None:intergenic | 60.0% | |
CTCCACCATCCAGATCGCCA+TGG | + | chr8.1:78067053-78067072 | MS.gene89154:CDS | 60.0% | |
GGAGAGGGAGGTGGAGGATA+TGG | - | chr8.1:78067010-78067029 | None:intergenic | 60.0% | |
GTGGTTATCGGAGAGGGAGG+TGG | - | chr8.1:78067019-78067038 | None:intergenic | 60.0% | |
GTTATCGGAGAGGGAGGTGG+AGG | - | chr8.1:78067016-78067035 | None:intergenic | 60.0% | |
TGGAGGAGGGTTTGGATGGG+TGG | - | chr8.1:78067038-78067057 | None:intergenic | 60.0% | |
TGGGTGGTTATCGGAGAGGG+AGG | - | chr8.1:78067022-78067041 | None:intergenic | 60.0% | |
! | CATGGCGATCTGGATGGTGG+AGG | - | chr8.1:78067055-78067074 | None:intergenic | 60.0% |
! | CGACGGGTTCGAGGTATTCG+GGG | + | chr8.1:78068021-78068040 | MS.gene89154:CDS | 60.0% |
! | GACGGGTTCGAGGTATTCGG+GGG | + | chr8.1:78068022-78068041 | MS.gene89154:CDS | 60.0% |
!! | CTGGATGGTGGAGGAGGGTT+TGG | - | chr8.1:78067046-78067065 | None:intergenic | 60.0% |
!! | GCGATCTGGATGGTGGAGGA+GGG | - | chr8.1:78067051-78067070 | None:intergenic | 60.0% |
AGGCGGTTGAGTCCCATCGG+AGG | - | chr8.1:78066891-78066910 | None:intergenic | 65.0% | |
CGGAGGCGGTTGAGTCCCAT+CGG | - | chr8.1:78066894-78066913 | None:intergenic | 65.0% | |
GCGAGCCATGGCGATCTGGA+TGG | - | chr8.1:78067061-78067080 | None:intergenic | 65.0% | |
! | CTAGGCCTTCGACGGGTTCG+AGG | + | chr8.1:78068012-78068031 | MS.gene89154:CDS | 65.0% |
!! | GGCGATCTGGATGGTGGAGG+AGG | - | chr8.1:78067052-78067071 | None:intergenic | 65.0% |
! | CGGTTGGCTGAGGCTGCCAG+GGG | + | chr8.1:78067840-78067859 | MS.gene89154:CDS | 70.0% |
! | GCGGTTGGCTGAGGCTGCCA+GGG | + | chr8.1:78067839-78067858 | MS.gene89154:CDS | 70.0% |
! | GGTTGGCTGAGGCTGCCAGG+GGG | + | chr8.1:78067841-78067860 | MS.gene89154:CDS | 70.0% |
! | CGCGGTTGGCTGAGGCTGCC+AGG | + | chr8.1:78067838-78067857 | MS.gene89154:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 78066841 | 78068694 | 78066841 | ID=MS.gene89154 |
chr8.1 | mRNA | 78066841 | 78068694 | 78066841 | ID=MS.gene89154.t1;Parent=MS.gene89154 |
chr8.1 | exon | 78066841 | 78068694 | 78066841 | ID=MS.gene89154.t1.exon1;Parent=MS.gene89154.t1 |
chr8.1 | CDS | 78066841 | 78068694 | 78066841 | ID=cds.MS.gene89154.t1;Parent=MS.gene89154.t1 |
Gene Sequence |
Protein sequence |