Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92819.t1 | XP_003621181.1 | 100 | 120 | 0 | 0 | 1 | 120 | 1 | 120 | 4.60E-57 | 230.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92819.t1 | P40590 | 98.3 | 120 | 2 | 0 | 1 | 120 | 1 | 120 | 2.1e-58 | 226.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92819.t1 | Q2HVS3 | 100.0 | 120 | 0 | 0 | 1 | 120 | 1 | 120 | 3.3e-57 | 230.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049140 | MS.gene92819 | 0.828161 | 1.05E-54 | -1.69E-46 |
| MS.gene049756 | MS.gene92819 | 0.806039 | 9.98E-50 | -1.69E-46 |
| MS.gene050114 | MS.gene92819 | 0.836553 | 8.75E-57 | -1.69E-46 |
| MS.gene050277 | MS.gene92819 | 0.839719 | 1.34E-57 | -1.69E-46 |
| MS.gene050317 | MS.gene92819 | 0.825035 | 5.84E-54 | -1.69E-46 |
| MS.gene050320 | MS.gene92819 | 0.836446 | 9.32E-57 | -1.69E-46 |
| MS.gene050752 | MS.gene92819 | 0.80612 | 9.60E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene92819 | 0.856135 | 3.95E-62 | -1.69E-46 |
| MS.gene051003 | MS.gene92819 | 0.815799 | 7.68E-52 | -1.69E-46 |
| MS.gene051063 | MS.gene92819 | 0.837166 | 6.10E-57 | -1.69E-46 |
| MS.gene051233 | MS.gene92819 | 0.800108 | 1.68E-48 | -1.69E-46 |
| MS.gene051245 | MS.gene92819 | 0.812308 | 4.53E-51 | -1.69E-46 |
| MS.gene051451 | MS.gene92819 | 0.840566 | 8.05E-58 | -1.69E-46 |
| MS.gene051746 | MS.gene92819 | 0.892114 | 2.14E-74 | -1.69E-46 |
| MS.gene051748 | MS.gene92819 | 0.892655 | 1.30E-74 | -1.69E-46 |
| MS.gene051756 | MS.gene92819 | 0.846284 | 2.39E-59 | -1.69E-46 |
| MS.gene051757 | MS.gene92819 | 0.805665 | 1.20E-49 | -1.69E-46 |
| MS.gene051850 | MS.gene92819 | 0.824481 | 7.89E-54 | -1.69E-46 |
| MS.gene05188 | MS.gene92819 | 0.828357 | 9.40E-55 | -1.69E-46 |
| MS.gene051903 | MS.gene92819 | 0.867004 | 1.88E-65 | -1.69E-46 |
| MS.gene051975 | MS.gene92819 | 0.814487 | 1.50E-51 | -1.69E-46 |
| MS.gene052434 | MS.gene92819 | 0.814335 | 1.62E-51 | -1.69E-46 |
| MS.gene052947 | MS.gene92819 | 0.855216 | 7.32E-62 | -1.69E-46 |
| MS.gene053058 | MS.gene92819 | 0.810982 | 8.79E-51 | -1.69E-46 |
| MS.gene053109 | MS.gene92819 | 0.871791 | 5.22E-67 | -1.69E-46 |
| MS.gene053381 | MS.gene92819 | 0.827946 | 1.18E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene92819 | 0.84267 | 2.24E-58 | -1.69E-46 |
| MS.gene054403 | MS.gene92819 | 0.803625 | 3.19E-49 | -1.69E-46 |
| MS.gene05469 | MS.gene92819 | 0.829032 | 6.46E-55 | -1.69E-46 |
| MS.gene055311 | MS.gene92819 | 0.816439 | 5.53E-52 | -1.69E-46 |
| MS.gene055424 | MS.gene92819 | 0.814889 | 1.22E-51 | -1.69E-46 |
| MS.gene055441 | MS.gene92819 | 0.808901 | 2.47E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene92819 | 0.821108 | 4.81E-53 | -1.69E-46 |
| MS.gene056075 | MS.gene92819 | 0.811809 | 5.81E-51 | -1.69E-46 |
| MS.gene056403 | MS.gene92819 | 0.802033 | 6.80E-49 | -1.69E-46 |
| MS.gene056432 | MS.gene92819 | 0.803396 | 3.56E-49 | -1.69E-46 |
| MS.gene056605 | MS.gene92819 | 0.810282 | 1.25E-50 | -1.69E-46 |
| MS.gene056631 | MS.gene92819 | 0.844119 | 9.21E-59 | -1.69E-46 |
| MS.gene056752 | MS.gene92819 | 0.823023 | 1.73E-53 | -1.69E-46 |
| MS.gene056896 | MS.gene92819 | 0.802625 | 5.13E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene92819 | 0.822718 | 2.04E-53 | -1.69E-46 |
| MS.gene057057 | MS.gene92819 | 0.842265 | 2.87E-58 | -1.69E-46 |
| MS.gene057094 | MS.gene92819 | 0.895126 | 1.29E-75 | -1.69E-46 |
| MS.gene057234 | MS.gene92819 | 0.847537 | 1.09E-59 | -1.69E-46 |
| MS.gene057999 | MS.gene92819 | 0.835702 | 1.44E-56 | -1.69E-46 |
| MS.gene058055 | MS.gene92819 | 0.815924 | 7.20E-52 | -1.69E-46 |
| MS.gene058238 | MS.gene92819 | 0.848638 | 5.40E-60 | -1.69E-46 |
| MS.gene058906 | MS.gene92819 | 0.835974 | 1.23E-56 | -1.69E-46 |
| MS.gene059171 | MS.gene92819 | 0.829053 | 6.38E-55 | -1.69E-46 |
| MS.gene059360 | MS.gene92819 | 0.801231 | 9.93E-49 | -1.69E-46 |
| MS.gene059898 | MS.gene92819 | 0.814947 | 1.19E-51 | -1.69E-46 |
| MS.gene06001 | MS.gene92819 | 0.876907 | 9.61E-69 | -1.69E-46 |
| MS.gene06010 | MS.gene92819 | 0.817415 | 3.34E-52 | -1.69E-46 |
| MS.gene06011 | MS.gene92819 | 0.869375 | 3.25E-66 | -1.69E-46 |
| MS.gene060463 | MS.gene92819 | 0.857013 | 2.18E-62 | -1.69E-46 |
| MS.gene060465 | MS.gene92819 | 0.862072 | 6.57E-64 | -1.69E-46 |
| MS.gene060586 | MS.gene92819 | 0.811975 | 5.35E-51 | -1.69E-46 |
| MS.gene060702 | MS.gene92819 | 0.8376 | 4.72E-57 | -1.69E-46 |
| MS.gene060763 | MS.gene92819 | 0.848378 | 6.37E-60 | -1.69E-46 |
| MS.gene060869 | MS.gene92819 | 0.817563 | 3.09E-52 | -1.69E-46 |
| MS.gene060870 | MS.gene92819 | 0.800289 | 1.55E-48 | -1.69E-46 |
| MS.gene061145 | MS.gene92819 | 0.831583 | 1.54E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92819.t1 | MTR_7g010150 | 100.000 | 120 | 0 | 0 | 1 | 120 | 1 | 120 | 4.69e-83 | 238 |
| MS.gene92819.t1 | MTR_8g467460 | 99.160 | 119 | 1 | 0 | 1 | 119 | 1 | 119 | 2.73e-81 | 234 |
| MS.gene92819.t1 | MTR_5g040570 | 96.667 | 120 | 4 | 0 | 1 | 120 | 1 | 120 | 2.85e-80 | 231 |
| MS.gene92819.t1 | MTR_7g011050 | 63.717 | 113 | 25 | 1 | 1 | 113 | 1 | 97 | 5.56e-44 | 139 |
| MS.gene92819.t1 | MTR_8g019410 | 47.863 | 117 | 23 | 2 | 4 | 119 | 47 | 126 | 1.49e-20 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92819.t1 | AT1G26880 | 90.833 | 120 | 11 | 0 | 1 | 120 | 1 | 120 | 2.57e-75 | 219 |
| MS.gene92819.t1 | AT1G69620 | 91.597 | 119 | 10 | 0 | 1 | 119 | 1 | 119 | 9.90e-75 | 217 |
| MS.gene92819.t1 | AT3G28900 | 88.333 | 120 | 14 | 0 | 1 | 120 | 1 | 120 | 4.98e-73 | 213 |
| MS.gene92819.t1 | AT1G26880 | 91.304 | 92 | 8 | 0 | 1 | 92 | 1 | 92 | 6.96e-58 | 174 |
Find 31 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAACCGCCGCACTGTTAAC+AGG | 0.305052 | 7.1:+85340582 | MS.gene92819:CDS |
| TGGATCCTCTTTCCAGTAAC+AGG | 0.314412 | 7.1:-85339319 | None:intergenic |
| GGACCTAAGTGTCCTGTTAC+TGG | 0.331250 | 7.1:+85339307 | MS.gene92819:CDS |
| CGCACTGTTAACAGGGCTTA+TGG | 0.356563 | 7.1:+85340590 | MS.gene92819:CDS |
| AACACGATGCTGGTTGGATT+TGG | 0.389836 | 7.1:-85339085 | None:intergenic |
| TTAACAGTGCGGCGGTTCCT+AGG | 0.468395 | 7.1:-85340578 | None:intergenic |
| CCTTTCCCTAACAGCTCCTC+CGG | 0.470814 | 7.1:-85340624 | None:intergenic |
| TTTATCCGGAGGAGCTGTTA+GGG | 0.501294 | 7.1:+85340619 | MS.gene92819:CDS |
| TTTCCAGTAACAGGACACTT+AGG | 0.509665 | 7.1:-85339310 | None:intergenic |
| ACGATGCTGGTTGGATTTGG+TGG | 0.532546 | 7.1:-85339082 | None:intergenic |
| CATCGTGTTGTTAAGACACC+TGG | 0.536949 | 7.1:+85339099 | MS.gene92819:CDS |
| AGTGTCCTGTTACTGGAAAG+AGG | 0.543803 | 7.1:+85339314 | MS.gene92819:CDS |
| CTTAACAACACGATGCTGGT+TGG | 0.545517 | 7.1:-85339091 | None:intergenic |
| GTTACTGGAAAGAGGATCCA+AGG | 0.571456 | 7.1:+85339322 | MS.gene92819:CDS |
| ACAACTAAGAAGAGAGCTAG+TGG | 0.577057 | 7.1:+85339286 | MS.gene92819:CDS |
| GTGTCTTAACAACACGATGC+TGG | 0.578379 | 7.1:-85339095 | None:intergenic |
| TGGCATAGCTGTGTCTCCTA+CGG | 0.580308 | 7.1:-85339062 | None:intergenic |
| GCTCTTCAACAAGGAAAGCA+CGG | 0.587996 | 7.1:-85340738 | None:intergenic |
| CCGGAGGAGCTGTTAGGGAA+AGG | 0.595594 | 7.1:+85340624 | MS.gene92819:CDS |
| GAACCGCCGCACTGTTAACA+GGG | 0.611783 | 7.1:+85340583 | MS.gene92819:CDS |
| CTAGACCTCTTGTATTCAGT+AGG | 0.617053 | 7.1:-85340551 | None:intergenic |
| TTACTGGAAAGAGGATCCAA+GGG | 0.629653 | 7.1:+85339323 | MS.gene92819:CDS |
| TGAGACCTACTGAATACAAG+AGG | 0.631121 | 7.1:+85340546 | MS.gene92819:CDS |
| ACAAGAGGTCTAGATTGCCT+AGG | 0.636078 | 7.1:+85340561 | MS.gene92819:CDS |
| TATTCAGTAGGTCTCAAGTG+TGG | 0.667813 | 7.1:-85340539 | None:intergenic |
| AAGCCCTGTTAACAGTGCGG+CGG | 0.691394 | 7.1:-85340586 | None:intergenic |
| ACTGTTAACAGGGCTTATGG+AGG | 0.693206 | 7.1:+85340593 | MS.gene92819:CDS |
| TTCAGAGACTCACATACCGT+AGG | 0.721913 | 7.1:+85339046 | MS.gene92819:CDS |
| CATAAGCCCTGTTAACAGTG+CGG | 0.730145 | 7.1:-85340589 | None:intergenic |
| TACTGGAAAGAGGATCCAAG+GGG | 0.738216 | 7.1:+85339324 | MS.gene92819:CDS |
| GTATGTGAGTCTCTGAACCA+TGG | 0.739024 | 7.1:-85339040 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAAAATCAATTATTTG+TGG | + | chr7.1:85339610-85339629 | MS.gene92819:intron | 10.0% |
| !! | ATTTGAAAATTGAAAATATT+AGG | - | chr7.1:85339694-85339713 | None:intergenic | 10.0% |
| !!! | TTTTTTAGAAATTAATATGT+TGG | + | chr7.1:85339368-85339387 | MS.gene92819:intron | 10.0% |
| !! | TAACAAATCTTCAATAAAAA+TGG | - | chr7.1:85340024-85340043 | None:intergenic | 15.0% |
| !! | TTTGCAATTATTAATGTTAA+TGG | + | chr7.1:85339575-85339594 | MS.gene92819:intron | 15.0% |
| !!! | TTTGATTAATTTGTGAAAAT+GGG | + | chr7.1:85339228-85339247 | MS.gene92819:intron | 15.0% |
| !!! | TTTTGATTAATTTGTGAAAA+TGG | + | chr7.1:85339227-85339246 | MS.gene92819:intron | 15.0% |
| !! | GAATGAAAATTAAAAGTAGT+AGG | - | chr7.1:85340398-85340417 | None:intergenic | 20.0% |
| !!! | TTAATACTACAATTTTGTGA+GGG | - | chr7.1:85340184-85340203 | None:intergenic | 20.0% |
| !!! | TTAATATGTTGGTTATACAT+AGG | + | chr7.1:85339379-85339398 | MS.gene92819:intron | 20.0% |
| !!! | TTTAATACTACAATTTTGTG+AGG | - | chr7.1:85340185-85340204 | None:intergenic | 20.0% |
| ! | AAACTATCTCTTCTGTAATA+GGG | - | chr7.1:85339882-85339901 | None:intergenic | 25.0% |
| ! | AATGTTCTTACTTCAATGTT+GGG | + | chr7.1:85339644-85339663 | MS.gene92819:intron | 25.0% |
| ! | AGATACCCTTTCTAAATTAT+TGG | + | chr7.1:85340204-85340223 | MS.gene92819:intron | 25.0% |
| ! | AGTCACCAATAATTTAGAAA+GGG | - | chr7.1:85340212-85340231 | None:intergenic | 25.0% |
| ! | ATCTATCATGTTTCAAACAT+AGG | - | chr7.1:85340048-85340067 | None:intergenic | 25.0% |
| ! | GAAAATTAAAAGTAGTAGGT+AGG | - | chr7.1:85340394-85340413 | None:intergenic | 25.0% |
| ! | GACTTGTATTATTCATCAAT+TGG | + | chr7.1:85339495-85339514 | MS.gene92819:intron | 25.0% |
| ! | GATATATGTGAGTTTATGAT+AGG | + | chr7.1:85339473-85339492 | MS.gene92819:intron | 25.0% |
| ! | GCATCATTGAAATTATACAA+TGG | - | chr7.1:85340297-85340316 | None:intergenic | 25.0% |
| ! | TGTAAAATAGGTGGAATATT+AGG | + | chr7.1:85339540-85339559 | MS.gene92819:intron | 25.0% |
| ! | TTATCATATTTGTTCTGTTC+TGG | + | chr7.1:85340500-85340519 | MS.gene92819:intron | 25.0% |
| ! | TTGAATTCATCTATGTTAGT+TGG | - | chr7.1:85339724-85339743 | None:intergenic | 25.0% |
| ! | TTGTCTGTGTTATGTAAAAT+AGG | + | chr7.1:85339528-85339547 | MS.gene92819:intron | 25.0% |
| AAGTGTCAAGATTATATGCA+GGG | - | chr7.1:85340370-85340389 | None:intergenic | 30.0% | |
| CAAACTATCTCTTCTGTAAT+AGG | - | chr7.1:85339883-85339902 | None:intergenic | 30.0% | |
| CAACACAATATTCAATCAGA+TGG | - | chr7.1:85339852-85339871 | None:intergenic | 30.0% | |
| CAGTCACCAATAATTTAGAA+AGG | - | chr7.1:85340213-85340232 | None:intergenic | 30.0% | |
| GAATGTTCTTACTTCAATGT+TGG | + | chr7.1:85339643-85339662 | MS.gene92819:intron | 30.0% | |
| TCTGTGTTATGTAAAATAGG+TGG | + | chr7.1:85339531-85339550 | MS.gene92819:intron | 30.0% | |
| ! | AAAATTGATGATAGCGTCAA+AGG | - | chr7.1:85340094-85340113 | None:intergenic | 30.0% |
| ! | AAAGTGTCAAGATTATATGC+AGG | - | chr7.1:85340371-85340390 | None:intergenic | 30.0% |
| !!! | AAATGGGTTTGTGTTGTTTT+AGG | + | chr7.1:85339244-85339263 | MS.gene92819:intron | 30.0% |
| !!! | CTATTTTTTGCTCTTCAACA+AGG | - | chr7.1:85340750-85340769 | None:intergenic | 30.0% |
| !!! | CTTGCTTTTCTTTTGTTTTC+TGG | - | chr7.1:85340792-85340811 | None:intergenic | 30.0% |
| CAATTCTACAACATTGTGGA+AGG | + | chr7.1:85340316-85340335 | MS.gene92819:intron | 35.0% | |
| GATGCAATTCTACAACATTG+TGG | + | chr7.1:85340312-85340331 | MS.gene92819:intron | 35.0% | |
| TCATATAGATTCATACCCCT+TGG | - | chr7.1:85339342-85339361 | None:intergenic | 35.0% | |
| TGACAAAGAAGAACATTACC+AGG | - | chr7.1:85339120-85339139 | None:intergenic | 35.0% | |
| TTTGTTTGTACATGATGCTG+TGG | + | chr7.1:85339437-85339456 | MS.gene92819:intron | 35.0% | |
| ! | CAATTTTGTGAGGGACAATA+AGG | - | chr7.1:85340175-85340194 | None:intergenic | 35.0% |
| !!! | TGTTGTTTTAGGTGGAAAGT+TGG | + | chr7.1:85339255-85339274 | MS.gene92819:intron | 35.0% |
| AAACTTAGACGCTGTGTGAT+AGG | - | chr7.1:85340271-85340290 | None:intergenic | 40.0% | |
| ACAACTAAGAAGAGAGCTAG+TGG | + | chr7.1:85339286-85339305 | MS.gene92819:CDS | 40.0% | |
| ATAGCGTCAAAGGTCATAGT+TGG | - | chr7.1:85340084-85340103 | None:intergenic | 40.0% | |
| CTAGACCTCTTGTATTCAGT+AGG | - | chr7.1:85340554-85340573 | None:intergenic | 40.0% | |
| CTTCACAAACACAGCTGAAT+TGG | - | chr7.1:85339965-85339984 | None:intergenic | 40.0% | |
| TATTCAGTAGGTCTCAAGTG+TGG | - | chr7.1:85340542-85340561 | None:intergenic | 40.0% | |
| TGAGACCTACTGAATACAAG+AGG | + | chr7.1:85340546-85340565 | MS.gene92819:CDS | 40.0% | |
| TTACTGGAAAGAGGATCCAA+GGG | + | chr7.1:85339323-85339342 | MS.gene92819:CDS | 40.0% | |
| TTTCCAGTAACAGGACACTT+AGG | - | chr7.1:85339313-85339332 | None:intergenic | 40.0% | |
| TTTGTGAGGGACAATAAGGA+CGG | - | chr7.1:85340171-85340190 | None:intergenic | 40.0% | |
| !!! | GCTTATGGAGGTGTTTTATC+CGG | + | chr7.1:85340605-85340624 | MS.gene92819:CDS | 40.0% |
| !!! | TCATTGCTTTTTCTCCCTGA+TGG | + | chr7.1:85340425-85340444 | MS.gene92819:intron | 40.0% |
| !!! | TGGGTTTGTGTTGTTTTAGG+TGG | + | chr7.1:85339247-85339266 | MS.gene92819:intron | 40.0% |
| ACAAGAGGTCTAGATTGCCT+AGG | + | chr7.1:85340561-85340580 | MS.gene92819:CDS | 45.0% | |
| ACTGTTAACAGGGCTTATGG+AGG | + | chr7.1:85340593-85340612 | MS.gene92819:CDS | 45.0% | |
| AGTGCATGTCATGACCATCA+GGG | - | chr7.1:85340442-85340461 | None:intergenic | 45.0% | |
| AGTGTCCTGTTACTGGAAAG+AGG | + | chr7.1:85339314-85339333 | MS.gene92819:CDS | 45.0% | |
| CATAAGCCCTGTTAACAGTG+CGG | - | chr7.1:85340592-85340611 | None:intergenic | 45.0% | |
| CTTAACAACACGATGCTGGT+TGG | - | chr7.1:85339094-85339113 | None:intergenic | 45.0% | |
| GCTCTTCAACAAGGAAAGCA+CGG | - | chr7.1:85340741-85340760 | None:intergenic | 45.0% | |
| GTGTCTTAACAACACGATGC+TGG | - | chr7.1:85339098-85339117 | None:intergenic | 45.0% | |
| GTTACTGGAAAGAGGATCCA+AGG | + | chr7.1:85339322-85339341 | MS.gene92819:CDS | 45.0% | |
| TACTGGAAAGAGGATCCAAG+GGG | + | chr7.1:85339324-85339343 | MS.gene92819:CDS | 45.0% | |
| TGGATCCTCTTTCCAGTAAC+AGG | - | chr7.1:85339322-85339341 | None:intergenic | 45.0% | |
| TTCAGAGACTCACATACCGT+AGG | + | chr7.1:85339046-85339065 | MS.gene92819:CDS | 45.0% | |
| TTTATCCGGAGGAGCTGTTA+GGG | + | chr7.1:85340619-85340638 | MS.gene92819:CDS | 45.0% | |
| ! | AACACGATGCTGGTTGGATT+TGG | - | chr7.1:85339088-85339107 | None:intergenic | 45.0% |
| ! | CATCGTGTTGTTAAGACACC+TGG | + | chr7.1:85339099-85339118 | MS.gene92819:CDS | 45.0% |
| ! | TTTTATCCGGAGGAGCTGTT+AGG | + | chr7.1:85340618-85340637 | MS.gene92819:CDS | 45.0% |
| !!! | TATGGAGGTGTTTTATCCGG+AGG | + | chr7.1:85340608-85340627 | MS.gene92819:CDS | 45.0% |
| CGCACTGTTAACAGGGCTTA+TGG | + | chr7.1:85340590-85340609 | MS.gene92819:CDS | 50.0% | |
| GAGTGCATGTCATGACCATC+AGG | - | chr7.1:85340443-85340462 | None:intergenic | 50.0% | |
| GGACCTAAGTGTCCTGTTAC+TGG | + | chr7.1:85339307-85339326 | MS.gene92819:CDS | 50.0% | |
| GTCTCAAGTGTGGAATCTGC+AGG | - | chr7.1:85340532-85340551 | None:intergenic | 50.0% | |
| TGGCATAGCTGTGTCTCCTA+CGG | - | chr7.1:85339065-85339084 | None:intergenic | 50.0% | |
| ! | ACGATGCTGGTTGGATTTGG+TGG | - | chr7.1:85339085-85339104 | None:intergenic | 50.0% |
| AAGCCCTGTTAACAGTGCGG+CGG | - | chr7.1:85340589-85340608 | None:intergenic | 55.0% | |
| CCTTTCCCTAACAGCTCCTC+CGG | - | chr7.1:85340627-85340646 | None:intergenic | 55.0% | |
| GAACCGCCGCACTGTTAACA+GGG | + | chr7.1:85340583-85340602 | MS.gene92819:CDS | 55.0% | |
| TTAACAGTGCGGCGGTTCCT+AGG | - | chr7.1:85340581-85340600 | None:intergenic | 55.0% | |
| CCGGAGGAGCTGTTAGGGAA+AGG | + | chr7.1:85340624-85340643 | MS.gene92819:CDS | 60.0% | |
| GGAACCGCCGCACTGTTAAC+AGG | + | chr7.1:85340582-85340601 | MS.gene92819:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 85339042 | 85340825 | 85339042 | ID=MS.gene92819 |
| chr7.1 | mRNA | 85339042 | 85340825 | 85339042 | ID=MS.gene92819.t1;Parent=MS.gene92819 |
| chr7.1 | exon | 85339042 | 85339120 | 85339042 | ID=MS.gene92819.t1.exon1;Parent=MS.gene92819.t1 |
| chr7.1 | CDS | 85339042 | 85339120 | 85339042 | ID=cds.MS.gene92819.t1;Parent=MS.gene92819.t1 |
| chr7.1 | exon | 85339266 | 85339345 | 85339266 | ID=MS.gene92819.t1.exon2;Parent=MS.gene92819.t1 |
| chr7.1 | CDS | 85339266 | 85339345 | 85339266 | ID=cds.MS.gene92819.t1;Parent=MS.gene92819.t1 |
| chr7.1 | exon | 85340536 | 85340645 | 85340536 | ID=MS.gene92819.t1.exon3;Parent=MS.gene92819.t1 |
| chr7.1 | CDS | 85340536 | 85340645 | 85340536 | ID=cds.MS.gene92819.t1;Parent=MS.gene92819.t1 |
| chr7.1 | exon | 85340732 | 85340825 | 85340732 | ID=MS.gene92819.t1.exon4;Parent=MS.gene92819.t1 |
| chr7.1 | CDS | 85340732 | 85340825 | 85340732 | ID=cds.MS.gene92819.t1;Parent=MS.gene92819.t1 |
| Gene Sequence |
| Protein sequence |
