Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95070.t1 | XP_013467098.1 | 90.7 | 460 | 24 | 9 | 1 | 454 | 1 | 447 | 5.50E-228 | 800 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95070.t1 | Q8L627 | 53.9 | 319 | 133 | 6 | 137 | 454 | 70 | 375 | 4.8e-87 | 323.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95070.t1 | I3S3I2 | 90.7 | 460 | 24 | 9 | 1 | 454 | 1 | 447 | 4.0e-228 | 800.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049151 | MS.gene95070 | 0.812209 | 4.76E-51 | -1.69E-46 |
| MS.gene049230 | MS.gene95070 | 0.843816 | 1.11E-58 | -1.69E-46 |
| MS.gene049378 | MS.gene95070 | 0.827332 | 1.66E-54 | -1.69E-46 |
| MS.gene049424 | MS.gene95070 | 0.849698 | 2.74E-60 | -1.69E-46 |
| MS.gene049915 | MS.gene95070 | 0.803878 | 2.83E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene95070 | 0.832601 | 8.61E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene95070 | 0.836701 | 8.02E-57 | -1.69E-46 |
| MS.gene050228 | MS.gene95070 | 0.84054 | 8.17E-58 | -1.69E-46 |
| MS.gene050442 | MS.gene95070 | 0.814019 | 1.91E-51 | -1.69E-46 |
| MS.gene050605 | MS.gene95070 | 0.800121 | 1.67E-48 | -1.69E-46 |
| MS.gene050623 | MS.gene95070 | -0.837234 | 5.86E-57 | -1.69E-46 |
| MS.gene050642 | MS.gene95070 | 0.832793 | 7.72E-56 | -1.69E-46 |
| MS.gene050750 | MS.gene95070 | 0.815073 | 1.11E-51 | -1.69E-46 |
| MS.gene050953 | MS.gene95070 | 0.828433 | 9.02E-55 | -1.69E-46 |
| MS.gene050987 | MS.gene95070 | 0.841262 | 5.29E-58 | -1.69E-46 |
| MS.gene051349 | MS.gene95070 | 0.803416 | 3.52E-49 | -1.69E-46 |
| MS.gene051370 | MS.gene95070 | 0.803397 | 3.55E-49 | -1.69E-46 |
| MS.gene051373 | MS.gene95070 | 0.801313 | 9.55E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene95070 | 0.832366 | 9.85E-56 | -1.69E-46 |
| MS.gene051983 | MS.gene95070 | 0.853786 | 1.90E-61 | -1.69E-46 |
| MS.gene052077 | MS.gene95070 | 0.804115 | 2.52E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene95070 | 0.853149 | 2.89E-61 | -1.69E-46 |
| MS.gene052302 | MS.gene95070 | 0.819845 | 9.38E-53 | -1.69E-46 |
| MS.gene052309 | MS.gene95070 | -0.836648 | 8.27E-57 | -1.69E-46 |
| MS.gene052376 | MS.gene95070 | 0.827819 | 1.27E-54 | -1.69E-46 |
| MS.gene052426 | MS.gene95070 | 0.828722 | 7.67E-55 | -1.69E-46 |
| MS.gene052500 | MS.gene95070 | 0.80566 | 1.20E-49 | -1.69E-46 |
| MS.gene052502 | MS.gene95070 | 0.808532 | 2.96E-50 | -1.69E-46 |
| MS.gene052826 | MS.gene95070 | 0.810561 | 1.08E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene95070 | 0.81059 | 1.07E-50 | -1.69E-46 |
| MS.gene052858 | MS.gene95070 | 0.805038 | 1.62E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene95070 | 0.800746 | 1.25E-48 | -1.69E-46 |
| MS.gene053188 | MS.gene95070 | 0.838956 | 2.11E-57 | -1.69E-46 |
| MS.gene053216 | MS.gene95070 | 0.875246 | 3.58E-68 | -1.69E-46 |
| MS.gene054405 | MS.gene95070 | 0.813098 | 3.04E-51 | -1.69E-46 |
| MS.gene054537 | MS.gene95070 | 0.844402 | 7.73E-59 | -1.69E-46 |
| MS.gene054657 | MS.gene95070 | 0.80164 | 8.19E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene95070 | 0.86119 | 1.22E-63 | -1.69E-46 |
| MS.gene054942 | MS.gene95070 | 0.802989 | 4.32E-49 | -1.69E-46 |
| MS.gene05510 | MS.gene95070 | 0.829354 | 5.40E-55 | -1.69E-46 |
| MS.gene055441 | MS.gene95070 | 0.827373 | 1.62E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene95070 | 0.825578 | 4.34E-54 | -1.69E-46 |
| MS.gene056087 | MS.gene95070 | 0.82753 | 1.49E-54 | -1.69E-46 |
| MS.gene056506 | MS.gene95070 | 0.845523 | 3.85E-59 | -1.69E-46 |
| MS.gene056849 | MS.gene95070 | 0.837905 | 3.94E-57 | -1.69E-46 |
| MS.gene056979 | MS.gene95070 | 0.848498 | 5.90E-60 | -1.69E-46 |
| MS.gene057079 | MS.gene95070 | 0.844524 | 7.17E-59 | -1.69E-46 |
| MS.gene057194 | MS.gene95070 | 0.804324 | 2.28E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene95070 | 0.838883 | 2.21E-57 | -1.69E-46 |
| MS.gene057750 | MS.gene95070 | 0.801734 | 7.83E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene95070 | 0.812364 | 4.40E-51 | -1.69E-46 |
| MS.gene05795 | MS.gene95070 | 0.831486 | 1.62E-55 | -1.69E-46 |
| MS.gene058142 | MS.gene95070 | 0.811652 | 6.29E-51 | -1.69E-46 |
| MS.gene058146 | MS.gene95070 | 0.80342 | 3.52E-49 | -1.69E-46 |
| MS.gene058399 | MS.gene95070 | 0.833651 | 4.72E-56 | -1.69E-46 |
| MS.gene058435 | MS.gene95070 | 0.820562 | 6.42E-53 | -1.69E-46 |
| MS.gene059128 | MS.gene95070 | 0.800315 | 1.53E-48 | -1.69E-46 |
| MS.gene059317 | MS.gene95070 | 0.825167 | 5.43E-54 | -1.69E-46 |
| MS.gene059830 | MS.gene95070 | 0.802278 | 6.05E-49 | -1.69E-46 |
| MS.gene059899 | MS.gene95070 | 0.818558 | 1.84E-52 | -1.69E-46 |
| MS.gene060084 | MS.gene95070 | 0.857363 | 1.72E-62 | -1.69E-46 |
| MS.gene060297 | MS.gene95070 | 0.884915 | 1.28E-71 | -1.69E-46 |
| MS.gene060683 | MS.gene95070 | 0.829713 | 4.41E-55 | -1.69E-46 |
| MS.gene060685 | MS.gene95070 | 0.813923 | 2.00E-51 | -1.69E-46 |
| MS.gene060998 | MS.gene95070 | 0.801239 | 9.89E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene95070 | -0.806672 | 7.34E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95070.t1 | MTR_1g043000 | 90.652 | 460 | 24 | 9 | 1 | 454 | 1 | 447 | 0.0 | 830 |
| MS.gene95070.t1 | MTR_4g134340 | 88.352 | 455 | 35 | 6 | 1 | 454 | 1 | 438 | 0.0 | 815 |
| MS.gene95070.t1 | MTR_4g134340 | 87.473 | 455 | 32 | 7 | 1 | 454 | 1 | 431 | 0.0 | 801 |
| MS.gene95070.t1 | MTR_4g134340 | 85.873 | 361 | 33 | 6 | 1 | 360 | 1 | 344 | 0.0 | 610 |
| MS.gene95070.t1 | MTR_4g064230 | 84.946 | 372 | 28 | 10 | 1 | 367 | 1 | 349 | 0.0 | 603 |
| MS.gene95070.t1 | MTR_8g042940 | 68.610 | 446 | 102 | 8 | 17 | 454 | 8 | 423 | 0.0 | 593 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95070.t1 | AT1G28560 | 46.272 | 456 | 206 | 10 | 23 | 454 | 22 | 462 | 2.00e-127 | 377 |
| MS.gene95070.t1 | AT1G28560 | 51.020 | 343 | 149 | 7 | 113 | 454 | 51 | 375 | 3.15e-111 | 333 |
| MS.gene95070.t1 | AT1G28560 | 51.020 | 343 | 149 | 7 | 113 | 454 | 62 | 386 | 5.71e-111 | 333 |
Find 98 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGGGAATATATTATAAA+TGG | 0.182807 | 8.2:+500105 | MS.gene95070:CDS |
| GAAACAACAACAAGTCTTTC+AGG | 0.206736 | 8.2:+498972 | MS.gene95070:CDS |
| ATATGTCTGGCCCAATTGTT+AGG | 0.268431 | 8.2:+498809 | MS.gene95070:CDS |
| AGACATATTGGAGACGTAAA+TGG | 0.290839 | 8.2:-498794 | None:intergenic |
| CGATGAATTGGAATTGGAAT+TGG | 0.317249 | 8.2:+498720 | MS.gene95070:CDS |
| GGTCAACACAATGGCTCTTC+AGG | 0.336128 | 8.2:+499560 | MS.gene95070:intron |
| ACCCAAGAGCTGTTAGTTCT+TGG | 0.341773 | 8.2:+499811 | MS.gene95070:CDS |
| CTTGCTTTAGTCCTGATTCC+AGG | 0.346091 | 8.2:+499367 | MS.gene95070:intron |
| TCAAAGCCATGTCCATTAAC+TGG | 0.348465 | 8.2:-498951 | None:intergenic |
| AATAATGGATGACGATGAAT+TGG | 0.349436 | 8.2:+498708 | None:intergenic |
| AACAATTGGGCCAGACATAT+TGG | 0.350363 | 8.2:-498806 | None:intergenic |
| TTGGAATTGGAATGTTCAAT+TGG | 0.350971 | 8.2:+498733 | MS.gene95070:CDS |
| AATGGGAATATATTATAAAT+GGG | 0.355592 | 8.2:+500106 | MS.gene95070:CDS |
| TTTCTTCTGTGCCTCCTCCT+TGG | 0.362628 | 8.2:-500085 | None:intergenic |
| ATGCCGATGATGTACAGAAT+TGG | 0.370973 | 8.2:+501781 | MS.gene95070:CDS |
| TTCAGTTGAAAAGTGACAAT+TGG | 0.371285 | 8.2:-501813 | None:intergenic |
| CTCAAAGGATGATGTCTCTT+AGG | 0.383507 | 8.2:+499427 | MS.gene95070:CDS |
| AACTCTGCTGCTGCAGCATT+AGG | 0.385029 | 8.2:-499024 | None:intergenic |
| GCTGGCCAACATGACCCTTC+TGG | 0.386308 | 8.2:+499898 | MS.gene95070:CDS |
| AGGAGGAGGCACAGAAGAAA+TGG | 0.394153 | 8.2:+500088 | MS.gene95070:CDS |
| TTTACAATTACTATCAAGAA+TGG | 0.394641 | 8.2:-499185 | None:intergenic |
| GGATGACGATGAATTGGAAT+TGG | 0.402520 | 8.2:+498714 | MS.gene95070:CDS |
| CACCAAGAACTAACAGCTCT+TGG | 0.403372 | 8.2:-499813 | None:intergenic |
| AAAAGAGGAACCCTAACAAT+TGG | 0.405666 | 8.2:-498820 | None:intergenic |
| GATTGATTGATCCTGGAATC+AGG | 0.410653 | 8.2:-499378 | None:intergenic |
| GTCAGAATAACAAGCTCTTC+AGG | 0.418838 | 8.2:+499137 | MS.gene95070:CDS |
| TGATAGTAATTGTAAAGAAA+AGG | 0.442398 | 8.2:+499192 | MS.gene95070:CDS |
| TGGATACCTTTATTGTCATC+AGG | 0.448523 | 8.2:+500248 | MS.gene95070:CDS |
| AAACAACAACAAGTCTTTCA+GGG | 0.453600 | 8.2:+498973 | MS.gene95070:CDS |
| CCAGAACTTATCTGTATTGA+GGG | 0.458583 | 8.2:+499837 | MS.gene95070:CDS |
| TCATGATCATGATTCGAATC+AGG | 0.459373 | 8.2:-498892 | None:intergenic |
| TATCTCGTATTACTAAGGTA+TGG | 0.460471 | 8.2:-501746 | None:intergenic |
| AAAGTACCTGATGACAATAA+AGG | 0.462826 | 8.2:-500254 | None:intergenic |
| CCCTCAATACAGATAAGTTC+TGG | 0.465397 | 8.2:-499837 | None:intergenic |
| CATCCTCTGCTAGGTGAAGA+AGG | 0.470985 | 8.2:-501947 | None:intergenic |
| GTTGGCAGATTGATTGATCC+TGG | 0.476704 | 8.2:-499385 | None:intergenic |
| AGGTCACTGTGGATGACAAA+TGG | 0.479331 | 8.2:+501883 | MS.gene95070:CDS |
| AACCTTTGTGGCAGAACTTG+TGG | 0.482472 | 8.2:-499451 | None:intergenic |
| TTACAATTACTATCAAGAAT+GGG | 0.489599 | 8.2:-499184 | None:intergenic |
| CTTCTTCACCTAGCAGAGGA+TGG | 0.493676 | 8.2:+501948 | MS.gene95070:CDS |
| GACATATTGGAGACGTAAAT+GGG | 0.500992 | 8.2:-498793 | None:intergenic |
| CCTCATATCTCGTATTACTA+AGG | 0.501935 | 8.2:-501751 | None:intergenic |
| CAAGAGCTGTTAGTTCTTGG+TGG | 0.503983 | 8.2:+499814 | MS.gene95070:CDS |
| TGCCGATGATGTACAGAATT+GGG | 0.506290 | 8.2:+501782 | MS.gene95070:CDS |
| AATGGGTTTATTTGTTCGAC+GGG | 0.510441 | 8.2:-499167 | None:intergenic |
| GCCAGAACTTATCTGTATTG+AGG | 0.512945 | 8.2:+499836 | MS.gene95070:CDS |
| ACCAAGAACTAACAGCTCTT+GGG | 0.513479 | 8.2:-499812 | None:intergenic |
| AAAGAGGAACCCTAACAATT+GGG | 0.516740 | 8.2:-498819 | None:intergenic |
| CCCCTCGGAATTGAGATTGA+AGG | 0.518085 | 8.2:-498766 | None:intergenic |
| AAGCCAATCGAGTATGGGTC+TGG | 0.519776 | 8.2:-500055 | None:intergenic |
| TTCCCTTCTTCACCTAGCAG+AGG | 0.521159 | 8.2:+501944 | MS.gene95070:CDS |
| TATGTCTGGCCCAATTGTTA+GGG | 0.523102 | 8.2:+498810 | MS.gene95070:CDS |
| CCTTAGTAATACGAGATATG+AGG | 0.530354 | 8.2:+501751 | MS.gene95070:CDS |
| ATTTACGTCTCCAATATGTC+TGG | 0.531439 | 8.2:+498796 | MS.gene95070:CDS |
| TCAGGAGCACATACCTGTGC+AGG | 0.532269 | 8.2:+499578 | MS.gene95070:CDS |
| TGACCAGACCCATACTCGAT+TGG | 0.536263 | 8.2:+500052 | MS.gene95070:CDS |
| ACACAAGCAGGAGGAAGATA+AGG | 0.539279 | 8.2:+499237 | MS.gene95070:CDS |
| ATCTCGTATTACTAAGGTAT+GGG | 0.540723 | 8.2:-501745 | None:intergenic |
| AGACTAACAACAATTAATCA+TGG | 0.540971 | 8.2:-502010 | None:intergenic |
| TTGTAAAGAAAAGGTGGAGG+AGG | 0.547523 | 8.2:+499201 | MS.gene95070:CDS |
| GAATGGGTTTATTTGTTCGA+CGG | 0.551185 | 8.2:-499168 | None:intergenic |
| ACGTAAATGGGTCCACCCCT+CGG | 0.551378 | 8.2:-498781 | None:intergenic |
| GGAGGAGGCACAGAAGAAAT+GGG | 0.551959 | 8.2:+500089 | MS.gene95070:CDS |
| CAAAATATTCAGAGCTACAA+AGG | 0.552654 | 8.2:+501863 | MS.gene95070:CDS |
| GATCAATTGCTCAACGGACC+AGG | 0.552708 | 8.2:+499864 | MS.gene95070:CDS |
| AGAATTTAGGAGAACCTTTG+TGG | 0.559405 | 8.2:-499463 | None:intergenic |
| ATGGAGAGCCATCCTCTGCT+AGG | 0.564427 | 8.2:-501956 | None:intergenic |
| TAGTAATTGTAAAGAAAAGG+TGG | 0.567221 | 8.2:+499195 | MS.gene95070:CDS |
| CTGGTCAAATCAATAGCAGA+TGG | 0.567575 | 8.2:-500036 | None:intergenic |
| TGTCAGAATCAAACACAAGC+AGG | 0.569616 | 8.2:+499225 | MS.gene95070:CDS |
| TCCTTCAATCTCAATTCCGA+GGG | 0.576834 | 8.2:+498765 | MS.gene95070:CDS |
| TCAATCTCAATTCCGAGGGG+TGG | 0.580163 | 8.2:+498769 | MS.gene95070:CDS |
| CAAAATCAATCAAAACTCAA+AGG | 0.581709 | 8.2:+499412 | MS.gene95070:CDS |
| TCAATTAGAAAATAACCAGA+AGG | 0.582127 | 8.2:-499913 | None:intergenic |
| TCTGCTGCTGCAGCATTAGG+AGG | 0.582300 | 8.2:-499021 | None:intergenic |
| ATGGGAATATATTATAAATG+GGG | 0.585026 | 8.2:+500107 | MS.gene95070:CDS |
| AGCCCAATTCTGTACATCAT+CGG | 0.585350 | 8.2:-501784 | None:intergenic |
| ATCCTTCAATCTCAATTCCG+AGG | 0.585910 | 8.2:+498764 | MS.gene95070:CDS |
| AATAACCAGAAGGGTCATGT+TGG | 0.592815 | 8.2:-499903 | None:intergenic |
| ATAATCATATTCTATGAAGT+CGG | 0.597290 | 8.2:-501985 | None:intergenic |
| ATCCTCTGCTAGGTGAAGAA+GGG | 0.601005 | 8.2:-501946 | None:intergenic |
| ACAACTTCTGAATCCTGCAC+AGG | 0.605667 | 8.2:-499591 | None:intergenic |
| GCTTCAAAACTCCAAGGAGG+AGG | 0.606372 | 8.2:+500074 | MS.gene95070:CDS |
| GTCCACAAGTTCTGCCACAA+AGG | 0.606734 | 8.2:+499449 | MS.gene95070:CDS |
| CGATTGGCTTCAAAACTCCA+AGG | 0.623497 | 8.2:+500068 | MS.gene95070:CDS |
| TGAGGACCAGTTAATGGACA+TGG | 0.631627 | 8.2:+498945 | MS.gene95070:CDS |
| TAATTGTAAAGAAAAGGTGG+AGG | 0.637738 | 8.2:+499198 | MS.gene95070:CDS |
| TCTATGAAGTCGGTATACGA+TGG | 0.646588 | 8.2:-501975 | None:intergenic |
| TGTTTCACAGGTCAACACAA+TGG | 0.647779 | 8.2:+499551 | MS.gene95070:intron |
| TGATCATGATTCGAATCAGG+AGG | 0.661526 | 8.2:-498889 | None:intergenic |
| ATCTCAAAAGATGCAAAACG+AGG | 0.663023 | 8.2:-500183 | None:intergenic |
| AAAACAAAAGGCAATTGTCG+GGG | 0.664942 | 8.2:+500140 | MS.gene95070:CDS |
| CAGAATCAAACACAAGCAGG+AGG | 0.676879 | 8.2:+499228 | MS.gene95070:CDS |
| CAATTAGAAAATAACCAGAA+GGG | 0.677062 | 8.2:-499912 | None:intergenic |
| GGACAAGATCAATTGCTCAA+CGG | 0.684391 | 8.2:+499858 | MS.gene95070:CDS |
| CAGAGCTACAAAGGTCACTG+TGG | 0.721614 | 8.2:+501872 | MS.gene95070:CDS |
| CCTTCAATCTCAATTCCGAG+GGG | 0.754073 | 8.2:+498766 | MS.gene95070:CDS |
| TTGGCTTCAAAACTCCAAGG+AGG | 0.756414 | 8.2:+500071 | MS.gene95070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGCAAAAAATTAAAAAAA+TGG | - | chr8.2:500321-500340 | None:intergenic | 10.0% |
| !! | AATAATAATAATGAAAAAAG+AGG | - | chr8.2:499065-499084 | None:intergenic | 10.0% |
| !! | ATAATAATAATGAAAAAAGA+GGG | - | chr8.2:499064-499083 | None:intergenic | 10.0% |
| !! | TAAGAAAACAATTATAAATT+TGG | - | chr8.2:501672-501691 | None:intergenic | 10.0% |
| !!! | AATTATTATTTTGATTATGT+AGG | - | chr8.2:499696-499715 | None:intergenic | 10.0% |
| !!! | CTTTATTTTTCTTTAATTTT+GGG | + | chr8.2:500802-500821 | MS.gene95070:intron | 10.0% |
| !!! | TCTTTATTTTTCTTTAATTT+TGG | + | chr8.2:500801-500820 | MS.gene95070:intron | 10.0% |
| !!! | TTAATTTTTTGCTTTAAATT+TGG | + | chr8.2:500326-500345 | MS.gene95070:intron | 10.0% |
| !!! | TTTATTTTTCTTTAATTTTG+GGG | + | chr8.2:500803-500822 | MS.gene95070:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8.2:500975-500994 | None:intergenic | 100.0% |
| !! | AAATGGGAATATATTATAAA+TGG | + | chr8.2:500105-500124 | MS.gene95070:CDS | 15.0% |
| !! | AAATTGTATTATTGAATGAT+AGG | - | chr8.2:501484-501503 | None:intergenic | 15.0% |
| !! | AATGGGAATATATTATAAAT+GGG | + | chr8.2:500106-500125 | MS.gene95070:CDS | 15.0% |
| !! | AGTATTATAAAAATATGGAA+AGG | - | chr8.2:500879-500898 | None:intergenic | 15.0% |
| !! | ATGAAAAATAAACAAATATG+TGG | - | chr8.2:501515-501534 | None:intergenic | 15.0% |
| !!! | ATAATTGTTTTCTTAGAAAT+TGG | + | chr8.2:501677-501696 | MS.gene95070:intron | 15.0% |
| !!! | TCTCCTTTTAATTTATATAT+TGG | - | chr8.2:501573-501592 | None:intergenic | 15.0% |
| !!! | TTATTTTTCTTTAATTTTGG+GGG | + | chr8.2:500804-500823 | MS.gene95070:intron | 15.0% |
| !!! | TTCATTTTCAAAATGAATTT+TGG | + | chr8.2:499719-499738 | MS.gene95070:intron | 15.0% |
| !!! | TTTCTTTTTCTTTTTCTTTT+GGG | + | chr8.2:499785-499804 | MS.gene95070:intron | 15.0% |
| !!! | TTTTCTTTTTCTTTTTCTTT+TGG | + | chr8.2:499784-499803 | MS.gene95070:intron | 15.0% |
| !! | AAAAAAAAATTGGGAAACTT+TGG | + | chr8.2:500829-500848 | MS.gene95070:intron | 20.0% |
| !! | ATAATCATATTCTATGAAGT+CGG | - | chr8.2:501988-502007 | None:intergenic | 20.0% |
| !! | ATCATTCATTAATTGATTAC+TGG | + | chr8.2:499097-499116 | MS.gene95070:intron | 20.0% |
| !! | ATGGGAATATATTATAAATG+GGG | + | chr8.2:500107-500126 | MS.gene95070:CDS | 20.0% |
| !! | ATTCATCACAAAAATAACAA+GGG | - | chr8.2:501920-501939 | None:intergenic | 20.0% |
| !! | TGATAGTAATTGTAAAGAAA+AGG | + | chr8.2:499192-499211 | MS.gene95070:CDS | 20.0% |
| !! | TGGCCAATATATAAATTAAA+AGG | + | chr8.2:501567-501586 | MS.gene95070:intron | 20.0% |
| !! | TTACAATTACTATCAAGAAT+GGG | - | chr8.2:499187-499206 | None:intergenic | 20.0% |
| !! | TTTACAATTACTATCAAGAA+TGG | - | chr8.2:499188-499207 | None:intergenic | 20.0% |
| !!! | AAGATACATTTTTGTGATTT+AGG | + | chr8.2:500210-500229 | MS.gene95070:CDS | 20.0% |
| !!! | ATTTACCATAATTTTCGAAA+AGG | + | chr8.2:499627-499646 | MS.gene95070:CDS | 20.0% |
| !!! | ATTTTTGTGATTTAGGTTTT+CGG | + | chr8.2:500217-500236 | MS.gene95070:CDS | 20.0% |
| !!! | TATTAAACCATGTTGTTTAA+AGG | - | chr8.2:500650-500669 | None:intergenic | 20.0% |
| !!! | TTGGGAGTATTATAAAAATA+TGG | - | chr8.2:500884-500903 | None:intergenic | 20.0% |
| !!! | TTTGATTGATTTTGATTTGT+TGG | - | chr8.2:499406-499425 | None:intergenic | 20.0% |
| ! | AAAGATAAGGAATATGAAGA+TGG | - | chr8.2:499513-499532 | None:intergenic | 25.0% |
| ! | AAGAAAAAGAAAAAGAACAG+AGG | - | chr8.2:499777-499796 | None:intergenic | 25.0% |
| ! | AAGAAAAATAAAGACATGCA+AGG | - | chr8.2:500795-500814 | None:intergenic | 25.0% |
| ! | AAGTAAAAAATGCGAAACAT+TGG | - | chr8.2:500548-500567 | None:intergenic | 25.0% |
| ! | AATATGAAGATGGAAAAAAG+AGG | - | chr8.2:499503-499522 | None:intergenic | 25.0% |
| ! | ATTTATATATTGGCCAATGA+TGG | - | chr8.2:501563-501582 | None:intergenic | 25.0% |
| ! | CAAAATCAATCAAAACTCAA+AGG | + | chr8.2:499412-499431 | MS.gene95070:CDS | 25.0% |
| ! | CAATTAGAAAATAACCAGAA+GGG | - | chr8.2:499915-499934 | None:intergenic | 25.0% |
| ! | CATTAATTGATTACTGGATT+TGG | + | chr8.2:499103-499122 | MS.gene95070:intron | 25.0% |
| ! | CATTCATCACAAAAATAACA+AGG | - | chr8.2:501921-501940 | None:intergenic | 25.0% |
| ! | GCATTGTACTATTGTAAAAT+AGG | - | chr8.2:500408-500427 | None:intergenic | 25.0% |
| ! | GTAATGCATAGTAAGAATTT+AGG | - | chr8.2:499479-499498 | None:intergenic | 25.0% |
| ! | TAGTAATTGTAAAGAAAAGG+TGG | + | chr8.2:499195-499214 | MS.gene95070:CDS | 25.0% |
| ! | TATCATCAAAGTTAACATGT+AGG | + | chr8.2:499750-499769 | MS.gene95070:intron | 25.0% |
| ! | TATCTAACTGCAAAATTCTT+AGG | - | chr8.2:501373-501392 | None:intergenic | 25.0% |
| ! | TCAATTAGAAAATAACCAGA+AGG | - | chr8.2:499916-499935 | None:intergenic | 25.0% |
| ! | TTGGGGGTTAAAAAAAAATT+GGG | + | chr8.2:500820-500839 | MS.gene95070:intron | 25.0% |
| ! | TTGTATTATTGAATGATAGG+TGG | - | chr8.2:501481-501500 | None:intergenic | 25.0% |
| ! | TTTGGGGGTTAAAAAAAAAT+TGG | + | chr8.2:500819-500838 | MS.gene95070:intron | 25.0% |
| !! | TACTTTCTTTTATATGTCAC+AGG | + | chr8.2:500271-500290 | MS.gene95070:intron | 25.0% |
| !! | TGATCTTAAAGTTTTTACTG+AGG | + | chr8.2:498927-498946 | MS.gene95070:CDS | 25.0% |
| !!! | ACTAGTATTCTCTTTGTTTT+GGG | - | chr8.2:500902-500921 | None:intergenic | 25.0% |
| !!! | ATGTATTTTACACTGATTTG+AGG | + | chr8.2:500010-500029 | MS.gene95070:CDS | 25.0% |
| !!! | ATGTTCTTTAAGACATTGTT+GGG | + | chr8.2:500716-500735 | MS.gene95070:intron | 25.0% |
| !!! | TAATCTTTTTTCTGAGATTG+AGG | + | chr8.2:501104-501123 | MS.gene95070:intron | 25.0% |
| !!! | TGTATTTTACACTGATTTGA+GGG | + | chr8.2:500011-500030 | MS.gene95070:CDS | 25.0% |
| !!! | TTATTTTGATTATGTAGGCA+TGG | - | chr8.2:499691-499710 | None:intergenic | 25.0% |
| !!! | TTCTGGTTATTTTCTAATTG+AGG | + | chr8.2:499915-499934 | MS.gene95070:CDS | 25.0% |
| !!! | TTTTCATTGCTTCTGAAAAT+TGG | + | chr8.2:501528-501547 | MS.gene95070:intron | 25.0% |
| AAAAAATTGGGAAACTTTGG+AGG | + | chr8.2:500832-500851 | MS.gene95070:intron | 30.0% | |
| AAAAACAAAAGGCAATTGTC+GGG | + | chr8.2:500139-500158 | MS.gene95070:CDS | 30.0% | |
| AAAAATAAAGACATGCAAGG+TGG | - | chr8.2:500792-500811 | None:intergenic | 30.0% | |
| AAAAATTGGGAAACTTTGGA+GGG | + | chr8.2:500833-500852 | MS.gene95070:intron | 30.0% | |
| AAAATAAAGACATGCAAGGT+GGG | - | chr8.2:500791-500810 | None:intergenic | 30.0% | |
| AAACAACAACAAGTCTTTCA+GGG | + | chr8.2:498973-498992 | MS.gene95070:CDS | 30.0% | |
| ATCTCGTATTACTAAGGTAT+GGG | - | chr8.2:501748-501767 | None:intergenic | 30.0% | |
| ATTGGTTACACCAAAATTGA+TGG | - | chr8.2:500530-500549 | None:intergenic | 30.0% | |
| CAAAAACAAAAGGCAATTGT+CGG | + | chr8.2:500138-500157 | MS.gene95070:CDS | 30.0% | |
| CAAAATATTCAGAGCTACAA+AGG | + | chr8.2:501863-501882 | MS.gene95070:CDS | 30.0% | |
| CTTCTTCTTTAATGTTTCAC+AGG | + | chr8.2:499539-499558 | MS.gene95070:intron | 30.0% | |
| GAAGAAGAAGAAGAAAGATA+AGG | - | chr8.2:499526-499545 | None:intergenic | 30.0% | |
| TAATTGTAAAGAAAAGGTGG+AGG | + | chr8.2:499198-499217 | MS.gene95070:CDS | 30.0% | |
| TAGAAATTGGATCTTTAACG+TGG | + | chr8.2:501690-501709 | MS.gene95070:intron | 30.0% | |
| TATCTCGTATTACTAAGGTA+TGG | - | chr8.2:501749-501768 | None:intergenic | 30.0% | |
| TATTGAATGATAGGTGGAAT+TGG | - | chr8.2:501475-501494 | None:intergenic | 30.0% | |
| TGCTTATGAAATTTGTCTCA+TGG | + | chr8.2:500352-500371 | MS.gene95070:intron | 30.0% | |
| TGTTTGATGCAATGATAGAA+TGG | + | chr8.2:500458-500477 | MS.gene95070:intron | 30.0% | |
| TTAACATAGTCACTTCACTA+CGG | - | chr8.2:501072-501091 | None:intergenic | 30.0% | |
| TTCAGTTGAAAAGTGACAAT+TGG | - | chr8.2:501816-501835 | None:intergenic | 30.0% | |
| TTCCTTATACTATGGACAAA+CGG | - | chr8.2:501326-501345 | None:intergenic | 30.0% | |
| TTGGAATTGGAATGTTCAAT+TGG | + | chr8.2:498733-498752 | MS.gene95070:CDS | 30.0% | |
| TTGTCTCATGGTAATTGAAA+GGG | + | chr8.2:500364-500383 | MS.gene95070:intron | 30.0% | |
| TTTGTCTCATGGTAATTGAA+AGG | + | chr8.2:500363-500382 | MS.gene95070:intron | 30.0% | |
| ! | AAAGTACCTGATGACAATAA+AGG | - | chr8.2:500257-500276 | None:intergenic | 30.0% |
| ! | AAGATACGTTTTCAGAAATG+CGG | + | chr8.2:501834-501853 | MS.gene95070:CDS | 30.0% |
| ! | TGACACCTTTTCGAAAATTA+TGG | - | chr8.2:499635-499654 | None:intergenic | 30.0% |
| !! | CATGTTCTTTAAGACATTGT+TGG | + | chr8.2:500715-500734 | MS.gene95070:intron | 30.0% |
| !! | GACTAGTATTCTCTTTGTTT+TGG | - | chr8.2:500903-500922 | None:intergenic | 30.0% |
| !! | TTGTTTGGTTCCATCAATTT+TGG | + | chr8.2:500517-500536 | MS.gene95070:intron | 30.0% |
| !!! | AGAATATGTTTTGAGAGAGA+GGG | - | chr8.2:501005-501024 | None:intergenic | 30.0% |
| !!! | GAATACCTTTTTTTTGGCAT+TGG | - | chr8.2:499664-499683 | None:intergenic | 30.0% |
| !!! | GGCATTGAATACCTTTTTTT+TGG | - | chr8.2:499670-499689 | None:intergenic | 30.0% |
| !!! | GTTTGGAAGTGTTTTTAGAT+TGG | - | chr8.2:500945-500964 | None:intergenic | 30.0% |
| !!! | TAGAATATGTTTTGAGAGAG+AGG | - | chr8.2:501006-501025 | None:intergenic | 30.0% |
| AAAACAAAAGGCAATTGTCG+GGG | + | chr8.2:500140-500159 | MS.gene95070:CDS | 35.0% | |
| AAAACACTTCCAAACCTTGT+TGG | + | chr8.2:500950-500969 | MS.gene95070:intron | 35.0% | |
| AAAAGAGGAACCCTAACAAT+TGG | - | chr8.2:498823-498842 | None:intergenic | 35.0% | |
| AAACACTTCCAAACCTTGTT+GGG | + | chr8.2:500951-500970 | MS.gene95070:intron | 35.0% | |
| AAAGAGGAACCCTAACAATT+GGG | - | chr8.2:498822-498841 | None:intergenic | 35.0% | |
| AAATAAAGACATGCAAGGTG+GGG | - | chr8.2:500790-500809 | None:intergenic | 35.0% | |
| AAATACATCCTGCAAGAAAC+TGG | - | chr8.2:499998-500017 | None:intergenic | 35.0% | |
| AACCGTTTGTCCATAGTATA+AGG | + | chr8.2:501321-501340 | MS.gene95070:intron | 35.0% | |
| AATAGTGATCTCGTTACAAG+AGG | - | chr8.2:499956-499975 | None:intergenic | 35.0% | |
| AATCAGGACTAAAGCAAGAT+AGG | - | chr8.2:499365-499384 | None:intergenic | 35.0% | |
| AGAAGTGAATCCTGAAAAAG+AGG | - | chr8.2:498838-498857 | None:intergenic | 35.0% | |
| AGAATTTAGGAGAACCTTTG+TGG | - | chr8.2:499466-499485 | None:intergenic | 35.0% | |
| AGACATATTGGAGACGTAAA+TGG | - | chr8.2:498797-498816 | None:intergenic | 35.0% | |
| AGACATTGTTGGGAAGTTAT+AGG | + | chr8.2:500726-500745 | MS.gene95070:intron | 35.0% | |
| AGCACTACCTTTAAACAACA+TGG | + | chr8.2:500640-500659 | MS.gene95070:intron | 35.0% | |
| AGCACTAGCAAACTTGAAAA+GGG | + | chr8.2:501603-501622 | MS.gene95070:intron | 35.0% | |
| AGTAAGCAATAGCTTCCTAT+AGG | + | chr8.2:501398-501417 | MS.gene95070:intron | 35.0% | |
| AGTATAAGGAATGAAGACGT+GGG | + | chr8.2:501335-501354 | MS.gene95070:intron | 35.0% | |
| ATAGTGATCTCGTTACAAGA+GGG | - | chr8.2:499955-499974 | None:intergenic | 35.0% | |
| ATCTCAAAAGATGCAAAACG+AGG | - | chr8.2:500186-500205 | None:intergenic | 35.0% | |
| ATGGTCTCATTCTTTCACTA+TGG | - | chr8.2:501038-501057 | None:intergenic | 35.0% | |
| ATTTACGTCTCCAATATGTC+TGG | + | chr8.2:498796-498815 | MS.gene95070:CDS | 35.0% | |
| CAAAAATAACAAGGGTTGTC+TGG | - | chr8.2:501912-501931 | None:intergenic | 35.0% | |
| CCAGAACTTATCTGTATTGA+GGG | + | chr8.2:499837-499856 | MS.gene95070:CDS | 35.0% | |
| CCTCATATCTCGTATTACTA+AGG | - | chr8.2:501754-501773 | None:intergenic | 35.0% | |
| CCTTAGTAATACGAGATATG+AGG | + | chr8.2:501751-501770 | MS.gene95070:CDS | 35.0% | |
| CGATGAATTGGAATTGGAAT+TGG | + | chr8.2:498720-498739 | MS.gene95070:CDS | 35.0% | |
| CGTCTTCATTCCTTATACTA+TGG | - | chr8.2:501334-501353 | None:intergenic | 35.0% | |
| GAAACAACAACAAGTCTTTC+AGG | + | chr8.2:498972-498991 | MS.gene95070:CDS | 35.0% | |
| GACATATTGGAGACGTAAAT+GGG | - | chr8.2:498796-498815 | None:intergenic | 35.0% | |
| GCTATCCAATGCCAAAAAAA+AGG | + | chr8.2:499656-499675 | MS.gene95070:CDS | 35.0% | |
| GGAACTACAGCAAAAACAAA+AGG | + | chr8.2:500128-500147 | MS.gene95070:CDS | 35.0% | |
| GGTGACTCTAAGTAAAATTG+TGG | + | chr8.2:501274-501293 | MS.gene95070:intron | 35.0% | |
| TAAAGCAAGATAGGTGAATC+AGG | - | chr8.2:499356-499375 | None:intergenic | 35.0% | |
| TAGCACTAGCAAACTTGAAA+AGG | + | chr8.2:501602-501621 | MS.gene95070:intron | 35.0% | |
| TAGTATAAGGAATGAAGACG+TGG | + | chr8.2:501334-501353 | MS.gene95070:intron | 35.0% | |
| TCATGATCATGATTCGAATC+AGG | - | chr8.2:498895-498914 | None:intergenic | 35.0% | |
| TGAGCACACAACAAAACATA+TGG | - | chr8.2:500621-500640 | None:intergenic | 35.0% | |
| TGGATACCTTTATTGTCATC+AGG | + | chr8.2:500248-500267 | MS.gene95070:CDS | 35.0% | |
| TGGTAATTGAAAGGGAAGTT+TGG | + | chr8.2:500372-500391 | MS.gene95070:intron | 35.0% | |
| TTGGATCCAATATGAACCAA+GGG | - | chr8.2:501200-501219 | None:intergenic | 35.0% | |
| TTTGGATCCAATATGAACCA+AGG | - | chr8.2:501201-501220 | None:intergenic | 35.0% | |
| ! | AATGGGTTTATTTGTTCGAC+GGG | - | chr8.2:499170-499189 | None:intergenic | 35.0% |
| ! | CTTTTCTGATTGAATCATGC+AGG | - | chr8.2:501143-501162 | None:intergenic | 35.0% |
| ! | GAATGGGTTTATTTGTTCGA+CGG | - | chr8.2:499171-499190 | None:intergenic | 35.0% |
| ! | TTTTACTGAGGACCAGTTAA+TGG | + | chr8.2:498939-498958 | MS.gene95070:CDS | 35.0% |
| !!! | AATATGTTTTGAGAGAGAGG+GGG | - | chr8.2:501003-501022 | None:intergenic | 35.0% |
| !!! | CACTACGGCTACTTTTTTTA+TGG | - | chr8.2:501057-501076 | None:intergenic | 35.0% |
| !!! | GAATATGTTTTGAGAGAGAG+GGG | - | chr8.2:501004-501023 | None:intergenic | 35.0% |
| !!! | TCTTTTTTCTGAGATTGAGG+TGG | + | chr8.2:501107-501126 | MS.gene95070:intron | 35.0% |
| !!! | TGGAAGTGTTTTTAGATTGG+AGG | - | chr8.2:500942-500961 | None:intergenic | 35.0% |
| !!! | TTTTGAAGCCAATCGAGTAT+GGG | - | chr8.2:500063-500082 | None:intergenic | 35.0% |
| AACAATTGGGCCAGACATAT+TGG | - | chr8.2:498809-498828 | None:intergenic | 40.0% | |
| AACTACGATGGTGTTTGATG+TGG | + | chr8.2:501646-501665 | MS.gene95070:intron | 40.0% | |
| AATAAAGACATGCAAGGTGG+GGG | - | chr8.2:500789-500808 | None:intergenic | 40.0% | |
| AATAACCAGAAGGGTCATGT+TGG | - | chr8.2:499906-499925 | None:intergenic | 40.0% | |
| ACAAAACACTCAGAGCTTGA+CGG | - | chr8.2:500501-500520 | None:intergenic | 40.0% | |
| ACAATGCCTCTCAAGTGAAA+AGG | + | chr8.2:500421-500440 | MS.gene95070:intron | 40.0% | |
| ACCAAGAACTAACAGCTCTT+GGG | - | chr8.2:499815-499834 | None:intergenic | 40.0% | |
| AGCCCAATTCTGTACATCAT+CGG | - | chr8.2:501787-501806 | None:intergenic | 40.0% | |
| AGGGGTAAAAGAGGGAAAAA+GGG | + | chr8.2:501252-501271 | MS.gene95070:intron | 40.0% | |
| ATATGTCTGGCCCAATTGTT+AGG | + | chr8.2:498809-498828 | MS.gene95070:CDS | 40.0% | |
| ATCCTTCAATCTCAATTCCG+AGG | + | chr8.2:498764-498783 | MS.gene95070:CDS | 40.0% | |
| ATGCCGATGATGTACAGAAT+TGG | + | chr8.2:501781-501800 | MS.gene95070:CDS | 40.0% | |
| ATGTTCTCTGTCTACTTGCA+GGG | + | chr8.2:501714-501733 | MS.gene95070:intron | 40.0% | |
| CATCAAACACCATCGTAGTT+AGG | - | chr8.2:501646-501665 | None:intergenic | 40.0% | |
| CATTGTTGGGAAGTTATAGG+AGG | + | chr8.2:500729-500748 | MS.gene95070:intron | 40.0% | |
| CCCTCAATACAGATAAGTTC+TGG | - | chr8.2:499840-499859 | None:intergenic | 40.0% | |
| CTCAAAGGATGATGTCTCTT+AGG | + | chr8.2:499427-499446 | MS.gene95070:CDS | 40.0% | |
| CTCTAAGTAAAATTGTGGCG+TGG | + | chr8.2:501279-501298 | MS.gene95070:intron | 40.0% | |
| CTGGTCAAATCAATAGCAGA+TGG | - | chr8.2:500039-500058 | None:intergenic | 40.0% | |
| GATTGATTGATCCTGGAATC+AGG | - | chr8.2:499381-499400 | None:intergenic | 40.0% | |
| GCCAGAACTTATCTGTATTG+AGG | + | chr8.2:499836-499855 | MS.gene95070:CDS | 40.0% | |
| GGACAAGATCAATTGCTCAA+CGG | + | chr8.2:499858-499877 | MS.gene95070:CDS | 40.0% | |
| GGATGACGATGAATTGGAAT+TGG | + | chr8.2:498714-498733 | MS.gene95070:CDS | 40.0% | |
| GTCAGAATAACAAGCTCTTC+AGG | + | chr8.2:499137-499156 | MS.gene95070:CDS | 40.0% | |
| TATGTCTGGCCCAATTGTTA+GGG | + | chr8.2:498810-498829 | MS.gene95070:CDS | 40.0% | |
| TCAAAGCCATGTCCATTAAC+TGG | - | chr8.2:498954-498973 | None:intergenic | 40.0% | |
| TCATTGAGACCTAACTACGA+TGG | + | chr8.2:501634-501653 | MS.gene95070:intron | 40.0% | |
| TCCTTCAATCTCAATTCCGA+GGG | + | chr8.2:498765-498784 | MS.gene95070:CDS | 40.0% | |
| TCTATGAAGTCGGTATACGA+TGG | - | chr8.2:501978-501997 | None:intergenic | 40.0% | |
| TCTTGATCTAGCGACAGTTA+TGG | - | chr8.2:500674-500693 | None:intergenic | 40.0% | |
| TGATCATGATTCGAATCAGG+AGG | - | chr8.2:498892-498911 | None:intergenic | 40.0% | |
| TGCCGATGATGTACAGAATT+GGG | + | chr8.2:501782-501801 | MS.gene95070:CDS | 40.0% | |
| TGTCAGAATCAAACACAAGC+AGG | + | chr8.2:499225-499244 | MS.gene95070:CDS | 40.0% | |
| TGTTTCACAGGTCAACACAA+TGG | + | chr8.2:499551-499570 | MS.gene95070:intron | 40.0% | |
| TTGGAATGTTTGCAGATTCG+AGG | - | chr8.2:501456-501475 | None:intergenic | 40.0% | |
| TTGGGAAGTTATAGGAGGAA+GGG | + | chr8.2:500734-500753 | MS.gene95070:intron | 40.0% | |
| TTGGTTCCTAACACCATCAT+TGG | + | chr8.2:501547-501566 | MS.gene95070:intron | 40.0% | |
| TTGTAAAGAAAAGGTGGAGG+AGG | + | chr8.2:499201-499220 | MS.gene95070:CDS | 40.0% | |
| ! | GATTCAATCAGAAAAGCACG+AGG | + | chr8.2:501147-501166 | MS.gene95070:intron | 40.0% |
| ! | GTTTTGCCTTTTCACTTGAG+AGG | - | chr8.2:500430-500449 | None:intergenic | 40.0% |
| ! | TATTGGCCAATGATGGTGTT+AGG | - | chr8.2:501556-501575 | None:intergenic | 40.0% |
| ! | TGTTAGGGTTCCTCTTTTTC+AGG | + | chr8.2:498825-498844 | MS.gene95070:CDS | 40.0% |
| !! | TGTGATTTAGGTTTTCGGCT+TGG | + | chr8.2:500222-500241 | MS.gene95070:CDS | 40.0% |
| !!! | ATATGTTTTGAGAGAGAGGG+GGG | - | chr8.2:501002-501021 | None:intergenic | 40.0% |
| !!! | CAAGCTCTGAGTGTTTTGTT+TGG | + | chr8.2:500502-500521 | MS.gene95070:intron | 40.0% |
| !!! | GTTTTGAAGCCAATCGAGTA+TGG | - | chr8.2:500064-500083 | None:intergenic | 40.0% |
| AACCTTTGTGGCAGAACTTG+TGG | - | chr8.2:499454-499473 | None:intergenic | 45.0% | |
| AAGTTATAGGAGGAAGGGAG+GGG | + | chr8.2:500739-500758 | MS.gene95070:intron | 45.0% | |
| ACAACTTCTGAATCCTGCAC+AGG | - | chr8.2:499594-499613 | None:intergenic | 45.0% | |
| ACACAAGCAGGAGGAAGATA+AGG | + | chr8.2:499237-499256 | MS.gene95070:CDS | 45.0% | |
| AGAGTAAACTCTCCACGCTA+TGG | - | chr8.2:501229-501248 | None:intergenic | 45.0% | |
| AGCAAGATAGGTGAATCAGG+AGG | - | chr8.2:499353-499372 | None:intergenic | 45.0% | |
| AGGTCACTGTGGATGACAAA+TGG | + | chr8.2:501883-501902 | MS.gene95070:CDS | 45.0% | |
| ATCCAAATAAGCCCATAGCG+TGG | + | chr8.2:501214-501233 | MS.gene95070:intron | 45.0% | |
| ATCCTCTGCTAGGTGAAGAA+GGG | - | chr8.2:501949-501968 | None:intergenic | 45.0% | |
| CACCAAGAACTAACAGCTCT+TGG | - | chr8.2:499816-499835 | None:intergenic | 45.0% | |
| CAGAATCAAACACAAGCAGG+AGG | + | chr8.2:499228-499247 | MS.gene95070:CDS | 45.0% | |
| CATGTTCTCTGTCTACTTGC+AGG | + | chr8.2:501713-501732 | MS.gene95070:intron | 45.0% | |
| CCTTCAATCTCAATTCCGAG+GGG | + | chr8.2:498766-498785 | MS.gene95070:CDS | 45.0% | |
| CTGTTAGAGCTGATCAGCTT+GGG | + | chr8.2:501174-501193 | MS.gene95070:intron | 45.0% | |
| CTTGCTTTAGTCCTGATTCC+AGG | + | chr8.2:499367-499386 | MS.gene95070:intron | 45.0% | |
| GAAGTTATAGGAGGAAGGGA+GGG | + | chr8.2:500738-500757 | MS.gene95070:intron | 45.0% | |
| GACCAGGTTATGCAAAAAGC+TGG | + | chr8.2:499880-499899 | MS.gene95070:CDS | 45.0% | |
| GAGGGGTAAAAGAGGGAAAA+AGG | + | chr8.2:501251-501270 | MS.gene95070:intron | 45.0% | |
| GAGTAAACTCTCCACGCTAT+GGG | - | chr8.2:501228-501247 | None:intergenic | 45.0% | |
| GGGGTAAAAGAGGGAAAAAG+GGG | + | chr8.2:501253-501272 | MS.gene95070:intron | 45.0% | |
| GTTGGCAGATTGATTGATCC+TGG | - | chr8.2:499388-499407 | None:intergenic | 45.0% | |
| GTTGGGAAGTTATAGGAGGA+AGG | + | chr8.2:500733-500752 | MS.gene95070:intron | 45.0% | |
| TAGCGTGGAGAGTTTACTCT+AGG | + | chr8.2:501229-501248 | MS.gene95070:intron | 45.0% | |
| TCTGTTAGAGCTGATCAGCT+TGG | + | chr8.2:501173-501192 | MS.gene95070:intron | 45.0% | |
| TTGGCTTCAAAACTCCAAGG+AGG | + | chr8.2:500071-500090 | MS.gene95070:CDS | 45.0% | |
| ! | ACCCAAGAGCTGTTAGTTCT+TGG | + | chr8.2:499811-499830 | MS.gene95070:CDS | 45.0% |
| ! | ACTCTAGGAGGGGTAAAAGA+GGG | + | chr8.2:501244-501263 | MS.gene95070:intron | 45.0% |
| ! | CAAGAGCTGTTAGTTCTTGG+TGG | + | chr8.2:499814-499833 | MS.gene95070:CDS | 45.0% |
| ! | GTGGAGAGTTTACTCTAGGA+GGG | + | chr8.2:501233-501252 | MS.gene95070:intron | 45.0% |
| ! | TACTCTAGGAGGGGTAAAAG+AGG | + | chr8.2:501243-501262 | MS.gene95070:intron | 45.0% |
| ! | TACTGGATTTGGTTGCAGCA+GGG | + | chr8.2:499114-499133 | MS.gene95070:intron | 45.0% |
| ! | TGAGGACCAGTTAATGGACA+TGG | + | chr8.2:498945-498964 | MS.gene95070:CDS | 45.0% |
| ! | TGGAGAGTTTACTCTAGGAG+GGG | + | chr8.2:501234-501253 | MS.gene95070:intron | 45.0% |
| ! | TTACTGGATTTGGTTGCAGC+AGG | + | chr8.2:499113-499132 | MS.gene95070:intron | 45.0% |
| !! | CGATTGGCTTCAAAACTCCA+AGG | + | chr8.2:500068-500087 | MS.gene95070:CDS | 45.0% |
| !!! | TATGTTTTGAGAGAGAGGGG+GGG | - | chr8.2:501001-501020 | None:intergenic | 45.0% |
| AACTCTGCTGCTGCAGCATT+AGG | - | chr8.2:499027-499046 | None:intergenic | 50.0% | |
| AAGCCAATCGAGTATGGGTC+TGG | - | chr8.2:500058-500077 | None:intergenic | 50.0% | |
| ACTCAGAGCTTGACGGAACA+AGG | - | chr8.2:500494-500513 | None:intergenic | 50.0% | |
| CAGAGCTACAAAGGTCACTG+TGG | + | chr8.2:501872-501891 | MS.gene95070:CDS | 50.0% | |
| CATCCTCTGCTAGGTGAAGA+AGG | - | chr8.2:501950-501969 | None:intergenic | 50.0% | |
| CCCCTCGGAATTGAGATTGA+AGG | - | chr8.2:498769-498788 | None:intergenic | 50.0% | |
| CGTGGAGAGTTTACTCTAGG+AGG | + | chr8.2:501232-501251 | MS.gene95070:intron | 50.0% | |
| CTCCACGCTATGGGCTTATT+TGG | - | chr8.2:501219-501238 | None:intergenic | 50.0% | |
| CTCGTTACAAGAGGGACTAG+AGG | - | chr8.2:499947-499966 | None:intergenic | 50.0% | |
| CTTCTTCACCTAGCAGAGGA+TGG | + | chr8.2:501948-501967 | MS.gene95070:CDS | 50.0% | |
| CTTGGGCCCTTGGTTCATAT+TGG | + | chr8.2:501191-501210 | MS.gene95070:intron | 50.0% | |
| GATCAATTGCTCAACGGACC+AGG | + | chr8.2:499864-499883 | MS.gene95070:CDS | 50.0% | |
| GCTTCAAAACTCCAAGGAGG+AGG | + | chr8.2:500074-500093 | MS.gene95070:CDS | 50.0% | |
| GGAAGTTATAGGAGGAAGGG+AGG | + | chr8.2:500737-500756 | MS.gene95070:intron | 50.0% | |
| GGTCAACACAATGGCTCTTC+AGG | + | chr8.2:499560-499579 | MS.gene95070:intron | 50.0% | |
| GTCCACAAGTTCTGCCACAA+AGG | + | chr8.2:499449-499468 | MS.gene95070:CDS | 50.0% | |
| TCAATCTCAATTCCGAGGGG+TGG | + | chr8.2:498769-498788 | MS.gene95070:CDS | 50.0% | |
| TCCTATAGGAGCTACGCTCT+GGG | + | chr8.2:501412-501431 | MS.gene95070:intron | 50.0% | |
| TCTGACGACCAGTTTCTTGC+AGG | + | chr8.2:499987-500006 | MS.gene95070:intron | 50.0% | |
| TGACCAGACCCATACTCGAT+TGG | + | chr8.2:500052-500071 | MS.gene95070:CDS | 50.0% | |
| TTCCCTTCTTCACCTAGCAG+AGG | + | chr8.2:501944-501963 | MS.gene95070:CDS | 50.0% | |
| TTCCTATAGGAGCTACGCTC+TGG | + | chr8.2:501411-501430 | MS.gene95070:intron | 50.0% | |
| TTTCTTCTGTGCCTCCTCCT+TGG | - | chr8.2:500088-500107 | None:intergenic | 50.0% | |
| ! | ACTGGATTTGGTTGCAGCAG+GGG | + | chr8.2:499115-499134 | MS.gene95070:intron | 50.0% |
| ! | AGGAGGAGGCACAGAAGAAA+TGG | + | chr8.2:500088-500107 | MS.gene95070:CDS | 50.0% |
| ! | GGAGGAGGCACAGAAGAAAT+GGG | + | chr8.2:500089-500108 | MS.gene95070:CDS | 50.0% |
| ! | GGCCAGCTTTTTGCATAACC+TGG | - | chr8.2:499885-499904 | None:intergenic | 50.0% |
| !!! | ATGTTTTGAGAGAGAGGGGG+GGG | - | chr8.2:501000-501019 | None:intergenic | 50.0% |
| !!! | TTAGGTTTTCGGCTTGGTGC+TGG | + | chr8.2:500228-500247 | MS.gene95070:CDS | 50.0% |
| ACGTAAATGGGTCCACCCCT+CGG | - | chr8.2:498784-498803 | None:intergenic | 55.0% | |
| AGGAAGGGAGGGGAAAGGAA+AGG | + | chr8.2:500749-500768 | MS.gene95070:intron | 55.0% | |
| AGGGGAAAGGAAAGGAGAGG+AGG | + | chr8.2:500757-500776 | MS.gene95070:intron | 55.0% | |
| ATAGGAGGAAGGGAGGGGAA+AGG | + | chr8.2:500744-500763 | MS.gene95070:intron | 55.0% | |
| ATGGAGAGCCATCCTCTGCT+AGG | - | chr8.2:501959-501978 | None:intergenic | 55.0% | |
| GGGAAAGGAAAGGAGAGGAG+GGG | + | chr8.2:500759-500778 | MS.gene95070:intron | 55.0% | |
| GGGGAAAGGAAAGGAGAGGA+GGG | + | chr8.2:500758-500777 | MS.gene95070:intron | 55.0% | |
| TCTGCTGCTGCAGCATTAGG+AGG | - | chr8.2:499024-499043 | None:intergenic | 55.0% | |
| ! | AGCTACGCTCTGGGCAGTTT+AGG | + | chr8.2:501421-501440 | MS.gene95070:intron | 55.0% |
| ! | TCAGGAGCACATACCTGTGC+AGG | + | chr8.2:499578-499597 | MS.gene95070:CDS | 55.0% |
| !!! | TGTTTTGAGAGAGAGGGGGG+GGG | - | chr8.2:500999-501018 | None:intergenic | 55.0% |
| AGCTGATCAGCTTGGGCCCT+TGG | + | chr8.2:501181-501200 | MS.gene95070:intron | 60.0% | |
| GCCCAGAGCGTAGCTCCTAT+AGG | - | chr8.2:501416-501435 | None:intergenic | 60.0% | |
| GCTGGCCAACATGACCCTTC+TGG | + | chr8.2:499898-499917 | MS.gene95070:CDS | 60.0% | |
| GGGAGGGGAAAGGAAAGGAG+AGG | + | chr8.2:500754-500773 | MS.gene95070:intron | 60.0% | |
| !! | TTTTGAGAGAGAGGGGGGGG+GGG | - | chr8.2:500997-501016 | None:intergenic | 60.0% |
| !!! | GTTTTGAGAGAGAGGGGGGG+GGG | - | chr8.2:500998-501017 | None:intergenic | 60.0% |
| GGGGGGGACCCAACAAGGTT+TGG | - | chr8.2:500962-500981 | None:intergenic | 65.0% | |
| TTTGAGAGAGAGGGGGGGGG+GGG | - | chr8.2:500996-501015 | None:intergenic | 65.0% | |
| TTGAGAGAGAGGGGGGGGGG+GGG | - | chr8.2:500995-501014 | None:intergenic | 70.0% | |
| TGAGAGAGAGGGGGGGGGGG+GGG | - | chr8.2:500994-501013 | None:intergenic | 75.0% | |
| ! | AGAGAGAGGGGGGGGGGGGG+GGG | - | chr8.2:500992-501011 | None:intergenic | 80.0% |
| ! | GAGAGAGAGGGGGGGGGGGG+GGG | - | chr8.2:500993-501012 | None:intergenic | 80.0% |
| ! | GGGGGGGGGGGGACCCAACA+AGG | - | chr8.2:500967-500986 | None:intergenic | 80.0% |
| ! | AGAGAGGGGGGGGGGGGGGG+GGG | - | chr8.2:500990-501009 | None:intergenic | 85.0% |
| ! | GAGAGAGGGGGGGGGGGGGG+GGG | - | chr8.2:500991-501010 | None:intergenic | 85.0% |
| ! | AGAGGGGGGGGGGGGGGGGG+GGG | - | chr8.2:500988-501007 | None:intergenic | 90.0% |
| ! | GAGAGGGGGGGGGGGGGGGG+GGG | - | chr8.2:500989-501008 | None:intergenic | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | - | chr8.2:500986-501005 | None:intergenic | 95.0% |
| ! | GAGGGGGGGGGGGGGGGGGG+GGG | - | chr8.2:500987-501006 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 498712 | 502019 | 498712 | ID=MS.gene95070 |
| chr8.2 | mRNA | 498712 | 502019 | 498712 | ID=MS.gene95070.t1;Parent=MS.gene95070 |
| chr8.2 | exon | 498712 | 499043 | 498712 | ID=MS.gene95070.t1.exon1;Parent=MS.gene95070.t1 |
| chr8.2 | CDS | 498712 | 499043 | 498712 | ID=cds.MS.gene95070.t1;Parent=MS.gene95070.t1 |
| chr8.2 | exon | 499135 | 499284 | 499135 | ID=MS.gene95070.t1.exon2;Parent=MS.gene95070.t1 |
| chr8.2 | CDS | 499135 | 499284 | 499135 | ID=cds.MS.gene95070.t1;Parent=MS.gene95070.t1 |
| chr8.2 | exon | 499377 | 499470 | 499377 | ID=MS.gene95070.t1.exon3;Parent=MS.gene95070.t1 |
| chr8.2 | CDS | 499377 | 499470 | 499377 | ID=cds.MS.gene95070.t1;Parent=MS.gene95070.t1 |
| chr8.2 | exon | 499561 | 499677 | 499561 | ID=MS.gene95070.t1.exon4;Parent=MS.gene95070.t1 |
| chr8.2 | CDS | 499561 | 499677 | 499561 | ID=cds.MS.gene95070.t1;Parent=MS.gene95070.t1 |
| chr8.2 | exon | 499811 | 499936 | 499811 | ID=MS.gene95070.t1.exon5;Parent=MS.gene95070.t1 |
| chr8.2 | CDS | 499811 | 499936 | 499811 | ID=cds.MS.gene95070.t1;Parent=MS.gene95070.t1 |
| chr8.2 | exon | 500009 | 500269 | 500009 | ID=MS.gene95070.t1.exon6;Parent=MS.gene95070.t1 |
| chr8.2 | CDS | 500009 | 500269 | 500009 | ID=cds.MS.gene95070.t1;Parent=MS.gene95070.t1 |
| chr8.2 | exon | 501735 | 502019 | 501735 | ID=MS.gene95070.t1.exon7;Parent=MS.gene95070.t1 |
| chr8.2 | CDS | 501735 | 502019 | 501735 | ID=cds.MS.gene95070.t1;Parent=MS.gene95070.t1 |
| Gene Sequence |
| Protein sequence |
