Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96337.t1 | AES92271.1 | 96.1 | 461 | 14 | 1 | 1 | 461 | 1 | 457 | 2.50E-252 | 880.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96337.t1 | O64470 | 54.4 | 454 | 198 | 6 | 10 | 460 | 4 | 451 | 2.3e-145 | 516.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96337.t1 | G7JUC6 | 96.1 | 461 | 14 | 1 | 1 | 461 | 1 | 457 | 1.8e-252 | 880.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96337.t1 | MTR_4g127650 | 96.312 | 461 | 13 | 1 | 1 | 461 | 1 | 457 | 0.0 | 917 |
MS.gene96337.t1 | MTR_4g097090 | 77.223 | 461 | 96 | 5 | 4 | 461 | 3 | 457 | 0.0 | 724 |
MS.gene96337.t1 | MTR_3g049150 | 39.294 | 453 | 266 | 6 | 10 | 460 | 2 | 447 | 1.51e-107 | 327 |
MS.gene96337.t1 | MTR_3g026950 | 39.301 | 458 | 263 | 7 | 10 | 460 | 2 | 451 | 2.91e-106 | 323 |
MS.gene96337.t1 | MTR_4g007540 | 38.085 | 449 | 257 | 6 | 10 | 457 | 3 | 431 | 1.41e-102 | 313 |
MS.gene96337.t1 | MTR_4g013050 | 37.856 | 457 | 232 | 9 | 8 | 460 | 2 | 410 | 2.00e-98 | 301 |
MS.gene96337.t1 | MTR_2g064495 | 36.748 | 449 | 262 | 6 | 10 | 457 | 3 | 430 | 1.10e-96 | 298 |
MS.gene96337.t1 | MTR_2g105330 | 36.526 | 449 | 263 | 6 | 10 | 457 | 3 | 430 | 3.80e-95 | 294 |
MS.gene96337.t1 | MTR_8g075610 | 38.425 | 419 | 229 | 8 | 42 | 457 | 26 | 418 | 2.60e-94 | 291 |
MS.gene96337.t1 | MTR_7g085930 | 36.461 | 469 | 267 | 14 | 10 | 460 | 6 | 461 | 3.65e-88 | 277 |
MS.gene96337.t1 | MTR_7g085990 | 35.699 | 465 | 276 | 13 | 10 | 460 | 2 | 457 | 1.09e-86 | 273 |
MS.gene96337.t1 | MTR_7g086000 | 38.242 | 455 | 264 | 11 | 16 | 460 | 10 | 457 | 3.94e-86 | 271 |
MS.gene96337.t1 | MTR_3g049140 | 40.650 | 246 | 143 | 2 | 215 | 460 | 2 | 244 | 4.13e-59 | 194 |
MS.gene96337.t1 | MTR_8g096530 | 30.839 | 441 | 272 | 9 | 18 | 455 | 15 | 425 | 1.38e-54 | 189 |
MS.gene96337.t1 | MTR_7g027175 | 31.236 | 445 | 261 | 10 | 18 | 453 | 24 | 432 | 1.05e-52 | 183 |
MS.gene96337.t1 | MTR_3g098980 | 31.220 | 410 | 238 | 11 | 18 | 419 | 22 | 395 | 8.67e-50 | 176 |
MS.gene96337.t1 | MTR_1g053315 | 30.149 | 471 | 284 | 16 | 10 | 461 | 18 | 462 | 4.10e-47 | 169 |
MS.gene96337.t1 | MTR_7g084940 | 25.918 | 463 | 301 | 12 | 9 | 461 | 15 | 445 | 9.83e-41 | 151 |
MS.gene96337.t1 | MTR_3g071320 | 29.741 | 464 | 281 | 15 | 8 | 458 | 3 | 434 | 1.48e-39 | 148 |
MS.gene96337.t1 | MTR_7g056087 | 23.747 | 459 | 309 | 10 | 9 | 454 | 3 | 433 | 3.60e-37 | 141 |
MS.gene96337.t1 | MTR_7g084910 | 27.130 | 446 | 267 | 13 | 9 | 442 | 16 | 415 | 8.30e-37 | 140 |
MS.gene96337.t1 | MTR_7g085960 | 34.821 | 224 | 109 | 6 | 240 | 460 | 1 | 190 | 7.14e-36 | 132 |
MS.gene96337.t1 | MTR_7g114520 | 28.602 | 465 | 287 | 15 | 3 | 452 | 2 | 436 | 1.26e-34 | 135 |
MS.gene96337.t1 | MTR_5g076700 | 26.180 | 466 | 302 | 12 | 4 | 456 | 2 | 438 | 4.85e-34 | 133 |
MS.gene96337.t1 | MTR_7g114470 | 26.652 | 454 | 286 | 13 | 18 | 456 | 19 | 440 | 8.83e-34 | 132 |
MS.gene96337.t1 | MTR_1g081660 | 26.269 | 453 | 260 | 16 | 31 | 456 | 39 | 444 | 5.77e-32 | 127 |
MS.gene96337.t1 | MTR_1g040215 | 27.356 | 435 | 264 | 16 | 12 | 432 | 9 | 405 | 9.84e-32 | 127 |
MS.gene96337.t1 | MTR_1g040195 | 26.444 | 450 | 265 | 14 | 18 | 456 | 17 | 411 | 2.03e-31 | 125 |
MS.gene96337.t1 | MTR_1g040175 | 27.160 | 405 | 258 | 12 | 18 | 416 | 17 | 390 | 2.18e-31 | 125 |
MS.gene96337.t1 | MTR_7g114550 | 25.696 | 467 | 302 | 14 | 4 | 456 | 2 | 437 | 2.93e-31 | 125 |
MS.gene96337.t1 | MTR_7g114490 | 25.694 | 432 | 275 | 12 | 35 | 453 | 36 | 434 | 4.56e-31 | 125 |
MS.gene96337.t1 | MTR_3g112180 | 29.803 | 406 | 230 | 15 | 66 | 453 | 61 | 429 | 6.27e-31 | 124 |
MS.gene96337.t1 | MTR_4g055170 | 27.119 | 472 | 298 | 15 | 5 | 456 | 7 | 452 | 1.03e-29 | 121 |
MS.gene96337.t1 | MTR_7g114560 | 24.573 | 468 | 306 | 15 | 4 | 456 | 2 | 437 | 1.07e-28 | 118 |
MS.gene96337.t1 | MTR_3g101960 | 26.856 | 458 | 265 | 18 | 30 | 453 | 19 | 440 | 1.92e-28 | 117 |
MS.gene96337.t1 | MTR_2g015430 | 27.335 | 439 | 273 | 14 | 29 | 452 | 23 | 430 | 2.74e-28 | 117 |
MS.gene96337.t1 | MTR_5g090830 | 25.210 | 476 | 310 | 14 | 9 | 460 | 11 | 464 | 3.55e-28 | 117 |
MS.gene96337.t1 | MTR_5g090810 | 24.324 | 481 | 308 | 15 | 9 | 460 | 11 | 464 | 7.70e-28 | 115 |
MS.gene96337.t1 | MTR_2g045550 | 40.385 | 156 | 82 | 2 | 8 | 163 | 2 | 146 | 7.73e-28 | 108 |
MS.gene96337.t1 | MTR_3g101930 | 26.087 | 483 | 289 | 22 | 1 | 453 | 1 | 445 | 1.35e-27 | 115 |
MS.gene96337.t1 | MTR_3g101970 | 26.457 | 446 | 250 | 17 | 31 | 449 | 29 | 423 | 5.82e-27 | 112 |
MS.gene96337.t1 | MTR_1g040320 | 25.301 | 415 | 239 | 11 | 9 | 418 | 8 | 356 | 8.80e-26 | 109 |
MS.gene96337.t1 | MTR_5g084850 | 23.758 | 463 | 291 | 12 | 9 | 456 | 2 | 417 | 1.64e-25 | 108 |
MS.gene96337.t1 | MTR_3g102020 | 26.526 | 426 | 222 | 16 | 62 | 449 | 65 | 437 | 3.59e-25 | 107 |
MS.gene96337.t1 | MTR_1g094790 | 26.107 | 429 | 258 | 16 | 10 | 416 | 3 | 394 | 4.35e-25 | 107 |
MS.gene96337.t1 | MTR_7g114960 | 27.224 | 371 | 244 | 10 | 4 | 367 | 2 | 353 | 4.75e-25 | 107 |
MS.gene96337.t1 | MTR_3g101900 | 24.449 | 454 | 267 | 16 | 31 | 453 | 30 | 438 | 4.97e-25 | 107 |
MS.gene96337.t1 | MTR_3g102010 | 26.517 | 445 | 254 | 18 | 31 | 444 | 30 | 432 | 8.16e-25 | 107 |
MS.gene96337.t1 | MTR_8g079970 | 24.242 | 462 | 295 | 16 | 9 | 455 | 2 | 423 | 9.68e-25 | 106 |
MS.gene96337.t1 | MTR_8g079980 | 24.107 | 448 | 294 | 14 | 18 | 455 | 11 | 422 | 1.22e-24 | 106 |
MS.gene96337.t1 | MTR_8g041770 | 23.282 | 451 | 291 | 15 | 19 | 452 | 18 | 430 | 1.30e-24 | 106 |
MS.gene96337.t1 | MTR_6g045553 | 25.576 | 434 | 245 | 13 | 66 | 454 | 66 | 466 | 1.77e-24 | 106 |
MS.gene96337.t1 | MTR_3g465930 | 29.412 | 357 | 213 | 15 | 9 | 345 | 9 | 346 | 3.49e-24 | 105 |
MS.gene96337.t1 | MTR_5g081960 | 25.000 | 432 | 264 | 15 | 66 | 453 | 61 | 476 | 1.09e-23 | 103 |
MS.gene96337.t1 | MTR_8g079950 | 25.000 | 464 | 289 | 19 | 9 | 455 | 2 | 423 | 2.51e-23 | 102 |
MS.gene96337.t1 | MTR_3g465910 | 29.891 | 368 | 222 | 17 | 18 | 367 | 18 | 367 | 4.18e-23 | 102 |
MS.gene96337.t1 | MTR_4g015180 | 23.374 | 492 | 307 | 14 | 7 | 449 | 3 | 473 | 5.44e-23 | 101 |
MS.gene96337.t1 | MTR_5g084870 | 22.907 | 454 | 307 | 14 | 9 | 456 | 2 | 418 | 6.65e-23 | 101 |
MS.gene96337.t1 | MTR_4g094838 | 23.129 | 441 | 267 | 14 | 26 | 444 | 23 | 413 | 2.01e-22 | 99.8 |
MS.gene96337.t1 | MTR_6g053810 | 27.778 | 360 | 232 | 11 | 2 | 346 | 3 | 349 | 2.82e-22 | 99.4 |
MS.gene96337.t1 | MTR_4g094835 | 23.618 | 398 | 251 | 11 | 66 | 444 | 64 | 427 | 6.30e-22 | 98.2 |
MS.gene96337.t1 | MTR_3g465990 | 28.022 | 364 | 222 | 16 | 1 | 345 | 1 | 343 | 1.24e-21 | 97.4 |
MS.gene96337.t1 | MTR_7g110610 | 24.208 | 442 | 248 | 14 | 18 | 452 | 13 | 374 | 1.48e-21 | 96.7 |
MS.gene96337.t1 | MTR_3g070170 | 24.380 | 484 | 285 | 17 | 4 | 444 | 6 | 451 | 2.62e-21 | 96.7 |
MS.gene96337.t1 | MTR_5g026320 | 24.627 | 402 | 252 | 12 | 23 | 410 | 33 | 397 | 2.96e-21 | 96.3 |
MS.gene96337.t1 | MTR_0190s0020 | 24.250 | 400 | 243 | 14 | 66 | 444 | 63 | 423 | 1.33e-20 | 94.4 |
MS.gene96337.t1 | MTR_3g086020 | 26.526 | 426 | 235 | 19 | 9 | 416 | 4 | 369 | 1.60e-20 | 94.0 |
MS.gene96337.t1 | MTR_4g094832 | 22.969 | 357 | 241 | 9 | 94 | 444 | 83 | 411 | 2.23e-20 | 93.6 |
MS.gene96337.t1 | MTR_4g094842 | 26.098 | 410 | 230 | 19 | 66 | 444 | 62 | 429 | 2.70e-20 | 93.6 |
MS.gene96337.t1 | MTR_5g090880 | 23.371 | 445 | 293 | 14 | 43 | 460 | 43 | 466 | 2.71e-20 | 93.6 |
MS.gene96337.t1 | MTR_1g011660 | 25.325 | 462 | 288 | 16 | 4 | 446 | 2 | 425 | 3.82e-20 | 92.8 |
MS.gene96337.t1 | MTR_3g450710 | 22.762 | 391 | 261 | 11 | 43 | 414 | 44 | 412 | 1.15e-19 | 91.7 |
MS.gene96337.t1 | MTR_3g088420 | 24.821 | 419 | 264 | 17 | 59 | 461 | 49 | 432 | 1.51e-19 | 90.9 |
MS.gene96337.t1 | MTR_8g467580 | 25.968 | 439 | 271 | 18 | 9 | 429 | 2 | 404 | 3.59e-19 | 90.1 |
MS.gene96337.t1 | MTR_3g465980 | 27.900 | 319 | 191 | 13 | 45 | 345 | 46 | 343 | 4.37e-19 | 89.7 |
MS.gene96337.t1 | MTR_8g467590 | 25.829 | 422 | 259 | 19 | 12 | 416 | 5 | 389 | 1.16e-18 | 88.6 |
MS.gene96337.t1 | MTR_1g040315 | 22.523 | 444 | 271 | 13 | 18 | 456 | 17 | 392 | 1.41e-18 | 87.8 |
MS.gene96337.t1 | MTR_3g450690 | 22.955 | 379 | 240 | 12 | 60 | 414 | 66 | 416 | 5.07e-18 | 86.7 |
MS.gene96337.t1 | MTR_4g007460 | 32.624 | 141 | 85 | 3 | 80 | 220 | 1 | 131 | 7.14e-18 | 80.9 |
MS.gene96337.t1 | MTR_3g028210 | 23.341 | 437 | 286 | 14 | 46 | 456 | 47 | 460 | 8.21e-18 | 85.9 |
MS.gene96337.t1 | MTR_7g014160 | 24.242 | 495 | 315 | 18 | 3 | 460 | 2 | 473 | 1.17e-17 | 85.5 |
MS.gene96337.t1 | MTR_3g465950 | 29.097 | 299 | 175 | 10 | 65 | 345 | 67 | 346 | 1.92e-17 | 84.7 |
MS.gene96337.t1 | MTR_6g015320 | 22.526 | 475 | 326 | 13 | 5 | 460 | 3 | 454 | 5.19e-17 | 83.6 |
MS.gene96337.t1 | MTR_4g094828 | 24.000 | 400 | 256 | 15 | 66 | 444 | 59 | 431 | 7.87e-17 | 82.8 |
MS.gene96337.t1 | MTR_4g022290 | 24.533 | 375 | 228 | 15 | 66 | 419 | 60 | 400 | 2.48e-16 | 81.3 |
MS.gene96337.t1 | MTR_3g465880 | 26.596 | 376 | 248 | 14 | 12 | 371 | 12 | 375 | 2.85e-16 | 81.3 |
MS.gene96337.t1 | MTR_0502s0010 | 27.572 | 243 | 156 | 6 | 103 | 339 | 2 | 230 | 4.77e-16 | 77.8 |
MS.gene96337.t1 | MTR_6g015815 | 23.695 | 498 | 304 | 21 | 1 | 460 | 1 | 460 | 6.12e-16 | 80.1 |
MS.gene96337.t1 | MTR_6g015315 | 23.362 | 458 | 294 | 15 | 24 | 460 | 31 | 452 | 7.77e-16 | 79.7 |
MS.gene96337.t1 | MTR_7g014620 | 24.176 | 455 | 287 | 15 | 29 | 460 | 13 | 432 | 9.02e-16 | 79.7 |
MS.gene96337.t1 | MTR_7g085970 | 42.683 | 82 | 46 | 1 | 103 | 184 | 34 | 114 | 1.11e-15 | 73.9 |
MS.gene96337.t1 | MTR_7g014610 | 23.061 | 490 | 316 | 17 | 10 | 460 | 8 | 475 | 4.04e-15 | 77.8 |
MS.gene96337.t1 | MTR_2g045540 | 37.607 | 117 | 61 | 2 | 215 | 331 | 2 | 106 | 5.04e-15 | 71.6 |
MS.gene96337.t1 | MTR_3g100150 | 25.081 | 307 | 196 | 12 | 31 | 328 | 34 | 315 | 9.86e-15 | 76.6 |
MS.gene96337.t1 | MTR_2g089735 | 24.627 | 402 | 252 | 15 | 41 | 413 | 37 | 416 | 1.04e-14 | 76.6 |
MS.gene96337.t1 | MTR_7g014630 | 25.341 | 367 | 217 | 13 | 4 | 321 | 3 | 361 | 3.21e-14 | 74.3 |
MS.gene96337.t1 | MTR_4g007470 | 50.000 | 60 | 30 | 0 | 398 | 457 | 17 | 76 | 5.82e-13 | 64.7 |
MS.gene96337.t1 | MTR_7g114500 | 33.766 | 154 | 94 | 5 | 4 | 152 | 2 | 152 | 7.85e-13 | 66.6 |
MS.gene96337.t1 | MTR_2g089755 | 25.182 | 413 | 235 | 19 | 41 | 411 | 48 | 428 | 8.38e-13 | 70.5 |
MS.gene96337.t1 | MTR_1g035890 | 24.179 | 335 | 189 | 16 | 1 | 311 | 7 | 300 | 1.37e-12 | 69.7 |
MS.gene96337.t1 | MTR_7g114510 | 24.265 | 272 | 177 | 6 | 148 | 416 | 8 | 253 | 1.67e-12 | 68.6 |
MS.gene96337.t1 | MTR_2g036780 | 24.759 | 311 | 190 | 11 | 6 | 304 | 13 | 291 | 2.48e-12 | 68.9 |
MS.gene96337.t1 | MTR_3g049080 | 44.048 | 84 | 43 | 2 | 10 | 92 | 2 | 82 | 6.10e-12 | 61.6 |
MS.gene96337.t1 | MTR_6g015830 | 21.212 | 462 | 301 | 16 | 29 | 460 | 32 | 460 | 1.11e-11 | 67.0 |
MS.gene96337.t1 | MTR_3g087640 | 24.242 | 462 | 286 | 20 | 29 | 452 | 29 | 464 | 1.15e-11 | 67.0 |
MS.gene96337.t1 | MTR_7g014330 | 21.944 | 360 | 226 | 11 | 29 | 352 | 24 | 364 | 2.33e-11 | 65.9 |
MS.gene96337.t1 | MTR_6g015850 | 21.616 | 458 | 301 | 14 | 29 | 460 | 32 | 457 | 6.77e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96337.t1 | AT2G19070 | 56.360 | 456 | 190 | 6 | 8 | 460 | 2 | 451 | 0.0 | 541 |
MS.gene96337.t1 | AT5G48930 | 37.029 | 451 | 263 | 6 | 9 | 458 | 2 | 432 | 2.35e-101 | 310 |
MS.gene96337.t1 | AT5G57840 | 31.209 | 455 | 288 | 8 | 9 | 458 | 2 | 436 | 1.94e-69 | 228 |
MS.gene96337.t1 | AT5G41040 | 32.135 | 445 | 269 | 10 | 18 | 458 | 25 | 440 | 9.06e-63 | 210 |
MS.gene96337.t1 | AT5G41040 | 32.135 | 445 | 269 | 10 | 18 | 458 | 41 | 456 | 1.42e-62 | 210 |
MS.gene96337.t1 | AT3G48720 | 29.581 | 453 | 288 | 7 | 4 | 454 | 3 | 426 | 1.09e-54 | 188 |
MS.gene96337.t1 | AT5G63560 | 30.464 | 453 | 266 | 9 | 10 | 453 | 9 | 421 | 2.12e-51 | 179 |
MS.gene96337.t1 | AT1G65450 | 28.879 | 464 | 288 | 13 | 9 | 461 | 17 | 449 | 1.86e-44 | 162 |
MS.gene96337.t1 | AT1G27620 | 28.802 | 434 | 269 | 11 | 18 | 446 | 17 | 415 | 1.97e-38 | 145 |
MS.gene96337.t1 | AT5G17540 | 27.922 | 462 | 290 | 14 | 3 | 452 | 2 | 432 | 3.63e-37 | 142 |
MS.gene96337.t1 | AT2G40230 | 27.212 | 452 | 274 | 12 | 8 | 442 | 3 | 416 | 8.99e-35 | 135 |
MS.gene96337.t1 | AT1G03390 | 27.907 | 473 | 277 | 21 | 10 | 454 | 17 | 453 | 1.82e-34 | 134 |
MS.gene96337.t1 | AT3G26040 | 27.354 | 446 | 279 | 16 | 18 | 454 | 11 | 420 | 6.04e-30 | 121 |
MS.gene96337.t1 | AT3G03480 | 25.581 | 473 | 288 | 11 | 2 | 452 | 11 | 441 | 6.23e-29 | 119 |
MS.gene96337.t1 | AT4G31910 | 25.799 | 438 | 272 | 13 | 45 | 456 | 45 | 455 | 2.44e-28 | 117 |
MS.gene96337.t1 | AT5G07080 | 28.964 | 473 | 282 | 19 | 4 | 456 | 7 | 445 | 2.93e-28 | 117 |
MS.gene96337.t1 | AT5G07860 | 26.625 | 477 | 288 | 16 | 1 | 453 | 1 | 439 | 1.33e-27 | 115 |
MS.gene96337.t1 | AT1G32910 | 24.697 | 413 | 264 | 16 | 41 | 437 | 44 | 425 | 1.67e-27 | 114 |
MS.gene96337.t1 | AT3G50270 | 27.051 | 451 | 286 | 15 | 10 | 444 | 6 | 429 | 2.25e-27 | 114 |
MS.gene96337.t1 | AT5G42830 | 26.386 | 451 | 263 | 18 | 31 | 453 | 30 | 439 | 1.23e-26 | 112 |
MS.gene96337.t1 | AT1G28680 | 26.889 | 450 | 269 | 17 | 29 | 454 | 25 | 438 | 3.78e-26 | 110 |
MS.gene96337.t1 | AT3G30280 | 26.949 | 449 | 271 | 17 | 23 | 455 | 21 | 428 | 5.53e-26 | 110 |
MS.gene96337.t1 | AT1G78990 | 25.117 | 426 | 259 | 18 | 42 | 446 | 45 | 431 | 1.35e-24 | 106 |
MS.gene96337.t1 | AT5G23940 | 26.178 | 382 | 231 | 12 | 60 | 421 | 59 | 409 | 2.19e-24 | 105 |
MS.gene96337.t1 | AT1G24420 | 27.293 | 447 | 274 | 19 | 18 | 453 | 13 | 419 | 2.82e-24 | 105 |
MS.gene96337.t1 | AT1G24420 | 27.293 | 447 | 274 | 19 | 18 | 453 | 13 | 419 | 2.82e-24 | 105 |
MS.gene96337.t1 | AT2G25150 | 26.522 | 460 | 286 | 19 | 18 | 456 | 21 | 449 | 3.30e-24 | 105 |
MS.gene96337.t1 | AT5G23970 | 26.915 | 457 | 275 | 18 | 9 | 453 | 2 | 411 | 1.00e-23 | 103 |
MS.gene96337.t1 | AT1G24430 | 27.020 | 396 | 234 | 16 | 31 | 416 | 29 | 379 | 2.74e-23 | 102 |
MS.gene96337.t1 | AT3G50300 | 25.234 | 428 | 277 | 14 | 45 | 452 | 33 | 437 | 7.09e-23 | 101 |
MS.gene96337.t1 | AT5G67150 | 26.018 | 442 | 262 | 18 | 28 | 444 | 26 | 427 | 1.15e-22 | 100 |
MS.gene96337.t1 | AT1G28680 | 27.123 | 365 | 221 | 14 | 29 | 379 | 25 | 358 | 5.42e-22 | 97.8 |
MS.gene96337.t1 | AT5G47980 | 27.632 | 456 | 266 | 20 | 18 | 452 | 13 | 425 | 9.30e-22 | 97.8 |
MS.gene96337.t1 | AT3G50280 | 25.635 | 394 | 261 | 11 | 64 | 447 | 57 | 428 | 1.29e-21 | 97.4 |
MS.gene96337.t1 | AT2G23510 | 25.598 | 418 | 257 | 17 | 60 | 456 | 63 | 447 | 1.60e-21 | 97.1 |
MS.gene96337.t1 | AT1G31490 | 24.691 | 405 | 246 | 12 | 22 | 410 | 20 | 381 | 3.28e-21 | 96.3 |
MS.gene96337.t1 | AT5G07870 | 25.050 | 503 | 275 | 17 | 1 | 453 | 1 | 451 | 3.88e-21 | 96.3 |
MS.gene96337.t1 | AT5G38130 | 25.221 | 452 | 290 | 13 | 9 | 444 | 23 | 442 | 4.91e-21 | 95.9 |
MS.gene96337.t1 | AT5G01210 | 24.079 | 407 | 259 | 12 | 77 | 453 | 73 | 459 | 3.41e-20 | 93.2 |
MS.gene96337.t1 | AT4G15390 | 23.542 | 463 | 300 | 13 | 9 | 455 | 7 | 431 | 4.42e-20 | 92.8 |
MS.gene96337.t1 | AT4G15390 | 23.542 | 463 | 300 | 13 | 9 | 455 | 7 | 431 | 4.42e-20 | 92.8 |
MS.gene96337.t1 | AT3G62160 | 22.750 | 400 | 262 | 11 | 63 | 452 | 52 | 414 | 4.62e-20 | 92.4 |
MS.gene96337.t1 | AT3G47170 | 26.353 | 425 | 262 | 17 | 18 | 417 | 20 | 418 | 7.85e-20 | 92.4 |
MS.gene96337.t1 | AT5G47950 | 26.869 | 428 | 244 | 18 | 23 | 436 | 21 | 393 | 8.70e-20 | 91.7 |
MS.gene96337.t1 | AT2G39980 | 24.709 | 429 | 254 | 14 | 66 | 449 | 62 | 466 | 2.46e-19 | 90.9 |
MS.gene96337.t1 | AT5G07850 | 24.113 | 423 | 237 | 15 | 66 | 453 | 70 | 443 | 3.87e-17 | 84.0 |
MS.gene96337.t1 | AT3G29635 | 22.066 | 426 | 255 | 11 | 62 | 452 | 63 | 446 | 4.01e-17 | 84.0 |
MS.gene96337.t1 | AT5G67160 | 23.362 | 458 | 265 | 16 | 10 | 430 | 7 | 415 | 1.50e-16 | 82.0 |
MS.gene96337.t1 | AT1G65450 | 36.170 | 141 | 85 | 4 | 9 | 147 | 17 | 154 | 7.93e-16 | 75.5 |
MS.gene96337.t1 | AT1G65450 | 25.000 | 308 | 194 | 9 | 163 | 461 | 6 | 285 | 2.35e-15 | 76.6 |
MS.gene96337.t1 | AT3G29590 | 25.185 | 405 | 252 | 14 | 74 | 456 | 69 | 444 | 3.80e-15 | 77.8 |
MS.gene96337.t1 | AT3G29680 | 23.128 | 454 | 296 | 14 | 29 | 459 | 23 | 446 | 6.33e-15 | 77.0 |
MS.gene96337.t1 | AT3G50280 | 24.333 | 300 | 204 | 7 | 142 | 440 | 13 | 290 | 3.74e-14 | 73.6 |
MS.gene96337.t1 | AT5G39080 | 23.965 | 459 | 283 | 18 | 29 | 452 | 26 | 453 | 1.97e-13 | 72.4 |
MS.gene96337.t1 | AT3G50290 | 24.818 | 274 | 182 | 8 | 142 | 412 | 19 | 271 | 2.52e-13 | 70.5 |
MS.gene96337.t1 | AT5G39050 | 24.478 | 335 | 208 | 12 | 100 | 411 | 106 | 418 | 1.63e-12 | 69.7 |
MS.gene96337.t1 | AT3G23840 | 26.891 | 238 | 134 | 9 | 65 | 289 | 61 | 271 | 3.61e-12 | 68.6 |
MS.gene96337.t1 | AT5G39090 | 24.029 | 412 | 275 | 12 | 62 | 460 | 61 | 447 | 7.05e-12 | 67.8 |
MS.gene96337.t1 | AT4G15400 | 24.664 | 446 | 284 | 16 | 18 | 452 | 13 | 417 | 5.19e-11 | 65.1 |
Find 101 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAATTTATGGACTTGATTT+TGG | 0.133239 | 8.4:-6829862 | MS.gene96337:CDS |
TGGTTGACATTGCCAATTTA+TGG | 0.133569 | 8.4:-6829874 | MS.gene96337:CDS |
CAACTAACCACTCCTAAATT+TGG | 0.151386 | 8.4:+6829895 | None:intergenic |
TCAAGATCTTCATGCTAAAA+TGG | 0.155448 | 8.4:-6829950 | MS.gene96337:CDS |
AAATTTGGATTCCCATAAAA+TGG | 0.241137 | 8.4:+6829910 | None:intergenic |
GATTTAATGTATAAGCCTTT+AGG | 0.260599 | 8.4:-6830075 | MS.gene96337:CDS |
CACTTGGTGTTTGTGTTGAT+TGG | 0.283752 | 8.4:-6830179 | MS.gene96337:CDS |
ATTTGATCCCATTCGGATAA+TGG | 0.286332 | 8.4:+6830975 | None:intergenic |
AATGAACCTCCGTTATTGTT+AGG | 0.288117 | 8.4:-6830414 | MS.gene96337:CDS |
CCAAAATCAAGTCCATAAAT+TGG | 0.296190 | 8.4:+6829862 | None:intergenic |
TTTACGTCAAGGTCAAATTA+TGG | 0.302737 | 8.4:-6830468 | MS.gene96337:CDS |
CCATCTGAATCATGTGTTCC+TGG | 0.316026 | 8.4:+6829814 | None:intergenic |
ATTTAATGTATAAGCCTTTA+GGG | 0.317031 | 8.4:-6830074 | MS.gene96337:CDS |
AACACGTTTATATCAAAATA+TGG | 0.317424 | 8.4:+6830489 | None:intergenic |
CCATTCCCACAATACCCTTT+TGG | 0.328394 | 8.4:+6830132 | None:intergenic |
AAACTTTAACGGGTCATGTT+TGG | 0.347319 | 8.4:-6830248 | MS.gene96337:CDS |
CAAGATCTTCATGCTAAAAT+GGG | 0.351060 | 8.4:-6829949 | MS.gene96337:CDS |
GTTGTAGCTACTAGTCTTGC+AGG | 0.354557 | 8.4:-6830099 | MS.gene96337:CDS |
ACCAACGGAATGTCTTCAAT+TGG | 0.382219 | 8.4:+6830654 | None:intergenic |
GTATAACCTCGACCATTACT+AGG | 0.391472 | 8.4:+6830279 | None:intergenic |
TTATCCGAATGGGATCAAAT+TGG | 0.399247 | 8.4:-6830972 | MS.gene96337:CDS |
TGTAATCGATGTGCGGGATA+AGG | 0.410262 | 8.4:+6830682 | None:intergenic |
TACGAGGTATGAAACTTTAA+CGG | 0.417974 | 8.4:-6830259 | MS.gene96337:CDS |
TTCGAATTTCCTAACAATAA+CGG | 0.421650 | 8.4:+6830405 | None:intergenic |
TGATGATGATGGATCTTTGT+TGG | 0.422793 | 8.4:-6829767 | MS.gene96337:CDS |
CAAATTTAGGAGTGGTTAGT+TGG | 0.425194 | 8.4:-6829894 | MS.gene96337:CDS |
AGGTGAAAAGTCACCTAGTT+CGG | 0.428468 | 8.4:+6830725 | None:intergenic |
TGATGTCGATTGCAACTCAT+TGG | 0.431953 | 8.4:-6830787 | MS.gene96337:CDS |
CTTCCTAGTTATGATGATGA+TGG | 0.432185 | 8.4:-6829778 | MS.gene96337:CDS |
CCAAAAGGGTATTGTGGGAA+TGG | 0.435439 | 8.4:-6830132 | MS.gene96337:CDS |
GTATTGTGGGAATGGGACTT+TGG | 0.437166 | 8.4:-6830124 | MS.gene96337:CDS |
ACAATGTTAATGTTAATGAA+TGG | 0.437554 | 8.4:-6830443 | MS.gene96337:CDS |
GTTTCCAATTTGATCCCATT+CGG | 0.438936 | 8.4:+6830968 | None:intergenic |
CAATGTTAATGTTAATGAAT+GGG | 0.447830 | 8.4:-6830442 | MS.gene96337:CDS |
GGTATGCTTCAAGTAGGATA+AGG | 0.453543 | 8.4:-6830053 | MS.gene96337:CDS |
ATCTCACACGCGGTTGCTGA+TGG | 0.455708 | 8.4:-6830579 | MS.gene96337:CDS |
CCATACCATGTTGGTTCCAT+TGG | 0.458961 | 8.4:+6831005 | None:intergenic |
ATTTACCAAAAGGGTATTGT+GGG | 0.462953 | 8.4:-6830137 | MS.gene96337:CDS |
GTGGAGCCTAATTTACCAAA+AGG | 0.470014 | 8.4:-6830147 | MS.gene96337:CDS |
ACGAGGTATGAAACTTTAAC+GGG | 0.471332 | 8.4:-6830258 | MS.gene96337:CDS |
GTATGCTTCAAGTAGGATAA+GGG | 0.479099 | 8.4:-6830052 | MS.gene96337:CDS |
TTGGTGTTTGTGTTGATTGG+AGG | 0.483055 | 8.4:-6830176 | MS.gene96337:CDS |
AAAATGGGGAGTGATGATAA+AGG | 0.485105 | 8.4:-6829934 | MS.gene96337:CDS |
CGACCAGCTAGTGGATAAAA+CGG | 0.488051 | 8.4:+6830837 | None:intergenic |
GAATGATGAGTATGTGAGAA+TGG | 0.489545 | 8.4:-6830013 | MS.gene96337:CDS |
GATGTCGATTGCAACTCATT+GGG | 0.490677 | 8.4:-6830786 | MS.gene96337:CDS |
CAAAAGGGTATTGTGGGAAT+GGG | 0.497511 | 8.4:-6830131 | MS.gene96337:CDS |
ATTGCATTTCACTTCTGAGT+GGG | 0.499368 | 8.4:-6830547 | MS.gene96337:CDS |
AATTTACCAAAAGGGTATTG+TGG | 0.506275 | 8.4:-6830138 | MS.gene96337:CDS |
TCGATTACCATTATCCGAAT+GGG | 0.509719 | 8.4:-6830982 | MS.gene96337:CDS |
CCAACGGAATGTCTTCAATT+GGG | 0.512424 | 8.4:+6830655 | None:intergenic |
TCGATGTGCGGGATAAGGTA+AGG | 0.519182 | 8.4:+6830687 | None:intergenic |
GTCGATTACCATTATCCGAA+TGG | 0.520442 | 8.4:-6830983 | MS.gene96337:CDS |
ATTCGAATAATGTTGAAGAA+AGG | 0.528429 | 8.4:-6830389 | MS.gene96337:CDS |
CTACTTGAAGCATACCCTAA+AGG | 0.532100 | 8.4:+6830060 | None:intergenic |
CCCAATTGAAGACATTCCGT+TGG | 0.532776 | 8.4:-6830655 | MS.gene96337:CDS |
AAATGGGGAGTGATGATAAA+GGG | 0.542080 | 8.4:-6829933 | MS.gene96337:CDS |
CGTTTACAATGGAAAGAAAA+CGG | 0.544157 | 8.4:-6830816 | MS.gene96337:CDS |
ACACAAACACCAAGTGAAGT+TGG | 0.547164 | 8.4:+6830186 | None:intergenic |
TGGAGCCTAATTTACCAAAA+GGG | 0.547749 | 8.4:-6830146 | MS.gene96337:CDS |
CCATGGATCACACAATGTCT+TGG | 0.550065 | 8.4:+6829692 | None:intergenic |
CATTGTAAACGACCAGCTAG+TGG | 0.552433 | 8.4:+6830828 | None:intergenic |
AAAGAAGTTTATATGGGGCC+AGG | 0.552584 | 8.4:-6829832 | MS.gene96337:CDS |
CTTTAGGGTATGCTTCAAGT+AGG | 0.553080 | 8.4:-6830059 | MS.gene96337:CDS |
CACTAGCTGGTCGTTTACAA+TGG | 0.558009 | 8.4:-6830827 | MS.gene96337:CDS |
CCAATGGAACCAACATGGTA+TGG | 0.558649 | 8.4:-6831005 | MS.gene96337:CDS |
TAAGGGTAATATTCACAAGA+AGG | 0.560628 | 8.4:+6830705 | None:intergenic |
ATATAAACGTGTTTACGTCA+AGG | 0.565352 | 8.4:-6830479 | MS.gene96337:CDS |
GAGTGGGCACGGCTTGCGCG+TGG | 0.568092 | 8.4:-6830531 | MS.gene96337:CDS |
GATCCATCATCATCATAACT+AGG | 0.569234 | 8.4:+6829775 | None:intergenic |
TAATGAGTCTTTCAAAGTGG+TGG | 0.571832 | 8.4:+6830875 | None:intergenic |
AATGATGAGTATGTGAGAAT+GGG | 0.572328 | 8.4:-6830012 | MS.gene96337:CDS |
CCAGGAACACATGATTCAGA+TGG | 0.573025 | 8.4:-6829814 | MS.gene96337:CDS |
CAGCTCACAAATTTCAAATG+TGG | 0.576010 | 8.4:-6830624 | MS.gene96337:CDS |
GGTTGCTATTTGTTTGCAAG+AGG | 0.583122 | 8.4:-6829746 | MS.gene96337:CDS |
GGCGTGTGTAATCGATGTGC+GGG | 0.587976 | 8.4:+6830676 | None:intergenic |
AATGACCAACCAACTTCACT+TGG | 0.592125 | 8.4:-6830195 | MS.gene96337:CDS |
TTGTAGCTACTAGTCTTGCA+GGG | 0.594230 | 8.4:-6830098 | MS.gene96337:CDS |
CGATGTGCGGGATAAGGTAA+GGG | 0.599896 | 8.4:+6830688 | None:intergenic |
TTCATATGAATGCATTCAAG+AGG | 0.603092 | 8.4:-6829723 | MS.gene96337:CDS |
CTCACAAATTTCAAATGTGG+TGG | 0.605408 | 8.4:-6830621 | MS.gene96337:CDS |
TGGGAATCCAAATTTAGGAG+TGG | 0.605814 | 8.4:-6829902 | MS.gene96337:CDS |
TCGTTAACATTATCCGAACT+AGG | 0.607969 | 8.4:-6830738 | MS.gene96337:CDS |
ATTTCACTTCTGAGTGGGCA+CGG | 0.609975 | 8.4:-6830542 | MS.gene96337:CDS |
TTGTTACTCTGTGAGACCAA+TGG | 0.620374 | 8.4:-6831021 | MS.gene96337:CDS |
CTAGTGGATAAAACGGCACA+AGG | 0.622534 | 8.4:+6830844 | None:intergenic |
AAGATCTTCATGCTAAAATG+GGG | 0.622537 | 8.4:-6829948 | MS.gene96337:CDS |
CATTGCATTTCACTTCTGAG+TGG | 0.627101 | 8.4:-6830548 | MS.gene96337:CDS |
AAACACCAAGTGAAGTTGGT+TGG | 0.627512 | 8.4:+6830190 | None:intergenic |
GCTTAATGAGTCTTTCAAAG+TGG | 0.631806 | 8.4:+6830872 | None:intergenic |
AGAAGTGCAAGTAAAGCTAG+AGG | 0.638172 | 8.4:-6830225 | MS.gene96337:CDS |
TGTTGATTGGAGGAATCGTG+TGG | 0.639859 | 8.4:-6830166 | MS.gene96337:CDS |
GGTAATCGACCATACCATGT+TGG | 0.642402 | 8.4:+6830996 | None:intergenic |
GAAGTGCAAGTAAAGCTAGA+GGG | 0.644794 | 8.4:-6830224 | MS.gene96337:CDS |
GTGAGCTGAACAATAACCAA+CGG | 0.652853 | 8.4:+6830639 | None:intergenic |
GAATTTCCTAACAATAACGG+AGG | 0.656219 | 8.4:+6830408 | None:intergenic |
TGTAGCTACTAGTCTTGCAG+GGG | 0.658310 | 8.4:-6830097 | MS.gene96337:CDS |
GGGCGTGTGTAATCGATGTG+CGG | 0.688495 | 8.4:+6830675 | None:intergenic |
TGAGACCAATGGAACCAACA+TGG | 0.704882 | 8.4:-6831010 | MS.gene96337:CDS |
TAGTTTGTTAATCTCACACG+CGG | 0.722702 | 8.4:-6830589 | MS.gene96337:CDS |
GTAATGGTCGAGGTTATACG+AGG | 0.741407 | 8.4:-6830275 | MS.gene96337:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACACGTTTATATCAAAATA+TGG | + | chr8.4:6830275-6830294 | None:intergenic | 20.0% |
!! | ACAATGTTAATGTTAATGAA+TGG | - | chr8.4:6830318-6830337 | MS.gene96337:CDS | 20.0% |
!! | ATTTAATGTATAAGCCTTTA+GGG | - | chr8.4:6830687-6830706 | MS.gene96337:CDS | 20.0% |
!! | CAATGTTAATGTTAATGAAT+GGG | - | chr8.4:6830319-6830338 | MS.gene96337:CDS | 20.0% |
! | AAAAACAGCAAATGAAAGTT+GGG | - | chr8.4:6830454-6830473 | MS.gene96337:CDS | 25.0% |
! | AAATTTGGATTCCCATAAAA+TGG | + | chr8.4:6830854-6830873 | None:intergenic | 25.0% |
! | ATTCGAATAATGTTGAAGAA+AGG | - | chr8.4:6830372-6830391 | MS.gene96337:CDS | 25.0% |
! | GATTTAATGTATAAGCCTTT+AGG | - | chr8.4:6830686-6830705 | MS.gene96337:CDS | 25.0% |
! | TTCGAATTTCCTAACAATAA+CGG | + | chr8.4:6830359-6830378 | None:intergenic | 25.0% |
!! | TTTTATGGGAATCCAAATTT+AGG | - | chr8.4:6830854-6830873 | MS.gene96337:CDS | 25.0% |
!!! | ACTTTTCAATGTTACTTTTG+AGG | + | chr8.4:6829721-6829740 | None:intergenic | 25.0% |
AAGATCTTCATGCTAAAATG+GGG | - | chr8.4:6830813-6830832 | MS.gene96337:CDS | 30.0% | |
AATGATGAGTATGTGAGAAT+GGG | - | chr8.4:6830749-6830768 | MS.gene96337:CDS | 30.0% | |
ATATAAACGTGTTTACGTCA+AGG | - | chr8.4:6830282-6830301 | MS.gene96337:CDS | 30.0% | |
CAAGATCTTCATGCTAAAAT+GGG | - | chr8.4:6830812-6830831 | MS.gene96337:CDS | 30.0% | |
CCAAAATCAAGTCCATAAAT+TGG | + | chr8.4:6830902-6830921 | None:intergenic | 30.0% | |
CGTTTACAATGGAAAGAAAA+CGG | - | chr8.4:6829945-6829964 | MS.gene96337:CDS | 30.0% | |
GAAAAACAGCAAATGAAAGT+TGG | - | chr8.4:6830453-6830472 | MS.gene96337:CDS | 30.0% | |
TAAGGGTAATATTCACAAGA+AGG | + | chr8.4:6830059-6830078 | None:intergenic | 30.0% | |
TACGAGGTATGAAACTTTAA+CGG | - | chr8.4:6830502-6830521 | MS.gene96337:CDS | 30.0% | |
TCAAGATCTTCATGCTAAAA+TGG | - | chr8.4:6830811-6830830 | MS.gene96337:CDS | 30.0% | |
TTCATATGAATGCATTCAAG+AGG | - | chr8.4:6831038-6831057 | MS.gene96337:CDS | 30.0% | |
TTTACGTCAAGGTCAAATTA+TGG | - | chr8.4:6830293-6830312 | MS.gene96337:CDS | 30.0% | |
! | AAATATGGCATTGTTTTCAC+AGG | + | chr8.4:6830260-6830279 | None:intergenic | 30.0% |
! | CAATACCCTTTTGGTAAATT+AGG | + | chr8.4:6830623-6830642 | None:intergenic | 30.0% |
! | CCAATTTATGGACTTGATTT+TGG | - | chr8.4:6830899-6830918 | MS.gene96337:CDS | 30.0% |
! | TTATGGACTTGATTTTGGAT+GGG | - | chr8.4:6830904-6830923 | MS.gene96337:CDS | 30.0% |
! | TTTATGGACTTGATTTTGGA+TGG | - | chr8.4:6830903-6830922 | MS.gene96337:CDS | 30.0% |
!! | AATTTACCAAAAGGGTATTG+TGG | - | chr8.4:6830623-6830642 | MS.gene96337:CDS | 30.0% |
!! | ATGATAAAGGGCCATTTTAT+GGG | - | chr8.4:6830840-6830859 | MS.gene96337:CDS | 30.0% |
!! | ATTTACCAAAAGGGTATTGT+GGG | - | chr8.4:6830624-6830643 | MS.gene96337:CDS | 30.0% |
!!! | TTTCAATGTTACTTTTGAGG+AGG | + | chr8.4:6829718-6829737 | None:intergenic | 30.0% |
AAAATGGGGAGTGATGATAA+AGG | - | chr8.4:6830827-6830846 | MS.gene96337:CDS | 35.0% | |
AAATGGGGAGTGATGATAAA+GGG | - | chr8.4:6830828-6830847 | MS.gene96337:CDS | 35.0% | |
AATGAACCTCCGTTATTGTT+AGG | - | chr8.4:6830347-6830366 | MS.gene96337:CDS | 35.0% | |
ACGAGGTATGAAACTTTAAC+GGG | - | chr8.4:6830503-6830522 | MS.gene96337:CDS | 35.0% | |
AGTTGGGAAAAACCTAGTAA+TGG | - | chr8.4:6830470-6830489 | MS.gene96337:CDS | 35.0% | |
ATGGGGGAAAGAAGTTTATA+TGG | - | chr8.4:6830922-6830941 | MS.gene96337:CDS | 35.0% | |
ATTGCATTTCACTTCTGAGT+GGG | - | chr8.4:6830214-6830233 | MS.gene96337:CDS | 35.0% | |
ATTTGATCCCATTCGGATAA+TGG | + | chr8.4:6829789-6829808 | None:intergenic | 35.0% | |
CAAATTTAGGAGTGGTTAGT+TGG | - | chr8.4:6830867-6830886 | MS.gene96337:CDS | 35.0% | |
CAACTAACCACTCCTAAATT+TGG | + | chr8.4:6830869-6830888 | None:intergenic | 35.0% | |
CAGCTCACAAATTTCAAATG+TGG | - | chr8.4:6830137-6830156 | MS.gene96337:CDS | 35.0% | |
CTCACAAATTTCAAATGTGG+TGG | - | chr8.4:6830140-6830159 | MS.gene96337:CDS | 35.0% | |
GAATGATGAGTATGTGAGAA+TGG | - | chr8.4:6830748-6830767 | MS.gene96337:CDS | 35.0% | |
GAATTTCCTAACAATAACGG+AGG | + | chr8.4:6830356-6830375 | None:intergenic | 35.0% | |
GATCCATCATCATCATAACT+AGG | + | chr8.4:6830989-6831008 | None:intergenic | 35.0% | |
GCTTAATGAGTCTTTCAAAG+TGG | + | chr8.4:6829892-6829911 | None:intergenic | 35.0% | |
GTATGCTTCAAGTAGGATAA+GGG | - | chr8.4:6830709-6830728 | MS.gene96337:CDS | 35.0% | |
GTTTCCAATTTGATCCCATT+CGG | + | chr8.4:6829796-6829815 | None:intergenic | 35.0% | |
TAATGAGTCTTTCAAAGTGG+TGG | + | chr8.4:6829889-6829908 | None:intergenic | 35.0% | |
TCGATTACCATTATCCGAAT+GGG | - | chr8.4:6829779-6829798 | MS.gene96337:CDS | 35.0% | |
TCGTTAACATTATCCGAACT+AGG | - | chr8.4:6830023-6830042 | MS.gene96337:CDS | 35.0% | |
TGGAGCCTAATTTACCAAAA+GGG | - | chr8.4:6830615-6830634 | MS.gene96337:CDS | 35.0% | |
TGGGGGAAAGAAGTTTATAT+GGG | - | chr8.4:6830923-6830942 | MS.gene96337:CDS | 35.0% | |
TGGTTGACATTGCCAATTTA+TGG | - | chr8.4:6830887-6830906 | MS.gene96337:CDS | 35.0% | |
TTATCCGAATGGGATCAAAT+TGG | - | chr8.4:6829789-6829808 | MS.gene96337:CDS | 35.0% | |
! | AAACTTTAACGGGTCATGTT+TGG | - | chr8.4:6830513-6830532 | MS.gene96337:CDS | 35.0% |
! | CTTCCTAGTTATGATGATGA+TGG | - | chr8.4:6830983-6831002 | MS.gene96337:CDS | 35.0% |
! | TATGGACTTGATTTTGGATG+GGG | - | chr8.4:6830905-6830924 | MS.gene96337:CDS | 35.0% |
!! | AAAGTGGTGGCGATTTTATT+GGG | + | chr8.4:6829876-6829895 | None:intergenic | 35.0% |
!! | CGAGTATTTTAAGAAGCAAG+AGG | - | chr8.4:6830775-6830794 | MS.gene96337:CDS | 35.0% |
!! | GATGATAAAGGGCCATTTTA+TGG | - | chr8.4:6830839-6830858 | MS.gene96337:CDS | 35.0% |
!! | TAGTTTGTTAATCTCACACG+CGG | - | chr8.4:6830172-6830191 | MS.gene96337:CDS | 35.0% |
!! | TGATGATGATGGATCTTTGT+TGG | - | chr8.4:6830994-6831013 | MS.gene96337:CDS | 35.0% |
AAAGAAGTTTATATGGGGCC+AGG | - | chr8.4:6830929-6830948 | MS.gene96337:CDS | 40.0% | |
AATGACCAACCAACTTCACT+TGG | - | chr8.4:6830566-6830585 | MS.gene96337:CDS | 40.0% | |
ACACAAACACCAAGTGAAGT+TGG | + | chr8.4:6830578-6830597 | None:intergenic | 40.0% | |
ACCAACGGAATGTCTTCAAT+TGG | + | chr8.4:6830110-6830129 | None:intergenic | 40.0% | |
AGGTGAAAAGTCACCTAGTT+CGG | + | chr8.4:6830039-6830058 | None:intergenic | 40.0% | |
CATTGCATTTCACTTCTGAG+TGG | - | chr8.4:6830213-6830232 | MS.gene96337:CDS | 40.0% | |
CCAACGGAATGTCTTCAATT+GGG | + | chr8.4:6830109-6830128 | None:intergenic | 40.0% | |
CTACTTGAAGCATACCCTAA+AGG | + | chr8.4:6830704-6830723 | None:intergenic | 40.0% | |
GAAAAACCTAGTAATGGTCG+AGG | - | chr8.4:6830476-6830495 | MS.gene96337:CDS | 40.0% | |
GAAGTGCAAGTAAAGCTAGA+GGG | - | chr8.4:6830537-6830556 | MS.gene96337:CDS | 40.0% | |
GGGGGAAAGAAGTTTATATG+GGG | - | chr8.4:6830924-6830943 | MS.gene96337:CDS | 40.0% | |
GGTATGCTTCAAGTAGGATA+AGG | - | chr8.4:6830708-6830727 | MS.gene96337:CDS | 40.0% | |
GTATAACCTCGACCATTACT+AGG | + | chr8.4:6830485-6830504 | None:intergenic | 40.0% | |
GTCGATTACCATTATCCGAA+TGG | - | chr8.4:6829778-6829797 | MS.gene96337:CDS | 40.0% | |
GTGAGCTGAACAATAACCAA+CGG | + | chr8.4:6830125-6830144 | None:intergenic | 40.0% | |
GTGGAGCCTAATTTACCAAA+AGG | - | chr8.4:6830614-6830633 | MS.gene96337:CDS | 40.0% | |
TGGGAATCCAAATTTAGGAG+TGG | - | chr8.4:6830859-6830878 | MS.gene96337:CDS | 40.0% | |
TTGTTACTCTGTGAGACCAA+TGG | - | chr8.4:6829740-6829759 | MS.gene96337:CDS | 40.0% | |
! | AAACACCAAGTGAAGTTGGT+TGG | + | chr8.4:6830574-6830593 | None:intergenic | 40.0% |
! | AGAAGTGCAAGTAAAGCTAG+AGG | - | chr8.4:6830536-6830555 | MS.gene96337:CDS | 40.0% |
! | ATGGACTTGATTTTGGATGG+GGG | - | chr8.4:6830906-6830925 | MS.gene96337:CDS | 40.0% |
! | GATGTCGATTGCAACTCATT+GGG | - | chr8.4:6829975-6829994 | MS.gene96337:CDS | 40.0% |
! | TGATGTCGATTGCAACTCAT+TGG | - | chr8.4:6829974-6829993 | MS.gene96337:CDS | 40.0% |
!! | AAGTGGTGGCGATTTTATTG+GGG | + | chr8.4:6829875-6829894 | None:intergenic | 40.0% |
!! | CAAAAGGGTATTGTGGGAAT+GGG | - | chr8.4:6830630-6830649 | MS.gene96337:CDS | 40.0% |
!! | CAAAGTGGTGGCGATTTTAT+TGG | + | chr8.4:6829877-6829896 | None:intergenic | 40.0% |
!! | CACTTGGTGTTTGTGTTGAT+TGG | - | chr8.4:6830582-6830601 | MS.gene96337:CDS | 40.0% |
!! | CTTTAGGGTATGCTTCAAGT+AGG | - | chr8.4:6830702-6830721 | MS.gene96337:CDS | 40.0% |
!! | GGTTGCTATTTGTTTGCAAG+AGG | - | chr8.4:6831015-6831034 | MS.gene96337:CDS | 40.0% |
!! | TTGGTGTTTGTGTTGATTGG+AGG | - | chr8.4:6830585-6830604 | MS.gene96337:CDS | 40.0% |
!! | TTGTAGCTACTAGTCTTGCA+GGG | - | chr8.4:6830663-6830682 | MS.gene96337:CDS | 40.0% |
!!! | CAATGTTACTTTTGAGGAGG+AGG | + | chr8.4:6829715-6829734 | None:intergenic | 40.0% |
ATTTCACTTCTGAGTGGGCA+CGG | - | chr8.4:6830219-6830238 | MS.gene96337:CDS | 45.0% | |
CACTAGCTGGTCGTTTACAA+TGG | - | chr8.4:6829934-6829953 | MS.gene96337:CDS | 45.0% | |
CATTGTAAACGACCAGCTAG+TGG | + | chr8.4:6829936-6829955 | None:intergenic | 45.0% | |
CCAATGGAACCAACATGGTA+TGG | - | chr8.4:6829756-6829775 | MS.gene96337:CDS | 45.0% | |
CCAGGAACACATGATTCAGA+TGG | - | chr8.4:6830947-6830966 | MS.gene96337:CDS | 45.0% | |
CCATCTGAATCATGTGTTCC+TGG | + | chr8.4:6830950-6830969 | None:intergenic | 45.0% | |
CCCAATTGAAGACATTCCGT+TGG | - | chr8.4:6830106-6830125 | MS.gene96337:CDS | 45.0% | |
GGTAATCGACCATACCATGT+TGG | + | chr8.4:6829768-6829787 | None:intergenic | 45.0% | |
GTAATGGTCGAGGTTATACG+AGG | - | chr8.4:6830486-6830505 | MS.gene96337:CDS | 45.0% | |
GTATTGTGGGAATGGGACTT+TGG | - | chr8.4:6830637-6830656 | MS.gene96337:CDS | 45.0% | |
TGAGACCAATGGAACCAACA+TGG | - | chr8.4:6829751-6829770 | MS.gene96337:CDS | 45.0% | |
TGTAATCGATGTGCGGGATA+AGG | + | chr8.4:6830082-6830101 | None:intergenic | 45.0% | |
! | CCATTCCCACAATACCCTTT+TGG | + | chr8.4:6830632-6830651 | None:intergenic | 45.0% |
! | CGACCAGCTAGTGGATAAAA+CGG | + | chr8.4:6829927-6829946 | None:intergenic | 45.0% |
! | CTAGTGGATAAAACGGCACA+AGG | + | chr8.4:6829920-6829939 | None:intergenic | 45.0% |
! | TGTTGATTGGAGGAATCGTG+TGG | - | chr8.4:6830595-6830614 | MS.gene96337:CDS | 45.0% |
!! | AGTGGTGGCGATTTTATTGG+GGG | + | chr8.4:6829874-6829893 | None:intergenic | 45.0% |
!! | CCAAAAGGGTATTGTGGGAA+TGG | - | chr8.4:6830629-6830648 | MS.gene96337:CDS | 45.0% |
!! | CCATACCATGTTGGTTCCAT+TGG | + | chr8.4:6829759-6829778 | None:intergenic | 45.0% |
!! | GTTGTAGCTACTAGTCTTGC+AGG | - | chr8.4:6830662-6830681 | MS.gene96337:CDS | 45.0% |
!! | TGTAGCTACTAGTCTTGCAG+GGG | - | chr8.4:6830664-6830683 | MS.gene96337:CDS | 45.0% |
CGATGTGCGGGATAAGGTAA+GGG | + | chr8.4:6830076-6830095 | None:intergenic | 50.0% | |
TCGATGTGCGGGATAAGGTA+AGG | + | chr8.4:6830077-6830096 | None:intergenic | 50.0% | |
TTTACCGCCCCCCACAAAAA+TGG | - | chr8.4:6829841-6829860 | MS.gene96337:CDS | 50.0% | |
!!! | AGGCAAGCCATTTTTGTGGG+GGG | + | chr8.4:6829851-6829870 | None:intergenic | 50.0% |
!!! | GAGGCAAGCCATTTTTGTGG+GGG | + | chr8.4:6829852-6829871 | None:intergenic | 50.0% |
!!! | GGAGGCAAGCCATTTTTGTG+GGG | + | chr8.4:6829853-6829872 | None:intergenic | 50.0% |
!!! | GGGAGGCAAGCCATTTTTGT+GGG | + | chr8.4:6829854-6829873 | None:intergenic | 50.0% |
!!! | GTGCCGTTTTATCCACTAGC+TGG | - | chr8.4:6829921-6829940 | MS.gene96337:CDS | 50.0% |
ATCTCACACGCGGTTGCTGA+TGG | - | chr8.4:6830182-6830201 | MS.gene96337:CDS | 55.0% | |
GGCGTGTGTAATCGATGTGC+GGG | + | chr8.4:6830088-6830107 | None:intergenic | 55.0% | |
GGGCGTGTGTAATCGATGTG+CGG | + | chr8.4:6830089-6830108 | None:intergenic | 55.0% | |
! | GGTGGCGATTTTATTGGGGG+AGG | + | chr8.4:6829871-6829890 | None:intergenic | 55.0% |
!!! | CAAGCCATTTTTGTGGGGGG+CGG | + | chr8.4:6829848-6829867 | None:intergenic | 55.0% |
!!! | GGGGAGGCAAGCCATTTTTG+TGG | + | chr8.4:6829855-6829874 | None:intergenic | 55.0% |
GAGTGGGCACGGCTTGCGCG+TGG | - | chr8.4:6830230-6830249 | MS.gene96337:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 6829699 | 6831084 | 6829699 | ID=MS.gene96337 |
chr8.4 | mRNA | 6829699 | 6831084 | 6829699 | ID=MS.gene96337.t1;Parent=MS.gene96337 |
chr8.4 | exon | 6829699 | 6831084 | 6829699 | ID=MS.gene96337.t1.exon1;Parent=MS.gene96337.t1 |
chr8.4 | CDS | 6829699 | 6831084 | 6829699 | ID=cds.MS.gene96337.t1;Parent=MS.gene96337.t1 |
Gene Sequence |
Protein sequence |