AlfalfaGEDB | MS.gene91612

M. sativa cultivar XinJiangDaYe / MS.gene91612

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016740 GO:0016746 GO:0016747
PFAM: PF02458.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91612.t1	RHN44407.1	72	483	131	3	1	482	1	480	1.10E-194	689.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91612.t1	Q940Z5	36.0	481	276	12	8	479	10	467	2.9e-74	280.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91612.t1	A0A396H0H8	72.0	483	131	3	1	482	1	480	8.0e-195	689.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene021906	MS.gene91612	PPI
MS.gene31542	MS.gene91612	PPI
MS.gene87532	MS.gene91612	PPI
MS.gene91612	MS.gene35740	PPI
MS.gene46265	MS.gene91612	PPI
MS.gene063868	MS.gene91612	PPI
MS.gene31540	MS.gene91612	PPI
MS.gene066658	MS.gene91612	PPI
MS.gene48581	MS.gene91612	PPI
MS.gene043348	MS.gene91612	PPI
MS.gene91612	MS.gene002544	PPI
MS.gene99221	MS.gene91612	PPI
MS.gene03202	MS.gene91612	PPI
MS.gene91612	MS.gene021905	PPI
MS.gene91612	MS.gene070270	PPI
MS.gene91612	MS.gene50382	PPI
MS.gene007831	MS.gene91612	PPI
MS.gene44642	MS.gene91612	PPI
MS.gene56796	MS.gene91612	PPI
MS.gene91609	MS.gene91612	PPI
MS.gene069767	MS.gene91612	PPI
MS.gene91612	MS.gene87191	PPI
MS.gene91612	MS.gene48584	PPI
MS.gene99222	MS.gene91612	PPI
MS.gene60208	MS.gene91612	PPI
MS.gene50355	MS.gene91612	PPI
MS.gene011798	MS.gene91612	PPI
MS.gene48584	MS.gene91612	PPI
MS.gene91612	MS.gene016477	PPI
MS.gene032349	MS.gene91612	PPI
MS.gene91612	MS.gene021913	PPI
MS.gene066656	MS.gene91612	PPI
MS.gene91612	MS.gene02573	PPI
MS.gene066660	MS.gene91612	PPI
MS.gene91612	MS.gene028994	PPI
MS.gene91612	MS.gene91596	PPI
MS.gene44640	MS.gene91612	PPI
MS.gene44463	MS.gene91612	PPI
MS.gene066657	MS.gene91612	PPI
MS.gene56798	MS.gene91612	PPI
MS.gene069422	MS.gene91612	PPI
MS.gene012360	MS.gene91612	PPI
MS.gene35744	MS.gene91612	PPI
MS.gene91612	MS.gene91614	PPI
MS.gene91612	MS.gene91613	PPI
MS.gene44643	MS.gene91612	PPI
MS.gene028999	MS.gene91612	PPI
MS.gene91612	MS.gene043350	PPI
MS.gene50379	MS.gene91612	PPI
MS.gene028998	MS.gene91612	PPI
MS.gene91612	MS.gene56798	PPI
MS.gene31545	MS.gene91612	PPI
MS.gene91612	MS.gene87577	PPI
MS.gene021915	MS.gene91612	PPI
MS.gene91612	MS.gene50384	PPI
MS.gene91611	MS.gene91612	PPI
MS.gene91612	MS.gene96337	PPI
MS.gene021904	MS.gene91612	PPI
MS.gene91612	MS.gene066658	PPI
MS.gene91612	MS.gene87496	PPI
MS.gene91612	MS.gene070019	PPI
MS.gene073299	MS.gene91612	PPI
MS.gene91612	MS.gene021917	PPI
MS.gene50382	MS.gene91612	PPI
MS.gene91597	MS.gene91612	PPI
MS.gene021916	MS.gene91612	PPI
MS.gene32261	MS.gene91612	PPI
MS.gene31546	MS.gene91612	PPI
MS.gene99219	MS.gene91612	PPI
MS.gene021914	MS.gene91612	PPI
MS.gene90496	MS.gene91612	PPI
MS.gene91598	MS.gene91612	PPI
MS.gene56795	MS.gene91612	PPI
MS.gene91612	MS.gene56799	PPI
MS.gene069423	MS.gene91612	PPI
MS.gene78818	MS.gene91612	PPI
MS.gene91612	MS.gene44630	PPI
MS.gene000763	MS.gene91612	PPI
MS.gene91612	MS.gene069767	PPI
MS.gene91612	MS.gene000763	PPI
MS.gene91615	MS.gene91612	PPI
MS.gene91612	MS.gene011716	PPI
MS.gene91612	MS.gene28251	PPI
MS.gene91612	MS.gene91595	PPI
MS.gene38977	MS.gene91612	PPI
MS.gene44633	MS.gene91612	PPI
MS.gene91612	MS.gene016532	PPI
MS.gene91612	MS.gene043352	PPI
MS.gene91612	MS.gene44647	PPI
MS.gene91612	MS.gene066701	PPI
MS.gene99223	MS.gene91612	PPI
MS.gene91612	MS.gene021909	PPI
MS.gene91612	MS.gene50355	PPI
MS.gene90492	MS.gene91612	PPI
MS.gene91614	MS.gene91612	PPI
MS.gene48585	MS.gene91612	PPI
MS.gene011837	MS.gene91612	PPI
MS.gene066634	MS.gene91612	PPI
MS.gene35741	MS.gene91612	PPI
MS.gene043346	MS.gene91612	PPI
MS.gene91599	MS.gene91612	PPI
MS.gene91612	MS.gene011799	PPI
MS.gene91612	MS.gene50420	PPI
MS.gene91612	MS.gene064101	PPI
MS.gene49853	MS.gene91612	PPI
MS.gene063865	MS.gene91612	PPI
MS.gene91612	MS.gene50356	PPI
MS.gene91612	MS.gene87536	PPI
MS.gene91612	MS.gene56797	PPI
MS.gene91612	MS.gene99218	PPI
MS.gene91612	MS.gene069422	PPI
MS.gene021910	MS.gene91612	PPI
MS.gene028996	MS.gene91612	PPI
MS.gene004218	MS.gene91612	PPI
MS.gene28251	MS.gene91612	PPI
MS.gene91613	MS.gene91612	PPI
MS.gene44644	MS.gene91612	PPI
MS.gene35745	MS.gene91612	PPI
MS.gene011796	MS.gene91612	PPI
MS.gene011801	MS.gene91612	PPI
MS.gene87537	MS.gene91612	PPI
MS.gene000764	MS.gene91612	PPI
MS.gene48582	MS.gene91612	PPI
MS.gene90493	MS.gene91612	PPI
MS.gene90491	MS.gene91612	PPI
MS.gene013787	MS.gene91612	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91612.t1	MTR_7g013850	78.099	484	103	3	1	482	1	483	0.0	764
MS.gene91612.t1	MTR_7g014200	57.320	485	184	12	1	479	1	468	0.0	532
MS.gene91612.t1	MTR_7g014160	56.315	483	194	11	5	482	6	476	0.0	528
MS.gene91612.t1	MTR_7g014610	56.996	486	193	10	1	480	1	476	0.0	515
MS.gene91612.t1	MTR_7g014620	50.858	466	191	8	19	482	6	435	1.84e-148	431
MS.gene91612.t1	MTR_6g015315	40.402	448	242	10	32	479	30	452	8.11e-106	323
MS.gene91612.t1	MTR_7g014630	58.511	282	106	7	8	285	9	283	2.23e-104	316
MS.gene91612.t1	MTR_7g014330	40.833	480	251	15	9	480	3	457	3.09e-104	319
MS.gene91612.t1	MTR_6g015320	38.095	483	266	11	1	479	1	454	1.74e-102	314
MS.gene91612.t1	MTR_6g015815	40.295	474	230	12	20	479	26	460	2.51e-102	314
MS.gene91612.t1	MTR_7g014230	40.125	481	255	14	6	478	2	457	5.59e-102	313
MS.gene91612.t1	MTR_6g015850	39.024	492	252	14	1	479	1	457	6.31e-102	313
MS.gene91612.t1	MTR_7g014250	39.627	482	252	15	9	479	3	456	1.20e-101	312
MS.gene91612.t1	MTR_6g015830	38.889	486	248	13	9	479	9	460	1.32e-100	310
MS.gene91612.t1	MTR_3g028210	35.670	485	271	15	8	479	8	464	1.24e-77	250
MS.gene91612.t1	MTR_7g014180	68.156	179	50	5	1	178	1	173	6.03e-73	228
MS.gene91612.t1	MTR_7g014360	34.644	407	220	9	78	480	23	387	5.66e-69	225
MS.gene91612.t1	MTR_2g089765	31.992	497	283	15	8	479	16	482	7.96e-68	225
MS.gene91612.t1	MTR_7g014670	53.571	196	89	2	285	479	65	259	1.31e-65	213
MS.gene91612.t1	MTR_2g089670	32.473	465	273	14	26	479	43	477	2.57e-60	205
MS.gene91612.t1	MTR_2g089735	31.707	451	268	14	41	479	39	461	1.52e-56	195
MS.gene91612.t1	MTR_2g089650	28.283	495	307	14	1	479	1	463	3.21e-55	191
MS.gene91612.t1	MTR_7g015860	29.278	485	279	15	5	465	2	446	4.08e-54	188
MS.gene91612.t1	MTR_3g087640	30.123	488	299	13	9	479	10	472	5.15e-54	188
MS.gene91612.t1	MTR_6g015310	32.010	403	198	12	55	457	7	333	7.68e-54	184
MS.gene91612.t1	MTR_8g012750	28.980	490	306	16	8	477	3	470	2.09e-52	184
MS.gene91612.t1	MTR_2g089755	28.205	468	291	13	28	479	37	475	3.27e-50	178
MS.gene91612.t1	MTR_7g014310	29.912	341	170	8	123	462	34	306	3.05e-40	147
MS.gene91612.t1	MTR_2g089665	26.258	457	200	18	8	452	2	333	1.84e-26	110
MS.gene91612.t1	MTR_3g435300	31.624	234	133	7	9	230	4	222	8.22e-24	101
MS.gene91612.t1	MTR_4g007540	24.256	437	265	16	8	431	3	386	2.66e-23	102
MS.gene91612.t1	MTR_8g075610	24.372	398	238	16	44	431	30	374	5.90e-20	92.4
MS.gene91612.t1	MTR_2g064495	24.230	487	294	21	8	477	3	431	7.17e-19	89.4
MS.gene91612.t1	MTR_3g049150	23.992	496	303	21	8	479	2	447	2.39e-18	87.8
MS.gene91612.t1	MTR_6g045553	23.529	459	267	16	8	431	14	423	3.57e-18	87.4
MS.gene91612.t1	MTR_2g105330	25.270	463	270	22	32	477	28	431	3.77e-18	87.0
MS.gene91612.t1	MTR_7g086000	24.260	507	296	20	8	479	4	457	4.29e-18	87.0
MS.gene91612.t1	MTR_3g026950	23.288	438	271	15	64	476	51	448	7.97e-18	86.3
MS.gene91612.t1	MTR_7g014210	39.252	107	63	2	337	441	24	130	1.98e-17	80.1
MS.gene91612.t1	MTR_8g096530	22.667	450	287	15	39	482	37	431	4.20e-17	84.0
MS.gene91612.t1	MTR_7g014205	37.838	111	57	2	332	441	15	114	1.89e-16	75.9
MS.gene91612.t1	MTR_7g085930	24.286	350	226	13	6	351	4	318	8.45e-16	80.1
MS.gene91612.t1	MTR_4g094835	24.717	441	252	22	13	431	13	395	6.29e-15	77.0
MS.gene91612.t1	MTR_7g014340	44.231	104	46	4	9	107	3	99	1.67e-14	69.7
MS.gene91612.t1	MTR_8g079970	24.580	476	283	21	11	472	8	421	3.31e-14	75.1
MS.gene91612.t1	MTR_4g097090	24.823	423	256	21	26	430	28	406	1.29e-13	73.2
MS.gene91612.t1	MTR_3g098980	22.912	419	259	16	67	474	66	431	1.34e-13	73.2
MS.gene91612.t1	MTR_7g026860	24.538	379	238	12	62	431	50	389	4.45e-13	71.2
MS.gene91612.t1	MTR_7g014220	59.259	54	19	1	22	75	12	62	2.03e-12	63.2
MS.gene91612.t1	MTR_8g079950	23.554	484	278	17	11	472	8	421	3.44e-12	68.6
MS.gene91612.t1	MTR_4g094842	23.426	397	227	17	62	434	57	400	7.84e-12	67.4
MS.gene91612.t1	MTR_8g467580	23.598	428	257	17	17	431	15	385	3.80e-11	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91612.t1	AT5G39050	39.175	485	255	16	8	479	10	467	5.74e-94	293
MS.gene91612.t1	AT5G39080	38.462	481	268	13	1	476	1	458	1.96e-92	288
MS.gene91612.t1	AT3G29590	38.000	500	237	14	1	479	1	448	2.21e-90	283
MS.gene91612.t1	AT3G29670	38.462	481	253	14	8	479	3	449	4.72e-89	280
MS.gene91612.t1	AT5G39090	36.897	477	263	12	6	479	6	447	1.42e-88	278
MS.gene91612.t1	AT3G29635	37.474	483	260	13	8	479	3	454	5.89e-86	271
MS.gene91612.t1	AT5G61160	33.544	474	283	11	8	477	3	448	6.70e-74	240
MS.gene91612.t1	AT3G29680	35.244	471	273	11	6	475	4	443	1.11e-73	239
MS.gene91612.t1	AT1G03940	30.862	499	274	15	9	479	9	464	3.28e-66	221
MS.gene91612.t1	AT1G03495	31.507	365	207	14	10	362	10	343	3.87e-42	153
MS.gene91612.t1	AT5G23940	24.834	451	281	18	7	441	2	410	7.84e-23	101
MS.gene91612.t1	AT5G48930	24.201	438	266	17	7	431	2	386	1.93e-21	97.1
MS.gene91612.t1	AT2G19070	23.515	421	265	15	26	430	23	402	7.70e-20	92.4
MS.gene91612.t1	AT5G57840	23.457	486	310	17	7	479	2	438	2.82e-18	87.4
MS.gene91612.t1	AT3G29690	33.113	151	95	2	330	479	33	178	2.57e-17	80.1
MS.gene91612.t1	AT3G29720	34.078	179	90	6	130	305	48	201	3.43e-17	80.9
MS.gene91612.t1	AT3G50280	23.239	426	271	13	19	435	18	396	4.16e-17	84.0
MS.gene91612.t1	AT3G50300	24.270	445	259	17	5	435	16	396	1.01e-14	76.6
MS.gene91612.t1	AT4G31910	22.222	369	251	9	44	410	46	380	1.19e-13	73.2
MS.gene91612.t1	AT5G38130	21.315	441	276	17	8	431	24	410	7.22e-13	70.9
MS.gene91612.t1	AT5G07850	22.545	448	289	17	1	434	1	404	1.68e-12	69.7

Find 67 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAGGTTGTGATTGTGAATT+TGG	0.148932	7.4:+85121184	None:intergenic
TGTTTCCTTCGATAAAATTT+TGG	0.171407	7.4:-85120984	MS.gene91612:CDS
GAGAGTGAAGATTTGAGTTT+TGG	0.216722	7.4:+85121139	None:intergenic
TACTACTCCCCTTTCCAAAA+AGG	0.234267	7.4:+85120706	None:intergenic
AATTGAGAGGGAGAGATAAT+TGG	0.254446	7.4:+85121266	None:intergenic
TCAATTTCTTTGACTTGATT+TGG	0.263742	7.4:-85121249	MS.gene91612:CDS
CTTTAGCTGGTAACATTGTT+TGG	0.271388	7.4:-85121093	MS.gene91612:CDS
GGAGTATATGAGATTGATTT+TGG	0.276059	7.4:-85120074	MS.gene91612:CDS
CGAACAGAATCCTTAACTTT+TGG	0.279952	7.4:+85120572	None:intergenic
GAGCGACGTGAGAAGCTTAA+AGG	0.292976	7.4:-85120615	MS.gene91612:CDS
GATAATTGGTTTGCAGAGTT+AGG	0.302514	7.4:+85121280	None:intergenic
TTTGAGAGTGTGTTCATAAA+TGG	0.312099	7.4:-85120668	MS.gene91612:CDS
ATTGATAGAGGATTAACTAT+TGG	0.313217	7.4:-85120017	MS.gene91612:CDS
GACATTGATGTCTAGATATA+TGG	0.316089	7.4:-85120150	MS.gene91612:CDS
TCCAAATGGTACATTGTAAA+AGG	0.320135	7.4:-85120494	MS.gene91612:CDS
CATCTTCATTTGGATTGAAC+TGG	0.323194	7.4:+85121044	None:intergenic
TTGAAAGCTGGTGTTGAGTT+TGG	0.327119	7.4:-85119975	MS.gene91612:CDS
TGAAAGCTGGTGTTGAGTTT+GGG	0.345659	7.4:-85119974	MS.gene91612:CDS
ATTGTTGCTAATAAAATATA+TGG	0.377503	7.4:-85120215	MS.gene91612:CDS
GTTCAAGGAATAGGAGTTGC+AGG	0.381644	7.4:-85120110	MS.gene91612:CDS
AACAAAAGTTGACAATCTCT+TGG	0.389956	7.4:+85120445	None:intergenic
AACACACTCTCAAAATCATT+TGG	0.390399	7.4:+85120677	None:intergenic
CTTATTTGAACCAAAAGTTA+AGG	0.392963	7.4:-85120582	MS.gene91612:CDS
CCAGTTCCTGAAAACTACTT+TGG	0.404805	7.4:-85120305	MS.gene91612:CDS
AAGGAAACTCCATCTTCATT+TGG	0.406411	7.4:+85121034	None:intergenic
ATTTAGAGAAATTAAACAAA+AGG	0.406967	7.4:-85120523	MS.gene91612:CDS
ACACACCATGCTGTTCTTGA+TGG	0.421878	7.4:-85120827	MS.gene91612:CDS
TAGAAGAAGATACGTTCAAC+TGG	0.427345	7.4:+85121214	None:intergenic
ATGGATAAGGGTGTTCTTGA+TGG	0.428466	7.4:-85120179	MS.gene91612:CDS
AAGGTTGTGATTGTGAATTT+GGG	0.435601	7.4:+85121185	None:intergenic
ACAAAAGGGTGTTGTCCAAA+TGG	0.444540	7.4:-85120508	MS.gene91612:CDS
GTTGCAGGGTCAACAAGGTT+TGG	0.454958	7.4:-85120095	MS.gene91612:CDS
GAGATTACTTCAATTGATAG+AGG	0.456941	7.4:-85120029	MS.gene91612:CDS
GGTGAAGGAGTTCAAGGAAT+AGG	0.458297	7.4:-85120119	MS.gene91612:CDS
TTTAGAGAAATTAAACAAAA+GGG	0.466166	7.4:-85120522	MS.gene91612:CDS
ACAAAAGTTGACAATCTCTT+GGG	0.469305	7.4:+85120446	None:intergenic
TTTGGAAAGGGGAGTAGTAA+AGG	0.470773	7.4:-85120702	MS.gene91612:CDS
ATCAAGTCAAAGAAATTGAG+AGG	0.478183	7.4:+85121253	None:intergenic
GAGAAACTTTGCATTGTTCA+CGG	0.484129	7.4:+85121302	None:intergenic
GAAAGTAGAGATTTGAAAGC+TGG	0.485372	7.4:-85119987	MS.gene91612:CDS
ATACTTGGTGAAGGAGTTCA+AGG	0.485925	7.4:-85120125	MS.gene91612:CDS
TTTGGATTGAACTGGATGAC+TGG	0.500975	7.4:+85121052	None:intergenic
TCTTTGACTTGATTTGGCTA+AGG	0.509886	7.4:-85121243	MS.gene91612:CDS
CCACCATGTTCATCAAAGCT+TGG	0.513622	7.4:-85120796	MS.gene91612:CDS
CAGTTCAATCCAAATGAAGA+TGG	0.521842	7.4:-85121043	MS.gene91612:CDS
TCTAGATATATGGCTATACT+TGG	0.526446	7.4:-85120140	MS.gene91612:CDS
CAAACAATGTTACCAGCTAA+AGG	0.530448	7.4:+85121094	None:intergenic
TTGAAAAGATTTACATACAG+AGG	0.568365	7.4:+85120772	None:intergenic
AGAGTGTGTTCATAAATGGT+TGG	0.574509	7.4:-85120664	MS.gene91612:CDS
TGTTCTTGATAAGCATGTGA+TGG	0.582226	7.4:-85119949	MS.gene91612:CDS
CAATGTTACCAGCTAAAGGT+AGG	0.587517	7.4:+85121098	None:intergenic
AGTTAAGGATTCTGTTCGAG+TGG	0.595736	7.4:-85120567	MS.gene91612:CDS
GAATCTGTTGATTCTAAGTG+AGG	0.596592	7.4:+85120917	None:intergenic
ATCACATTGTGCTAAGAGCA+AGG	0.601058	7.4:+85121015	None:intergenic
TTGCTCTTAGCACAATGTGA+TGG	0.612058	7.4:-85121013	MS.gene91612:CDS
TTGTGATTGTGAATTTGGGA+GGG	0.613851	7.4:+85121189	None:intergenic
TAGGAGTTGCAGGGTCAACA+AGG	0.619039	7.4:-85120100	MS.gene91612:CDS
TATATGGCTATACTTGGTGA+AGG	0.621182	7.4:-85120134	MS.gene91612:CDS
GGACCAAGCTTTGATGAACA+TGG	0.630307	7.4:+85120793	None:intergenic
CGAGACAAAGAAGCTTCTTG+TGG	0.639859	7.4:+85120950	None:intergenic
GTTGTGATTGTGAATTTGGG+AGG	0.643550	7.4:+85121188	None:intergenic
ATGGTGTGTGCTTATTCCAA+TGG	0.644576	7.4:+85120841	None:intergenic
TCAAGTCAAAGAAATTGAGA+GGG	0.648902	7.4:+85121254	None:intergenic
TTCAAGGAATAGGAGTTGCA+GGG	0.658447	7.4:-85120109	MS.gene91612:CDS
AGAAGAAGATACGTTCAACT+GGG	0.672104	7.4:+85121215	None:intergenic
GTGGCATTCGAGCTCACACG+CGG	0.697073	7.4:-85120548	MS.gene91612:CDS
CCAAGCTTTGATGAACATGG+TGG	0.697760	7.4:+85120796	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTGTTGCTAATAAAATATA+TGG	-	chr7.4:85121021-85121040	MS.gene91612:CDS	15.0%
!!	ATTTAGAGAAATTAAACAAA+AGG	-	chr7.4:85120713-85120732	MS.gene91612:CDS	15.0%
!!	TTTAGAGAAATTAAACAAAA+GGG	-	chr7.4:85120714-85120733	MS.gene91612:CDS	15.0%
!!	ATATGGTAAAACAAAAATGA+TGG	-	chr7.4:85121038-85121057	MS.gene91612:CDS	20.0%
!!	TCTAAAAAAGGATCTAAATT+TGG	+	chr7.4:85120508-85120527	None:intergenic	20.0%
!!!	AAAACAAAAATGATGGATAA+GGG	-	chr7.4:85121045-85121064	MS.gene91612:CDS	20.0%
!!!	TAAAACAAAAATGATGGATA+AGG	-	chr7.4:85121044-85121063	MS.gene91612:CDS	20.0%
!	ATTGATAGAGGATTAACTAT+TGG	-	chr7.4:85121219-85121238	MS.gene91612:CDS	25.0%
!	CTTATTTGAACCAAAAGTTA+AGG	-	chr7.4:85120654-85120673	MS.gene91612:CDS	25.0%
!	TTGAAAAGATTTACATACAG+AGG	+	chr7.4:85120467-85120486	None:intergenic	25.0%
!!	AATAACCCTTTTTCCAAAAA+AGG	-	chr7.4:85120366-85120385	MS.gene91612:CDS	25.0%
!!	AGGTTTTCAAAAAAGAAAGA+AGG	+	chr7.4:85120073-85120092	None:intergenic	25.0%
!!	ATAACCCTTTTTCCAAAAAA+GGG	-	chr7.4:85120367-85120386	MS.gene91612:CDS	25.0%
!!	TGTTTCCTTCGATAAAATTT+TGG	-	chr7.4:85120252-85120271	MS.gene91612:CDS	25.0%
!!!	AAAAACCCTTTTTTGGAAAA+AGG	+	chr7.4:85120375-85120394	None:intergenic	25.0%
!!!	AAAACCCTTTTTTGGAAAAA+GGG	+	chr7.4:85120374-85120393	None:intergenic	25.0%
!!!	TATGAGATTGATTTTGGTTT+TGG	-	chr7.4:85121168-85121187	MS.gene91612:CDS	25.0%
!!!	TCAATTTCTTTGACTTGATT+TGG	-	chr7.4:85119987-85120006	MS.gene91612:CDS	25.0%
!!!	TTCATTCTCTTTTTCATGAA+GGG	-	chr7.4:85121316-85121335	MS.gene91612:CDS	25.0%
!!!	TTTCATTCTCTTTTTCATGA+AGG	-	chr7.4:85121315-85121334	MS.gene91612:CDS	25.0%
	AACAAAAGTTGACAATCTCT+TGG	+	chr7.4:85120794-85120813	None:intergenic	30.0%
	AACACACTCTCAAAATCATT+TGG	+	chr7.4:85120562-85120581	None:intergenic	30.0%
	AAGGTTGTGATTGTGAATTT+GGG	+	chr7.4:85120054-85120073	None:intergenic	30.0%
	ACAAAAGTTGACAATCTCTT+GGG	+	chr7.4:85120793-85120812	None:intergenic	30.0%
	ATCAAGTCAAAGAAATTGAG+AGG	+	chr7.4:85119986-85120005	None:intergenic	30.0%
	GACATTGATGTCTAGATATA+TGG	-	chr7.4:85121086-85121105	MS.gene91612:CDS	30.0%
	GAGATTACTTCAATTGATAG+AGG	-	chr7.4:85121207-85121226	MS.gene91612:CDS	30.0%
	TCAAGTCAAAGAAATTGAGA+GGG	+	chr7.4:85119985-85120004	None:intergenic	30.0%
	TCCAAATGGTACATTGTAAA+AGG	-	chr7.4:85120742-85120761	MS.gene91612:CDS	30.0%
	TCTAGATATATGGCTATACT+TGG	-	chr7.4:85121096-85121115	MS.gene91612:CDS	30.0%
!	CAATTTCCAAAGTAGTTTTC+AGG	+	chr7.4:85120940-85120959	None:intergenic	30.0%
!	GATGATTTTACAAAGGAAGA+TGG	-	chr7.4:85120991-85121010	MS.gene91612:CDS	30.0%
!	TCCTTTTACAATGTACCATT+TGG	+	chr7.4:85120746-85120765	None:intergenic	30.0%
!	TGAGTCAGATGATTTTACAA+AGG	-	chr7.4:85120984-85121003	MS.gene91612:CDS	30.0%
!	TTTGAGAGTGTGTTCATAAA+TGG	-	chr7.4:85120568-85120587	MS.gene91612:CDS	30.0%
!	TTTTACAAAGGAAGATGGTT+TGG	-	chr7.4:85120996-85121015	MS.gene91612:CDS	30.0%
!!	GGAGTATATGAGATTGATTT+TGG	-	chr7.4:85121162-85121181	MS.gene91612:CDS	30.0%
!!	TAAAGGTAGGAATTTTTGGA+GGG	+	chr7.4:85120128-85120147	None:intergenic	30.0%
!!	TCCAAAAAGGGTTCTAAAAA+AGG	+	chr7.4:85120520-85120539	None:intergenic	30.0%
!!	TTTAGAACCCTTTTTGGAAA+GGG	-	chr7.4:85120522-85120541	MS.gene91612:CDS	30.0%
!!!	AAGATTTGAGTTTTGGAACA+AGG	+	chr7.4:85120093-85120112	None:intergenic	30.0%
!!!	ACTGGTTTTGAAGAATTAGA+AGG	+	chr7.4:85120169-85120188	None:intergenic	30.0%
!!!	AGATTGATTTTGGTTTTGGA+AGG	-	chr7.4:85121172-85121191	MS.gene91612:CDS	30.0%
!!!	TCCTTTTTTAGAACCCTTTT+TGG	-	chr7.4:85120516-85120535	MS.gene91612:CDS	30.0%
!!!	TTTTAGAACCCTTTTTGGAA+AGG	-	chr7.4:85120521-85120540	MS.gene91612:CDS	30.0%
	AAGGAAACTCCATCTTCATT+TGG	+	chr7.4:85120205-85120224	None:intergenic	35.0%
	AATTGAGAGGGAGAGATAAT+TGG	+	chr7.4:85119973-85119992	None:intergenic	35.0%
	AGAAGAAGATACGTTCAACT+GGG	+	chr7.4:85120024-85120043	None:intergenic	35.0%
	AGAGTGTGTTCATAAATGGT+TGG	-	chr7.4:85120572-85120591	MS.gene91612:CDS	35.0%
	CAAAAATTCCTACCTTTAGC+TGG	-	chr7.4:85120130-85120149	MS.gene91612:CDS	35.0%
	CAAACAATGTTACCAGCTAA+AGG	+	chr7.4:85120145-85120164	None:intergenic	35.0%
	CAGTTCAATCCAAATGAAGA+TGG	-	chr7.4:85120193-85120212	MS.gene91612:CDS	35.0%
	CATCTTCATTTGGATTGAAC+TGG	+	chr7.4:85120195-85120214	None:intergenic	35.0%
	CTTTAGCTGGTAACATTGTT+TGG	-	chr7.4:85120143-85120162	MS.gene91612:CDS	35.0%
	GAAAGTAGAGATTTGAAAGC+TGG	-	chr7.4:85121249-85121268	MS.gene91612:CDS	35.0%
	GAAGGTTGTGATTGTGAATT+TGG	+	chr7.4:85120055-85120074	None:intergenic	35.0%
	GAGAAACTTTGCATTGTTCA+CGG	+	chr7.4:85119937-85119956	None:intergenic	35.0%
	TAGAAGAAGATACGTTCAAC+TGG	+	chr7.4:85120025-85120044	None:intergenic	35.0%
	TGTTCTTGATAAGCATGTGA+TGG	-	chr7.4:85121287-85121306	MS.gene91612:CDS	35.0%
	TTGTGATTGTGAATTTGGGA+GGG	+	chr7.4:85120050-85120069	None:intergenic	35.0%
!	ATTTTCCATCAAGAACAGCA+TGG	+	chr7.4:85120417-85120436	None:intergenic	35.0%
!	CAGCTAAAGGTAGGAATTTT+TGG	+	chr7.4:85120132-85120151	None:intergenic	35.0%
!	CCAAAAAAGGGTTTTTCCAT+TGG	-	chr7.4:85120379-85120398	MS.gene91612:CDS	35.0%
!	CGAACAGAATCCTTAACTTT+TGG	+	chr7.4:85120667-85120686	None:intergenic	35.0%
!	GTGCTCCAAAATTTTATCGA+AGG	+	chr7.4:85120260-85120279	None:intergenic	35.0%
!	TATATGGCTATACTTGGTGA+AGG	-	chr7.4:85121102-85121121	MS.gene91612:CDS	35.0%
!!	ATTGTTCACGGATTTTGATG+CGG	+	chr7.4:85119925-85119944	None:intergenic	35.0%
!!	CTAAAGGTAGGAATTTTTGG+AGG	+	chr7.4:85120129-85120148	None:intergenic	35.0%
!!	GAATCTGTTGATTCTAAGTG+AGG	+	chr7.4:85120322-85120341	None:intergenic	35.0%
!!	GAGAGTGAAGATTTGAGTTT+TGG	+	chr7.4:85120100-85120119	None:intergenic	35.0%
!!	GATAATTGGTTTGCAGAGTT+AGG	+	chr7.4:85119959-85119978	None:intergenic	35.0%
!!	TCTTTGACTTGATTTGGCTA+AGG	-	chr7.4:85119993-85120012	MS.gene91612:CDS	35.0%
!!	TTAGAACCCTTTTTGGAAAG+GGG	-	chr7.4:85120523-85120542	MS.gene91612:CDS	35.0%
!!!	CCAATGGAAAAACCCTTTTT+TGG	+	chr7.4:85120382-85120401	None:intergenic	35.0%
	ACTACTCCCCTTTCCAAAAA+GGG	+	chr7.4:85120532-85120551	None:intergenic	40.0%
	AGTTAAGGATTCTGTTCGAG+TGG	-	chr7.4:85120669-85120688	MS.gene91612:CDS	40.0%
	ATCACATTGTGCTAAGAGCA+AGG	+	chr7.4:85120224-85120243	None:intergenic	40.0%
	ATGGTGTGTGCTTATTCCAA+TGG	+	chr7.4:85120398-85120417	None:intergenic	40.0%
	CAATGTTACCAGCTAAAGGT+AGG	+	chr7.4:85120141-85120160	None:intergenic	40.0%
	CCAGTTCCTGAAAACTACTT+TGG	-	chr7.4:85120931-85120950	MS.gene91612:CDS	40.0%
	GTTGTGATTGTGAATTTGGG+AGG	+	chr7.4:85120051-85120070	None:intergenic	40.0%
	TACTACTCCCCTTTCCAAAA+AGG	+	chr7.4:85120533-85120552	None:intergenic	40.0%
	TTCAAGGAATAGGAGTTGCA+GGG	-	chr7.4:85121127-85121146	MS.gene91612:CDS	40.0%
	TTGCTCTTAGCACAATGTGA+TGG	-	chr7.4:85120223-85120242	MS.gene91612:CDS	40.0%
	TTTGGAAAGGGGAGTAGTAA+AGG	-	chr7.4:85120534-85120553	MS.gene91612:CDS	40.0%
	TTTGGATTGAACTGGATGAC+TGG	+	chr7.4:85120187-85120206	None:intergenic	40.0%
!	ATACTTGGTGAAGGAGTTCA+AGG	-	chr7.4:85121111-85121130	MS.gene91612:CDS	40.0%
!	TGAAAGCTGGTGTTGAGTTT+GGG	-	chr7.4:85121262-85121281	MS.gene91612:CDS	40.0%
!	TTGAAAGCTGGTGTTGAGTT+TGG	-	chr7.4:85121261-85121280	MS.gene91612:CDS	40.0%
!!	AAGTAGTTTTCAGGAACTGG+TGG	+	chr7.4:85120931-85120950	None:intergenic	40.0%
!!	ACAAAAGGGTGTTGTCCAAA+TGG	-	chr7.4:85120728-85120747	MS.gene91612:CDS	40.0%
!!	ATGGATAAGGGTGTTCTTGA+TGG	-	chr7.4:85121057-85121076	MS.gene91612:CDS	40.0%
!!	CCAAAGTAGTTTTCAGGAAC+TGG	+	chr7.4:85120934-85120953	None:intergenic	40.0%
!!	GAAGTAATCTCCACTTTTCC+AGG	+	chr7.4:85121198-85121217	None:intergenic	40.0%
	ACACACCATGCTGTTCTTGA+TGG	-	chr7.4:85120409-85120428	MS.gene91612:CDS	45.0%
	CCACCATGTTCATCAAAGCT+TGG	-	chr7.4:85120440-85120459	MS.gene91612:CDS	45.0%
	CGAGACAAAGAAGCTTCTTG+TGG	+	chr7.4:85120289-85120308	None:intergenic	45.0%
	GGTGAAGGAGTTCAAGGAAT+AGG	-	chr7.4:85121117-85121136	MS.gene91612:CDS	45.0%
	GTTCAAGGAATAGGAGTTGC+AGG	-	chr7.4:85121126-85121145	MS.gene91612:CDS	45.0%
!	CCAAGCTTTGATGAACATGG+TGG	+	chr7.4:85120443-85120462	None:intergenic	45.0%
!	GGACCAAGCTTTGATGAACA+TGG	+	chr7.4:85120446-85120465	None:intergenic	45.0%
!!	CGGATTTTGATGCGGTTGTT+TGG	+	chr7.4:85119917-85119936	None:intergenic	45.0%
!!	TTTTGGAAGGCCTGGAAAAG+TGG	-	chr7.4:85121185-85121204	MS.gene91612:CDS	45.0%
!!!	GATTTTGGTTTTGGAAGGCC+TGG	-	chr7.4:85121177-85121196	MS.gene91612:CDS	45.0%
	GAGCGACGTGAGAAGCTTAA+AGG	-	chr7.4:85120621-85120640	MS.gene91612:CDS	50.0%
	GTTGCAGGGTCAACAAGGTT+TGG	-	chr7.4:85121141-85121160	MS.gene91612:CDS	50.0%
	TAGGAGTTGCAGGGTCAACA+AGG	-	chr7.4:85121136-85121155	MS.gene91612:CDS	50.0%
	GTGGCATTCGAGCTCACACG+CGG	-	chr7.4:85120688-85120707	MS.gene91612:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.4	gene	85119905	85121353	85119905	ID=MS.gene91612
chr7.4	mRNA	85119905	85121353	85119905	ID=MS.gene91612.t1;Parent=MS.gene91612
chr7.4	exon	85119905	85121353	85119905	ID=MS.gene91612.t1.exon1;Parent=MS.gene91612.t1
chr7.4	CDS	85119905	85121353	85119905	ID=cds.MS.gene91612.t1;Parent=MS.gene91612.t1

Gene Sequence

>MS.gene91612

ATGACTTCTCCAAACAACCGCATCAAAATCCGTGAACAATGCAAAGTTTCTCCTAACTCTGCAAACCAATTATCTCTCCCTCTCAATTTCTTTGACTTGATTTGGCTAAGGTTTCACCCAGTTGAACGTATCTTCTTCTACACCCTCCCAAATTCACAATCACAACCTTCTTTCTTTTTTGAAAACCTTGTTCCAAAACTCAAATCTTCACTCTCTTTAACCCTCCAAAAATTCCTACCTTTAGCTGGTAACATTGTTTGGCCTTCTAATTCTTCAAAACCAGTCATCCAGTTCAATCCAAATGAAGATGGAGTTTCCTTGCTCTTAGCACAATGTGATGGTGATATTGTTTCCTTCGATAAAATTTTGGAGCACAAATCACCACAAGAAGCTTCTTTGTCTCGTTTGTTTGTACCTCACTTAGAATCAACAGATTCTTTTGCTTCTATTATTTCAATTCAAATAACCCTTTTTCCAAAAAAGGGTTTTTCCATTGGAATAAGCACACACCATGCTGTTCTTGATGGAAAATCTTCCACCATGTTCATCAAAGCTTGGTCCTCTGTATGTAAATCTTTTCAAGAAGAAGAAACACAATCACCAAATTTAGATCCTTTTTTAGAACCCTTTTTGGAAAGGGGAGTAGTAAAGGATCCAAATGATTTTGAGAGTGTGTTCATAAATGGTTGGAACAAAATCTCATCACATTTTGATAAGAGCGACGTGAGAAGCTTAAAGGTAATGTCAAACTTATTTGAACCAAAAGTTAAGGATTCTGTTCGAGTGGCATTCGAGCTCACACGCGGAGATTTAGAGAAATTAAACAAAAGGGTGTTGTCCAAATGGTACATTGTAAAAGGAGCACAAGAACAAGAACAAGAACAACCCAAGAGATTGTCAACTTTTGTTCTTACATGTGCTTATGTTTCTGTTTGCATAGCTAAAGCGAAACAACAATCTGAAAGCAATCACAAACAAAAATTTTGTTTTTATTTTTCAGTTGATTGCAGATCAAGATTAGATCCACCAGTTCCTGAAAACTACTTTGGAAATTGTCTACGTAATCATATAGTTAATGCTGAGTCAGATGATTTTACAAAGGAAGATGGTTTGGTAATTGTTGCTAATAAAATATATGGTAAAACAAAAATGATGGATAAGGGTGTTCTTGATGGAATAGAGACATTGATGTCTAGATATATGGCTATACTTGGTGAAGGAGTTCAAGGAATAGGAGTTGCAGGGTCAACAAGGTTTGGAGTATATGAGATTGATTTTGGTTTTGGAAGGCCTGGAAAAGTGGAGATTACTTCAATTGATAGAGGATTAACTATTGGATTAACAGAAAGTAGAGATTTGAAAGCTGGTGTTGAGTTTGGGCTTGTTCTTGATAAGCATGTGATGGATGTGTTTCATTCTCTTTTTCATGAAGGGCTATGTTTTGATTGA

Protein sequence

>MS.gene91612.t1

MTSPNNRIKIREQCKVSPNSANQLSLPLNFFDLIWLRFHPVERIFFYTLPNSQSQPSFFFENLVPKLKSSLSLTLQKFLPLAGNIVWPSNSSKPVIQFNPNEDGVSLLLAQCDGDIVSFDKILEHKSPQEASLSRLFVPHLESTDSFASIISIQITLFPKKGFSIGISTHHAVLDGKSSTMFIKAWSSVCKSFQEEETQSPNLDPFLEPFLERGVVKDPNDFESVFINGWNKISSHFDKSDVRSLKVMSNLFEPKVKDSVRVAFELTRGDLEKLNKRVLSKWYIVKGAQEQEQEQPKRLSTFVLTCAYVSVCIAKAKQQSESNHKQKFCFYFSVDCRSRLDPPVPENYFGNCLRNHIVNAESDDFTKEDGLVIVANKIYGKTKMMDKGVLDGIETLMSRYMAILGEGVQGIGVAGSTRFGVYEIDFGFGRPGKVEITSIDRGLTIGLTESRDLKAGVEFGLVLDKHVMDVFHSLFHEGLCFD