AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene004218

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004218.t1 MTR_2g015430 94.432 449 25 0 1 449 1 449 0.0 890
MS.gene004218.t1 MTR_4g055170 33.188 458 270 15 2 437 12 455 2.21e-74 241
MS.gene004218.t1 MTR_3g465990 32.747 455 278 15 1 435 9 455 2.37e-73 238
MS.gene004218.t1 MTR_3g465980 32.308 455 280 15 1 435 9 455 7.54e-70 229
MS.gene004218.t1 MTR_3g465910 31.602 462 281 15 2 438 8 459 1.21e-68 228
MS.gene004218.t1 MTR_3g465880 32.104 461 278 16 2 435 10 462 5.34e-64 214
MS.gene004218.t1 MTR_3g465930 30.263 456 292 14 2 435 8 459 1.19e-63 213
MS.gene004218.t1 MTR_6g053810 29.565 460 290 12 2 435 9 460 7.33e-62 208
MS.gene004218.t1 MTR_3g465950 31.579 418 257 13 2 402 8 413 1.60e-58 199
MS.gene004218.t1 MTR_8g096530 29.797 443 282 15 2 436 7 428 5.21e-49 173
MS.gene004218.t1 MTR_3g098980 31.719 413 260 14 25 432 35 430 7.40e-47 167
MS.gene004218.t1 MTR_1g053315 30.361 415 244 17 16 404 33 428 9.29e-47 168
MS.gene004218.t1 MTR_5g076700 29.647 425 268 12 25 438 31 435 4.27e-44 160
MS.gene004218.t1 MTR_7g027175 30.549 419 266 15 25 436 37 437 1.51e-43 158
MS.gene004218.t1 MTR_1g081660 30.047 426 262 12 25 434 39 444 2.06e-43 158
MS.gene004218.t1 MTR_3g071320 31.209 455 250 17 2 427 5 425 1.43e-42 155
MS.gene004218.t1 MTR_3g465870 27.313 454 271 15 2 438 12 423 3.72e-42 154
MS.gene004218.t1 MTR_7g114520 28.822 399 262 9 53 441 61 447 2.97e-41 153
MS.gene004218.t1 MTR_1g040175 29.187 418 279 13 2 412 9 416 5.59e-41 152
MS.gene004218.t1 MTR_1g040215 30.051 396 260 13 25 412 30 416 3.26e-40 150
MS.gene004218.t1 MTR_7g114470 29.942 344 227 7 48 384 56 392 1.91e-38 145
MS.gene004218.t1 MTR_8g075610 28.851 409 265 15 33 432 24 415 1.61e-37 142
MS.gene004218.t1 MTR_2g064495 29.950 404 256 16 1 390 2 392 1.63e-37 142
MS.gene004218.t1 MTR_3g112180 28.738 428 269 13 21 435 29 433 6.64e-37 140
MS.gene004218.t1 MTR_2g105330 30.270 370 236 13 33 390 33 392 9.60e-37 140
MS.gene004218.t1 MTR_7g110610 29.442 394 214 15 6 394 9 343 1.32e-35 136
MS.gene004218.t1 MTR_3g049150 28.842 423 237 16 1 383 1 399 1.61e-34 134
MS.gene004218.t1 MTR_4g007540 28.040 403 266 14 1 390 2 393 2.48e-34 133
MS.gene004218.t1 MTR_7g114550 29.367 395 250 12 53 438 60 434 4.02e-34 133
MS.gene004218.t1 MTR_7g114560 27.765 425 275 13 25 438 31 434 2.16e-33 131
MS.gene004218.t1 MTR_1g040320 28.846 416 247 12 2 412 9 380 2.76e-33 130
MS.gene004218.t1 MTR_7g114490 27.840 449 274 16 5 430 12 433 2.79e-33 131
MS.gene004218.t1 MTR_1g040195 28.610 367 248 11 72 434 55 411 3.63e-32 127
MS.gene004218.t1 MTR_7g086000 28.604 437 231 18 56 441 58 464 7.04e-32 127
MS.gene004218.t1 MTR_4g127650 27.816 435 274 13 23 431 29 449 4.85e-31 124
MS.gene004218.t1 MTR_7g085930 27.335 439 245 19 1 388 5 420 5.05e-30 122
MS.gene004218.t1 MTR_7g084940 26.000 400 267 13 2 389 16 398 1.99e-29 119
MS.gene004218.t1 MTR_1g040315 26.634 413 250 13 25 434 30 392 2.89e-28 116
MS.gene004218.t1 MTR_4g097090 26.705 352 229 9 56 384 63 408 1.20e-27 115
MS.gene004218.t1 MTR_7g085990 26.415 371 224 14 58 388 55 416 7.55e-27 112
MS.gene004218.t1 MTR_3g026950 26.877 413 252 15 10 384 4 404 3.00e-26 110
MS.gene004218.t1 MTR_7g084910 26.185 401 251 15 2 389 17 385 3.34e-26 110
MS.gene004218.t1 MTR_7g114510 28.707 317 191 10 141 441 8 305 9.19e-26 107
MS.gene004218.t1 MTR_7g056087 26.933 375 232 13 61 404 61 424 5.37e-24 104
MS.gene004218.t1 MTR_0502s0010 31.579 247 150 8 96 333 2 238 2.45e-22 95.9
MS.gene004218.t1 MTR_0042s0190 28.947 228 155 6 159 384 1 223 9.59e-22 95.5
MS.gene004218.t1 MTR_3g086020 23.618 398 245 15 56 438 59 412 2.36e-20 93.2
MS.gene004218.t1 MTR_5g090810 23.810 399 262 15 18 384 24 412 5.25e-20 92.4
MS.gene004218.t1 MTR_5g090830 24.060 399 261 15 18 384 24 412 2.19e-19 90.9
MS.gene004218.t1 MTR_7g013850 23.869 398 238 13 44 386 48 435 7.70e-19 89.0
MS.gene004218.t1 MTR_3g101960 26.102 295 202 9 61 346 71 358 9.24e-18 85.9
MS.gene004218.t1 MTR_3g049140 30.058 173 102 6 230 384 26 197 1.40e-17 82.4
MS.gene004218.t1 MTR_7g114420 28.772 285 152 12 161 438 3 243 2.09e-17 82.4
MS.gene004218.t1 MTR_0190s0020 25.568 352 231 11 58 392 63 400 2.20e-17 84.3
MS.gene004218.t1 MTR_7g014200 23.246 456 281 17 22 430 27 460 1.88e-16 81.6
MS.gene004218.t1 MTR_3g102020 25.333 300 198 10 61 346 72 359 2.36e-16 81.3
MS.gene004218.t1 MTR_7g014160 22.406 424 286 11 2 386 9 428 3.25e-16 80.9
MS.gene004218.t1 MTR_3g102010 25.574 305 197 12 61 345 68 362 5.91e-16 80.1
MS.gene004218.t1 MTR_7g014610 23.714 447 271 18 2 393 8 439 7.69e-16 80.1
MS.gene004218.t1 MTR_4g013050 25.124 402 219 15 24 391 22 375 1.23e-15 79.0
MS.gene004218.t1 MTR_5g026320 22.609 345 231 14 58 384 74 400 1.29e-15 79.0
MS.gene004218.t1 MTR_7g014620 23.454 388 264 11 22 387 12 388 1.90e-15 78.6
MS.gene004218.t1 MTR_4g022720 26.420 352 213 14 61 386 58 389 1.36e-14 75.9
MS.gene004218.t1 MTR_3g101970 24.917 301 184 10 61 346 72 345 2.03e-14 75.5
MS.gene004218.t1 MTR_0042s0190 30.075 133 91 2 253 384 27 158 5.77e-14 71.6
MS.gene004218.t1 MTR_4g094842 24.088 274 183 9 131 392 146 406 1.33e-13 72.8
MS.gene004218.t1 MTR_4g022670 23.650 389 254 15 30 386 18 395 1.71e-13 72.4
MS.gene004218.t1 MTR_5g090880 22.841 359 236 14 58 385 67 415 2.78e-13 72.0
MS.gene004218.t1 MTR_4g094838 22.039 363 239 11 48 392 54 390 3.58e-13 71.6
MS.gene004218.t1 MTR_3g450710 22.969 357 229 13 58 381 65 408 4.42e-13 71.2
MS.gene004218.t1 MTR_8g041770 23.513 353 229 14 61 392 67 399 1.61e-12 69.3
MS.gene004218.t1 MTR_8g467580 20.891 359 236 12 56 390 58 392 3.62e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004218.t1 AT1G28680 60.948 443 163 6 2 437 4 443 0.0 566
MS.gene004218.t1 AT1G28680 59.392 362 140 5 2 359 4 362 1.53e-157 451
MS.gene004218.t1 AT5G07080 32.962 449 266 14 2 432 12 443 1.49e-64 214
MS.gene004218.t1 AT3G47170 32.759 464 260 14 6 434 16 462 5.47e-61 206
MS.gene004218.t1 AT2G25150 30.889 450 283 12 1 434 12 449 1.89e-58 199
MS.gene004218.t1 AT2G23510 31.403 449 266 17 9 435 20 448 2.91e-58 198
MS.gene004218.t1 AT5G41040 30.000 420 261 14 25 432 38 436 7.30e-49 173
MS.gene004218.t1 AT5G41040 30.000 420 261 14 25 432 54 452 1.00e-48 173
MS.gene004218.t1 AT3G62160 28.493 365 244 9 31 389 25 378 4.29e-45 162
MS.gene004218.t1 AT1G27620 30.162 431 263 14 5 424 12 415 1.53e-44 161
MS.gene004218.t1 AT3G48720 27.725 422 268 12 29 436 32 430 1.66e-43 158
MS.gene004218.t1 AT5G63560 28.924 446 272 16 5 436 12 426 5.96e-42 154
MS.gene004218.t1 AT3G03480 30.679 427 262 18 24 435 39 446 1.17e-40 151
MS.gene004218.t1 AT5G17540 32.715 431 249 17 24 435 29 437 1.78e-40 150
MS.gene004218.t1 AT2G40230 29.556 450 248 18 1 420 4 414 8.14e-40 148
MS.gene004218.t1 AT1G03390 28.188 447 291 17 2 430 17 451 6.98e-39 146
MS.gene004218.t1 AT5G48930 29.032 403 260 16 2 390 3 393 2.36e-32 128
MS.gene004218.t1 AT1G65450 27.885 416 245 17 2 389 18 406 7.39e-31 124
MS.gene004218.t1 AT2G19070 28.814 354 214 13 57 381 57 401 5.00e-28 115
MS.gene004218.t1 AT1G24430 26.866 402 237 16 58 444 62 421 1.28e-26 111
MS.gene004218.t1 AT4G31910 25.061 407 272 13 2 382 9 408 4.38e-26 110
MS.gene004218.t1 AT1G32910 25.434 346 228 12 58 384 65 399 1.21e-23 103
MS.gene004218.t1 AT1G78990 24.044 366 250 11 33 384 45 396 8.51e-19 89.0
MS.gene004218.t1 AT1G31490 24.852 338 226 12 58 383 62 383 1.30e-18 88.2
MS.gene004218.t1 AT5G16410 22.093 344 236 11 58 384 91 419 2.36e-18 87.8
MS.gene004218.t1 AT5G57840 26.119 402 260 16 2 381 3 389 2.55e-18 87.4
MS.gene004218.t1 AT3G26040 25.185 405 242 19 57 437 58 425 4.44e-18 86.7
MS.gene004218.t1 AT1G65450 25.391 256 160 8 151 389 1 242 7.16e-18 84.0
MS.gene004218.t1 AT3G29670 23.590 390 264 12 21 386 25 404 9.20e-18 85.9
MS.gene004218.t1 AT2G39980 25.849 383 211 18 61 386 65 431 7.59e-16 80.1
MS.gene004218.t1 AT3G29635 24.855 346 228 12 61 383 70 406 7.65e-16 79.7
MS.gene004218.t1 AT5G39090 23.844 411 280 13 10 397 13 413 1.86e-15 78.6
MS.gene004218.t1 AT5G07860 24.709 344 229 12 58 386 72 400 3.02e-13 72.0
MS.gene004218.t1 AT5G61160 25.279 269 168 9 139 384 145 403 9.82e-13 70.1
MS.gene004218.t1 AT5G01210 24.390 287 179 9 139 392 145 426 1.16e-11 67.0
MS.gene004218.t1 AT3G29680 23.040 421 280 14 1 392 5 410 1.16e-11 67.0
MS.gene004218.t1 AT5G07870 24.342 304 209 10 58 346 72 369 1.50e-11 66.6
MS.gene004218.t1 AT3G50270 21.467 368 249 11 44 386 48 400 9.68e-11 63.9

Find 132 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTCATTCTACTGTGGATTT+TGG 0.150082 2.4:+69619852 MS.gene004218:CDS
TTTAATCCTTCTTCGGGTTC+TGG 0.181606 2.4:-69618885 None:intergenic
AAAGAATGGGTTTAAGGTTT+TGG 0.229892 2.4:+69619974 MS.gene004218:CDS
GTACCAACTGTTCAACAAAA+TGG 0.245600 2.4:-69618857 None:intergenic
CATCACTTCCTGCTGGATAT+TGG 0.249545 2.4:+69619619 MS.gene004218:CDS
ATCACTTCCTGCTGGATATT+GGG 0.276801 2.4:+69619620 MS.gene004218:CDS
TCAGCACTAGCCGTTGAATA+AGG 0.318065 2.4:-69619948 None:intergenic
GTCATGGTGGTGGGTGGTTG+TGG 0.324690 2.4:-69618643 None:intergenic
GTCGTCGTCGAGGTAGTTTA+TGG 0.336350 2.4:-69618826 None:intergenic
TGGATGGTTTAATCCTTCTT+CGG 0.336618 2.4:-69618892 None:intergenic
AAGCTTTAGGTGCTTACATT+TGG 0.349704 2.4:+69619279 MS.gene004218:CDS
AGCTCTGCTGTTTCCCAAAT+GGG 0.350162 2.4:-69619699 None:intergenic
CCAAGTGGCAAAACAGTAAC+TGG 0.351192 2.4:-69619885 None:intergenic
GGGTTGTTCTACCAAATCTT+TGG 0.359504 2.4:-69619679 None:intergenic
TTAATCCTTCTTCGGGTTCT+GGG 0.359889 2.4:-69618884 None:intergenic
TAGCTCTGCTGTTTCCCAAA+TGG 0.360141 2.4:-69619700 None:intergenic
CCTTCTTCGGGTTCTGGGTC+GGG 0.362668 2.4:-69618879 None:intergenic
GGATGGTTTAATCCTTCTTC+GGG 0.367837 2.4:-69618891 None:intergenic
ATTTGGTAGAACAACCCATT+TGG 0.371805 2.4:+69619685 MS.gene004218:CDS
CGGTGAAGGGGTCATGGTGG+TGG 0.376705 2.4:-69618653 None:intergenic
TTTGGTAGAACAACCCATTT+GGG 0.379362 2.4:+69619686 MS.gene004218:CDS
ATGGGATCACAGCAGGGAAA+TGG 0.379534 2.4:+69619799 MS.gene004218:CDS
TCAACTGAGTGCCAAAGATT+TGG 0.389038 2.4:+69619668 MS.gene004218:CDS
CCTGCTGGATATTGGGGAAA+TGG 0.402647 2.4:+69619627 MS.gene004218:CDS
GGATGTGCCACGAGTGGATT+CGG 0.409644 2.4:+69619097 MS.gene004218:CDS
GCCACGAGTGGATTCGGCTT+TGG 0.411240 2.4:+69619103 MS.gene004218:CDS
GAAGATATGCAAATGTTTGC+TGG 0.417575 2.4:+69620032 MS.gene004218:CDS
TCCTTCTTCGGGTTCTGGGT+CGG 0.418612 2.4:-69618880 None:intergenic
GAGGGAGGGTGTGGTCTTCA+AGG 0.424585 2.4:-69618557 None:intergenic
CGAGGCGGTGGTTGCGGTAG+CGG 0.425918 2.4:-69618734 None:intergenic
CACTTGGTAGAAACTTGCTT+GGG 0.426890 2.4:+69619901 MS.gene004218:CDS
GGAGGAGGAGATGACGGTGA+AGG 0.426979 2.4:-69618667 None:intergenic
CAACATTTGCATTATGCTGA+TGG 0.427236 2.4:+69619780 MS.gene004218:CDS
CTTTAGGTGCTTACATTTGG+AGG 0.427354 2.4:+69619282 MS.gene004218:CDS
GGGTGAGTGGTTTCACTGAT+TGG 0.429689 2.4:+69619820 MS.gene004218:CDS
CCATTCACTTTGTGATGGAA+TGG 0.439377 2.4:+69618974 MS.gene004218:CDS
GGGTGTGGTCTTCAAGGAAG+GGG 0.448346 2.4:-69618551 None:intergenic
TCATGTGAAGGATGAGTGTT+TGG 0.451219 2.4:+69619202 MS.gene004218:CDS
GGTGGGAGAGAGGGAGGGTG+TGG 0.451596 2.4:-69618566 None:intergenic
AGCAGAAGAGTTCGAGGCGG+TGG 0.454116 2.4:-69618746 None:intergenic
AAGTGCGGTGGGTTCGCTCT+CGG 0.454992 2.4:+69618939 MS.gene004218:CDS
CGGTGTAAGCGCGGAGGTAG+CGG 0.455578 2.4:-69618620 None:intergenic
GAGAGAAGTTGTTGGGTCCA+AGG 0.457499 2.4:+69619075 MS.gene004218:CDS
TACCAACTGTTCAACAAAAT+GGG 0.463293 2.4:-69618856 None:intergenic
TGAGAGGGAGGAGGAGATGA+CGG 0.464119 2.4:-69618673 None:intergenic
TCCACTCGTGGCACATCCCT+TGG 0.464181 2.4:-69619092 None:intergenic
GAAGGGGTCATGGTGGTGGG+TGG 0.467880 2.4:-69618649 None:intergenic
TTTCACTGATTGGAGACACT+TGG 0.470257 2.4:+69619830 MS.gene004218:CDS
TGTCGAGGTGGGAGAGAGGG+AGG 0.470311 2.4:-69618572 None:intergenic
TTTCAACGCGATGGCTGAGT+TGG 0.472759 2.4:+69619010 MS.gene004218:CDS
TGTTCAACAAAATGGGAAGA+TGG 0.476068 2.4:-69618849 None:intergenic
TGCATATCTTCTCTAAAAGC+AGG 0.479818 2.4:-69620020 None:intergenic
GGTGTGGTCTTCAAGGAAGG+GGG 0.480902 2.4:-69618550 None:intergenic
TATGCTGATGGGATCACAGC+AGG 0.486804 2.4:+69619792 MS.gene004218:CDS
TGGGATCACAGCAGGGAAAT+GGG 0.489521 2.4:+69619800 MS.gene004218:CDS
GGTGAAGGGGTCATGGTGGT+GGG 0.489847 2.4:-69618652 None:intergenic
AGAGAAGTTGTTGGGTCCAA+GGG 0.492251 2.4:+69619076 MS.gene004218:CDS
AATCTTTGTTTGATCAATGT+GGG 0.495194 2.4:+69619237 MS.gene004218:CDS
CCACTTGGTAGAAACTTGCT+TGG 0.502609 2.4:+69619900 MS.gene004218:CDS
GAGGAGGAGATGACGGTGAA+GGG 0.508710 2.4:-69618666 None:intergenic
GTAAAGCCATCACTTCCTGC+TGG 0.511270 2.4:+69619612 MS.gene004218:CDS
CGGTGTCGAGGTGGGAGAGA+GGG 0.511571 2.4:-69618575 None:intergenic
GAGGGTGTGGTCTTCAAGGA+AGG 0.515106 2.4:-69618553 None:intergenic
TGGGAGAGAGAGAAGTTGTT+GGG 0.516067 2.4:+69619068 MS.gene004218:CDS
GCACTCAGTTGAACATACAT+TGG 0.517518 2.4:-69619657 None:intergenic
AGATGACGGTGAAGGGGTCA+TGG 0.517676 2.4:-69618659 None:intergenic
AGAGTTCGAGGCGGTGGTTG+CGG 0.518414 2.4:-69618740 None:intergenic
GGCTGAGTTGGCTCGTGGCA+AGG 0.522476 2.4:+69619022 MS.gene004218:CDS
ATTCACCATTCACTTTGTGA+TGG 0.524293 2.4:+69618969 MS.gene004218:CDS
TATCGTCAAATGCGAGACTC+GGG 0.525656 2.4:-69620071 None:intergenic
AACATTTGCATTATGCTGAT+GGG 0.525725 2.4:+69619781 MS.gene004218:CDS
CCATTCCATCACAAAGTGAA+TGG 0.529607 2.4:-69618974 None:intergenic
GAACCCACCGCACTTGAAAA+CGG 0.529737 2.4:-69618931 None:intergenic
AAATCTTTGTTTGATCAATG+TGG 0.533974 2.4:+69619236 MS.gene004218:CDS
TTCACTGATTGGAGACACTT+GGG 0.534221 2.4:+69619831 MS.gene004218:CDS
GTGGGAGAGAGAGAAGTTGT+TGG 0.536284 2.4:+69619067 MS.gene004218:CDS
CATTCACTTTGTGATGGAAT+GGG 0.536489 2.4:+69618975 MS.gene004218:CDS
TTGGTGTATGAAGATGGTGA+TGG 0.536515 2.4:+69619158 MS.gene004218:CDS
CAGGGTAAAGGCCTCAAAAG+TGG 0.540199 2.4:+69619539 MS.gene004218:intron
TCACTTCCTGCTGGATATTG+GGG 0.541667 2.4:+69619621 MS.gene004218:CDS
ATGGTGGTGGGTGGTTGTGG+CGG 0.548358 2.4:-69618640 None:intergenic
CAATATCCAGCAGGAAGTGA+TGG 0.550224 2.4:-69619618 None:intergenic
ATATCGTCAAATGCGAGACT+CGG 0.559625 2.4:-69620072 None:intergenic
GTTCAACAAAATGGGAAGAT+GGG 0.559847 2.4:-69618848 None:intergenic
GTTGCGATCGGTGTCGAGGT+GGG 0.561871 2.4:-69618583 None:intergenic
TAGCGGAGTGTAGCGGCGAG+TGG 0.570434 2.4:-69618717 None:intergenic
GCGGCGAGTGGGTAGTAATG+AGG 0.575357 2.4:-69618705 None:intergenic
GTCGAGGTGGGAGAGAGGGA+GGG 0.576095 2.4:-69618571 None:intergenic
CCATTTCCCCAATATCCAGC+AGG 0.578174 2.4:-69619627 None:intergenic
TGGTTGAGCAGAAGAGTTCG+AGG 0.582093 2.4:-69618752 None:intergenic
GGTTGCGATCGGTGTCGAGG+TGG 0.583677 2.4:-69618584 None:intergenic
TCGGTGTCGAGGTGGGAGAG+AGG 0.583923 2.4:-69618576 None:intergenic
CCCGACCCAGAACCCGAAGA+AGG 0.583982 2.4:+69618879 MS.gene004218:CDS
GGGAAGATGGGTCGTCGTCG+AGG 0.586553 2.4:-69618836 None:intergenic
GGTTGTGTGGAGGTTGCGAT+CGG 0.587060 2.4:-69618595 None:intergenic
TCTACGGTGGCGTGGATGAG+AGG 0.587378 2.4:-69618789 None:intergenic
AGGAGGAGATGACGGTGAAG+GGG 0.588827 2.4:-69618665 None:intergenic
AACTTCTCTCTCTCCCACAC+TGG 0.589735 2.4:-69619062 None:intergenic
TCCAAGGGATGTGCCACGAG+TGG 0.592833 2.4:+69619091 MS.gene004218:CDS
ACGGTGACTTGAAGCATGCA+TGG 0.593976 2.4:-69618912 None:intergenic
CGGCGAGTGGGTAGTAATGA+GGG 0.594783 2.4:-69618704 None:intergenic
AGGGTGTGGTCTTCAAGGAA+GGG 0.594785 2.4:-69618552 None:intergenic
GAGAGGAACACTGTCTTGGT+TGG 0.595436 2.4:-69618772 None:intergenic
TGGTTGTGGCGGTGTAAGCG+CGG 0.598288 2.4:-69618629 None:intergenic
TAATTGCTACTACAGGGTAA+AGG 0.598627 2.4:+69619527 MS.gene004218:intron
TCACTTTGTGATGGAATGGG+TGG 0.602513 2.4:+69618978 MS.gene004218:CDS
TGACTTGAAGCATGCATGGA+TGG 0.604597 2.4:-69618908 None:intergenic
AGCGGAGTGTAGCGGCGAGT+GGG 0.609901 2.4:-69618716 None:intergenic
AAAAGTGGAGGATAATGAGA+AGG 0.618094 2.4:+69619554 MS.gene004218:CDS
GGATGAGAGGAACACTGTCT+TGG 0.620333 2.4:-69618776 None:intergenic
ATGCTGATGGGATCACAGCA+GGG 0.624518 2.4:+69619793 MS.gene004218:CDS
TCGTGGCAAGGAACATATCA+CGG 0.627406 2.4:+69619034 MS.gene004218:CDS
CCAAGCAAGTTTCTACCAAG+TGG 0.630656 2.4:-69619900 None:intergenic
CACTTTGTGATGGAATGGGT+GGG 0.632981 2.4:+69618979 MS.gene004218:CDS
GTAAGCGCGGAGGTAGCGGA+TGG 0.635848 2.4:-69618616 None:intergenic
GTTGCGGTAGCGGAGTGTAG+CGG 0.639732 2.4:-69618724 None:intergenic
GAGTGATGTCTACGGTGGCG+TGG 0.639910 2.4:-69618797 None:intergenic
GCGATGGCTGAGTTGGCTCG+TGG 0.648947 2.4:+69619017 MS.gene004218:CDS
GGATTCGAGAGTGATGTCTA+CGG 0.649629 2.4:-69618805 None:intergenic
ACAGCAGGGAAATGGGTGAG+TGG 0.650251 2.4:+69619807 MS.gene004218:CDS
GGAGGTTGCGATCGGTGTCG+AGG 0.657190 2.4:-69618587 None:intergenic
GGTAAAGGCCTCAAAAGTGG+AGG 0.661293 2.4:+69619542 MS.gene004218:CDS
ACACTTGGGTCATTCTACTG+TGG 0.668381 2.4:+69619845 MS.gene004218:CDS
GGAGGTAGCGGATGGTTGTG+TGG 0.669159 2.4:-69618608 None:intergenic
ACCAAAGCCGAATCCACTCG+TGG 0.669647 2.4:-69619104 None:intergenic
TGACGGTGAAGGGGTCATGG+TGG 0.672375 2.4:-69618656 None:intergenic
TTGTGGCGGTGTAAGCGCGG+AGG 0.672851 2.4:-69618626 None:intergenic
ATATCACGGTGAAGCCAGTG+TGG 0.684655 2.4:+69619048 MS.gene004218:CDS
TATCACGGTGAAGCCAGTGT+GGG 0.691989 2.4:+69619049 MS.gene004218:CDS
GGTAGCGGATGGTTGTGTGG+AGG 0.692362 2.4:-69618605 None:intergenic
TTCGAGAGTGATGTCTACGG+TGG 0.701952 2.4:-69618802 None:intergenic
TTGAGCAGAAGAGTTCGAGG+CGG 0.760979 2.4:-69618749 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ATTCAACTGGTGATATATTT+AGG + chr2.4:69619446-69619465 MS.gene004218:intron 25.0%
! TAATCCAATAGAAACTTACT+TGG - chr2.4:69619309-69619328 None:intergenic 25.0%
! TTCAACTGGTGATATATTTA+GGG + chr2.4:69619447-69619466 MS.gene004218:intron 25.0%
!! AAATCTTTGTTTGATCAATG+TGG + chr2.4:69619236-69619255 MS.gene004218:CDS 25.0%
!! AATCTTTGTTTGATCAATGT+GGG + chr2.4:69619237-69619256 MS.gene004218:CDS 25.0%
!! TTCCATGATTTTTATTCAAC+TGG + chr2.4:69619433-69619452 MS.gene004218:intron 25.0%
!!! TTACTTTTTGCCTTATTCAA+CGG + chr2.4:69619938-69619957 MS.gene004218:CDS 25.0%
!!! TTATTATTGACTTGTGTCTT+AGG + chr2.4:69619375-69619394 MS.gene004218:intron 25.0%
AACATTTGCATTATGCTGAT+GGG + chr2.4:69619781-69619800 MS.gene004218:CDS 30.0%
CACCAGTTGAATAAAAATCA+TGG - chr2.4:69619438-69619457 None:intergenic 30.0%
GAATAAGGCAAAAAGTAACA+AGG - chr2.4:69619936-69619955 None:intergenic 30.0%
TACCAACTGTTCAACAAAAT+GGG - chr2.4:69618859-69618878 None:intergenic 30.0%
! TGAGAAAAAGAATGGGTTTA+AGG + chr2.4:69619968-69619987 MS.gene004218:CDS 30.0%
!! AAAGAATGGGTTTAAGGTTT+TGG + chr2.4:69619974-69619993 MS.gene004218:CDS 30.0%
!!! AGAGTTTTTGAGTTTGGATA+AGG + chr2.4:69619130-69619149 MS.gene004218:CDS 30.0%
!!! TTCACTACTTTTGAAGCTTT+AGG + chr2.4:69619266-69619285 MS.gene004218:CDS 30.0%
AAAAGTGGAGGATAATGAGA+AGG + chr2.4:69619554-69619573 MS.gene004218:CDS 35.0%
AGGTCCAAGTAAGTTTCTAT+TGG + chr2.4:69619302-69619321 MS.gene004218:intron 35.0%
ATTCACCATTCACTTTGTGA+TGG + chr2.4:69618969-69618988 MS.gene004218:CDS 35.0%
ATTTGGTAGAACAACCCATT+TGG + chr2.4:69619685-69619704 MS.gene004218:CDS 35.0%
CAACATTTGCATTATGCTGA+TGG + chr2.4:69619780-69619799 MS.gene004218:CDS 35.0%
GAAGATATGCAAATGTTTGC+TGG + chr2.4:69620032-69620051 MS.gene004218:CDS 35.0%
GTACCAACTGTTCAACAAAA+TGG - chr2.4:69618860-69618879 None:intergenic 35.0%
GTTCAACAAAATGGGAAGAT+GGG - chr2.4:69618851-69618870 None:intergenic 35.0%
TAATTGCTACTACAGGGTAA+AGG + chr2.4:69619527-69619546 MS.gene004218:intron 35.0%
TGGATGGTTTAATCCTTCTT+CGG - chr2.4:69618895-69618914 None:intergenic 35.0%
TGTTCAACAAAATGGGAAGA+TGG - chr2.4:69618852-69618871 None:intergenic 35.0%
TTTGGTAGAACAACCCATTT+GGG + chr2.4:69619686-69619705 MS.gene004218:CDS 35.0%
! CATTCACTTTGTGATGGAAT+GGG + chr2.4:69618975-69618994 MS.gene004218:CDS 35.0%
! CTAGTGCTGAGAAAAAGAAT+GGG + chr2.4:69619961-69619980 MS.gene004218:CDS 35.0%
! GAGTTTGGATAAGGAGTTTT+TGG + chr2.4:69619139-69619158 MS.gene004218:CDS 35.0%
! GTCATTCTACTGTGGATTTT+GGG + chr2.4:69619853-69619872 MS.gene004218:CDS 35.0%
! TGCATATCTTCTCTAAAAGC+AGG - chr2.4:69620023-69620042 None:intergenic 35.0%
! TTCCCATTTTGTTGAACAGT+TGG + chr2.4:69618854-69618873 MS.gene004218:CDS 35.0%
!! AAGCTTTAGGTGCTTACATT+TGG + chr2.4:69619279-69619298 MS.gene004218:CDS 35.0%
!!! GAGTTTTTGGTGTATGAAGA+TGG + chr2.4:69619152-69619171 MS.gene004218:CDS 35.0%
!!! GGTAAGAGAGTTTTTGAGTT+TGG + chr2.4:69619124-69619143 MS.gene004218:CDS 35.0%
ACCATGGTAATTGCTACTAC+AGG + chr2.4:69619520-69619539 MS.gene004218:intron 40.0%
ATCACTTCCTGCTGGATATT+GGG + chr2.4:69619620-69619639 MS.gene004218:CDS 40.0%
CATGATTTCTGCTCTAACCA+TGG + chr2.4:69619504-69619523 MS.gene004218:intron 40.0%
CCATGGTAATTGCTACTACA+GGG + chr2.4:69619521-69619540 MS.gene004218:intron 40.0%
CCATTCCATCACAAAGTGAA+TGG - chr2.4:69618977-69618996 None:intergenic 40.0%
CTTTAGGTGCTTACATTTGG+AGG + chr2.4:69619282-69619301 MS.gene004218:CDS 40.0%
GCACTCAGTTGAACATACAT+TGG - chr2.4:69619660-69619679 None:intergenic 40.0%
GGATGGTTTAATCCTTCTTC+GGG - chr2.4:69618894-69618913 None:intergenic 40.0%
GGGTTGTTCTACCAAATCTT+TGG - chr2.4:69619682-69619701 None:intergenic 40.0%
TCAACTGAGTGCCAAAGATT+TGG + chr2.4:69619668-69619687 MS.gene004218:CDS 40.0%
TCATGTGAAGGATGAGTGTT+TGG + chr2.4:69619202-69619221 MS.gene004218:CDS 40.0%
TTGGTGTATGAAGATGGTGA+TGG + chr2.4:69619158-69619177 MS.gene004218:CDS 40.0%
! ATTCTACTGTGGATTTTGGG+TGG + chr2.4:69619856-69619875 MS.gene004218:CDS 40.0%
! CACTTGGTAGAAACTTGCTT+GGG + chr2.4:69619901-69619920 MS.gene004218:CDS 40.0%
! CCATTCACTTTGTGATGGAA+TGG + chr2.4:69618974-69618993 MS.gene004218:CDS 40.0%
! GCTAGTGCTGAGAAAAAGAA+TGG + chr2.4:69619960-69619979 MS.gene004218:CDS 40.0%
! GGTCATTCTACTGTGGATTT+TGG + chr2.4:69619852-69619871 MS.gene004218:CDS 40.0%
! TTAATCCTTCTTCGGGTTCT+GGG - chr2.4:69618887-69618906 None:intergenic 40.0%
! TTCACTGATTGGAGACACTT+GGG + chr2.4:69619831-69619850 MS.gene004218:CDS 40.0%
! TTTAATCCTTCTTCGGGTTC+TGG - chr2.4:69618888-69618907 None:intergenic 40.0%
! TTTCACTGATTGGAGACACT+TGG + chr2.4:69619830-69619849 MS.gene004218:CDS 40.0%
!! AATGAGGGAGAGTTTTTGAG+AGG - chr2.4:69618692-69618711 None:intergenic 40.0%
!! ATGAGGGAGAGTTTTTGAGA+GGG - chr2.4:69618691-69618710 None:intergenic 40.0%
!! CTCATTATCCTCCACTTTTG+AGG - chr2.4:69619553-69619572 None:intergenic 40.0%
!! GGTTTTGGTGAATTTGAGTG+AGG + chr2.4:69619989-69620008 MS.gene004218:CDS 40.0%
!! TTCTACTGTGGATTTTGGGT+GGG + chr2.4:69619857-69619876 MS.gene004218:CDS 40.0%
!!! GACACTTTTTTTCAACGCGA+TGG + chr2.4:69619001-69619020 MS.gene004218:CDS 40.0%
!!! GAGAGAGTGTTTTCATGTGA+AGG + chr2.4:69619190-69619209 MS.gene004218:CDS 40.0%
ACACTTGGGTCATTCTACTG+TGG + chr2.4:69619845-69619864 MS.gene004218:CDS 45.0%
AGAGAAGTTGTTGGGTCCAA+GGG + chr2.4:69619076-69619095 MS.gene004218:CDS 45.0%
CAATATCCAGCAGGAAGTGA+TGG - chr2.4:69619621-69619640 None:intergenic 45.0%
CATCACTTCCTGCTGGATAT+TGG + chr2.4:69619619-69619638 MS.gene004218:CDS 45.0%
CCAAGCAAGTTTCTACCAAG+TGG - chr2.4:69619903-69619922 None:intergenic 45.0%
CCAAGTGGCAAAACAGTAAC+TGG - chr2.4:69619888-69619907 None:intergenic 45.0%
CCCTGTAGTAGCAATTACCA+TGG - chr2.4:69619524-69619543 None:intergenic 45.0%
GGATTCGAGAGTGATGTCTA+CGG - chr2.4:69618808-69618827 None:intergenic 45.0%
TCACTTCCTGCTGGATATTG+GGG + chr2.4:69619621-69619640 MS.gene004218:CDS 45.0%
TCAGCACTAGCCGTTGAATA+AGG - chr2.4:69619951-69619970 None:intergenic 45.0%
TCGTGGCAAGGAACATATCA+CGG + chr2.4:69619034-69619053 MS.gene004218:CDS 45.0%
TGACTTGAAGCATGCATGGA+TGG - chr2.4:69618911-69618930 None:intergenic 45.0%
TGGGAGAGAGAGAAGTTGTT+GGG + chr2.4:69619068-69619087 MS.gene004218:CDS 45.0%
! CACTTTGTGATGGAATGGGT+GGG + chr2.4:69618979-69618998 MS.gene004218:CDS 45.0%
! CCACTTGGTAGAAACTTGCT+TGG + chr2.4:69619900-69619919 MS.gene004218:CDS 45.0%
! CCAGTTACTGTTTTGCCACT+TGG + chr2.4:69619885-69619904 MS.gene004218:CDS 45.0%
! TCACTTTGTGATGGAATGGG+TGG + chr2.4:69618978-69618997 MS.gene004218:CDS 45.0%
!! AGCTCTGCTGTTTCCCAAAT+GGG - chr2.4:69619702-69619721 None:intergenic 45.0%
!! TAGCTCTGCTGTTTCCCAAA+TGG - chr2.4:69619703-69619722 None:intergenic 45.0%
!! TCTACTGTGGATTTTGGGTG+GGG + chr2.4:69619858-69619877 MS.gene004218:CDS 45.0%
!!! CAAGTCACCGTTTTCAAGTG+CGG + chr2.4:69618924-69618943 MS.gene004218:CDS 45.0%
AACTTCTCTCTCTCCCACAC+TGG - chr2.4:69619065-69619084 None:intergenic 50.0%
ACGGTGACTTGAAGCATGCA+TGG - chr2.4:69618915-69618934 None:intergenic 50.0%
AGGGTGTGGTCTTCAAGGAA+GGG - chr2.4:69618555-69618574 None:intergenic 50.0%
ATATCACGGTGAAGCCAGTG+TGG + chr2.4:69619048-69619067 MS.gene004218:CDS 50.0%
ATGCTGATGGGATCACAGCA+GGG + chr2.4:69619793-69619812 MS.gene004218:CDS 50.0%
ATGGGATCACAGCAGGGAAA+TGG + chr2.4:69619799-69619818 MS.gene004218:CDS 50.0%
CAGGGTAAAGGCCTCAAAAG+TGG + chr2.4:69619539-69619558 MS.gene004218:intron 50.0%
CCATTTCCCCAATATCCAGC+AGG - chr2.4:69619630-69619649 None:intergenic 50.0%
CCTGCTGGATATTGGGGAAA+TGG + chr2.4:69619627-69619646 MS.gene004218:CDS 50.0%
GAACCCACCGCACTTGAAAA+CGG - chr2.4:69618934-69618953 None:intergenic 50.0%
GAGAGAAGTTGTTGGGTCCA+AGG + chr2.4:69619075-69619094 MS.gene004218:CDS 50.0%
GAGAGGAACACTGTCTTGGT+TGG - chr2.4:69618775-69618794 None:intergenic 50.0%
GGATGAGAGGAACACTGTCT+TGG - chr2.4:69618779-69618798 None:intergenic 50.0%
GGGTGAGTGGTTTCACTGAT+TGG + chr2.4:69619820-69619839 MS.gene004218:CDS 50.0%
GGTAAAGGCCTCAAAAGTGG+AGG + chr2.4:69619542-69619561 MS.gene004218:CDS 50.0%
GTAAAGCCATCACTTCCTGC+TGG + chr2.4:69619612-69619631 MS.gene004218:CDS 50.0%
GTCGTCGTCGAGGTAGTTTA+TGG - chr2.4:69618829-69618848 None:intergenic 50.0%
GTGGGAGAGAGAGAAGTTGT+TGG + chr2.4:69619067-69619086 MS.gene004218:CDS 50.0%
TATCACGGTGAAGCCAGTGT+GGG + chr2.4:69619049-69619068 MS.gene004218:CDS 50.0%
TATGCTGATGGGATCACAGC+AGG + chr2.4:69619792-69619811 MS.gene004218:CDS 50.0%
TGGGATCACAGCAGGGAAAT+GGG + chr2.4:69619800-69619819 MS.gene004218:CDS 50.0%
TGGTTGAGCAGAAGAGTTCG+AGG - chr2.4:69618755-69618774 None:intergenic 50.0%
TTCGAGAGTGATGTCTACGG+TGG - chr2.4:69618805-69618824 None:intergenic 50.0%
TTGAGCAGAAGAGTTCGAGG+CGG - chr2.4:69618752-69618771 None:intergenic 50.0%
TTTCAACGCGATGGCTGAGT+TGG + chr2.4:69619010-69619029 MS.gene004218:CDS 50.0%
!! AGGGAGAGTTTTTGAGAGGG+AGG - chr2.4:69618688-69618707 None:intergenic 50.0%
!! GAGAGTTTTTGAGAGGGAGG+AGG - chr2.4:69618685-69618704 None:intergenic 50.0%
!!! TCACCGTTTTCAAGTGCGGT+GGG + chr2.4:69618928-69618947 MS.gene004218:CDS 50.0%
ACAGCAGGGAAATGGGTGAG+TGG + chr2.4:69619807-69619826 MS.gene004218:CDS 55.0%
ACCAAAGCCGAATCCACTCG+TGG - chr2.4:69619107-69619126 None:intergenic 55.0%
CGGCGAGTGGGTAGTAATGA+GGG - chr2.4:69618707-69618726 None:intergenic 55.0%
GGGTGTGGTCTTCAAGGAAG+GGG - chr2.4:69618554-69618573 None:intergenic 55.0%
GGTGTGGTCTTCAAGGAAGG+GGG - chr2.4:69618553-69618572 None:intergenic 55.0%
GGTTGTGTGGAGGTTGCGAT+CGG - chr2.4:69618598-69618617 None:intergenic 55.0%
TGAGAGGGAGGAGGAGATGA+CGG - chr2.4:69618676-69618695 None:intergenic 55.0%
! AGATGACGGTGAAGGGGTCA+TGG - chr2.4:69618662-69618681 None:intergenic 55.0%
! AGGAGGAGATGACGGTGAAG+GGG - chr2.4:69618668-69618687 None:intergenic 55.0%
! GAGGAGGAGATGACGGTGAA+GGG - chr2.4:69618669-69618688 None:intergenic 55.0%
! GAGGGTGTGGTCTTCAAGGA+AGG - chr2.4:69618556-69618575 None:intergenic 55.0%
! GGATGTGCCACGAGTGGATT+CGG + chr2.4:69619097-69619116 MS.gene004218:CDS 55.0%
! TCAAGGAAGGGGGTGTGTGA+AGG - chr2.4:69618543-69618562 None:intergenic 55.0%
!! ACTGTGGATTTTGGGTGGGG+AGG + chr2.4:69619861-69619880 MS.gene004218:CDS 55.0%
!! TCCTTCTTCGGGTTCTGGGT+CGG - chr2.4:69618883-69618902 None:intergenic 55.0%
!!! GTCACCGTTTTCAAGTGCGG+TGG + chr2.4:69618927-69618946 MS.gene004218:CDS 55.0%
AGAGTTCGAGGCGGTGGTTG+CGG - chr2.4:69618743-69618762 None:intergenic 60.0%
AGCAGAAGAGTTCGAGGCGG+TGG - chr2.4:69618749-69618768 None:intergenic 60.0%
GAGTGATGTCTACGGTGGCG+TGG - chr2.4:69618800-69618819 None:intergenic 60.0%
GCGGCGAGTGGGTAGTAATG+AGG - chr2.4:69618708-69618727 None:intergenic 60.0%
GGTGAAGGGGTCATGGTGGT+GGG - chr2.4:69618655-69618674 None:intergenic 60.0%
TCCAAGGGATGTGCCACGAG+TGG + chr2.4:69619091-69619110 MS.gene004218:CDS 60.0%
TCCACTCGTGGCACATCCCT+TGG - chr2.4:69619095-69619114 None:intergenic 60.0%
TCTACGGTGGCGTGGATGAG+AGG - chr2.4:69618792-69618811 None:intergenic 60.0%
TGACGGTGAAGGGGTCATGG+TGG - chr2.4:69618659-69618678 None:intergenic 60.0%
TGGTTGTGGCGGTGTAAGCG+CGG - chr2.4:69618632-69618651 None:intergenic 60.0%
! AAGTGCGGTGGGTTCGCTCT+CGG + chr2.4:69618939-69618958 MS.gene004218:CDS 60.0%
! GAGGGAGGGTGTGGTCTTCA+AGG - chr2.4:69618560-69618579 None:intergenic 60.0%
! GCCACGAGTGGATTCGGCTT+TGG + chr2.4:69619103-69619122 MS.gene004218:CDS 60.0%
! GGAGGAGGAGATGACGGTGA+AGG - chr2.4:69618670-69618689 None:intergenic 60.0%
!! ATGGTGGTGGGTGGTTGTGG+CGG - chr2.4:69618643-69618662 None:intergenic 60.0%
!! CCTTCTTCGGGTTCTGGGTC+GGG - chr2.4:69618882-69618901 None:intergenic 60.0%
!! GGAGGTAGCGGATGGTTGTG+TGG - chr2.4:69618611-69618630 None:intergenic 60.0%
!! GGTAGCGGATGGTTGTGTGG+AGG - chr2.4:69618608-69618627 None:intergenic 60.0%
!! GTCATGGTGGTGGGTGGTTG+TGG - chr2.4:69618646-69618665 None:intergenic 60.0%
!! GTTGCGATCGGTGTCGAGGT+GGG - chr2.4:69618586-69618605 None:intergenic 60.0%
!! GTTGCGGTAGCGGAGTGTAG+CGG - chr2.4:69618727-69618746 None:intergenic 60.0%
AGCGGAGTGTAGCGGCGAGT+GGG - chr2.4:69618719-69618738 None:intergenic 65.0%
CCCGACCCAGAACCCGAAGA+AGG + chr2.4:69618879-69618898 MS.gene004218:CDS 65.0%
CGGTGAAGGGGTCATGGTGG+TGG - chr2.4:69618656-69618675 None:intergenic 65.0%
CGGTGTAAGCGCGGAGGTAG+CGG - chr2.4:69618623-69618642 None:intergenic 65.0%
GGGAAGATGGGTCGTCGTCG+AGG - chr2.4:69618839-69618858 None:intergenic 65.0%
GTCGAGGTGGGAGAGAGGGA+GGG - chr2.4:69618574-69618593 None:intergenic 65.0%
TAGCGGAGTGTAGCGGCGAG+TGG - chr2.4:69618720-69618739 None:intergenic 65.0%
TGTCGAGGTGGGAGAGAGGG+AGG - chr2.4:69618575-69618594 None:intergenic 65.0%
TTGTGGCGGTGTAAGCGCGG+AGG - chr2.4:69618629-69618648 None:intergenic 65.0%
! CGGTGTCGAGGTGGGAGAGA+GGG - chr2.4:69618578-69618597 None:intergenic 65.0%
!! GAAGGGGTCATGGTGGTGGG+TGG - chr2.4:69618652-69618671 None:intergenic 65.0%
!! GCGATGGCTGAGTTGGCTCG+TGG + chr2.4:69619017-69619036 MS.gene004218:CDS 65.0%
!! GGAGGTTGCGATCGGTGTCG+AGG - chr2.4:69618590-69618609 None:intergenic 65.0%
!! GGCTGAGTTGGCTCGTGGCA+AGG + chr2.4:69619022-69619041 MS.gene004218:CDS 65.0%
!! GGTTGCGATCGGTGTCGAGG+TGG - chr2.4:69618587-69618606 None:intergenic 65.0%
!! GTAAGCGCGGAGGTAGCGGA+TGG - chr2.4:69618619-69618638 None:intergenic 65.0%
!! TCGGTGTCGAGGTGGGAGAG+AGG - chr2.4:69618579-69618598 None:intergenic 65.0%
CGAGGCGGTGGTTGCGGTAG+CGG - chr2.4:69618737-69618756 None:intergenic 70.0%
GGTGGGAGAGAGGGAGGGTG+TGG - chr2.4:69618569-69618588 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 69618507 69620088 69618507 ID=MS.gene004218
chr2.4 mRNA 69618507 69620088 69618507 ID=MS.gene004218.t1;Parent=MS.gene004218
chr2.4 exon 69618507 69619309 69618507 ID=MS.gene004218.t1.exon1;Parent=MS.gene004218.t1
chr2.4 CDS 69618507 69619309 69618507 ID=cds.MS.gene004218.t1;Parent=MS.gene004218.t1
chr2.4 exon 69619542 69620088 69619542 ID=MS.gene004218.t1.exon2;Parent=MS.gene004218.t1
chr2.4 CDS 69619542 69620088 69619542 ID=cds.MS.gene004218.t1;Parent=MS.gene004218.t1
Gene Sequence

>MS.gene004218

ATGTTGAAAATCAAAGAACAAACTCTCATTTTTCCTTCACACACCCCCTTCCTTGAAGACCACACCCTCCCTCTCTCCCACCTCGACACCGATCGCAACCTCCACACAACCATCCGCTACCTCCGCGCTTACACCGCCACAACCACCCACCACCATGACCCCTTCACCGTCATCTCCTCCTCCCTCTCAAAAACTCTCCCTCATTACTACCCACTCGCCGCTACACTCCGCTACCGCAACCACCGCCTCGAACTCTTCTGCTCAACCAACCAAGACAGTGTTCCTCTCATCCACGCCACCGTAGACATCACTCTCGAATCCATAAACTACCTCGACGACGACCCATCTTCCCATTTTGTTGAACAGTTGGTACCCGACCCAGAACCCGAAGAAGGATTAAACCATCCATGCATGCTTCAAGTCACCGTTTTCAAGTGCGGTGGGTTCGCTCTCGGTGCAGCAATTCACCATTCACTTTGTGATGGAATGGGTGGGACACTTTTTTTCAACGCGATGGCTGAGTTGGCTCGTGGCAAGGAACATATCACGGTGAAGCCAGTGTGGGAGAGAGAGAAGTTGTTGGGTCCAAGGGATGTGCCACGAGTGGATTCGGCTTTGGTAAGAGAGTTTTTGAGTTTGGATAAGGAGTTTTTGGTGTATGAAGATGGTGATGGTGTTGTTATGAGAGAGTGTTTTCATGTGAAGGATGAGTGTTTGGAAGAGTTTAAGAAATCTTTGTTTGATCAATGTGGGTTCAAGTTCACTACTTTTGAAGCTTTAGGTGCTTACATTTGGAGGTCCAAGTAAGTTTCTATTGGATTATTATTATTATTATTATACAATGTTAAAAGAGTTTGATTTTGATAAATTATTATTGACTTGTGTCTTAGGAAAATGCTAGACTTAGCGAAACTAATTTTGTTAAGTTCCATGATTTTTATTCAACTGGTGATATATTTAGGGACAATAACAATAGTATTTAAAATTTACATGATGACATGATTTCTGCTCTAACCATGGTAATTGCTACTACAGGGTAAAGGCCTCAAAAGTGGAGGATAATGAGAAGGTTAAGTTTGCATACTCAATCAACATACGAAGATTAGTAAAGCCATCACTTCCTGCTGGATATTGGGGAAATGGTTGTGTTCCAATGTATGTTCAACTGAGTGCCAAAGATTTGGTAGAACAACCCATTTGGGAAACAGCAGAGCTAATAAGAAAGAGTAAAACTAATGTCACTGATGAGTATGTTCGCTCTTTCATTGATTATCAACATTTGCATTATGCTGATGGGATCACAGCAGGGAAATGGGTGAGTGGTTTCACTGATTGGAGACACTTGGGTCATTCTACTGTGGATTTTGGGTGGGGAGGTCCAGTTACTGTTTTGCCACTTGGTAGAAACTTGCTTGGGAGTGTTGAGCCTTGTTACTTTTTGCCTTATTCAACGGCTAGTGCTGAGAAAAAGAATGGGTTTAAGGTTTTGGTGAATTTGAGTGAGGTAGCTTTGCCTGCTTTTAGAGAAGATATGCAAATGTTTGCTGGTAGTCAAGAGTTGTTACCCGAGTCTCGCATTTGA
Protein sequence

>MS.gene004218.t1

MLKIKEQTLIFPSHTPFLEDHTLPLSHLDTDRNLHTTIRYLRAYTATTTHHHDPFTVISSSLSKTLPHYYPLAATLRYRNHRLELFCSTNQDSVPLIHATVDITLESINYLDDDPSSHFVEQLVPDPEPEEGLNHPCMLQVTVFKCGGFALGAAIHHSLCDGMGGTLFFNAMAELARGKEHITVKPVWEREKLLGPRDVPRVDSALVREFLSLDKEFLVYEDGDGVVMRECFHVKDECLEEFKKSLFDQCGFKFTTFEALGAYIWRSKVKASKVEDNEKVKFAYSINIRRLVKPSLPAGYWGNGCVPMYVQLSAKDLVEQPIWETAELIRKSKTNVTDEYVRSFIDYQHLHYADGITAGKWVSGFTDWRHLGHSTVDFGWGGPVTVLPLGRNLLGSVEPCYFLPYSTASAEKKNGFKVLVNLSEVALPAFREDMQMFAGSQELLPESRI