AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44644

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44644.t1 MTR_7g014200 75.110 454 110 2 1 451 1 454 0.0 713
MS.gene44644.t1 MTR_7g014160 70.241 457 126 4 4 452 6 460 0.0 667
MS.gene44644.t1 MTR_7g014610 72.727 462 116 4 1 452 1 462 0.0 665
MS.gene44644.t1 MTR_7g014620 63.303 436 134 5 19 451 6 418 0.0 526
MS.gene44644.t1 MTR_7g013850 54.219 474 199 8 2 459 3 474 8.71e-166 478
MS.gene44644.t1 MTR_7g014630 68.531 286 81 3 5 281 7 292 1.76e-132 389
MS.gene44644.t1 MTR_7g014180 92.486 173 13 0 1 173 1 173 3.96e-109 322
MS.gene44644.t1 MTR_6g015320 41.280 453 240 11 7 452 8 441 4.76e-103 317
MS.gene44644.t1 MTR_7g014230 41.139 474 248 15 8 469 5 459 2.14e-99 308
MS.gene44644.t1 MTR_6g015315 40.402 448 250 9 8 452 6 439 7.99e-99 306
MS.gene44644.t1 MTR_6g015850 39.815 432 242 8 24 453 30 445 1.32e-96 300
MS.gene44644.t1 MTR_7g014330 40.351 456 244 13 8 451 3 442 5.67e-96 298
MS.gene44644.t1 MTR_6g015815 39.593 442 247 9 17 453 22 448 5.83e-96 299
MS.gene44644.t1 MTR_6g015830 41.084 443 230 13 21 453 27 448 5.86e-95 296
MS.gene44644.t1 MTR_7g014250 39.690 451 254 11 8 451 3 442 1.55e-92 290
MS.gene44644.t1 MTR_7g014670 69.822 169 50 1 284 452 79 246 2.00e-82 257
MS.gene44644.t1 MTR_3g028210 33.839 461 271 13 7 451 8 450 7.45e-71 234
MS.gene44644.t1 MTR_2g089765 31.624 468 282 13 7 451 16 468 6.77e-66 221
MS.gene44644.t1 MTR_7g015860 33.830 470 264 13 4 451 2 446 2.58e-65 219
MS.gene44644.t1 MTR_7g014360 37.306 386 198 12 76 451 21 372 1.69e-63 212
MS.gene44644.t1 MTR_2g089735 33.724 427 253 12 41 453 39 449 1.62e-59 204
MS.gene44644.t1 MTR_2g089670 31.544 447 263 12 24 451 41 463 9.19e-56 194
MS.gene44644.t1 MTR_3g087640 31.102 463 282 15 8 449 10 456 4.76e-54 189
MS.gene44644.t1 MTR_6g015310 35.519 366 176 11 81 443 25 333 1.16e-53 184
MS.gene44644.t1 MTR_2g089650 30.388 464 283 13 4 449 6 447 2.23e-53 187
MS.gene44644.t1 MTR_8g012750 30.426 470 288 13 7 451 3 458 1.20e-52 186
MS.gene44644.t1 MTR_2g089755 31.111 450 263 12 28 453 37 463 1.97e-52 185
MS.gene44644.t1 MTR_2g089665 28.062 449 191 14 7 439 2 334 1.85e-36 138
MS.gene44644.t1 MTR_7g014310 29.825 342 170 9 115 450 31 308 1.24e-34 132
MS.gene44644.t1 MTR_3g435300 31.408 277 168 6 8 272 4 270 7.80e-34 129
MS.gene44644.t1 MTR_5g081960 26.337 486 304 20 15 463 14 482 5.38e-23 102
MS.gene44644.t1 MTR_8g020970 84.211 57 9 0 454 510 827 883 2.18e-22 101
MS.gene44644.t1 MTR_6g045553 26.305 498 283 19 6 461 13 468 4.70e-22 99.4
MS.gene44644.t1 MTR_4g094838 27.451 459 239 18 19 447 19 413 2.17e-21 97.1
MS.gene44644.t1 MTR_7g086000 26.205 477 270 19 6 443 3 436 8.65e-21 95.5
MS.gene44644.t1 MTR_8g075610 24.675 385 239 16 44 417 30 374 1.54e-20 94.4
MS.gene44644.t1 MTR_8g079950 23.732 493 312 16 10 487 8 451 2.67e-20 94.0
MS.gene44644.t1 MTR_5g084870 24.229 454 281 18 10 453 8 408 8.08e-19 89.4
MS.gene44644.t1 MTR_8g079970 23.736 455 290 18 10 453 8 416 3.75e-17 84.3
MS.gene44644.t1 MTR_4g094828 24.342 456 272 18 20 447 21 431 1.36e-16 82.4
MS.gene44644.t1 MTR_4g094842 26.456 412 234 18 64 447 59 429 4.47e-16 80.9
MS.gene44644.t1 MTR_4g127650 23.666 431 278 15 41 451 43 442 8.28e-16 80.1
MS.gene44644.t1 MTR_8g079980 24.528 477 298 18 10 474 8 434 8.38e-16 80.1
MS.gene44644.t1 MTR_5g084850 24.678 466 278 20 10 464 8 411 9.56e-16 79.7
MS.gene44644.t1 MTR_8g467580 22.811 434 261 14 6 417 4 385 1.02e-15 79.7
MS.gene44644.t1 MTR_4g097090 24.424 434 257 18 23 416 4 406 2.12e-15 79.0
MS.gene44644.t1 MTR_4g022290 24.197 467 270 20 26 459 28 443 2.98e-15 78.6
MS.gene44644.t1 MTR_3g026310 23.400 453 283 14 20 447 16 429 3.47e-15 78.2
MS.gene44644.t1 MTR_3g102020 23.758 463 307 19 13 461 14 444 2.11e-14 75.9
MS.gene44644.t1 MTR_3g101960 22.650 468 301 17 13 459 14 441 2.16e-14 75.9
MS.gene44644.t1 MTR_2g007880 23.210 405 260 14 67 458 74 440 3.35e-14 75.1
MS.gene44644.t1 MTR_3g102010 23.261 460 308 18 13 459 15 442 6.48e-14 74.3
MS.gene44644.t1 MTR_3g098980 23.737 396 248 13 67 449 66 420 7.44e-14 73.9
MS.gene44644.t1 MTR_4g055170 24.802 379 232 17 50 414 59 398 1.48e-13 73.2
MS.gene44644.t1 MTR_0190s0020 23.776 429 252 17 64 462 60 443 1.76e-13 72.8
MS.gene44644.t1 MTR_8g467590 23.776 429 263 15 6 417 4 385 2.20e-13 72.8
MS.gene44644.t1 MTR_4g094832 28.152 341 183 17 127 447 113 411 2.60e-13 72.4
MS.gene44644.t1 MTR_8g096530 22.565 421 283 14 1 417 1 382 4.31e-13 71.6
MS.gene44644.t1 MTR_8g041770 22.877 424 273 14 25 440 27 404 4.54e-13 71.6
MS.gene44644.t1 MTR_2g015430 22.198 455 291 19 7 439 2 415 6.51e-13 71.2
MS.gene44644.t1 MTR_4g022825 23.604 394 267 11 64 447 52 421 8.02e-13 70.9
MS.gene44644.t1 MTR_3g049150 24.289 457 289 21 7 440 2 424 2.63e-12 69.3
MS.gene44644.t1 MTR_1g053315 22.938 388 249 19 44 417 58 409 4.05e-12 68.6
MS.gene44644.t1 MTR_4g022720 23.414 457 269 20 17 447 15 416 4.16e-12 68.6
MS.gene44644.t1 MTR_7g014205 32.558 129 63 4 304 427 5 114 4.86e-12 63.5
MS.gene44644.t1 MTR_4g022800 23.913 460 270 18 17 447 15 423 8.57e-12 67.8
MS.gene44644.t1 MTR_3g101930 23.542 463 275 23 28 458 30 445 5.19e-11 65.1
MS.gene44644.t1 MTR_7g014340 50.704 71 29 2 8 75 3 70 6.62e-11 59.7
MS.gene44644.t1 MTR_7g014220 55.556 54 21 1 24 77 14 64 7.21e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44644.t1 AT5G39050 37.983 466 262 12 5 457 8 459 3.58e-91 286
MS.gene44644.t1 AT3G29590 38.229 463 244 14 3 453 4 436 7.68e-90 283
MS.gene44644.t1 AT5G39080 36.129 465 263 13 5 453 3 449 3.44e-88 279
MS.gene44644.t1 AT3G29670 36.123 454 262 9 6 451 2 435 9.62e-88 277
MS.gene44644.t1 AT3G29635 37.442 430 249 9 26 451 27 440 3.46e-87 276
MS.gene44644.t1 AT5G39090 37.225 454 254 12 12 457 9 439 1.76e-86 274
MS.gene44644.t1 AT5G61160 33.259 451 278 10 7 451 3 436 4.21e-76 247
MS.gene44644.t1 AT3G29680 33.645 428 265 7 26 451 23 433 1.41e-72 238
MS.gene44644.t1 AT1G03940 32.203 472 276 15 1 451 2 450 2.36e-62 211
MS.gene44644.t1 AT1G03495 32.849 344 197 13 9 337 10 334 8.63e-42 153
MS.gene44644.t1 AT5G23940 25.219 456 291 20 12 449 10 433 2.86e-21 97.1
MS.gene44644.t1 AT1G72520 73.684 57 15 0 454 510 826 882 1.43e-19 93.2
MS.gene44644.t1 AT3G29720 33.143 175 100 5 104 271 26 190 1.93e-19 87.4
MS.gene44644.t1 AT1G17420 71.930 57 16 0 454 510 819 875 1.06e-18 90.5
MS.gene44644.t1 AT5G48930 24.301 465 299 21 7 458 3 427 3.69e-18 87.4
MS.gene44644.t1 AT1G28680 21.690 355 250 7 67 420 62 389 2.89e-16 81.6
MS.gene44644.t1 AT5G57840 24.301 465 289 23 7 451 3 424 5.80e-16 80.5
MS.gene44644.t1 AT5G67150 25.178 421 250 14 21 420 22 398 8.88e-16 80.1
MS.gene44644.t1 AT3G29690 28.777 139 91 3 314 451 33 164 1.06e-15 75.9
MS.gene44644.t1 AT5G42830 23.913 414 264 17 62 459 59 437 2.27e-15 79.0
MS.gene44644.t1 AT1G31490 22.350 434 283 15 22 443 23 414 3.34e-15 78.2
MS.gene44644.t1 AT5G41040 24.138 377 209 18 67 417 69 394 3.67e-15 78.2
MS.gene44644.t1 AT5G41040 24.138 377 209 18 67 417 85 410 3.79e-15 78.2
MS.gene44644.t1 AT5G07850 21.983 464 303 15 28 470 31 456 1.09e-14 76.6
MS.gene44644.t1 AT2G19070 21.510 437 278 16 7 416 4 402 2.98e-14 75.5
MS.gene44644.t1 AT3G50280 22.967 418 254 14 26 421 25 396 8.80e-13 70.9
MS.gene44644.t1 AT3G50300 25.876 371 232 14 64 421 56 396 1.39e-12 70.1
MS.gene44644.t1 AT5G47950 23.093 472 275 21 14 464 12 416 4.13e-12 68.6
MS.gene44644.t1 AT3G47170 24.000 375 224 16 30 384 45 378 4.93e-12 68.6
MS.gene44644.t1 AT2G25150 22.973 370 235 14 67 420 67 402 2.11e-11 66.6

Find 85 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATAGCAAATAACTATTT+TGG 0.160771 7.3:-83392115 MS.gene44644:CDS
GAATTTGTTGATTCCAAATA+TGG 0.206007 7.3:+83392694 None:intergenic
TATGATTTCACTGCTGAAAT+TGG 0.227650 7.3:-83389159 MS.gene44644:CDS
GAAAGTGAAGATTTAAGATT+TGG 0.228104 7.3:+83392901 None:intergenic
TGCCTAGGATCCTAGATTAT+TGG 0.238785 7.3:-83389304 MS.gene44644:intron
CGAACACAGTCTTTGAGTTT+TGG 0.272734 7.3:+83392367 None:intergenic
CTTTAGCTGGTAACATCGTT+TGG 0.278608 7.3:-83392855 MS.gene44644:CDS
CAATAGAGTTGGTTTCTCTT+TGG 0.280325 7.3:+83392522 None:intergenic
CGAGACAGAGAAGCTTCTTT+TGG 0.285030 7.3:+83392727 None:intergenic
CCAAAATAGTTATTTGCTAT+TGG 0.300672 7.3:+83392115 None:intergenic
CAAAATTATCAAGAAAAGTT+TGG 0.303639 7.3:-83392178 MS.gene44644:CDS
ATGATTTCCCTGTTGAATAA+AGG 0.315079 7.3:+83392487 None:intergenic
TTGATCGAGTTATTTCCATT+TGG 0.330227 7.3:+83392457 None:intergenic
TGATCGAGTTATTTCCATTT+GGG 0.330700 7.3:+83392458 None:intergenic
ATTGGAAGCTACAAAATATA+TGG 0.331859 7.3:-83389286 MS.gene44644:CDS
CCGTCTGAAGAAGAGTATTT+AGG 0.332994 7.3:-83389237 MS.gene44644:CDS
AAGAAGTATCCAACTCAAAA+AGG 0.338145 7.3:-83392424 MS.gene44644:CDS
GAAGGGTCTGATTGTGAATC+TGG 0.343003 7.3:+83392946 None:intergenic
TAACCTCAATCGCGAAGATT+TGG 0.343284 7.3:-83392335 MS.gene44644:CDS
AGTTAGAACCTTTATTCAAC+AGG 0.363008 7.3:-83392495 MS.gene44644:CDS
ACTCATCATGCTGTTCTTGA+TGG 0.374958 7.3:-83392604 MS.gene44644:CDS
AGAGGCAACAACCTTCGATT+TGG 0.379058 7.3:-83389212 MS.gene44644:CDS
TTTAGCTGGTAACATCGTTT+GGG 0.399158 7.3:-83392854 MS.gene44644:CDS
AATAAAGATGATAAATGAAA+AGG 0.406139 7.3:-83391999 MS.gene44644:CDS
AATCATATTCATCAAAGCTT+GGG 0.406333 7.3:-83392572 MS.gene44644:CDS
TTGTGTTTGCTGTAGATTGT+AGG 0.411131 7.3:-83392153 MS.gene44644:CDS
TTTGTAGCTTCCAATAATCT+AGG 0.413221 7.3:+83389294 None:intergenic
CAATCATATTCATCAAAGCT+TGG 0.416022 7.3:-83392573 MS.gene44644:CDS
TGAGAGAAATTGAGGTTGTC+TGG 0.418830 7.3:+83393031 None:intergenic
GTTGCAGGGTCTAATAGATT+TGG 0.421014 7.3:-83391899 MS.gene44644:CDS
TAGAAGAAGATGTATTCTAT+TGG 0.422738 7.3:+83392976 None:intergenic
CAACACTTTCTTCCTTTAGC+TGG 0.427381 7.3:-83392868 MS.gene44644:CDS
ATTGTTTGAAAGAAGAATGA+AGG 0.444902 7.3:+83392928 None:intergenic
GGAAGTGGTGGAGTTGAAGT+TGG 0.449076 7.3:-83391779 MS.gene44644:CDS
ATAAAGATGATAAATGAAAA+GGG 0.449987 7.3:-83391998 MS.gene44644:CDS
TAGAGGTTTAGCCATTGGTT+TGG 0.455999 7.3:-83391816 MS.gene44644:CDS
GACACTATTTCCACCTTGGT+TGG 0.465401 7.3:+83391845 None:intergenic
AAATAGTTATTTGCTATTGG+TGG 0.472955 7.3:+83392118 None:intergenic
CATTCTTGTTTGACAAGAGA+AGG 0.474542 7.3:-83391938 MS.gene44644:CDS
GAAGTGGTGGAGTTGAAGTT+GGG 0.477101 7.3:-83391778 MS.gene44644:CDS
GTATGACATCGATCTTGGTT+GGG 0.485263 7.3:-83391873 MS.gene44644:CDS
AACTCATCACATCAGCAAAC+CGG 0.485376 7.3:+83388807 None:intergenic
GGTGTGTATGACATCGATCT+TGG 0.491228 7.3:-83391878 MS.gene44644:CDS
GAAATCATTCAAGACCCAAA+TGG 0.494774 7.3:-83392472 MS.gene44644:CDS
ATAGATAGAGGTTTAGCCAT+TGG 0.495902 7.3:-83391821 MS.gene44644:CDS
TATCCAAATCTTCGCGATTG+AGG 0.501317 7.3:+83392332 None:intergenic
GAAATAGTGTCGATAGATAG+AGG 0.506319 7.3:-83391833 MS.gene44644:CDS
TCTAACTCTTGCAATAGAGT+TGG 0.513527 7.3:+83392511 None:intergenic
GGTTTGGCAGATAGCAAAGA+TGG 0.516069 7.3:-83391800 MS.gene44644:CDS
GAGGTTGTCTGGCTTGATGA+TGG 0.516832 7.3:+83393042 None:intergenic
TTCAGACGGATGAGTCGAAT+GGG 0.519404 7.3:+83389251 None:intergenic
CAAACGATGTTACCAGCTAA+AGG 0.520252 7.3:+83392856 None:intergenic
TTTGGATAAGATAAAGCAAA+GGG 0.523768 7.3:-83392317 MS.gene44644:CDS
ATACAATACACATCAAATGA+TGG 0.528754 7.3:-83392808 MS.gene44644:CDS
AGAAGATGTATTCTATTGGA+TGG 0.532365 7.3:+83392980 None:intergenic
TGTATGACATCGATCTTGGT+TGG 0.532900 7.3:-83391874 MS.gene44644:CDS
CAGCTAAAGGAAGAAAGTGT+TGG 0.536065 7.3:+83392869 None:intergenic
TATCGACACTATTTCCACCT+TGG 0.537400 7.3:+83391841 None:intergenic
CAACAACCTTCGATTTGGAC+TGG 0.551863 7.3:-83389207 MS.gene44644:CDS
ATCTGACTCTGCAATGAGCA+AGG 0.563250 7.3:+83392780 None:intergenic
CTTCAGACGGATGAGTCGAA+TGG 0.566170 7.3:+83389250 None:intergenic
AGCAAAGGGTGTTATCAACA+TGG 0.567130 7.3:-83392303 MS.gene44644:CDS
GCAGATAGCAAAGATGGAAG+TGG 0.586790 7.3:-83391794 MS.gene44644:CDS
CCTAAATACTCTTCTTCAGA+CGG 0.587806 7.3:+83389237 None:intergenic
TATGACATCGATCTTGGTTG+GGG 0.590390 7.3:-83391872 MS.gene44644:CDS
CTAAAGGAAGAAAGTGTTGG+AGG 0.593641 7.3:+83392872 None:intergenic
TTTGCTATCTGCCAAACCAA+TGG 0.594252 7.3:+83391805 None:intergenic
TTGTTTGAAAGAAGAATGAA+GGG 0.600190 7.3:+83392929 None:intergenic
AAGAAGAGTATTTAGGTGAG+AGG 0.600500 7.3:-83389230 MS.gene44644:CDS
ATGATGAGTGCTTATTCCAA+TGG 0.600520 7.3:+83392618 None:intergenic
CTAACGAATAAGCGCAAGCA+AGG 0.603083 7.3:+83392230 None:intergenic
GTCTGATTGTGAATCTGGGA+GGG 0.610547 7.3:+83392951 None:intergenic
GCAAAGGGTGTTATCAACAT+GGG 0.614173 7.3:-83392302 MS.gene44644:CDS
ATTTGGATAAGATAAAGCAA+AGG 0.614591 7.3:-83392318 MS.gene44644:CDS
AAGGGTCTGATTGTGAATCT+GGG 0.619801 7.3:+83392947 None:intergenic
GATAGCAAAGATGGAAGTGG+TGG 0.619907 7.3:-83391791 MS.gene44644:CDS
GCATCACCAGTCCAAATCGA+AGG 0.626975 7.3:+83389201 None:intergenic
TTGCTGTAGATTGTAGGACA+AGG 0.630737 7.3:-83392147 MS.gene44644:CDS
GTTAGAACCTTTATTCAACA+GGG 0.632568 7.3:-83392494 MS.gene44644:CDS
TAAAGGAAGAAAGTGTTGGA+GGG 0.658167 7.3:+83392873 None:intergenic
GGTCTGATTGTGAATCTGGG+AGG 0.678372 7.3:+83392950 None:intergenic
GTTGTCTGGCTTGATGATGG+AGG 0.679677 7.3:+83393045 None:intergenic
TGAAATTGGAAAGTTTGCGA+AGG 0.686849 7.3:-83389145 MS.gene44644:intron
TGGTTGGGGAAAACCAACCA+AGG 0.692930 7.3:-83391858 MS.gene44644:CDS
TTGGGGAAAACCAACCAAGG+TGG 0.693644 7.3:-83391855 MS.gene44644:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATATATAGTTATTTGT+TGG - chr7.3:83390258-83390277 MS.gene44644:intron 10.0%
!!! ATGAATTGATTTTATAAATT+TGG - chr7.3:83390297-83390316 MS.gene44644:intron 10.0%
!!! TATATTTTATTTGAATTACA+TGG + chr7.3:83390247-83390266 None:intergenic 10.0%
!! AAAAAACTTAATTAATGCAT+GGG + chr7.3:83390633-83390652 None:intergenic 15.0%
!! AAATTGAGTTATATGTAAAA+TGG + chr7.3:83391946-83391965 None:intergenic 15.0%
!! AATAAAGATGATAAATGAAA+AGG - chr7.3:83389912-83389931 MS.gene44644:intron 15.0%
!! AATAAGTATTTCAAATTCAA+TGG + chr7.3:83390560-83390579 None:intergenic 15.0%
!! ATAAAGATGATAAATGAAAA+GGG - chr7.3:83389913-83389932 MS.gene44644:intron 15.0%
!! ATCCAATATTCATTAAAATA+TGG + chr7.3:83391120-83391139 None:intergenic 15.0%
!! TAAAAAACTTAATTAATGCA+TGG + chr7.3:83390634-83390653 None:intergenic 15.0%
!!! AACTCTAAAGTTTAAAATAA+AGG - chr7.3:83391655-83391674 MS.gene44644:intron 15.0%
!!! TCTTCTTTTATAAAATCTAA+CGG + chr7.3:83389856-83389875 None:intergenic 15.0%
!!! TGCAAAATATAAAAAGTATA+TGG + chr7.3:83390604-83390623 None:intergenic 15.0%
!!! TTAGATTTTATAAAAGAAGA+TGG - chr7.3:83389856-83389875 MS.gene44644:intron 15.0%
!!! TTTGTTTTGTCTTTTAATTT+GGG - chr7.3:83391245-83391264 MS.gene44644:intron 15.0%
!! AAAATGAATAAACCAACTAA+TGG + chr7.3:83391290-83391309 None:intergenic 20.0%
!! AAATGAATAAACCAACTAAT+GGG + chr7.3:83391289-83391308 None:intergenic 20.0%
!! ACAATATTCAGTACAAAAAA+TGG + chr7.3:83391558-83391577 None:intergenic 20.0%
!! ATAAATGTAAAAATCATGTC+TGG + chr7.3:83391878-83391897 None:intergenic 20.0%
!! CAAAATTATCAAGAAAAGTT+TGG - chr7.3:83389733-83389752 MS.gene44644:intron 20.0%
!! CATTCAAAATTAAGATTGTT+AGG + chr7.3:83392431-83392450 None:intergenic 20.0%
!! GATATAAAACTTGCATATTT+AGG + chr7.3:83392558-83392577 None:intergenic 20.0%
!! TATGTAAAATGGCTTATATT+TGG + chr7.3:83391935-83391954 None:intergenic 20.0%
!! TGAATAAAATAATATGCAGA+AGG + chr7.3:83391215-83391234 None:intergenic 20.0%
!!! AAATTTTTCTGTTTGATTCA+GGG - chr7.3:83391082-83391101 MS.gene44644:intron 20.0%
!!! ACTTTAGACATATTTTTATG+TGG + chr7.3:83392907-83392926 None:intergenic 20.0%
!!! CGTTTTAATTGCTATTTAAA+TGG - chr7.3:83391056-83391075 MS.gene44644:intron 20.0%
!!! CTAACAATCTTAATTTTGAA+TGG - chr7.3:83392429-83392448 MS.gene44644:CDS 20.0%
!!! CTCCATATTTTAATGAATAT+TGG - chr7.3:83391115-83391134 MS.gene44644:intron 20.0%
!!! CTTATAGTTTTTGTATTTTG+TGG - chr7.3:83391469-83391488 MS.gene44644:intron 20.0%
!!! CTTGATAATTTTGAACTTTA+TGG + chr7.3:83389726-83389745 None:intergenic 20.0%
!!! CTTTGTTTTGTCTTTTAATT+TGG - chr7.3:83391244-83391263 MS.gene44644:intron 20.0%
!!! TAACTCTATCATTGATTATT+AGG + chr7.3:83392346-83392365 None:intergenic 20.0%
!!! TATTTTAAACTTTAGAGTTG+AGG + chr7.3:83391654-83391673 None:intergenic 20.0%
!!! TTGATGTGTATTGTATTTTT+GGG + chr7.3:83389099-83389118 None:intergenic 20.0%
!!! TTTGATGTGTATTGTATTTT+TGG + chr7.3:83389100-83389119 None:intergenic 20.0%
!!! TTTTTGGAAAAAAGGTTATT+TGG + chr7.3:83389264-83389283 None:intergenic 20.0%
!!! TTTTTTTCCCAAATTATGAA+TGG + chr7.3:83390746-83390765 None:intergenic 20.0%
! AATCATATTCATCAAAGCTT+GGG - chr7.3:83389339-83389358 MS.gene44644:intron 25.0%
! AATGAATAAACCAACTAATG+GGG + chr7.3:83391288-83391307 None:intergenic 25.0%
! ATACAATACACATCAAATGA+TGG - chr7.3:83389103-83389122 MS.gene44644:intron 25.0%
! ATGAATATTGGATTATTCAC+TGG - chr7.3:83391127-83391146 MS.gene44644:intron 25.0%
! ATTGGAAGCTACAAAATATA+TGG - chr7.3:83392625-83392644 MS.gene44644:CDS 25.0%
! ATTGTTTGAAAGAAGAATGA+AGG + chr7.3:83388986-83389005 None:intergenic 25.0%
! ATTTGGATAAGATAAAGCAA+AGG - chr7.3:83389593-83389612 MS.gene44644:intron 25.0%
! CTTCAATCCATTCATAATTT+GGG - chr7.3:83390736-83390755 MS.gene44644:intron 25.0%
! CTTCATTAAGCACATAATAT+TGG - chr7.3:83391431-83391450 MS.gene44644:intron 25.0%
! GATAAATTCACATAAAAGTG+AGG + chr7.3:83391913-83391932 None:intergenic 25.0%
! GTATGTTAAGAAAAAATGCA+GGG + chr7.3:83392098-83392117 None:intergenic 25.0%
! TAGAAGAAGATGTATTCTAT+TGG + chr7.3:83388938-83388957 None:intergenic 25.0%
! TATTAATCTTCTCATCAACA+GGG + chr7.3:83392520-83392539 None:intergenic 25.0%
! TGTATGTTAAGAAAAAATGC+AGG + chr7.3:83392099-83392118 None:intergenic 25.0%
! TGTTAACTTCTAATGAAAAG+AGG - chr7.3:83392072-83392091 MS.gene44644:CDS 25.0%
! TTACATGTTCAAATGCATTT+CGG - chr7.3:83391791-83391810 MS.gene44644:CDS 25.0%
! TTGGTCAGAAATAGAAAATT+GGG - chr7.3:83392283-83392302 MS.gene44644:CDS 25.0%
! TTGTCATTGTCTTTCAATTT+CGG + chr7.3:83392396-83392415 None:intergenic 25.0%
! TTGTTTGAAAGAAGAATGAA+GGG + chr7.3:83388985-83389004 None:intergenic 25.0%
! TTTCACTCTTTAACATTTCA+GGG - chr7.3:83392178-83392197 MS.gene44644:CDS 25.0%
! TTTGGATAAGATAAAGCAAA+GGG - chr7.3:83389594-83389613 MS.gene44644:intron 25.0%
! TTTGGTCAGAAATAGAAAAT+TGG - chr7.3:83392282-83392301 MS.gene44644:CDS 25.0%
!! AAAATCAATTTTTGTCACCA+TGG - chr7.3:83391985-83392004 MS.gene44644:CDS 25.0%
!! AAATAGTCTGGACAATATTT+TGG + chr7.3:83390663-83390682 None:intergenic 25.0%
!! AATTTTTCTGTTTGATTCAG+GGG - chr7.3:83391083-83391102 MS.gene44644:intron 25.0%
!! ACAAACGATGATATATTTTG+CGG + chr7.3:83389661-83389680 None:intergenic 25.0%
!! ATTCCTTCAAATTGATTCAT+TGG - chr7.3:83391395-83391414 MS.gene44644:intron 25.0%
!! CAAATTTTTCTGTTTGATTC+AGG - chr7.3:83391081-83391100 MS.gene44644:intron 25.0%
!! CCAATAGCAAATAACTATTT+TGG - chr7.3:83389796-83389815 MS.gene44644:intron 25.0%
!! GAAAGTGAAGATTTAAGATT+TGG + chr7.3:83389013-83389032 None:intergenic 25.0%
!! TCGTTCTTTTATACCATATT+TGG - chr7.3:83389204-83389223 MS.gene44644:CDS 25.0%
!! TTGATAGCAAATATTGTGAT+AGG - chr7.3:83392792-83392811 MS.gene44644:CDS 25.0%
!! TTTTCACTCTTTAACATTTC+AGG - chr7.3:83392177-83392196 MS.gene44644:CDS 25.0%
!!! AAAACCACTTTTTGGAAAAA+AGG + chr7.3:83389272-83389291 None:intergenic 25.0%
!!! AAATAGTTATTTGCTATTGG+TGG + chr7.3:83389796-83389815 None:intergenic 25.0%
!!! ACTATTTTGGAAACTGTATT+TGG - chr7.3:83389809-83389828 MS.gene44644:intron 25.0%
!!! AGAGAAGGATTTGAAATTTT+TGG - chr7.3:83389988-83390007 MS.gene44644:intron 25.0%
!!! ATAACCTTTTTTCCAAAAAG+TGG - chr7.3:83389265-83389284 MS.gene44644:CDS 25.0%
!!! CCAAAATAGTTATTTGCTAT+TGG + chr7.3:83389799-83389818 None:intergenic 25.0%
!!! CTATTTTGGAAACTGTATTT+GGG - chr7.3:83389810-83389829 MS.gene44644:intron 25.0%
!!! GAATTTGTTGATTCCAAATA+TGG + chr7.3:83389220-83389239 None:intergenic 25.0%
!!! GATCTTTCATTATTAGCTTT+AGG + chr7.3:83392235-83392254 None:intergenic 25.0%
!!! GATTTCTTGTTATTCCTTTA+AGG - chr7.3:83390454-83390473 MS.gene44644:intron 25.0%
!!! TATTTTGGAAACTGTATTTG+GGG - chr7.3:83389811-83389830 MS.gene44644:intron 25.0%
!!! TCACTTTTTTCGACATATTT+TGG - chr7.3:83388900-83388919 MS.gene44644:intron 25.0%
!!! TTTTGAAAAGAAAACACAAG+TGG - chr7.3:83390426-83390445 MS.gene44644:intron 25.0%
AAATTGAAAGAAGAAAACGC+AGG + chr7.3:83390696-83390715 None:intergenic 30.0%
AGAAGATGTATTCTATTGGA+TGG + chr7.3:83388934-83388953 None:intergenic 30.0%
AGTGAAACGAAAAAAAACGT+AGG + chr7.3:83390881-83390900 None:intergenic 30.0%
AGTTAGAACCTTTATTCAAC+AGG - chr7.3:83389416-83389435 MS.gene44644:intron 30.0%
ATGATTTCCCTGTTGAATAA+AGG + chr7.3:83389427-83389446 None:intergenic 30.0%
ATTAATCTTCTCATCAACAG+GGG + chr7.3:83392519-83392538 None:intergenic 30.0%
CAACCAATGAATCAATTTGA+AGG + chr7.3:83391401-83391420 None:intergenic 30.0%
CAATCATATTCATCAAAGCT+TGG - chr7.3:83389338-83389357 MS.gene44644:intron 30.0%
CAATTGATGTTTGCTTTACT+TGG - chr7.3:83392117-83392136 MS.gene44644:CDS 30.0%
CCTTCAATCCATTCATAATT+TGG - chr7.3:83390735-83390754 MS.gene44644:intron 30.0%
CTAGGAGCAAATAATTCTTA+AGG + chr7.3:83392840-83392859 None:intergenic 30.0%
GAAAAAAGTGAGAGAAATTG+AGG + chr7.3:83388891-83388910 None:intergenic 30.0%
GTATTAATCTTCTCATCAAC+AGG + chr7.3:83392521-83392540 None:intergenic 30.0%
GTGAAACGAAAAAAAACGTA+GGG + chr7.3:83390880-83390899 None:intergenic 30.0%
GTTAGAACCTTTATTCAACA+GGG - chr7.3:83389417-83389436 MS.gene44644:intron 30.0%
TATGATTTCACTGCTGAAAT+TGG - chr7.3:83392752-83392771 MS.gene44644:CDS 30.0%
TCAAATGCATTTCGGAATTA+CGG - chr7.3:83391799-83391818 MS.gene44644:CDS 30.0%
TGATTATTAGGCTTGGATTT+GGG + chr7.3:83392334-83392353 None:intergenic 30.0%
TTCACTCTTTAACATTTCAG+GGG - chr7.3:83392179-83392198 MS.gene44644:CDS 30.0%
TTGATTATTAGGCTTGGATT+TGG + chr7.3:83392335-83392354 None:intergenic 30.0%
TTTAGCACATTGTTTCATGA+AGG - chr7.3:83390186-83390205 MS.gene44644:intron 30.0%
TTTGTAGCTTCCAATAATCT+AGG + chr7.3:83392620-83392639 None:intergenic 30.0%
! CACGTATCATATCACATTTT+GGG - chr7.3:83392939-83392958 MS.gene44644:CDS 30.0%
! CTATCATTGATTATTAGGCT+TGG + chr7.3:83392341-83392360 None:intergenic 30.0%
! GAATTATTTGCTCCTAGTTT+TGG - chr7.3:83392843-83392862 MS.gene44644:CDS 30.0%
! GCATTGAGAAAATTCTTTTG+TGG + chr7.3:83392585-83392604 None:intergenic 30.0%
! TAGGAATAAGTTGAATGAGA+GGG + chr7.3:83391008-83391027 None:intergenic 30.0%
! TATTTAGGATCTCTTTCTTC+TGG + chr7.3:83392543-83392562 None:intergenic 30.0%
! TCACGTATCATATCACATTT+TGG - chr7.3:83392938-83392957 MS.gene44644:CDS 30.0%
! TGATCGAGTTATTTCCATTT+GGG + chr7.3:83389456-83389475 None:intergenic 30.0%
! TGGTTGTGATTGTTTGATTT+GGG - chr7.3:83391147-83391166 MS.gene44644:intron 30.0%
! TTGATCGAGTTATTTCCATT+TGG + chr7.3:83389457-83389476 None:intergenic 30.0%
! TTTGAAGCTAAGATTTGTAG+TGG - chr7.3:83391847-83391866 MS.gene44644:CDS 30.0%
!! AAGAAGTATCCAACTCAAAA+AGG - chr7.3:83389487-83389506 MS.gene44644:intron 30.0%
!! ATTTTGGAAACTGTATTTGG+GGG - chr7.3:83389812-83389831 MS.gene44644:intron 30.0%
!! CCAAATTATGAATGGATTGA+AGG + chr7.3:83390738-83390757 None:intergenic 30.0%
!! CTTTTAGAGGCTATACAATA+GGG - chr7.3:83391352-83391371 MS.gene44644:intron 30.0%
!! TTATTGGTGTTAGGTTACAT+GGG + chr7.3:83390519-83390538 None:intergenic 30.0%
!! TTTATTGGTGTTAGGTTACA+TGG + chr7.3:83390520-83390539 None:intergenic 30.0%
!!! ATGGTGTTTTTTTAGTTGCT+AGG - chr7.3:83389875-83389894 MS.gene44644:intron 30.0%
!!! CTTTGAGTTTTGGTTCAAAA+GGG + chr7.3:83389537-83389556 None:intergenic 30.0%
!!! TCTTTGAGTTTTGGTTCAAA+AGG + chr7.3:83389538-83389557 None:intergenic 30.0%
!!! TTGAAATTTTTGGAGTTGCA+GGG - chr7.3:83389998-83390017 MS.gene44644:intron 30.0%
!!! TTTGAAATTTTTGGAGTTGC+AGG - chr7.3:83389997-83390016 MS.gene44644:intron 30.0%
!!! TTTTCGACATATTTTGGCTA+AGG - chr7.3:83388906-83388925 MS.gene44644:intron 30.0%
!!! TTTTGTTTTCCCCCAAATTA+TGG + chr7.3:83390956-83390975 None:intergenic 30.0%
!!! TTTTTGAGTTGGATACTTCT+TGG + chr7.3:83389488-83389507 None:intergenic 30.0%
AAAATAAAGGTCTGCGATTG+TGG - chr7.3:83391668-83391687 MS.gene44644:intron 35.0%
AACGAAAAAAAACGTAGGGA+TGG + chr7.3:83390876-83390895 None:intergenic 35.0%
ACCGAAAATGTTACCTTAGA+AGG + chr7.3:83393016-83393035 None:intergenic 35.0%
ACGAAAAAAAACGTAGGGAT+GGG + chr7.3:83390875-83390894 None:intergenic 35.0%
AGCTCTATGCATAACTAACA+TGG - chr7.3:83391609-83391628 MS.gene44644:intron 35.0%
ATAGATAGAGGTTTAGCCAT+TGG - chr7.3:83390090-83390109 MS.gene44644:intron 35.0%
ATGATGAGTGCTTATTCCAA+TGG + chr7.3:83389296-83389315 None:intergenic 35.0%
ATTTCTTCCCTCTCATCTTT+GGG - chr7.3:83390814-83390833 MS.gene44644:intron 35.0%
CAAATTCAATGGAGTACATG+TGG + chr7.3:83390549-83390568 None:intergenic 35.0%
CAATGATAGAGTTACAAGCT+TGG - chr7.3:83392352-83392371 MS.gene44644:CDS 35.0%
CCTAAATACTCTTCTTCAGA+CGG + chr7.3:83392677-83392696 None:intergenic 35.0%
CCTATTGTATAGCCTCTAAA+AGG + chr7.3:83391354-83391373 None:intergenic 35.0%
CTCATTCAACTTATTCCTAG+CGG - chr7.3:83391009-83391028 MS.gene44644:intron 35.0%
CTGGTTGTGATTGTTTGATT+TGG - chr7.3:83391146-83391165 MS.gene44644:intron 35.0%
GAAATCATTCAAGACCCAAA+TGG - chr7.3:83389439-83389458 MS.gene44644:intron 35.0%
GGAGAAGAAAGAAAATAGTC+TGG + chr7.3:83390675-83390694 None:intergenic 35.0%
GGGGATTTATGAATTATGCT+TGG - chr7.3:83391167-83391186 MS.gene44644:intron 35.0%
TAGGTGTGTATTTGATTCCA+TGG + chr7.3:83392005-83392024 None:intergenic 35.0%
TCTAACTCTTGCAATAGAGT+TGG + chr7.3:83389403-83389422 None:intergenic 35.0%
TCTTTAACATTTCAGGGGAA+TGG - chr7.3:83392184-83392203 MS.gene44644:CDS 35.0%
TGAAACTCCATAATCTCTCA+CGG - chr7.3:83390928-83390947 MS.gene44644:intron 35.0%
TGAAATTGGAAAGTTTGCGA+AGG - chr7.3:83392766-83392785 MS.gene44644:CDS 35.0%
TGACAGAGATGAGTTTCTTA+GGG + chr7.3:83390847-83390866 None:intergenic 35.0%
TTGTTCAACTTACTGCTTCA+TGG - chr7.3:83391508-83391527 MS.gene44644:intron 35.0%
TTTAGCTGGTAACATCGTTT+GGG - chr7.3:83389057-83389076 MS.gene44644:intron 35.0%
! AATTTTGGACAATACCCTTG+TGG - chr7.3:83392474-83392493 MS.gene44644:CDS 35.0%
! ATTTTCTCAATGCATTGCCT+AGG - chr7.3:83392592-83392611 MS.gene44644:CDS 35.0%
! CAACATGCTGCACTTAATTT+TGG - chr7.3:83392459-83392478 MS.gene44644:CDS 35.0%
! CAATAGAGTTGGTTTCTCTT+TGG + chr7.3:83389392-83389411 None:intergenic 35.0%
! CATTCTTGTTTGACAAGAGA+AGG - chr7.3:83389973-83389992 MS.gene44644:intron 35.0%
! CCAAAAAGTGGTTTTTCCAT+TGG - chr7.3:83389277-83389296 MS.gene44644:CDS 35.0%
! CTAGGAATAAGTTGAATGAG+AGG + chr7.3:83391009-83391028 None:intergenic 35.0%
! GACTTTACGATTCCTTTTAG+AGG - chr7.3:83391339-83391358 MS.gene44644:intron 35.0%
! TCAAATACACACCTAGCTTT+AGG - chr7.3:83392010-83392029 MS.gene44644:CDS 35.0%
! TGAAAAGGGTTTTCTTGAAG+AGG - chr7.3:83389927-83389946 MS.gene44644:intron 35.0%
! TTCCAATAATCTAGGATCCT+AGG + chr7.3:83392612-83392631 None:intergenic 35.0%
!! AAGAAGAGTATTTAGGTGAG+AGG - chr7.3:83392681-83392700 MS.gene44644:CDS 35.0%
!! CAGAAGATGGTCTTGTAATT+TGG - chr7.3:83392264-83392283 MS.gene44644:CDS 35.0%
!! CCAATGGAAAAACCACTTTT+TGG + chr7.3:83389280-83389299 None:intergenic 35.0%
!! CCTTTTAGAGGCTATACAAT+AGG - chr7.3:83391351-83391370 MS.gene44644:intron 35.0%
!! CTTGTTATTCCTTTAAGGTG+AGG - chr7.3:83390459-83390478 MS.gene44644:intron 35.0%
!! GAAATAGTGTCGATAGATAG+AGG - chr7.3:83390078-83390097 MS.gene44644:intron 35.0%
!! GAATGGATTGAAGGAAGTAA+TGG + chr7.3:83390729-83390748 None:intergenic 35.0%
!! GGTTGTGATTGTTTGATTTG+GGG - chr7.3:83391148-83391167 MS.gene44644:intron 35.0%
!! TAAAGGAAGAAAGTGTTGGA+GGG + chr7.3:83389041-83389060 None:intergenic 35.0%
!! TGTTTGCTTTACTTGGTGTA+AGG - chr7.3:83392124-83392143 MS.gene44644:CDS 35.0%
!! TTGTGTTTGCTGTAGATTGT+AGG - chr7.3:83389758-83389777 MS.gene44644:intron 35.0%
!!! ACTCATTGATTTTAGAGAGC+AGG - chr7.3:83390216-83390235 MS.gene44644:intron 35.0%
!!! ATTTTGGGAAGCATTATGGT+TGG - chr7.3:83392954-83392973 MS.gene44644:CDS 35.0%
!!! CTTTCGTTTCCTTTTTGAGT+TGG + chr7.3:83389499-83389518 None:intergenic 35.0%
!!! GCCTTCTAAGGTAACATTTT+CGG - chr7.3:83393012-83393031 MS.gene44644:CDS 35.0%
!!! TACATGTGGCTGCTTTTTAT+TGG + chr7.3:83390535-83390554 None:intergenic 35.0%
!!! TCACATTTTGGGAAGCATTA+TGG - chr7.3:83392950-83392969 MS.gene44644:CDS 35.0%
AAGGGTCTGATTGTGAATCT+GGG + chr7.3:83388967-83388986 None:intergenic 40.0%
ACTCATCATGCTGTTCTTGA+TGG - chr7.3:83389307-83389326 MS.gene44644:intron 40.0%
AGTTGAATGAGAGGGATGAA+AGG + chr7.3:83391000-83391019 None:intergenic 40.0%
ATCCAAGAGAATGCCTTCTA+AGG - chr7.3:83393000-83393019 MS.gene44644:CDS 40.0%
ATTAAGTGCAGCATGTTGCA+CGG + chr7.3:83392457-83392476 None:intergenic 40.0%
CAAACGATGTTACCAGCTAA+AGG + chr7.3:83389058-83389077 None:intergenic 40.0%
CAAAGATGAGAGGGAAGAAA+TGG + chr7.3:83390815-83390834 None:intergenic 40.0%
CAACACTTTCTTCCTTTAGC+TGG - chr7.3:83389043-83389062 MS.gene44644:intron 40.0%
CATTTCTTCCCTCTCATCTT+TGG - chr7.3:83390813-83390832 MS.gene44644:intron 40.0%
CTCTCACGGTTCCATAATTT+GGG - chr7.3:83390942-83390961 MS.gene44644:intron 40.0%
CTGTTTGATTCAGGGGTTTA+GGG - chr7.3:83391090-83391109 MS.gene44644:intron 40.0%
CTTTAGCTGGTAACATCGTT+TGG - chr7.3:83389056-83389075 MS.gene44644:intron 40.0%
GATCACTCTTATGCAGAAGA+TGG - chr7.3:83392251-83392270 MS.gene44644:CDS 40.0%
GTAACACCAAGTCCAAAACT+AGG + chr7.3:83392858-83392877 None:intergenic 40.0%
GTATGACATCGATCTTGGTT+GGG - chr7.3:83390038-83390057 MS.gene44644:intron 40.0%
GTGACAGAGATGAGTTTCTT+AGG + chr7.3:83390848-83390867 None:intergenic 40.0%
GTTGCAGGGTCTAATAGATT+TGG - chr7.3:83390012-83390031 MS.gene44644:intron 40.0%
TAACCTCAATCGCGAAGATT+TGG - chr7.3:83389576-83389595 MS.gene44644:intron 40.0%
TACTTACTTGCAAATCCGCT+AGG + chr7.3:83391027-83391046 None:intergenic 40.0%
TATCCAAATCTTCGCGATTG+AGG + chr7.3:83389582-83389601 None:intergenic 40.0%
TATCGACACTATTTCCACCT+TGG + chr7.3:83390073-83390092 None:intergenic 40.0%
TATGACATCGATCTTGGTTG+GGG - chr7.3:83390039-83390058 MS.gene44644:intron 40.0%
TATGGAACCGTGAGAGATTA+TGG + chr7.3:83390938-83390957 None:intergenic 40.0%
TCTCACGGTTCCATAATTTG+GGG - chr7.3:83390943-83390962 MS.gene44644:intron 40.0%
TCTCTCACGGTTCCATAATT+TGG - chr7.3:83390941-83390960 MS.gene44644:intron 40.0%
TCTGTTTGATTCAGGGGTTT+AGG - chr7.3:83391089-83391108 MS.gene44644:intron 40.0%
TGAGAGAAATTGAGGTTGTC+TGG + chr7.3:83388883-83388902 None:intergenic 40.0%
TGCCTAGGATCCTAGATTAT+TGG - chr7.3:83392607-83392626 MS.gene44644:CDS 40.0%
TGGGTAGTAATAGTTCACGT+AGG + chr7.3:83392315-83392334 None:intergenic 40.0%
TGTATGACATCGATCTTGGT+TGG - chr7.3:83390037-83390056 MS.gene44644:intron 40.0%
TTGAAATCTGCCCCATTAGT+TGG - chr7.3:83391275-83391294 MS.gene44644:intron 40.0%
TTGCTGTAGATTGTAGGACA+AGG - chr7.3:83389764-83389783 MS.gene44644:intron 40.0%
TTTCTTCCCTCTCATCTTTG+GGG - chr7.3:83390815-83390834 MS.gene44644:intron 40.0%
! AACTGCCCATGTGTTTCTAA+AGG + chr7.3:83390494-83390513 None:intergenic 40.0%
! AGCCTACCTTTAGAAACACA+TGG - chr7.3:83390485-83390504 MS.gene44644:intron 40.0%
! CAGCTAAAGGAAGAAAGTGT+TGG + chr7.3:83389045-83389064 None:intergenic 40.0%
! CATTTTCCCCAAAGATGAGA+GGG + chr7.3:83390824-83390843 None:intergenic 40.0%
! CTAAGGTAACATTTTCGGTG+TGG - chr7.3:83393017-83393036 MS.gene44644:CDS 40.0%
! GCCTACCTTTAGAAACACAT+GGG - chr7.3:83390486-83390505 MS.gene44644:intron 40.0%
! TAGAGGTTTAGCCATTGGTT+TGG - chr7.3:83390095-83390114 MS.gene44644:intron 40.0%
! TAGGTTGGGATTGTGTGAAT+GGG - chr7.3:83392029-83392048 MS.gene44644:CDS 40.0%
! TGTGTTTCTAAAGGTAGGCT+AGG + chr7.3:83390485-83390504 None:intergenic 40.0%
! TTTGCTATCTGCCAAACCAA+TGG + chr7.3:83390109-83390128 None:intergenic 40.0%
!! AGCAAAGGGTGTTATCAACA+TGG - chr7.3:83389608-83389627 MS.gene44644:intron 40.0%
!! ATACACACCTAGCTTTAGGT+TGG - chr7.3:83392014-83392033 MS.gene44644:CDS 40.0%
!! CCGTCTGAAGAAGAGTATTT+AGG - chr7.3:83392674-83392693 MS.gene44644:CDS 40.0%
!! CGAACACAGTCTTTGAGTTT+TGG + chr7.3:83389547-83389566 None:intergenic 40.0%
!! CTAAAGGAAGAAAGTGTTGG+AGG + chr7.3:83389042-83389061 None:intergenic 40.0%
!! GCAAAGGGTGTTATCAACAT+GGG - chr7.3:83389609-83389628 MS.gene44644:intron 40.0%
!! TACACACCTAGCTTTAGGTT+GGG - chr7.3:83392015-83392034 MS.gene44644:CDS 40.0%
!! TACCTTAGAAGGCATTCTCT+TGG + chr7.3:83393005-83393024 None:intergenic 40.0%
!! TTAGGTTGGGATTGTGTGAA+TGG - chr7.3:83392028-83392047 MS.gene44644:CDS 40.0%
!!! GGCTGCTTTTTATTGGTGTT+AGG + chr7.3:83390528-83390547 None:intergenic 40.0%
!!! TTTGCTCCTAGTTTTGGACT+TGG - chr7.3:83392849-83392868 MS.gene44644:CDS 40.0%
ACTTACTGCTTCATGGTGCA+TGG - chr7.3:83391515-83391534 MS.gene44644:intron 45.0%
AGAGGCAACAACCTTCGATT+TGG - chr7.3:83392699-83392718 MS.gene44644:CDS 45.0%
ATCTGACTCTGCAATGAGCA+AGG + chr7.3:83389134-83389153 None:intergenic 45.0%
CACAATCCCAACCTAAAGCT+AGG + chr7.3:83392024-83392043 None:intergenic 45.0%
CTAACGAATAAGCGCAAGCA+AGG + chr7.3:83389684-83389703 None:intergenic 45.0%
CTCACGGTTCCATAATTTGG+GGG - chr7.3:83390944-83390963 MS.gene44644:intron 45.0%
GAAGGGTCTGATTGTGAATC+TGG + chr7.3:83388968-83388987 None:intergenic 45.0%
GAATGGGAAGAGATGCTCTT+AGG - chr7.3:83392045-83392064 MS.gene44644:CDS 45.0%
GACACTATTTCCACCTTGGT+TGG + chr7.3:83390069-83390088 None:intergenic 45.0%
GAGGGAAGAAATGGTATGAG+TGG + chr7.3:83390806-83390825 None:intergenic 45.0%
GATAGCAAAGATGGAAGTGG+TGG - chr7.3:83390120-83390139 MS.gene44644:intron 45.0%
GCAGACCAAACACAACATAG+TGG + chr7.3:83393071-83393090 None:intergenic 45.0%
GCAGATAGCAAAGATGGAAG+TGG - chr7.3:83390117-83390136 MS.gene44644:intron 45.0%
GGTGTGTATGACATCGATCT+TGG - chr7.3:83390033-83390052 MS.gene44644:intron 45.0%
GGTTTGGCAGATAGCAAAGA+TGG - chr7.3:83390111-83390130 MS.gene44644:intron 45.0%
GTCTGATTGTGAATCTGGGA+GGG + chr7.3:83388963-83388982 None:intergenic 45.0%
TTCAGACGGATGAGTCGAAT+GGG + chr7.3:83392663-83392682 None:intergenic 45.0%
TTGGACAATACCCTTGTGGA+GGG - chr7.3:83392478-83392497 MS.gene44644:CDS 45.0%
TTTGGACAATACCCTTGTGG+AGG - chr7.3:83392477-83392496 MS.gene44644:CDS 45.0%
! CGAGACAGAGAAGCTTCTTT+TGG + chr7.3:83389187-83389206 None:intergenic 45.0%
! GAAGTGGTGGAGTTGAAGTT+GGG - chr7.3:83390133-83390152 MS.gene44644:intron 45.0%
! GCATTTTCCCCAAAGATGAG+AGG + chr7.3:83390825-83390844 None:intergenic 45.0%
! GCCCATGTGTTTCTAAAGGT+AGG + chr7.3:83390490-83390509 None:intergenic 45.0%
! GCTTTAGGCCATGTTGTGTT+GGG + chr7.3:83392220-83392239 None:intergenic 45.0%
! GTTAGAGTTCTAGCAGAACG+TGG - chr7.3:83391314-83391333 MS.gene44644:intron 45.0%
!! AGCTTTAGGCCATGTTGTGT+TGG + chr7.3:83392221-83392240 None:intergenic 45.0%
!! AGGTAACATTTTCGGTGTGG+TGG - chr7.3:83393020-83393039 MS.gene44644:CDS 45.0%
!! CAACAACCTTCGATTTGGAC+TGG - chr7.3:83392704-83392723 MS.gene44644:CDS 45.0%
!!! AGCGGAGGTTTTTTGGACTA+AGG - chr7.3:83393043-83393062 MS.gene44644:CDS 45.0%
!!! CGGAGGTTTTTTGGACTAAG+GGG - chr7.3:83393045-83393064 MS.gene44644:CDS 45.0%
!!! GCGGAGGTTTTTTGGACTAA+GGG - chr7.3:83393044-83393063 MS.gene44644:CDS 45.0%
AGGGGCCACTATGTTGTGTT+TGG - chr7.3:83393063-83393082 MS.gene44644:CDS 50.0%
CTCATCAACAGGGGACGATT+TGG + chr7.3:83392510-83392529 None:intergenic 50.0%
CTTCAGACGGATGAGTCGAA+TGG + chr7.3:83392664-83392683 None:intergenic 50.0%
GCATCACCAGTCCAAATCGA+AGG + chr7.3:83392713-83392732 None:intergenic 50.0%
GGTCTGATTGTGAATCTGGG+AGG + chr7.3:83388964-83388983 None:intergenic 50.0%
GTACCTGACCCAACACAACA+TGG - chr7.3:83392209-83392228 MS.gene44644:CDS 50.0%
TAGGCTAGGCCTCACCTTAA+AGG + chr7.3:83390471-83390490 None:intergenic 50.0%
TGGTTGGGGAAAACCAACCA+AGG - chr7.3:83390053-83390072 MS.gene44644:intron 50.0%
TTCATGGTGCATGGCATCAG+TGG - chr7.3:83391524-83391543 MS.gene44644:intron 50.0%
TTGGCATGTACCCTCCACAA+GGG + chr7.3:83392491-83392510 None:intergenic 50.0%
TTGGGGAAAACCAACCAAGG+TGG - chr7.3:83390056-83390075 MS.gene44644:intron 50.0%
TTTGGCATGTACCCTCCACA+AGG + chr7.3:83392492-83392511 None:intergenic 50.0%
! GAGGTTGTCTGGCTTGATGA+TGG + chr7.3:83388872-83388891 None:intergenic 50.0%
! GGAAGTGGTGGAGTTGAAGT+TGG - chr7.3:83390132-83390151 MS.gene44644:intron 50.0%
! GGTATGAGTGGAGAGTACAG+AGG + chr7.3:83390794-83390813 None:intergenic 50.0%
! TGAGTGGAGAGTACAGAGGA+TGG + chr7.3:83390790-83390809 None:intergenic 50.0%
!! ACATTTTCGGTGTGGTGGAG+CGG - chr7.3:83393025-83393044 MS.gene44644:CDS 50.0%
!! GAGGGATGAAAGGCTTTGAG+TGG + chr7.3:83390990-83391009 None:intergenic 50.0%
!! GGACTTGGTGTTACATGCAG+AGG - chr7.3:83392864-83392883 MS.gene44644:CDS 50.0%
!! GTTGTCTGGCTTGATGATGG+AGG + chr7.3:83388869-83388888 None:intergenic 50.0%
AGGCCATGTTGTGTTGGGTC+AGG + chr7.3:83392215-83392234 None:intergenic 55.0%
!!! GTGGTGGAGCGGAGGTTTTT+TGG - chr7.3:83393036-83393055 MS.gene44644:CDS 55.0%
GTCTGCTGCTGTGCAGAGTC+CGG - chr7.3:83393085-83393104 MS.gene44644:CDS 60.0%
!! TTTTCGGTGTGGTGGAGCGG+AGG - chr7.3:83393028-83393047 MS.gene44644:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 83388818 83393115 83388818 ID=MS.gene44644
chr7.3 mRNA 83388818 83393115 83388818 ID=MS.gene44644.t1;Parent=MS.gene44644
chr7.3 exon 83391760 83393115 83391760 ID=MS.gene44644.t1.exon1;Parent=MS.gene44644.t1
chr7.3 CDS 83391760 83393115 83391760 ID=cds.MS.gene44644.t1;Parent=MS.gene44644.t1
chr7.3 exon 83389146 83389319 83389146 ID=MS.gene44644.t1.exon2;Parent=MS.gene44644.t1
chr7.3 CDS 83389146 83389319 83389146 ID=cds.MS.gene44644.t1;Parent=MS.gene44644.t1
chr7.3 exon 83388818 83388832 83388818 ID=MS.gene44644.t1.exon3;Parent=MS.gene44644.t1
chr7.3 CDS 83388818 83388832 83388818 ID=cds.MS.gene44644.t1;Parent=MS.gene44644.t1
Gene Sequence

>MS.gene44644

ATGGCTTACAACAACAACATTAAAATTCACGAACACATCAAAGTTGTTCCTCCATCATCAAGCCAGACAACCTCAATTTCTCTCACTTTTTTCGACATATTTTGGCTAAGGTTCCATCCAATAGAATACATCTTCTTCTACACCCTCCCAGATTCACAATCAGACCCTTCATTCTTCTTTCAAACAATTGTTCCAAATCTTAAATCTTCACTTTCTTTGACCCTCCAACACTTTCTTCCTTTAGCTGGTAACATCGTTTGGGATTTTGAATCACAAAACCCAAAAATACAATACACATCAAATGATGGTGTTTCCTTGCTCATTGCAGAGTCAGATTTAGATTTCAATCATGTAATTGAAAACTCACCAAAAGAAGCTTCTCTGTCTCGTTCTTTTATACCATATTTGGAATCAACAAATTCTTTTGCTTCTATTATCTCACTCCAAATAACCTTTTTTCCAAAAAGTGGTTTTTCCATTGGAATAAGCACTCATCATGCTGTTCTTGATGGAAAATCTTCAATCATATTCATCAAAGCTTGGGCTTATCTATGCAAAAAATCAATTGAAACCAAAGAGAAACCAACTCTATTGCAAGAGTTAGAACCTTTATTCAACAGGGAAATCATTCAAGACCCAAATGGAAATAACTCGATCAAGATATTATCCAAGAAGTATCCAACTCAAAAAGGAAACGAAAGAAGTTTAAAGAATTTCCCTTTTGAACCAAAACTCAAAGACTGTGTTCGCGCTACTTTTAACCTCAATCGCGAAGATTTGGATAAGATAAAGCAAAGGGTGTTATCAACATGGGAAACATTCGATACAAGAGAATCAAAGCCGCAAAATATATCATCGTTTGTCCTTGCTTGCGCTTATTCGTTAGTTTGTCTTGCGAAAGCAATCCATAAAGTTCAAAATTATCAAGAAAAGTTTGGTTTTGTGTTTGCTGTAGATTGTAGGACAAGGTTAAAACCACCAATAGCAAATAACTATTTTGGAAACTGTATTTGGGGGCATTTCATTGATGCTCAACCGTTAGATTTTATAAAAGAAGATGGTGTTTTTTTAGTTGCTAGGAGTATTTATGAGAGAATAAAGATGATAAATGAAAAGGGTTTTCTTGAAGAGGCTATTGATGATGTGTATAATAAACATTCTTGTTTGACAAGAGAAGGATTTGAAATTTTTGGAGTTGCAGGGTCTAATAGATTTGGTGTGTATGACATCGATCTTGGTTGGGGAAAACCAACCAAGGTGGAAATAGTGTCGATAGATAGAGGTTTAGCCATTGGTTTGGCAGATAGCAAAGATGGAAGTGGTGGAGTTGAAGTTGGGCTTGTTCTTAATAAACATGTAATGAATTTATTTAGCACATTGTTTCATGAAGGATTATGCACTCATTGATTTTAGAGAGCAGGTACAACCATGTAATTCAAATAAAATATATAGTTATTTGTTGGCTAATATTGATTTCAAATGAATTGATTTTATAAATTTGGTTTTGATTTATTAATATAAAATGATTTACGATTGAATTCATTTACATCGAAAAATATATATTTTTTTTATTTTTTTATGACAAATGTTAGTATTATATTTAATTTATTTTGAAAAGAAAACACAAGTGGATAATGATTTCTTGTTATTCCTTTAAGGTGAGGCCTAGCCTACCTTTAGAAACACATGGGCAGTTTACCCATGTAACCTAACACCAATAAAAAGCAGCCACATGTACTCCATTGAATTTGAAATACTTATTATTTAGTTTTATAGATTGTTACCATATACTTTTTATATTTTGCAGATTGACCCATGCATTAATTAAGTTTTTTATCTTCTCCAAAATATTGTCCAGACTATTTTCTTTCTTCTCCTGCGTTTTCTTCTTTCAATTTTTCAACTCAACCATTACTTCCTTCAATCCATTCATAATTTGGGAAAAAAAAATCATCAACATCAAATTCATCCATCCTCTGTACTCTCCACTCATACCATTTCTTCCCTCTCATCTTTGGGGAAAATGCCCTAAGAAACTCATCTCTGTCACAAAACCCATCCCTACGTTTTTTTTCGTTTCACTCTCTCACAGTTCTATATCTCTCTATGATGAAACTCCATAATCTCTCACGGTTCCATAATTTGGGGGAAAACAAAATTGATTCATCTCCACTCAAAGCCTTTCATCCCTCTCATTCAACTTATTCCTAGCGGATTTGCAAGTAAGTAATTTTTTCTCGTTTTAATTGCTATTTAAATGGTTCAAATTTTTCTGTTTGATTCAGGGGTTTAGGGTTCTCCATATTTTAATGAATATTGGATTATTCACTGGTTGTGATTGTTTGATTTGGGGATTTATGAATTATGCTTGGTCAGATACAAATATGTCATAATCCTTCTGCATATTATTTTATTCACTGCTCATGCTTTGTTTTGTCTTTTAATTTGGGAAGTTGCTTGAAATCTGCCCCATTAGTTGGTTTATTCATTTTTTTAGTTAGAGTTCTAGCAGAACGTGGTTGACTTTACGATTCCTTTTAGAGGCTATACAATAGGGATATTAATAGCAATAGCAATATTCCTTCAAATTGATTCATTGGTTGTGTTGTTCTTCTTCATTAAGCACATAATATTGGATTGATAGATGTATACTTATAGTTTTTGTATTTTGTGGACTGAATCTTAGATTGTTGTTCAACTTACTGCTTCATGGTGCATGGCATCAGTGGCTATGATTCCATTTTTTGTACTGAATATTGTAGCTTTATAACATGTATTCTAAAATGTTATTAGCTCTATGCATAACTAACATGGTTCAATAATTAATTTAAGACCTCAACTCTAAAGTTTAAAATAAAGGTCTGCGATTGTGGTATGTGATTGTATCAGCTGCACGCACACGCGCGCACACACACACATATATATTCAGTTTTGAATGAGTCAAAATTGATTCTATAAGTGTACAATTGTTTTTTACATGTTCAAATGCATTTCGGAATTACGGATTTTCACTCTAGAATTAATTCTAATTTGAAGCTAAGATTTGTAGTGGTTGCTCCAGACATGATTTTTACATTTATATTTATTGTTTACCTCACTTTTATGTGAATTTATCCAAATATAAGCCATTTTACATATAACTCAATTTTAACTAAAATCAATTTTACAAAATCAATTTTTGTCACCATGGAATCAAATACACACCTAGCTTTAGGTTGGGATTGTGTGAATGGGAAGAGATGCTCTTAGGATCTTGTTAACTTCTAATGAAAAGAGGCCCTGCATTTTTTCTTAACATACAATTGATGTTTGCTTTACTTGGTGTAAGGAAATGACATATTAAATAAATCTAACTAAGATTTTCACTCTTTAACATTTCAGGGGAATGGCAGTACCTGACCCAACACAACATGGCCTAAAGCTAATAATGAAAGATCACTCTTATGCAGAAGATGGTCTTGTAATTTGGTCAGAAATAGAAAATTGGGTCTGCACCTACGTGAACTATTACTACCCAAATCCAAGCCTAATAATCAATGATAGAGTTACAAGCTTGGTATTCTGAATCATGTTCGCCGAAATTGAAAGACAATGACAATCTTGTCTCAGTCCTAACAATCTTAATTTTGAATGGATCCGTGCAACATGCTGCACTTAATTTTGGACAATACCCTTGTGGAGGGTACATGCCAAATCGTCCCCTGTTGATGAGAAGATTAATACCAGAAGAAAGAGATCCTAAATATGCAAGTTTTATATCTGATCCACAAAAGAATTTTCTCAATGCATTGCCTAGGATCCTAGATTATTGGAAGCTACAAAATATATGGCTGTTGTTGACACCCATTCGACTCATCCGTCTGAAGAAGAGTATTTAGGTGAGAGGCAACAACCTTCGATTTGGACTGGTGATGCTGAGATTGTTGAAGCGTTTTATGATTTCACTGCTGAAATTGGAAAGTTTGCGAAGGTGATTGATAGCAAATATTGTGATAGGAGCTTGTGGTGCTGGTGTTTTGCCTTAAGAATTATTTGCTCCTAGTTTTGGACTTGGTGTTACATGCAGAGGCGTTCTAAATAGTGTGTCCACATAAAAATATGTCTAAAGTAAATAAATGAGTCACGTATCATATCACATTTTGGGAAGCATTATGGTTGGTTGATTTATTTATCAGTAGTAACATCCAAGAGAATGCCTTCTAAGGTAACATTTTCGGTGTGGTGGAGCGGAGGTTTTTTGGACTAAGGGGCCACTATGTTGTGTTTGGTCTGCTGCTGTGCAGAGTCCGGTTTGCTGA
Protein sequence

>MS.gene44644.t1

MAYNNNIKIHEHIKVVPPSSSQTTSISLTFFDIFWLRFHPIEYIFFYTLPDSQSDPSFFFQTIVPNLKSSLSLTLQHFLPLAGNIVWDFESQNPKIQYTSNDGVSLLIAESDLDFNHVIENSPKEASLSRSFIPYLESTNSFASIISLQITFFPKSGFSIGISTHHAVLDGKSSIIFIKAWAYLCKKSIETKEKPTLLQELEPLFNREIIQDPNGNNSIKILSKKYPTQKGNERSLKNFPFEPKLKDCVRATFNLNREDLDKIKQRVLSTWETFDTRESKPQNISSFVLACAYSLVCLAKAIHKVQNYQEKFGFVFAVDCRTRLKPPIANNYFGNCIWGHFIDAQPLDFIKEDGVFLVARSIYERIKMINEKGFLEEAIDDVYNKHSCLTREGFEIFGVAGSNRFGVYDIDLGWGKPTKVEIVSIDRGLAIGLADSKDGSGGVEVGLVLNKHDPRLLEATKYMAVVDTHSTHPSEEEYLGERQQPSIWTGDAEIVEAFYDFTAEIGKFAKSPVC