AlfalfaGEDB | MS.gene021904

M. sativa cultivar XinJiangDaYe / MS.gene021904

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016740 GO:0016746 GO:0016747
PFAM: PF02458.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene021904.t1	XP_013447578.1	85.8	485	63	5	1	481	1	483	2.50E-231	811.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene021904.t1	Q940Z5	36.8	489	267	14	4	477	6	467	5.8e-75	283.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene021904.t1	B4Y0U1	85.8	485	63	5	1	481	1	483	1.8e-231	811.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene021904	MS.gene02573	PPI
MS.gene021904	MS.gene028994	PPI
MS.gene012360	MS.gene021904	PPI
MS.gene021904	MS.gene91596	PPI
MS.gene44642	MS.gene021904	PPI
MS.gene021904	MS.gene31540	PPI
MS.gene91609	MS.gene021904	PPI
MS.gene021904	MS.gene87577	PPI
MS.gene99222	MS.gene021904	PPI
MS.gene011798	MS.gene021904	PPI
MS.gene021904	MS.gene000763	PPI
MS.gene032349	MS.gene021904	PPI
MS.gene021904	MS.gene91614	PPI
MS.gene066656	MS.gene021904	PPI
MS.gene021904	MS.gene91613	PPI
MS.gene021904	MS.gene90492	PPI
MS.gene021904	MS.gene043350	PPI
MS.gene066660	MS.gene021904	PPI
MS.gene021904	MS.gene56798	PPI
MS.gene021904	MS.gene50384	PPI
MS.gene066657	MS.gene021904	PPI
MS.gene021904	MS.gene066658	PPI
MS.gene021904	MS.gene87496	PPI
MS.gene021904	MS.gene070019	PPI
MS.gene021904	MS.gene043348	PPI
MS.gene021904	MS.gene021917	PPI
MS.gene069423	MS.gene021904	PPI
MS.gene35744	MS.gene021904	PPI
MS.gene021904	MS.gene021914	PPI
MS.gene44643	MS.gene021904	PPI
MS.gene028999	MS.gene021904	PPI
MS.gene021904	MS.gene028998	PPI
MS.gene50379	MS.gene021904	PPI
MS.gene021904	MS.gene56799	PPI
MS.gene021904	MS.gene063865	PPI
MS.gene021904	MS.gene44640	PPI
MS.gene44633	MS.gene021904	PPI
MS.gene021904	MS.gene44630	PPI
MS.gene021904	MS.gene90493	PPI
MS.gene021904	MS.gene069767	PPI
MS.gene073299	MS.gene021904	PPI
MS.gene91597	MS.gene021904	PPI
MS.gene021916	MS.gene021904	PPI
MS.gene32261	MS.gene021904	PPI
MS.gene31546	MS.gene021904	PPI
MS.gene021904	MS.gene011716	PPI
MS.gene35741	MS.gene021904	PPI
MS.gene021904	MS.gene28251	PPI
MS.gene99219	MS.gene021904	PPI
MS.gene021904	MS.gene91595	PPI
MS.gene021904	MS.gene90491	PPI
MS.gene90496	MS.gene021904	PPI
MS.gene91598	MS.gene021904	PPI
MS.gene021904	MS.gene016532	PPI
MS.gene56795	MS.gene021904	PPI
MS.gene021904	MS.gene043352	PPI
MS.gene021904	MS.gene38977	PPI
MS.gene021904	MS.gene44647	PPI
MS.gene021904	MS.gene066701	PPI
MS.gene021904	MS.gene021909	PPI
MS.gene021904	MS.gene021915	PPI
MS.gene021904	MS.gene50355	PPI
MS.gene021904	MS.gene91612	PPI
MS.gene028996	MS.gene021904	PPI
MS.gene021904	MS.gene011799	PPI
MS.gene021904	MS.gene50420	PPI
MS.gene000764	MS.gene021904	PPI
MS.gene91615	MS.gene021904	PPI
MS.gene021904	MS.gene064101	PPI
MS.gene021904	MS.gene96337	PPI
MS.gene021904	MS.gene31545	PPI
MS.gene38977	MS.gene021904	PPI
MS.gene021904	MS.gene50356	PPI
MS.gene021904	MS.gene87536	PPI
MS.gene021904	MS.gene56797	PPI
MS.gene021904	MS.gene99218	PPI
MS.gene99223	MS.gene021904	PPI
MS.gene021904	MS.gene069422	PPI
MS.gene90492	MS.gene021904	PPI
MS.gene48585	MS.gene021904	PPI
MS.gene011837	MS.gene021904	PPI
MS.gene066634	MS.gene021904	PPI
MS.gene043346	MS.gene021904	PPI
MS.gene91599	MS.gene021904	PPI
MS.gene021904	MS.gene78818	PPI
MS.gene021904	MS.gene91611	PPI
MS.gene021904	MS.gene011798	PPI
MS.gene49853	MS.gene021904	PPI
MS.gene063865	MS.gene021904	PPI
MS.gene021904	MS.gene35740	PPI
MS.gene007831	MS.gene021904	PPI
MS.gene021910	MS.gene021904	PPI
MS.gene021904	MS.gene002544	PPI
MS.gene44644	MS.gene021904	PPI
MS.gene35745	MS.gene021904	PPI
MS.gene011796	MS.gene021904	PPI
MS.gene011801	MS.gene021904	PPI
MS.gene87537	MS.gene021904	PPI
MS.gene021904	MS.gene021905	PPI
MS.gene021904	MS.gene070270	PPI
MS.gene48582	MS.gene021904	PPI
MS.gene60208	MS.gene021904	PPI
MS.gene90493	MS.gene021904	PPI
MS.gene021904	MS.gene50382	PPI
MS.gene021904	MS.gene90496	PPI
MS.gene013787	MS.gene021904	PPI
MS.gene021906	MS.gene021904	PPI
MS.gene31542	MS.gene021904	PPI
MS.gene87532	MS.gene021904	PPI
MS.gene021904	MS.gene44463	PPI
MS.gene46265	MS.gene021904	PPI
MS.gene063868	MS.gene021904	PPI
MS.gene48581	MS.gene021904	PPI
MS.gene021904	MS.gene87191	PPI
MS.gene021904	MS.gene56796	PPI
MS.gene021904	MS.gene48584	PPI
MS.gene021904	MS.gene004218	PPI
MS.gene99221	MS.gene021904	PPI
MS.gene03202	MS.gene021904	PPI
MS.gene021904	MS.gene016477	PPI
MS.gene021904	MS.gene021913	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene021904.t1	MTR_7g013850	89.278	485	46	5	1	481	1	483	0.0	863
MS.gene021904.t1	MTR_7g014200	61.925	478	162	10	5	477	6	468	0.0	564
MS.gene021904.t1	MTR_7g014160	58.787	478	182	10	5	477	6	473	0.0	548
MS.gene021904.t1	MTR_7g014610	60.124	484	177	11	1	477	1	475	0.0	535
MS.gene021904.t1	MTR_7g014620	55.195	462	168	10	20	477	6	432	8.37e-160	460
MS.gene021904.t1	MTR_7g014630	61.404	285	100	7	1	280	1	280	2.35e-113	339
MS.gene021904.t1	MTR_6g015315	39.362	470	261	8	9	477	6	452	1.18e-104	320
MS.gene021904.t1	MTR_6g015320	38.669	481	264	10	1	477	1	454	1.05e-102	315
MS.gene021904.t1	MTR_6g015850	40.082	489	249	15	1	477	1	457	1.48e-101	312
MS.gene021904.t1	MTR_7g014330	38.877	481	255	13	9	477	3	456	6.23e-101	310
MS.gene021904.t1	MTR_6g015830	40.373	483	243	14	9	477	9	460	7.07e-101	310
MS.gene021904.t1	MTR_7g014230	38.622	479	257	12	9	476	5	457	1.54e-100	309
MS.gene021904.t1	MTR_7g014250	37.630	481	261	12	9	477	3	456	2.61e-98	303
MS.gene021904.t1	MTR_6g015815	40.343	466	239	13	20	477	26	460	4.56e-98	303
MS.gene021904.t1	MTR_3g028210	34.356	489	284	12	1	477	1	464	3.22e-76	246
MS.gene021904.t1	MTR_7g014180	69.101	178	49	5	1	177	1	173	2.09e-73	229
MS.gene021904.t1	MTR_7g014670	58.421	190	77	2	289	477	71	259	3.59e-70	224
MS.gene021904.t1	MTR_7g014360	32.678	407	228	9	76	477	21	386	3.31e-69	226
MS.gene021904.t1	MTR_2g089765	32.587	491	278	16	11	477	21	482	8.43e-68	225
MS.gene021904.t1	MTR_2g089670	32.759	464	267	16	28	477	45	477	2.69e-59	202
MS.gene021904.t1	MTR_7g015860	30.661	499	274	15	4	473	1	456	6.04e-59	201
MS.gene021904.t1	MTR_2g089650	30.101	495	296	15	1	477	1	463	1.43e-58	200
MS.gene021904.t1	MTR_2g089755	30.323	465	283	11	28	477	37	475	3.84e-57	197
MS.gene021904.t1	MTR_2g089735	31.333	450	269	12	41	477	39	461	7.68e-57	196
MS.gene021904.t1	MTR_3g087640	30.000	490	301	13	9	480	10	475	9.18e-55	190
MS.gene021904.t1	MTR_8g012750	30.223	493	294	19	8	475	3	470	8.19e-54	188
MS.gene021904.t1	MTR_6g015310	30.534	393	202	8	63	455	12	333	3.10e-50	174
MS.gene021904.t1	MTR_7g014310	28.060	335	169	7	129	460	41	306	1.07e-36	137
MS.gene021904.t1	MTR_2g089665	26.652	454	192	15	11	450	7	333	3.32e-28	115
MS.gene021904.t1	MTR_3g435300	32.759	232	131	8	9	228	4	222	5.82e-25	104
MS.gene021904.t1	MTR_7g085930	24.033	491	317	17	8	477	6	461	1.06e-22	100
MS.gene021904.t1	MTR_4g007540	23.614	487	296	22	8	475	3	432	3.60e-21	96.3
MS.gene021904.t1	MTR_8g075610	23.559	399	238	16	44	429	30	374	2.88e-20	93.2
MS.gene021904.t1	MTR_2g064495	23.810	483	299	21	8	475	3	431	5.32e-20	92.4
MS.gene021904.t1	MTR_7g086000	23.214	448	277	16	7	429	3	408	1.67e-19	91.3
MS.gene021904.t1	MTR_2g105330	23.810	483	299	21	8	475	3	431	2.73e-19	90.5
MS.gene021904.t1	MTR_3g070170	25.109	458	264	19	8	433	12	422	3.23e-19	90.5
MS.gene021904.t1	MTR_7g085990	23.061	490	323	18	8	477	2	457	3.61e-19	90.5
MS.gene021904.t1	MTR_6g045553	23.725	510	292	23	3	470	11	465	4.15e-19	90.1
MS.gene021904.t1	MTR_8g096530	23.868	486	299	18	7	481	6	431	6.10e-17	83.6
MS.gene021904.t1	MTR_3g101960	23.419	427	253	15	28	433	29	402	3.19e-16	81.3
MS.gene021904.t1	MTR_3g049150	23.742	497	301	24	8	477	2	447	5.23e-16	80.5
MS.gene021904.t1	MTR_3g098980	22.667	375	226	13	67	429	66	388	7.47e-16	80.1
MS.gene021904.t1	MTR_4g094838	23.733	434	257	13	19	439	19	391	1.32e-15	79.3
MS.gene021904.t1	MTR_7g014205	32.258	124	72	2	317	439	2	114	2.54e-15	72.8
MS.gene021904.t1	MTR_7g014210	35.514	107	67	2	335	439	24	130	5.04e-15	73.2
MS.gene021904.t1	MTR_4g094842	22.654	437	249	16	62	467	57	435	8.05e-15	77.0
MS.gene021904.t1	MTR_8g467580	24.356	427	253	16	17	429	15	385	8.52e-15	76.6
MS.gene021904.t1	MTR_4g022825	23.009	452	288	19	28	467	24	427	1.54e-13	72.8
MS.gene021904.t1	MTR_4g022800	22.678	463	299	16	17	467	14	429	3.47e-13	71.6
MS.gene021904.t1	MTR_7g027175	21.226	424	275	13	61	474	62	436	4.24e-13	71.6
MS.gene021904.t1	MTR_4g127650	20.833	456	302	13	41	478	43	457	5.36e-13	71.2
MS.gene021904.t1	MTR_7g014340	54.930	71	25	2	9	75	3	70	6.84e-13	65.1
MS.gene021904.t1	MTR_7g084940	21.968	437	274	17	4	429	12	392	3.72e-12	68.6
MS.gene021904.t1	MTR_7g026860	23.729	472	282	18	16	467	12	425	9.35e-12	67.4
MS.gene021904.t1	MTR_7g014220	57.143	56	21	1	22	77	12	64	1.96e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene021904.t1	AT5G39080	39.496	476	257	14	8	474	5	458	1.16e-94	294
MS.gene021904.t1	AT3G29590	37.654	486	256	10	1	477	1	448	2.37e-93	290
MS.gene021904.t1	AT5G39050	38.980	490	255	15	4	477	6	467	3.03e-91	286
MS.gene021904.t1	AT5G39090	37.161	479	264	12	4	477	1	447	9.20e-89	278
MS.gene021904.t1	AT3G29635	36.268	477	272	11	8	477	3	454	2.13e-84	268
MS.gene021904.t1	AT3G29670	37.551	490	243	17	8	477	3	449	1.24e-83	265
MS.gene021904.t1	AT3G29680	35.430	477	258	13	8	473	6	443	2.93e-73	238
MS.gene021904.t1	AT5G61160	31.513	476	288	12	8	475	3	448	2.02e-69	228
MS.gene021904.t1	AT1G03940	31.515	495	280	15	9	480	9	467	2.31e-68	226
MS.gene021904.t1	AT1G03495	32.615	371	209	14	1	359	1	342	3.24e-44	159
MS.gene021904.t1	AT5G23940	25.667	487	285	21	8	467	3	439	1.22e-23	103
MS.gene021904.t1	AT5G48930	23.819	487	295	20	8	475	3	432	1.59e-21	97.1
MS.gene021904.t1	AT2G19070	22.737	453	292	14	41	475	37	449	4.97e-21	95.9
MS.gene021904.t1	AT3G29720	31.818	220	107	9	99	303	10	201	5.31e-18	83.2
MS.gene021904.t1	AT5G57840	23.188	483	311	16	8	477	3	438	5.39e-18	86.7
MS.gene021904.t1	AT5G41040	24.413	426	259	20	61	473	63	438	1.33e-16	82.4
MS.gene021904.t1	AT3G26040	24.779	452	252	15	38	470	37	419	2.17e-16	81.6
MS.gene021904.t1	AT5G67150	24.946	465	286	17	21	471	22	437	2.25e-16	81.6
MS.gene021904.t1	AT5G41040	24.413	426	259	20	61	473	79	454	2.49e-16	81.6
MS.gene021904.t1	AT3G29690	30.719	153	96	3	328	477	33	178	7.62e-15	73.2
MS.gene021904.t1	AT3G50280	23.113	424	272	15	19	433	18	396	1.61e-14	75.9
MS.gene021904.t1	AT3G50300	24.745	392	222	14	64	433	56	396	3.15e-13	72.0
MS.gene021904.t1	AT3G47170	23.421	380	232	11	18	388	40	369	7.58e-12	67.8
MS.gene021904.t1	AT4G29250	23.967	363	215	16	43	395	49	360	3.85e-11	65.5

Find 64 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATAGTTGGGTTGAAGAATT+AGG	0.162139	7.1:+81998768	None:intergenic
TCTAATAAAGGCTCTAAATT+TGG	0.169522	7.1:+81998225	None:intergenic
TGTTTCCTTCGATCAAATTT+TGG	0.183599	7.1:-81998475	MS.gene021904:CDS
TTGAAAGGTAGTATTGAATT+TGG	0.208629	7.1:-81997469	MS.gene021904:CDS
TTTGGATTGAATTGGATTAA+TGG	0.211797	7.1:+81998540	None:intergenic
TTGAATTGGATTAATGGTTT+TGG	0.231343	7.1:+81998546	None:intergenic
TTCAATATTGTTGTTCCATT+TGG	0.246981	7.1:+81997987	None:intergenic
GAGAGCGAAGATTTGAGTTT+TGG	0.251282	7.1:+81998627	None:intergenic
ACAAAAGTGGACAGCTTCTT+AGG	0.251396	7.1:+81997940	None:intergenic
CGTCATCATTTGGATTGAAT+TGG	0.258288	7.1:+81998532	None:intergenic
GGAGTATATGAGATTGATTT+TGG	0.276059	7.1:-81997568	MS.gene021904:CDS
ATGATTGGTGAAGGAGTTAA+AGG	0.329186	7.1:-81997619	MS.gene021904:CDS
AACGAATTCTCAAAATCATT+TGG	0.329734	7.1:+81998171	None:intergenic
GAGAAACTTTGCATTGTTCA+TGG	0.331192	7.1:+81998790	None:intergenic
ATTTGATGAAAATAAATAAC+AGG	0.346339	7.1:-81998017	MS.gene021904:CDS
CTTTAGCTGGTAACATCGTT+TGG	0.362068	7.1:-81998581	MS.gene021904:CDS
GTTAAAGGAATAGGAGTTGC+AGG	0.381644	7.1:-81997604	MS.gene021904:CDS
AATTGGTTTGACAGAAAGTA+AGG	0.387323	7.1:-81997494	MS.gene021904:CDS
AAGGAAACTCCGTCATCATT+TGG	0.395044	7.1:+81998522	None:intergenic
GGTGAAGGAGTTAAAGGAAT+AGG	0.395384	7.1:-81997613	MS.gene021904:CDS
TGCATTTCAACCAATCGTTA+AGG	0.404523	7.1:-81998076	MS.gene021904:CDS
TGTGAGAAGGAGAGATAGTT+GGG	0.418473	7.1:+81998755	None:intergenic
ACACACCATGCTGTTCTTGA+TGG	0.421878	7.1:-81998318	MS.gene021904:CDS
ATTGATAGAGGATTAACAAT+TGG	0.431776	7.1:-81997511	MS.gene021904:CDS
TAGAAGAAAATACGTTCTAC+TGG	0.445325	7.1:+81998702	None:intergenic
GTTGCAGGGTCAACAAGGTT+TGG	0.454958	7.1:-81997589	MS.gene021904:CDS
AGAATTCGTTCATTAATACT+TGG	0.456841	7.1:-81998158	MS.gene021904:CDS
GAGATTACTTCAATTGATAG+AGG	0.456941	7.1:-81997523	MS.gene021904:CDS
CAACACTTCCTCCCTTTAGC+TGG	0.464034	7.1:-81998594	MS.gene021904:CDS
CAGCTAAAGGGAGGAAGTGT+TGG	0.471757	7.1:+81998595	None:intergenic
ATGTGAGAAGGAGAGATAGT+TGG	0.473667	7.1:+81998754	None:intergenic
CAAAACAAAAGAGATGGATA+AGG	0.478383	7.1:-81997686	MS.gene021904:CDS
TATAGATATATAGCTATGAT+TGG	0.488633	7.1:-81997634	MS.gene021904:CDS
AGCACATGTAAGAACAAAAG+TGG	0.494080	7.1:+81997927	None:intergenic
ATAACAGGGTGTTATCCAAA+TGG	0.497827	7.1:-81998002	MS.gene021904:CDS
CAAACGATGTTACCAGCTAA+AGG	0.503485	7.1:+81998582	None:intergenic
TATGACTTTACAAAAGAAGA+TGG	0.504011	7.1:-81997739	MS.gene021904:CDS
AAAACAAAAGAGATGGATAA+GGG	0.505500	7.1:-81997685	MS.gene021904:CDS
GATCGCCTTTGCTATACAAA+CGG	0.514173	7.1:+81997897	None:intergenic
AAACGATGTTACCAGCTAAA+GGG	0.515290	7.1:+81998583	None:intergenic
TGGAACAACAATATTGAAGA+AGG	0.519341	7.1:-81997982	MS.gene021904:CDS
ACAGAAAGTAAGGATTTGAA+AGG	0.525092	7.1:-81997484	MS.gene021904:CDS
GTGCTCCAAAATTTGATCGA+AGG	0.536336	7.1:+81998470	None:intergenic
CGAACTGAATCCTTAACGAT+TGG	0.540576	7.1:+81998066	None:intergenic
GTAGGGTGTGAATGTGAACT+TGG	0.545769	7.1:+81998672	None:intergenic
TGTTCTTGATAAGCATGTGA+TGG	0.547164	7.1:-81997443	MS.gene021904:CDS
TGTTTCCGTTTGTATAGCAA+AGG	0.550669	7.1:-81997902	MS.gene021904:CDS
AATCTTGATCTGCAATCCAC+AGG	0.563131	7.1:+81997829	None:intergenic
TATATAGCTATGATTGGTGA+AGG	0.570710	7.1:-81997628	MS.gene021904:CDS
TTATGTCAAAACAAAAGAGA+TGG	0.571134	7.1:-81997692	MS.gene021904:CDS
GTGTGAATGTGAACTTGGGA+GGG	0.578151	7.1:+81998677	None:intergenic
GAATCTGATGATTCTAAGTG+TGG	0.592105	7.1:+81998408	None:intergenic
CAATTCAATCCAAATGATGA+CGG	0.601071	7.1:-81998531	MS.gene021904:CDS
GGTGTGAATGTGAACTTGGG+AGG	0.617310	7.1:+81998676	None:intergenic
GTCACATTGTGCTAAGAGCA+AGG	0.618079	7.1:+81998503	None:intergenic
TAGGAGTTGCAGGGTCAACA+AGG	0.619039	7.1:-81997594	MS.gene021904:CDS
CAACCATGTTCATCAAAGCA+TGG	0.631200	7.1:-81998287	MS.gene021904:CDS
ATGGTGTGTGCTTATTCCAA+TGG	0.644576	7.1:+81998332	None:intergenic
CGAGACAAAGAAGCTTCTTG+TGG	0.646679	7.1:+81998441	None:intergenic
TTTGATGAAAATAAATAACA+GGG	0.650830	7.1:-81998016	MS.gene021904:CDS
TAGGGTGTGAATGTGAACTT+GGG	0.653813	7.1:+81998673	None:intergenic
AGACCATGCTTTGATGAACA+TGG	0.653845	7.1:+81998284	None:intergenic
CGATGTTACCAGCTAAAGGG+AGG	0.666686	7.1:+81998586	None:intergenic
TTAAAGGAATAGGAGTTGCA+GGG	0.673383	7.1:-81997603	MS.gene021904:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTGATGAAAATAAATAAC+AGG	-	chr7.1:81998198-81998217	MS.gene021904:CDS	15.0%
!!	TTTGATGAAAATAAATAACA+GGG	-	chr7.1:81998199-81998218	MS.gene021904:CDS	15.0%
!!!	CAATTTCCAAAATAATTTTT+AGG	+	chr7.1:81998425-81998444	None:intergenic	15.0%
!!	TATAGATATATAGCTATGAT+TGG	-	chr7.1:81998581-81998600	MS.gene021904:CDS	20.0%
!!!	AAAAAGCAGAAATTTTCTTT+TGG	-	chr7.1:81998359-81998378	MS.gene021904:CDS	20.0%
!!!	AAATAATTTTTAGGAATTGG+TGG	+	chr7.1:81998416-81998435	None:intergenic	20.0%
!!!	AGATTTTCAAAGAAAAAAGT+AGG	+	chr7.1:81997564-81997583	None:intergenic	20.0%
!!!	CCAAAATAATTTTTAGGAAT+TGG	+	chr7.1:81998419-81998438	None:intergenic	20.0%
!!!	CCAATTCCTAAAAATTATTT+TGG	-	chr7.1:81998416-81998435	MS.gene021904:CDS	20.0%
!!!	GATTTTCAAAGAAAAAAGTA+GGG	+	chr7.1:81997563-81997582	None:intergenic	20.0%
!	AAAACAAAAGAGATGGATAA+GGG	-	chr7.1:81998530-81998549	MS.gene021904:CDS	25.0%
!	AACGAATTCTCAAAATCATT+TGG	+	chr7.1:81998047-81998066	None:intergenic	25.0%
!	AGAATTCGTTCATTAATACT+TGG	-	chr7.1:81998057-81998076	MS.gene021904:CDS	25.0%
!	ATTGATAGAGGATTAACAAT+TGG	-	chr7.1:81998704-81998723	MS.gene021904:CDS	25.0%
!	TAATAACCCTTCATGAAAAA+TGG	+	chr7.1:81998810-81998829	None:intergenic	25.0%
!	TATGACTTTACAAAAGAAGA+TGG	-	chr7.1:81998476-81998495	MS.gene021904:CDS	25.0%
!	TTATGTCAAAACAAAAGAGA+TGG	-	chr7.1:81998523-81998542	MS.gene021904:CDS	25.0%
!	TTTGGATTGAATTGGATTAA+TGG	+	chr7.1:81997678-81997697	None:intergenic	25.0%
!!	TCTTCTTTTGTAAAGTCATA+TGG	+	chr7.1:81998476-81998495	None:intergenic	25.0%
!!	TGAATTGGATTAATGGTTTT+GGG	+	chr7.1:81997671-81997690	None:intergenic	25.0%
!!	TTCAATATTGTTGTTCCATT+TGG	+	chr7.1:81998231-81998250	None:intergenic	25.0%
!!	TTGAAAGGTAGTATTGAATT+TGG	-	chr7.1:81998746-81998765	MS.gene021904:CDS	25.0%
!!	TTGAATTGGATTAATGGTTT+TGG	+	chr7.1:81997672-81997691	None:intergenic	25.0%
!!!	AAAAACCATTTTTCGGAAAA+AGG	+	chr7.1:81997863-81997882	None:intergenic	25.0%
!!!	AAAACCATTTTTCGGAAAAA+GGG	+	chr7.1:81997862-81997881	None:intergenic	25.0%
!!!	ATTAGAACCATTTTTGGAAA+GGG	-	chr7.1:81998007-81998026	MS.gene021904:CDS	25.0%
!!!	TATGAGATTGATTTTGGTTT+TGG	-	chr7.1:81998653-81998672	MS.gene021904:CDS	25.0%
!!!	TATTAGAACCATTTTTGGAA+AGG	-	chr7.1:81998006-81998025	MS.gene021904:CDS	25.0%
!!!	TCACATTTTTTGACTTGATT+TGG	-	chr7.1:81997478-81997497	MS.gene021904:CDS	25.0%
!!!	TCCAAAAATGGTTCTAATAA+AGG	+	chr7.1:81998005-81998024	None:intergenic	25.0%
!!!	TCTAATAAAGGCTCTAAATT+TGG	+	chr7.1:81997993-81998012	None:intergenic	25.0%
!!!	TTCAAACCATTTTTCATGAA+GGG	-	chr7.1:81998801-81998820	MS.gene021904:CDS	25.0%
!!!	TTTCAAACCATTTTTCATGA+AGG	-	chr7.1:81998800-81998819	MS.gene021904:CDS	25.0%
	ACAGAAAGTAAGGATTTGAA+AGG	-	chr7.1:81998731-81998750	MS.gene021904:CDS	30.0%
	CAAAACAAAAGAGATGGATA+AGG	-	chr7.1:81998529-81998548	MS.gene021904:CDS	30.0%
	CAATTCAATCCAAATGATGA+CGG	-	chr7.1:81997684-81997703	MS.gene021904:CDS	30.0%
	GAGATTACTTCAATTGATAG+AGG	-	chr7.1:81998692-81998711	MS.gene021904:CDS	30.0%
	TAGAAGAAAATACGTTCTAC+TGG	+	chr7.1:81997516-81997535	None:intergenic	30.0%
	TATATAGCTATGATTGGTGA+AGG	-	chr7.1:81998587-81998606	MS.gene021904:CDS	30.0%
	TCAAGTCAAAAAATGTGAGA+AGG	+	chr7.1:81997476-81997495	None:intergenic	30.0%
	TGGAACAACAATATTGAAGA+AGG	-	chr7.1:81998233-81998252	MS.gene021904:CDS	30.0%
!	ATAACCCTTTTTCCGAAAAA+TGG	-	chr7.1:81997855-81997874	MS.gene021904:CDS	30.0%
!	GCCTTTATTAGAACCATTTT+TGG	-	chr7.1:81998001-81998020	MS.gene021904:CDS	30.0%
!	TGTTTCCTTCGATCAAATTT+TGG	-	chr7.1:81997740-81997759	MS.gene021904:CDS	30.0%
!!	AATTGGTTTGACAGAAAGTA+AGG	-	chr7.1:81998721-81998740	MS.gene021904:CDS	30.0%
!!	CCAATGGAAAAACCATTTTT+CGG	+	chr7.1:81997870-81997889	None:intergenic	30.0%
!!	GAATTGGATTAATGGTTTTG+GGG	+	chr7.1:81997670-81997689	None:intergenic	30.0%
!!	GGAGTATATGAGATTGATTT+TGG	-	chr7.1:81998647-81998666	MS.gene021904:CDS	30.0%
!!!	AGATTGATTTTGGTTTTGGA+AGG	-	chr7.1:81998657-81998676	MS.gene021904:CDS	30.0%
!!!	ATTTTCTTTTGGTTTTCCTG+TGG	-	chr7.1:81998370-81998389	MS.gene021904:CDS	30.0%
!!!	TTTCTGCTTTTTATCGCTTT+CGG	+	chr7.1:81998351-81998370	None:intergenic	30.0%
	AAACGATGTTACCAGCTAAA+GGG	+	chr7.1:81997635-81997654	None:intergenic	35.0%
	AGCACATGTAAGAACAAAAG+TGG	+	chr7.1:81998291-81998310	None:intergenic	35.0%
	ATGACTTCCCTTTCCAAAAA+TGG	+	chr7.1:81998017-81998036	None:intergenic	35.0%
	ATGATTGGTGAAGGAGTTAA+AGG	-	chr7.1:81998596-81998615	MS.gene021904:CDS	35.0%
	CGTCATCATTTGGATTGAAT+TGG	+	chr7.1:81997686-81997705	None:intergenic	35.0%
	GAATCTGATGATTCTAAGTG+TGG	+	chr7.1:81997810-81997829	None:intergenic	35.0%
	GAGAAACTTTGCATTGTTCA+TGG	+	chr7.1:81997428-81997447	None:intergenic	35.0%
	TGCATTTCAACCAATCGTTA+AGG	-	chr7.1:81998139-81998158	MS.gene021904:CDS	35.0%
	TGTTCTTGATAAGCATGTGA+TGG	-	chr7.1:81998772-81998791	MS.gene021904:CDS	35.0%
	TGTTTCCGTTTGTATAGCAA+AGG	-	chr7.1:81998313-81998332	MS.gene021904:CDS	35.0%
	TTAAAGGAATAGGAGTTGCA+GGG	-	chr7.1:81998612-81998631	MS.gene021904:CDS	35.0%
!	ATAACAGGGTGTTATCCAAA+TGG	-	chr7.1:81998213-81998232	MS.gene021904:CDS	35.0%
!	ATGGATAAGGGTTTTCTTGA+TGG	-	chr7.1:81998542-81998561	MS.gene021904:CDS	35.0%
!	ATTTTCCATCAAGAACAGCA+TGG	+	chr7.1:81997905-81997924	None:intergenic	35.0%
!	CCGAAAAATGGTTTTTCCAT+TGG	-	chr7.1:81997867-81997886	MS.gene021904:CDS	35.0%
!	TTTTATCGCTTTCGGATTGT+TGG	+	chr7.1:81998343-81998362	None:intergenic	35.0%
!!	GATAGTTGGGTTGAAGAATT+AGG	+	chr7.1:81997450-81997469	None:intergenic	35.0%
	AAGGAAACTCCGTCATCATT+TGG	+	chr7.1:81997696-81997715	None:intergenic	40.0%
	AATCTTGATCTGCAATCCAC+AGG	+	chr7.1:81998389-81998408	None:intergenic	40.0%
	ACAAAAGTGGACAGCTTCTT+AGG	+	chr7.1:81998278-81998297	None:intergenic	40.0%
	AGACCATGCTTTGATGAACA+TGG	+	chr7.1:81997934-81997953	None:intergenic	40.0%
	ATGGTGTGTGCTTATTCCAA+TGG	+	chr7.1:81997886-81997905	None:intergenic	40.0%
	ATGTGAGAAGGAGAGATAGT+TGG	+	chr7.1:81997464-81997483	None:intergenic	40.0%
	CAAACGATGTTACCAGCTAA+AGG	+	chr7.1:81997636-81997655	None:intergenic	40.0%
	CAACCATGTTCATCAAAGCA+TGG	-	chr7.1:81997928-81997947	MS.gene021904:CDS	40.0%
	CGAACTGAATCCTTAACGAT+TGG	+	chr7.1:81998152-81998171	None:intergenic	40.0%
	CTTTAGCTGGTAACATCGTT+TGG	-	chr7.1:81997634-81997653	MS.gene021904:CDS	40.0%
	GGTGAAGGAGTTAAAGGAAT+AGG	-	chr7.1:81998602-81998621	MS.gene021904:CDS	40.0%
	GTGCTCCAAAATTTGATCGA+AGG	+	chr7.1:81997748-81997767	None:intergenic	40.0%
	GTTAAAGGAATAGGAGTTGC+AGG	-	chr7.1:81998611-81998630	MS.gene021904:CDS	40.0%
	TAGGGTGTGAATGTGAACTT+GGG	+	chr7.1:81997545-81997564	None:intergenic	40.0%
	TGTGAGAAGGAGAGATAGTT+GGG	+	chr7.1:81997463-81997482	None:intergenic	40.0%
!	GATCGCCTTTGCTATACAAA+CGG	+	chr7.1:81998321-81998340	None:intergenic	40.0%
!!	GAAGTAATCTCCACTTTTGC+AGG	+	chr7.1:81998683-81998702	None:intergenic	40.0%
!!	GAGAGCGAAGATTTGAGTTT+TGG	+	chr7.1:81997591-81997610	None:intergenic	40.0%
!!!	AATGGTTTTGGGGAATCAGA+AGG	+	chr7.1:81997660-81997679	None:intergenic	40.0%
	ACACACCATGCTGTTCTTGA+TGG	-	chr7.1:81997897-81997916	MS.gene021904:CDS	45.0%
	CGAGACAAAGAAGCTTCTTG+TGG	+	chr7.1:81997777-81997796	None:intergenic	45.0%
	GTAGGGTGTGAATGTGAACT+TGG	+	chr7.1:81997546-81997565	None:intergenic	45.0%
	GTCACATTGTGCTAAGAGCA+AGG	+	chr7.1:81997715-81997734	None:intergenic	45.0%
	GTGTGAATGTGAACTTGGGA+GGG	+	chr7.1:81997541-81997560	None:intergenic	45.0%
!!	TTTTGGAAGGCCTGCAAAAG+TGG	-	chr7.1:81998670-81998689	MS.gene021904:CDS	45.0%
	CAACACTTCCTCCCTTTAGC+TGG	-	chr7.1:81997621-81997640	MS.gene021904:CDS	50.0%
	CGATGTTACCAGCTAAAGGG+AGG	+	chr7.1:81997632-81997651	None:intergenic	50.0%
	GGTGTGAATGTGAACTTGGG+AGG	+	chr7.1:81997542-81997561	None:intergenic	50.0%
	GTTGCAGGGTCAACAAGGTT+TGG	-	chr7.1:81998626-81998645	MS.gene021904:CDS	50.0%
	TAGGAGTTGCAGGGTCAACA+AGG	-	chr7.1:81998621-81998640	MS.gene021904:CDS	50.0%
!	CAGCTAAAGGGAGGAAGTGT+TGG	+	chr7.1:81997623-81997642	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.1	gene	81997396	81998841	81997396	ID=MS.gene021904
chr7.1	mRNA	81997396	81998841	81997396	ID=MS.gene021904.t1;Parent=MS.gene021904
chr7.1	exon	81997396	81998841	81997396	ID=MS.gene021904.t1.exon1;Parent=MS.gene021904.t1
chr7.1	CDS	81997396	81998841	81997396	ID=cds.MS.gene021904.t1;Parent=MS.gene021904.t1

Gene Sequence

>MS.gene021904

ATGGCTTCTCTAAACAAACACATCAAAATCCATGAACAATGCAAAGTTTCTCCTAATTCTTCAACCCAACTATCTCTCCTTCTCACATTTTTTGACTTGATTTGGCTAAGATTTCATCCAGTAGAACGTATTTTCTTCTACACCCTCCCAAGTTCACATTCACACCCTACTTTTTTCTTTGAAAATCTTGTTCCAAAACTCAAATCTTCGCTCTCTTTAACTCTCCAACACTTCCTCCCTTTAGCTGGTAACATCGTTTGGCCTTCTGATTCCCCAAAACCATTAATCCAATTCAATCCAAATGATGACGGAGTTTCCTTGCTCTTAGCACAATGTGACGATGATGTTTCCTTCGATCAAATTTTGGAGCACAATTCACCACAAGAAGCTTCTTTGTCTCGTTCTTTTGTACCACACTTAGAATCATCAGATTCTTTTGCTTCTATTATTTCAATTCAGATAACCCTTTTTCCGAAAAATGGTTTTTCCATTGGAATAAGCACACACCATGCTGTTCTTGATGGAAAATCTTCAACCATGTTCATCAAAGCATGGTCTTCTATGTGTAAATCTCTTGAAGAAGAAACACAATCACCAAATTTAGAGCCTTTATTAGAACCATTTTTGGAAAGGGAAGTCATCAAAGATCCAAATGATTTTGAGAATTCGTTCATTAATACTTGGAACAGTATCTCATCACATTTTGATAAGAGCAATGTGAGAAGCATACAAATTATGTCAAATGCATTTCAACCAATCGTTAAGGATTCAGTTCGAGTAACTTTCGAGCTAACACGCGAAGATTTGATGAAAATAAATAACAGGGTGTTATCCAAATGGAACAACAATATTGAAGAAGGATCACAAGAACAAGAACAACCTAAGAAGCTGTCCACTTTTGTTCTTACATGTGCTTATGTTTCCGTTTGTATAGCAAAGGCGATCCAACAATCCGAAAGCGATAAAAAGCAGAAATTTTCTTTTGGTTTTCCTGTGGATTGCAGATCAAGATTTGATCCACCAATTCCTAAAAATTATTTTGGAAATTGTGTATCTAATCATATAATTGATACTGAGCCATATGACTTTACAAAAGAAGATGGAGTTGTGATTGTTGCTAAGAAAATTTATGTCAAAACAAAAGAGATGGATAAGGGTTTTCTTGATGGAATAGAGACATTGACGTATAGATATATAGCTATGATTGGTGAAGGAGTTAAAGGAATAGGAGTTGCAGGGTCAACAAGGTTTGGAGTATATGAGATTGATTTTGGTTTTGGAAGGCCTGCAAAAGTGGAGATTACTTCAATTGATAGAGGATTAACAATTGGTTTGACAGAAAGTAAGGATTTGAAAGGTAGTATTGAATTTGGACTTGTTCTTGATAAGCATGTGATGGATTTGTTTCAAACCATTTTTCATGAAGGGTTATTATGTTTTGATTGA

Protein sequence

>MS.gene021904.t1

MASLNKHIKIHEQCKVSPNSSTQLSLLLTFFDLIWLRFHPVERIFFYTLPSSHSHPTFFFENLVPKLKSSLSLTLQHFLPLAGNIVWPSDSPKPLIQFNPNDDGVSLLLAQCDDDVSFDQILEHNSPQEASLSRSFVPHLESSDSFASIISIQITLFPKNGFSIGISTHHAVLDGKSSTMFIKAWSSMCKSLEEETQSPNLEPLLEPFLEREVIKDPNDFENSFINTWNSISSHFDKSNVRSIQIMSNAFQPIVKDSVRVTFELTREDLMKINNRVLSKWNNNIEEGSQEQEQPKKLSTFVLTCAYVSVCIAKAIQQSESDKKQKFSFGFPVDCRSRFDPPIPKNYFGNCVSNHIIDTEPYDFTKEDGVVIVAKKIYVKTKEMDKGFLDGIETLTYRYIAMIGEGVKGIGVAGSTRFGVYEIDFGFGRPAKVEITSIDRGLTIGLTESKDLKGSIEFGLVLDKHVMDLFQTIFHEGLLCFD