Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91597.t1 | XP_003621460.2 | 82.7 | 479 | 80 | 3 | 1 | 479 | 1 | 476 | 6.40E-227 | 796.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91597.t1 | Q940Z5 | 40.2 | 478 | 262 | 15 | 6 | 476 | 7 | 467 | 1.2e-88 | 328.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91597.t1 | G7L650 | 82.7 | 479 | 80 | 3 | 1 | 479 | 1 | 476 | 4.6e-227 | 796.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049232 | MS.gene91597 | 0.868052 | 8.69E-66 | -1.69E-46 |
MS.gene049396 | MS.gene91597 | 0.831294 | 1.81E-55 | -1.69E-46 |
MS.gene050170 | MS.gene91597 | 0.838013 | 3.70E-57 | -1.69E-46 |
MS.gene050216 | MS.gene91597 | 0.806331 | 8.66E-50 | -1.69E-46 |
MS.gene050323 | MS.gene91597 | 0.868209 | 7.74E-66 | -1.69E-46 |
MS.gene050496 | MS.gene91597 | 0.814468 | 1.52E-51 | -1.69E-46 |
MS.gene050502 | MS.gene91597 | 0.804788 | 1.83E-49 | -1.69E-46 |
MS.gene050697 | MS.gene91597 | 0.836351 | 9.84E-57 | -1.69E-46 |
MS.gene050868 | MS.gene91597 | 0.837915 | 3.92E-57 | -1.69E-46 |
MS.gene050871 | MS.gene91597 | 0.839695 | 1.36E-57 | -1.69E-46 |
MS.gene051268 | MS.gene91597 | 0.808283 | 3.34E-50 | -1.69E-46 |
MS.gene052066 | MS.gene91597 | 0.844868 | 5.79E-59 | -1.69E-46 |
MS.gene052822 | MS.gene91597 | 0.802425 | 5.65E-49 | -1.69E-46 |
MS.gene052966 | MS.gene91597 | 0.813107 | 3.03E-51 | -1.69E-46 |
MS.gene053162 | MS.gene91597 | 0.81182 | 5.78E-51 | -1.69E-46 |
MS.gene053505 | MS.gene91597 | 0.815123 | 1.09E-51 | -1.69E-46 |
MS.gene053633 | MS.gene91597 | 0.883231 | 5.34E-71 | -1.69E-46 |
MS.gene054003 | MS.gene91597 | 0.815373 | 9.56E-52 | -1.69E-46 |
MS.gene054564 | MS.gene91597 | 0.801863 | 7.37E-49 | -1.69E-46 |
MS.gene054595 | MS.gene91597 | 0.808349 | 3.24E-50 | -1.69E-46 |
MS.gene05589 | MS.gene91597 | 0.80258 | 5.25E-49 | -1.69E-46 |
MS.gene056046 | MS.gene91597 | 0.845245 | 4.58E-59 | -1.69E-46 |
MS.gene056166 | MS.gene91597 | 0.802978 | 4.34E-49 | -1.69E-46 |
MS.gene056387 | MS.gene91597 | 0.858608 | 7.33E-63 | -1.69E-46 |
MS.gene056504 | MS.gene91597 | 0.829934 | 3.90E-55 | -1.69E-46 |
MS.gene056510 | MS.gene91597 | 0.807634 | 4.59E-50 | -1.69E-46 |
MS.gene056618 | MS.gene91597 | -0.837789 | 4.23E-57 | -1.69E-46 |
MS.gene057086 | MS.gene91597 | 0.80454 | 2.06E-49 | -1.69E-46 |
MS.gene057173 | MS.gene91597 | -0.804986 | 1.66E-49 | -1.69E-46 |
MS.gene05787 | MS.gene91597 | 0.837183 | 6.04E-57 | -1.69E-46 |
MS.gene059305 | MS.gene91597 | 0.808181 | 3.51E-50 | -1.69E-46 |
MS.gene059367 | MS.gene91597 | 0.804776 | 1.84E-49 | -1.69E-46 |
MS.gene059703 | MS.gene91597 | -0.803719 | 3.05E-49 | -1.69E-46 |
MS.gene059865 | MS.gene91597 | 0.820334 | 7.25E-53 | -1.69E-46 |
MS.gene05995 | MS.gene91597 | 0.821368 | 4.19E-53 | -1.69E-46 |
MS.gene06000 | MS.gene91597 | 0.836743 | 7.82E-57 | -1.69E-46 |
MS.gene060778 | MS.gene91597 | 0.829833 | 4.12E-55 | -1.69E-46 |
MS.gene06097 | MS.gene91597 | 0.830634 | 2.63E-55 | -1.69E-46 |
MS.gene060982 | MS.gene91597 | 0.835393 | 1.72E-56 | -1.69E-46 |
MS.gene061218 | MS.gene91597 | 0.85301 | 3.17E-61 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91597.t1 | MTR_7g014160 | 82.672 | 479 | 80 | 3 | 1 | 479 | 1 | 476 | 0.0 | 806 |
MS.gene91597.t1 | MTR_7g014610 | 76.827 | 479 | 107 | 4 | 3 | 479 | 2 | 478 | 0.0 | 741 |
MS.gene91597.t1 | MTR_7g014200 | 74.375 | 480 | 113 | 4 | 1 | 479 | 1 | 471 | 0.0 | 729 |
MS.gene91597.t1 | MTR_7g014620 | 67.462 | 461 | 117 | 5 | 21 | 479 | 6 | 435 | 0.0 | 600 |
MS.gene91597.t1 | MTR_7g014630 | 89.667 | 300 | 30 | 1 | 1 | 300 | 1 | 299 | 0.0 | 553 |
MS.gene91597.t1 | MTR_7g013850 | 58.197 | 488 | 184 | 12 | 1 | 476 | 1 | 480 | 0.0 | 536 |
MS.gene91597.t1 | MTR_7g014670 | 95.699 | 186 | 8 | 0 | 294 | 479 | 77 | 262 | 2.93e-127 | 370 |
MS.gene91597.t1 | MTR_7g014230 | 41.545 | 479 | 253 | 12 | 7 | 478 | 2 | 460 | 8.53e-115 | 346 |
MS.gene91597.t1 | MTR_7g014330 | 40.421 | 475 | 254 | 12 | 10 | 476 | 3 | 456 | 4.47e-110 | 333 |
MS.gene91597.t1 | MTR_6g015815 | 41.304 | 460 | 247 | 10 | 19 | 476 | 22 | 460 | 8.56e-110 | 333 |
MS.gene91597.t1 | MTR_7g014250 | 40.252 | 477 | 252 | 13 | 10 | 476 | 3 | 456 | 1.58e-106 | 325 |
MS.gene91597.t1 | MTR_6g015320 | 41.667 | 480 | 239 | 18 | 7 | 476 | 6 | 454 | 8.27e-106 | 323 |
MS.gene91597.t1 | MTR_6g015830 | 39.446 | 469 | 257 | 12 | 11 | 476 | 16 | 460 | 1.10e-105 | 323 |
MS.gene91597.t1 | MTR_6g015850 | 39.623 | 477 | 250 | 13 | 10 | 476 | 9 | 457 | 4.01e-105 | 321 |
MS.gene91597.t1 | MTR_6g015315 | 40.725 | 469 | 254 | 12 | 10 | 476 | 6 | 452 | 2.35e-104 | 319 |
MS.gene91597.t1 | MTR_3g028210 | 36.952 | 479 | 269 | 12 | 9 | 476 | 8 | 464 | 1.35e-85 | 271 |
MS.gene91597.t1 | MTR_7g014180 | 77.326 | 172 | 37 | 2 | 6 | 177 | 4 | 173 | 1.51e-85 | 261 |
MS.gene91597.t1 | MTR_2g089765 | 34.337 | 498 | 272 | 16 | 6 | 476 | 13 | 482 | 1.35e-77 | 251 |
MS.gene91597.t1 | MTR_7g014360 | 35.452 | 409 | 210 | 11 | 79 | 476 | 21 | 386 | 1.72e-76 | 245 |
MS.gene91597.t1 | MTR_8g012750 | 32.136 | 501 | 280 | 13 | 1 | 474 | 3 | 470 | 8.15e-70 | 230 |
MS.gene91597.t1 | MTR_3g087640 | 33.469 | 490 | 280 | 16 | 10 | 478 | 10 | 474 | 7.41e-68 | 225 |
MS.gene91597.t1 | MTR_2g089670 | 32.397 | 463 | 274 | 12 | 27 | 476 | 41 | 477 | 8.90e-67 | 222 |
MS.gene91597.t1 | MTR_7g015860 | 31.303 | 476 | 271 | 14 | 9 | 462 | 5 | 446 | 9.78e-64 | 214 |
MS.gene91597.t1 | MTR_2g089735 | 33.703 | 451 | 255 | 15 | 44 | 477 | 39 | 462 | 2.03e-63 | 213 |
MS.gene91597.t1 | MTR_2g089650 | 32.258 | 496 | 283 | 19 | 1 | 476 | 1 | 463 | 7.72e-58 | 198 |
MS.gene91597.t1 | MTR_2g089755 | 32.833 | 466 | 268 | 16 | 31 | 477 | 37 | 476 | 1.12e-57 | 198 |
MS.gene91597.t1 | MTR_6g015310 | 34.243 | 403 | 192 | 15 | 54 | 454 | 2 | 333 | 1.16e-57 | 194 |
MS.gene91597.t1 | MTR_2g089665 | 28.256 | 453 | 194 | 16 | 9 | 450 | 2 | 334 | 1.95e-39 | 146 |
MS.gene91597.t1 | MTR_7g014310 | 29.240 | 342 | 175 | 8 | 119 | 459 | 31 | 306 | 8.76e-39 | 143 |
MS.gene91597.t1 | MTR_3g435300 | 34.842 | 221 | 121 | 7 | 20 | 228 | 13 | 222 | 8.40e-32 | 123 |
MS.gene91597.t1 | MTR_4g127650 | 25.054 | 459 | 273 | 15 | 44 | 476 | 43 | 456 | 2.58e-22 | 99.8 |
MS.gene91597.t1 | MTR_8g079950 | 25.322 | 466 | 286 | 15 | 12 | 468 | 8 | 420 | 9.69e-22 | 97.8 |
MS.gene91597.t1 | MTR_5g081960 | 23.760 | 484 | 314 | 16 | 20 | 465 | 6 | 472 | 1.10e-21 | 98.2 |
MS.gene91597.t1 | MTR_3g070170 | 26.132 | 486 | 301 | 20 | 3 | 465 | 6 | 456 | 3.88e-21 | 96.3 |
MS.gene91597.t1 | MTR_7g086000 | 23.944 | 497 | 312 | 17 | 8 | 478 | 3 | 459 | 4.97e-21 | 95.9 |
MS.gene91597.t1 | MTR_2g064495 | 23.556 | 450 | 288 | 19 | 35 | 474 | 28 | 431 | 9.03e-21 | 94.7 |
MS.gene91597.t1 | MTR_2g105330 | 24.109 | 477 | 303 | 21 | 9 | 474 | 3 | 431 | 9.82e-21 | 94.7 |
MS.gene91597.t1 | MTR_3g026950 | 25.346 | 434 | 263 | 20 | 65 | 472 | 49 | 447 | 2.00e-20 | 94.0 |
MS.gene91597.t1 | MTR_6g045553 | 26.210 | 496 | 287 | 22 | 5 | 465 | 10 | 461 | 2.79e-20 | 93.6 |
MS.gene91597.t1 | MTR_5g084870 | 25.532 | 470 | 282 | 20 | 12 | 472 | 8 | 418 | 4.75e-20 | 92.8 |
MS.gene91597.t1 | MTR_3g049150 | 25.296 | 506 | 282 | 23 | 9 | 477 | 2 | 448 | 8.24e-19 | 89.4 |
MS.gene91597.t1 | MTR_8g075610 | 23.756 | 442 | 271 | 18 | 47 | 474 | 30 | 419 | 1.15e-18 | 88.6 |
MS.gene91597.t1 | MTR_4g007540 | 25.000 | 488 | 286 | 26 | 9 | 474 | 3 | 432 | 1.76e-18 | 87.8 |
MS.gene91597.t1 | MTR_4g097090 | 25.427 | 468 | 288 | 17 | 30 | 476 | 29 | 456 | 2.70e-18 | 87.4 |
MS.gene91597.t1 | MTR_8g467580 | 24.167 | 480 | 283 | 21 | 8 | 466 | 4 | 423 | 4.31e-17 | 84.0 |
MS.gene91597.t1 | MTR_4g094828 | 23.684 | 456 | 281 | 18 | 27 | 461 | 25 | 434 | 6.68e-17 | 83.2 |
MS.gene91597.t1 | MTR_3g098980 | 23.188 | 483 | 306 | 16 | 1 | 473 | 6 | 433 | 1.18e-16 | 82.4 |
MS.gene91597.t1 | MTR_3g101960 | 24.289 | 457 | 275 | 18 | 31 | 465 | 29 | 436 | 2.61e-16 | 81.6 |
MS.gene91597.t1 | MTR_4g022720 | 24.578 | 415 | 234 | 15 | 70 | 458 | 55 | 416 | 2.11e-15 | 78.6 |
MS.gene91597.t1 | MTR_8g096530 | 21.987 | 473 | 307 | 15 | 5 | 468 | 3 | 422 | 2.19e-15 | 78.6 |
MS.gene91597.t1 | MTR_3g026310 | 25.272 | 459 | 282 | 19 | 18 | 458 | 14 | 429 | 2.87e-15 | 78.2 |
MS.gene91597.t1 | MTR_4g022290 | 22.198 | 455 | 283 | 14 | 31 | 466 | 30 | 432 | 5.24e-15 | 77.4 |
MS.gene91597.t1 | MTR_7g014205 | 34.426 | 122 | 67 | 3 | 318 | 438 | 5 | 114 | 1.12e-14 | 70.9 |
MS.gene91597.t1 | MTR_7g027175 | 21.770 | 418 | 264 | 14 | 69 | 472 | 67 | 435 | 1.76e-14 | 75.9 |
MS.gene91597.t1 | MTR_2g015430 | 22.016 | 486 | 296 | 20 | 9 | 468 | 2 | 430 | 6.62e-14 | 73.9 |
MS.gene91597.t1 | MTR_4g022800 | 24.059 | 478 | 284 | 16 | 18 | 467 | 14 | 440 | 2.90e-13 | 72.0 |
MS.gene91597.t1 | MTR_8g079980 | 23.478 | 460 | 270 | 15 | 12 | 452 | 8 | 404 | 1.94e-12 | 69.3 |
MS.gene91597.t1 | MTR_7g026860 | 24.578 | 415 | 237 | 13 | 70 | 458 | 55 | 419 | 2.32e-12 | 69.3 |
MS.gene91597.t1 | MTR_7g014340 | 52.113 | 71 | 29 | 2 | 10 | 78 | 3 | 70 | 5.58e-12 | 62.4 |
MS.gene91597.t1 | MTR_7g014220 | 57.407 | 54 | 20 | 1 | 27 | 80 | 14 | 64 | 1.09e-11 | 61.2 |
MS.gene91597.t1 | MTR_3g435290 | 45.588 | 68 | 35 | 1 | 410 | 477 | 53 | 118 | 4.53e-11 | 60.5 |
MS.gene91597.t1 | MTR_4g094842 | 25.059 | 423 | 242 | 15 | 70 | 466 | 62 | 435 | 4.72e-11 | 65.1 |
MS.gene91597.t1 | MTR_1g053315 | 21.772 | 395 | 253 | 15 | 47 | 428 | 58 | 409 | 8.92e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91597.t1 | AT5G39050 | 40.084 | 479 | 263 | 15 | 6 | 477 | 7 | 468 | 2.58e-99 | 306 |
MS.gene91597.t1 | AT5G39080 | 38.462 | 468 | 261 | 15 | 7 | 466 | 3 | 451 | 3.74e-98 | 303 |
MS.gene91597.t1 | AT3G29670 | 38.803 | 451 | 245 | 10 | 30 | 477 | 28 | 450 | 1.37e-95 | 296 |
MS.gene91597.t1 | AT3G29590 | 37.945 | 477 | 257 | 11 | 7 | 477 | 6 | 449 | 3.68e-95 | 295 |
MS.gene91597.t1 | AT3G29635 | 36.444 | 450 | 264 | 9 | 30 | 478 | 28 | 456 | 4.54e-89 | 280 |
MS.gene91597.t1 | AT5G39090 | 36.188 | 467 | 261 | 15 | 16 | 476 | 12 | 447 | 1.02e-86 | 273 |
MS.gene91597.t1 | AT5G61160 | 31.478 | 467 | 294 | 8 | 9 | 472 | 3 | 446 | 5.15e-76 | 246 |
MS.gene91597.t1 | AT3G29680 | 33.775 | 453 | 269 | 11 | 30 | 478 | 24 | 449 | 8.14e-75 | 243 |
MS.gene91597.t1 | AT1G03940 | 32.121 | 495 | 269 | 15 | 10 | 476 | 9 | 464 | 1.36e-71 | 234 |
MS.gene91597.t1 | AT1G03495 | 32.055 | 365 | 198 | 12 | 11 | 357 | 10 | 342 | 5.34e-46 | 164 |
MS.gene91597.t1 | AT5G23940 | 26.514 | 479 | 293 | 24 | 6 | 466 | 2 | 439 | 6.93e-24 | 104 |
MS.gene91597.t1 | AT5G41040 | 24.057 | 424 | 263 | 18 | 64 | 474 | 63 | 440 | 2.76e-22 | 99.8 |
MS.gene91597.t1 | AT5G41040 | 24.057 | 424 | 263 | 18 | 64 | 474 | 79 | 456 | 3.71e-22 | 99.4 |
MS.gene91597.t1 | AT5G57840 | 24.593 | 492 | 297 | 22 | 9 | 479 | 3 | 441 | 1.12e-19 | 91.7 |
MS.gene91597.t1 | AT5G67150 | 24.945 | 457 | 278 | 15 | 31 | 470 | 29 | 437 | 2.21e-18 | 87.8 |
MS.gene91597.t1 | AT2G39980 | 25.407 | 492 | 314 | 21 | 1 | 465 | 1 | 466 | 2.55e-18 | 87.8 |
MS.gene91597.t1 | AT5G23970 | 24.026 | 462 | 276 | 15 | 16 | 465 | 9 | 407 | 2.83e-18 | 87.4 |
MS.gene91597.t1 | AT3G29720 | 30.102 | 196 | 116 | 6 | 108 | 302 | 26 | 201 | 9.38e-18 | 82.4 |
MS.gene91597.t1 | AT3G29690 | 29.487 | 156 | 95 | 4 | 326 | 476 | 33 | 178 | 4.97e-16 | 76.6 |
MS.gene91597.t1 | AT5G07850 | 24.324 | 444 | 285 | 19 | 1 | 432 | 1 | 405 | 7.04e-14 | 73.9 |
MS.gene91597.t1 | AT2G40230 | 21.915 | 470 | 317 | 18 | 7 | 471 | 3 | 427 | 9.25e-14 | 73.6 |
MS.gene91597.t1 | AT1G28680 | 22.901 | 393 | 251 | 13 | 48 | 431 | 40 | 389 | 1.53e-13 | 72.8 |
MS.gene91597.t1 | AT3G48720 | 23.278 | 421 | 254 | 17 | 69 | 472 | 60 | 428 | 7.60e-13 | 70.9 |
MS.gene91597.t1 | AT1G65450 | 24.262 | 474 | 313 | 18 | 8 | 476 | 17 | 449 | 7.91e-13 | 70.9 |
MS.gene91597.t1 | AT3G50280 | 22.276 | 413 | 267 | 15 | 31 | 432 | 27 | 396 | 3.90e-12 | 68.6 |
MS.gene91597.t1 | AT5G01210 | 24.890 | 454 | 297 | 15 | 31 | 465 | 27 | 455 | 2.93e-11 | 65.9 |
Find 100 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTACTTTCTTTGACATATTT+TGG | 0.113161 | 7.4:-84835202 | MS.gene91597:CDS |
TCACTACCAAATAACTATTT+TGG | 0.135502 | 7.4:-84834279 | MS.gene91597:CDS |
AATAACCACTTTCTGGAAAA+AGG | 0.147614 | 7.4:+84834829 | None:intergenic |
GAAGGATGTGATTGTGAATT+TGG | 0.152446 | 7.4:+84835137 | None:intergenic |
CCAATGGAATAACCACTTTC+TGG | 0.167311 | 7.4:+84834822 | None:intergenic |
AAGAATCTGTTGATTCTAAA+TGG | 0.182536 | 7.4:+84834880 | None:intergenic |
AGCAAATGGTGTTATCAAAA+TGG | 0.193782 | 7.4:-84834473 | MS.gene91597:CDS |
GTTATCAAAATGGGAATTAT+TGG | 0.234732 | 7.4:-84834463 | MS.gene91597:CDS |
GTGAGAAGTTCACAAATAAT+TGG | 0.252348 | 7.4:-84834632 | MS.gene91597:CDS |
GGTGTTTATGAGATTGATTT+TGG | 0.265782 | 7.4:-84834045 | MS.gene91597:CDS |
CAATTTCCAAAATAGTTATT+TGG | 0.276645 | 7.4:+84834273 | None:intergenic |
AGCGAGACAAAGAAGCTTTA+TGG | 0.284458 | 7.4:+84834913 | None:intergenic |
AGCAATTCATGGAATTAAAA+TGG | 0.285041 | 7.4:-84834358 | MS.gene91597:CDS |
GATAGTGAAGATTTGAGAAT+TGG | 0.292165 | 7.4:+84835092 | None:intergenic |
AATTACAACCGTTGTTTGAT+AGG | 0.299087 | 7.4:-84834683 | MS.gene91597:CDS |
TGCTTATGCCCTTGTTTGTT+TGG | 0.306724 | 7.4:-84834385 | MS.gene91597:CDS |
AACTTCTCACCAAGTTCATC+TGG | 0.318368 | 7.4:+84834645 | None:intergenic |
CGAAGAGAGTCTTCGAGCTT+TGG | 0.323617 | 7.4:+84834537 | None:intergenic |
AAGATGTTCCCAAATGAAAA+AGG | 0.331198 | 7.4:-84834594 | MS.gene91597:CDS |
CATCATCATTGGGATTGAAT+TGG | 0.334138 | 7.4:+84834997 | None:intergenic |
GATGGAGTTTCCTTTATCAT+TGG | 0.361065 | 7.4:-84834978 | MS.gene91597:CDS |
TTTAGAACGTTGTTTCTTGA+AGG | 0.361727 | 7.4:-84833892 | MS.gene91597:CDS |
CAACAAAGGTTGTGGTTCTT+CGG | 0.369447 | 7.4:+84834710 | None:intergenic |
CTTTATCCGGTAAAATCGTT+TGG | 0.369901 | 7.4:-84835046 | MS.gene91597:CDS |
CAACCATGTTTATCAAAGCT+TGG | 0.376272 | 7.4:-84834761 | MS.gene91597:CDS |
ATCAGACTCTCCAATGATAA+AGG | 0.377649 | 7.4:+84834968 | None:intergenic |
GAAACTATCTCCACCTTTGT+TGG | 0.379376 | 7.4:+84834012 | None:intergenic |
AGAATCTGTTGATTCTAAAT+GGG | 0.380644 | 7.4:+84834881 | None:intergenic |
GCGAGACAAAGAAGCTTTAT+GGG | 0.390830 | 7.4:+84834914 | None:intergenic |
GTGGATAGAGGTTTAACAAT+TGG | 0.394688 | 7.4:-84833988 | MS.gene91597:CDS |
AGTGAAGGATTTGAAATAAT+AGG | 0.395317 | 7.4:-84834090 | MS.gene91597:CDS |
ACTCACCATGCTGTTCTTGA+TGG | 0.395647 | 7.4:-84834792 | MS.gene91597:CDS |
AAAGGAAACTCCATCATCAT+TGG | 0.396435 | 7.4:+84834986 | None:intergenic |
GAGTAACTTTAATGTGTTCA+TGG | 0.397045 | 7.4:+84835261 | None:intergenic |
AAATTGTGTGTGGGGACATT+TGG | 0.398292 | 7.4:-84834256 | MS.gene91597:CDS |
AACCATGTTTATCAAAGCTT+GGG | 0.399105 | 7.4:-84834760 | MS.gene91597:CDS |
CAACACTTTCTTCCTTTATC+CGG | 0.406614 | 7.4:-84835059 | MS.gene91597:CDS |
TACCATCTTTGCTCTCTGCC+AGG | 0.406929 | 7.4:+84833965 | None:intergenic |
AAGGATGTGATTGTGAATTT+GGG | 0.407904 | 7.4:+84835138 | None:intergenic |
TGTTTGGCAAAAGCAATTCA+TGG | 0.416726 | 7.4:-84834369 | MS.gene91597:CDS |
GCAAATGGTGTTATCAAAAT+GGG | 0.418223 | 7.4:-84834472 | MS.gene91597:CDS |
AATATGTCAAAGAAAGTAAG+AGG | 0.422390 | 7.4:+84835206 | None:intergenic |
GTGGCAGGATCTAATAGATT+TGG | 0.423530 | 7.4:-84834066 | MS.gene91597:CDS |
CCAGAAAGTGGTTATTCCAT+TGG | 0.423707 | 7.4:-84834822 | MS.gene91597:CDS |
AATAAAGATGATAAATGAAA+AGG | 0.424032 | 7.4:-84834163 | MS.gene91597:CDS |
GGTAAAGGTGGAATTGAAGT+TGG | 0.427876 | 7.4:-84833946 | MS.gene91597:CDS |
GAGAACAAACGATGATAAAG+TGG | 0.433417 | 7.4:+84834413 | None:intergenic |
GAGATAGTTTCGGTGGATAG+AGG | 0.442745 | 7.4:-84834000 | MS.gene91597:CDS |
TTCAATTATTTGTCAAGTGA+AGG | 0.447336 | 7.4:-84834105 | MS.gene91597:CDS |
ATAAAGATGATAAATGAAAA+GGG | 0.447547 | 7.4:-84834162 | MS.gene91597:CDS |
AATGAAAAGGGTGTTCTTGA+AGG | 0.453937 | 7.4:-84834150 | MS.gene91597:CDS |
TAGAAGAAAACACGTTCTAC+TGG | 0.455942 | 7.4:+84835167 | None:intergenic |
TTGGATTACATAAATGAAGA+TGG | 0.466086 | 7.4:-84834219 | MS.gene91597:CDS |
GTAAAGGTGGAATTGAAGTT+GGG | 0.475472 | 7.4:-84833945 | MS.gene91597:CDS |
CAATTCAATCCCAATGATGA+TGG | 0.476347 | 7.4:-84834996 | MS.gene91597:CDS |
TTTGAACAAGATAAAGCAAA+TGG | 0.487133 | 7.4:-84834487 | MS.gene91597:CDS |
TTGGGATTGAATTGGATGAA+TGG | 0.488013 | 7.4:+84835005 | None:intergenic |
AAGGAAACTCCATCATCATT+GGG | 0.490933 | 7.4:+84834987 | None:intergenic |
GTTCTTGAAGGAGCTAGTGA+TGG | 0.493087 | 7.4:-84834138 | MS.gene91597:CDS |
TTCTTGAAGGAGCTAGTGAT+GGG | 0.497785 | 7.4:-84834137 | MS.gene91597:CDS |
AACAAAGGTGGAGATAGTTT+CGG | 0.498546 | 7.4:-84834010 | MS.gene91597:CDS |
AATTCTTGCAACAAAGGTTG+TGG | 0.499343 | 7.4:+84834702 | None:intergenic |
TTTAATGTTGCTCTTGTCGA+TGG | 0.499466 | 7.4:+84835286 | None:intergenic |
GGTTGTAATTCTTGCAACAA+AGG | 0.507240 | 7.4:+84834696 | None:intergenic |
TTTGGTTGATACAAAACCGT+TGG | 0.511791 | 7.4:-84834238 | MS.gene91597:CDS |
TGGATTACATAAATGAAGAT+GGG | 0.512542 | 7.4:-84834218 | MS.gene91597:CDS |
TAGAGGTTTAACAATTGGCC+TGG | 0.518320 | 7.4:-84833983 | MS.gene91597:CDS |
AAATAGTTATTTGGTAGTGA+TGG | 0.521146 | 7.4:+84834282 | None:intergenic |
GTCAAAGACCCAGATGAACT+TGG | 0.526008 | 7.4:-84834654 | MS.gene91597:CDS |
TTGAATTGGATGAATGGTTG+TGG | 0.526009 | 7.4:+84835011 | None:intergenic |
TTTGAAATAATAGGAGTGGC+AGG | 0.533622 | 7.4:-84834081 | MS.gene91597:CDS |
GGCCTGGCAGAGAGCAAAGA+TGG | 0.534800 | 7.4:-84833967 | MS.gene91597:CDS |
CGGATAAAGGAAGAAAGTGT+TGG | 0.538758 | 7.4:+84835060 | None:intergenic |
TAACCTTGCTCTGCAATCTA+CGG | 0.549902 | 7.4:+84834308 | None:intergenic |
TGTTCTAGATAAGAATGTAA+TGG | 0.550784 | 7.4:-84833920 | MS.gene91597:CDS |
AGAAAACACGTTCTACTGGA+TGG | 0.552911 | 7.4:+84835171 | None:intergenic |
TCTTCATTTATGTAATCCAA+CGG | 0.557148 | 7.4:+84834222 | None:intergenic |
AGCCCAAGCTTTGATAAACA+TGG | 0.576503 | 7.4:+84834758 | None:intergenic |
GCAGAGAGCAAAGATGGTAA+AGG | 0.579752 | 7.4:-84833961 | MS.gene91597:CDS |
GAATCTGTTGATTCTAAATG+GGG | 0.580465 | 7.4:+84834882 | None:intergenic |
ACTTCTCACCAAGTTCATCT+GGG | 0.598487 | 7.4:+84834646 | None:intergenic |
TAAAGGAAGAAAGTGTTGGA+GGG | 0.602546 | 7.4:+84835064 | None:intergenic |
ATGGTGAGTGCTTATTCCAA+TGG | 0.605931 | 7.4:+84834806 | None:intergenic |
ATAAAGGAAGAAAGTGTTGG+AGG | 0.607267 | 7.4:+84835063 | None:intergenic |
ATATGTCAAAGAAAGTAAGA+GGG | 0.609956 | 7.4:+84835207 | None:intergenic |
GTGGGGAAGACCAACAAAGG+TGG | 0.612550 | 7.4:-84834022 | MS.gene91597:CDS |
TCACCGTAGATTGCAGAGCA+AGG | 0.613072 | 7.4:-84834311 | MS.gene91597:CDS |
GAGAGCAAAGATGGTAAAGG+TGG | 0.619484 | 7.4:-84833958 | MS.gene91597:CDS |
AGGATTTGAAATAATAGGAG+TGG | 0.624166 | 7.4:-84834085 | MS.gene91597:CDS |
TGGGTGGGGAAGACCAACAA+AGG | 0.627130 | 7.4:-84834025 | MS.gene91597:CDS |
AAAGGTGGAGATAGTTTCGG+TGG | 0.628419 | 7.4:-84834007 | MS.gene91597:CDS |
TATGTCAAAGAAAGTAAGAG+GGG | 0.629256 | 7.4:+84835208 | None:intergenic |
GGATTACATAAATGAAGATG+GGG | 0.640685 | 7.4:-84834217 | MS.gene91597:CDS |
ACGATATTCCTATCAAACAA+CGG | 0.641063 | 7.4:+84834675 | None:intergenic |
GATGTGATTGTGAATTTGGG+AGG | 0.652869 | 7.4:+84835141 | None:intergenic |
AATGGTTGTGGAGAATCAGA+AGG | 0.653744 | 7.4:+84835023 | None:intergenic |
ATGTGATTGTGAATTTGGGA+GGG | 0.663766 | 7.4:+84835142 | None:intergenic |
AGAACAAACGATGATAAAGT+GGG | 0.666203 | 7.4:+84834414 | None:intergenic |
CGAGACAAAGAAGCTTTATG+GGG | 0.673549 | 7.4:+84834915 | None:intergenic |
ACAAACGATGATAAAGTGGG+AGG | 0.690874 | 7.4:+84834417 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAGATGATAAATGAAA+AGG | - | chr7.4:84835006-84835025 | MS.gene91597:CDS | 15.0% |
!! | ATAAAGATGATAAATGAAAA+GGG | - | chr7.4:84835007-84835026 | MS.gene91597:CDS | 15.0% |
!! | CAATTTCCAAAATAGTTATT+TGG | + | chr7.4:84834899-84834918 | None:intergenic | 20.0% |
!!! | TTACTTTCTTTGACATATTT+TGG | - | chr7.4:84833967-84833986 | MS.gene91597:CDS | 20.0% |
! | AATATGTCAAAGAAAGTAAG+AGG | + | chr7.4:84833966-84833985 | None:intergenic | 25.0% |
! | AGCAATTCATGGAATTAAAA+TGG | - | chr7.4:84834811-84834830 | MS.gene91597:CDS | 25.0% |
! | ATATGTCAAAGAAAGTAAGA+GGG | + | chr7.4:84833965-84833984 | None:intergenic | 25.0% |
! | GTTATCAAAATGGGAATTAT+TGG | - | chr7.4:84834706-84834725 | MS.gene91597:CDS | 25.0% |
! | TCTTCATTTATGTAATCCAA+CGG | + | chr7.4:84834950-84834969 | None:intergenic | 25.0% |
! | TGGATTACATAAATGAAGAT+GGG | - | chr7.4:84834951-84834970 | MS.gene91597:CDS | 25.0% |
! | TTCAATTATTTGTCAAGTGA+AGG | - | chr7.4:84835064-84835083 | MS.gene91597:CDS | 25.0% |
! | TTGGATTACATAAATGAAGA+TGG | - | chr7.4:84834950-84834969 | MS.gene91597:CDS | 25.0% |
! | TTTGAACAAGATAAAGCAAA+TGG | - | chr7.4:84834682-84834701 | MS.gene91597:CDS | 25.0% |
!! | AGTGAAGGATTTGAAATAAT+AGG | - | chr7.4:84835079-84835098 | MS.gene91597:CDS | 25.0% |
!! | TCACTACCAAATAACTATTT+TGG | - | chr7.4:84834890-84834909 | MS.gene91597:CDS | 25.0% |
!! | TGTTCTAGATAAGAATGTAA+TGG | - | chr7.4:84835249-84835268 | MS.gene91597:CDS | 25.0% |
!!! | AAATAGTTATTTGGTAGTGA+TGG | + | chr7.4:84834890-84834909 | None:intergenic | 25.0% |
!!! | AAGAATCTGTTGATTCTAAA+TGG | + | chr7.4:84834292-84834311 | None:intergenic | 25.0% |
!!! | AGAATCTGTTGATTCTAAAT+GGG | + | chr7.4:84834291-84834310 | None:intergenic | 25.0% |
!!! | AGTTTTTGGAAAAAGAAAGA+AGG | + | chr7.4:84834053-84834072 | None:intergenic | 25.0% |
!!! | GTGTTTATGAGATTGATTTT+GGG | - | chr7.4:84835125-84835144 | MS.gene91597:CDS | 25.0% |
!!! | TTTCGTTTCCTTTTTCATTT+GGG | + | chr7.4:84834586-84834605 | None:intergenic | 25.0% |
AACCATGTTTATCAAAGCTT+GGG | - | chr7.4:84834409-84834428 | MS.gene91597:CDS | 30.0% | |
AAGATGTTCCCAAATGAAAA+AGG | - | chr7.4:84834575-84834594 | MS.gene91597:CDS | 30.0% | |
AAGGATGTGATTGTGAATTT+GGG | + | chr7.4:84834034-84834053 | None:intergenic | 30.0% | |
AATTACAACCGTTGTTTGAT+AGG | - | chr7.4:84834486-84834505 | MS.gene91597:CDS | 30.0% | |
ACGATATTCCTATCAAACAA+CGG | + | chr7.4:84834497-84834516 | None:intergenic | 30.0% | |
AGAACAAACGATGATAAAGT+GGG | + | chr7.4:84834758-84834777 | None:intergenic | 30.0% | |
GAGTAACTTTAATGTGTTCA+TGG | + | chr7.4:84833911-84833930 | None:intergenic | 30.0% | |
GATAGTGAAGATTTGAGAAT+TGG | + | chr7.4:84834080-84834099 | None:intergenic | 30.0% | |
GGATTACATAAATGAAGATG+GGG | - | chr7.4:84834952-84834971 | MS.gene91597:CDS | 30.0% | |
GTGAGAAGTTCACAAATAAT+TGG | - | chr7.4:84834537-84834556 | MS.gene91597:CDS | 30.0% | |
TATGTCAAAGAAAGTAAGAG+GGG | + | chr7.4:84833964-84833983 | None:intergenic | 30.0% | |
! | AATAACCACTTTCTGGAAAA+AGG | + | chr7.4:84834343-84834362 | None:intergenic | 30.0% |
! | AGGATTTGAAATAATAGGAG+TGG | - | chr7.4:84835084-84835103 | MS.gene91597:CDS | 30.0% |
! | ATAACCACTTTCTGGAAAAA+GGG | + | chr7.4:84834342-84834361 | None:intergenic | 30.0% |
! | TGAGAATTGGAACAAGTTTT+TGG | + | chr7.4:84834067-84834086 | None:intergenic | 30.0% |
!! | ACTATTTTGGAAATTGTGTG+TGG | - | chr7.4:84834903-84834922 | MS.gene91597:CDS | 30.0% |
!! | AGCAAATGGTGTTATCAAAA+TGG | - | chr7.4:84834696-84834715 | MS.gene91597:CDS | 30.0% |
!! | CTATTTTGGAAATTGTGTGT+GGG | - | chr7.4:84834904-84834923 | MS.gene91597:CDS | 30.0% |
!! | CTTTCGTTTCCTTTTTCATT+TGG | + | chr7.4:84834587-84834606 | None:intergenic | 30.0% |
!! | GAATCTGTTGATTCTAAATG+GGG | + | chr7.4:84834290-84834309 | None:intergenic | 30.0% |
!! | GCAAATGGTGTTATCAAAAT+GGG | - | chr7.4:84834697-84834716 | MS.gene91597:CDS | 30.0% |
!! | GGTGTTTATGAGATTGATTT+TGG | - | chr7.4:84835124-84835143 | MS.gene91597:CDS | 30.0% |
!! | TATTTTGGAAATTGTGTGTG+GGG | - | chr7.4:84834905-84834924 | MS.gene91597:CDS | 30.0% |
!! | TTATGAGATTGATTTTGGGT+GGG | - | chr7.4:84835129-84835148 | MS.gene91597:CDS | 30.0% |
!! | TTTAGAACGTTGTTTCTTGA+AGG | - | chr7.4:84835277-84835296 | MS.gene91597:CDS | 30.0% |
!! | TTTATGAGATTGATTTTGGG+TGG | - | chr7.4:84835128-84835147 | MS.gene91597:CDS | 30.0% |
!!! | TCTTTGACATATTTTGGCTT+AGG | - | chr7.4:84833973-84833992 | MS.gene91597:CDS | 30.0% |
AAAGGAAACTCCATCATCAT+TGG | + | chr7.4:84834186-84834205 | None:intergenic | 35.0% | |
AACAAAGGTGGAGATAGTTT+CGG | - | chr7.4:84835159-84835178 | MS.gene91597:CDS | 35.0% | |
AAGGAAACTCCATCATCATT+GGG | + | chr7.4:84834185-84834204 | None:intergenic | 35.0% | |
AATTCTTGCAACAAAGGTTG+TGG | + | chr7.4:84834470-84834489 | None:intergenic | 35.0% | |
ATCAGACTCTCCAATGATAA+AGG | + | chr7.4:84834204-84834223 | None:intergenic | 35.0% | |
ATGTGATTGTGAATTTGGGA+GGG | + | chr7.4:84834030-84834049 | None:intergenic | 35.0% | |
CAACACTTTCTTCCTTTATC+CGG | - | chr7.4:84834110-84834129 | MS.gene91597:CDS | 35.0% | |
CAACCATGTTTATCAAAGCT+TGG | - | chr7.4:84834408-84834427 | MS.gene91597:CDS | 35.0% | |
CAATTCAATCCCAATGATGA+TGG | - | chr7.4:84834173-84834192 | MS.gene91597:CDS | 35.0% | |
CATCATCATTGGGATTGAAT+TGG | + | chr7.4:84834175-84834194 | None:intergenic | 35.0% | |
CTTTATCCGGTAAAATCGTT+TGG | - | chr7.4:84834123-84834142 | MS.gene91597:CDS | 35.0% | |
GAAGGATGTGATTGTGAATT+TGG | + | chr7.4:84834035-84834054 | None:intergenic | 35.0% | |
GAGAACAAACGATGATAAAG+TGG | + | chr7.4:84834759-84834778 | None:intergenic | 35.0% | |
GATGGAGTTTCCTTTATCAT+TGG | - | chr7.4:84834191-84834210 | MS.gene91597:CDS | 35.0% | |
GGTTGTAATTCTTGCAACAA+AGG | + | chr7.4:84834476-84834495 | None:intergenic | 35.0% | |
GTAAAGGTGGAATTGAAGTT+GGG | - | chr7.4:84835224-84835243 | MS.gene91597:CDS | 35.0% | |
GTGGATAGAGGTTTAACAAT+TGG | - | chr7.4:84835181-84835200 | MS.gene91597:CDS | 35.0% | |
TAGAAGAAAACACGTTCTAC+TGG | + | chr7.4:84834005-84834024 | None:intergenic | 35.0% | |
TGTTTGGCAAAAGCAATTCA+TGG | - | chr7.4:84834800-84834819 | MS.gene91597:CDS | 35.0% | |
TTGAATTGGATGAATGGTTG+TGG | + | chr7.4:84834161-84834180 | None:intergenic | 35.0% | |
TTGGGATTGAATTGGATGAA+TGG | + | chr7.4:84834167-84834186 | None:intergenic | 35.0% | |
TTTAATGTTGCTCTTGTCGA+TGG | + | chr7.4:84833886-84833905 | None:intergenic | 35.0% | |
! | ATAACCCTTTTTCCAGAAAG+TGG | - | chr7.4:84834335-84834354 | MS.gene91597:CDS | 35.0% |
! | ATTTTCCATCAAGAACAGCA+TGG | + | chr7.4:84834385-84834404 | None:intergenic | 35.0% |
! | CAAACGATTTTACCGGATAA+AGG | + | chr7.4:84834125-84834144 | None:intergenic | 35.0% |
! | TGCTTTTGCCAAACAAACAA+GGG | + | chr7.4:84834795-84834814 | None:intergenic | 35.0% |
! | TTTCTGGAAAAAGGGTTATC+TGG | + | chr7.4:84834334-84834353 | None:intergenic | 35.0% |
! | TTTGAAATAATAGGAGTGGC+AGG | - | chr7.4:84835088-84835107 | MS.gene91597:CDS | 35.0% |
! | TTTGGTTGATACAAAACCGT+TGG | - | chr7.4:84834931-84834950 | MS.gene91597:CDS | 35.0% |
!! | AATGAAAAGGGTGTTCTTGA+AGG | - | chr7.4:84835019-84835038 | MS.gene91597:CDS | 35.0% |
!! | ATAAAGGAAGAAAGTGTTGG+AGG | + | chr7.4:84834109-84834128 | None:intergenic | 35.0% |
!! | TAAAGGAAGAAAGTGTTGGA+GGG | + | chr7.4:84834108-84834127 | None:intergenic | 35.0% |
!! | TATGAGATTGATTTTGGGTG+GGG | - | chr7.4:84835130-84835149 | MS.gene91597:CDS | 35.0% |
!! | TTGCTTTTGCCAAACAAACA+AGG | + | chr7.4:84834796-84834815 | None:intergenic | 35.0% |
!!! | AGGGGTTGTTGTTGTTTTTT+GGG | + | chr7.4:84833946-84833965 | None:intergenic | 35.0% |
!!! | GTTGTTTTTTGGGTTGATGA+TGG | + | chr7.4:84833936-84833955 | None:intergenic | 35.0% |
AAATTGTGTGTGGGGACATT+TGG | - | chr7.4:84834913-84834932 | MS.gene91597:CDS | 40.0% | |
AACTTCTCACCAAGTTCATC+TGG | + | chr7.4:84834527-84834546 | None:intergenic | 40.0% | |
AATGGTTGTGGAGAATCAGA+AGG | + | chr7.4:84834149-84834168 | None:intergenic | 40.0% | |
ACAAACGATGATAAAGTGGG+AGG | + | chr7.4:84834755-84834774 | None:intergenic | 40.0% | |
ACTTCTCACCAAGTTCATCT+GGG | + | chr7.4:84834526-84834545 | None:intergenic | 40.0% | |
AGAAAACACGTTCTACTGGA+TGG | + | chr7.4:84834001-84834020 | None:intergenic | 40.0% | |
AGCGAGACAAAGAAGCTTTA+TGG | + | chr7.4:84834259-84834278 | None:intergenic | 40.0% | |
ATGGTGAGTGCTTATTCCAA+TGG | + | chr7.4:84834366-84834385 | None:intergenic | 40.0% | |
CAACAAAGGTTGTGGTTCTT+CGG | + | chr7.4:84834462-84834481 | None:intergenic | 40.0% | |
CCAATGGAATAACCACTTTC+TGG | + | chr7.4:84834350-84834369 | None:intergenic | 40.0% | |
CCAGAAAGTGGTTATTCCAT+TGG | - | chr7.4:84834347-84834366 | MS.gene91597:CDS | 40.0% | |
GAAACTATCTCCACCTTTGT+TGG | + | chr7.4:84835160-84835179 | None:intergenic | 40.0% | |
GATGTGATTGTGAATTTGGG+AGG | + | chr7.4:84834031-84834050 | None:intergenic | 40.0% | |
GGTAAAGGTGGAATTGAAGT+TGG | - | chr7.4:84835223-84835242 | MS.gene91597:CDS | 40.0% | |
GTGGCAGGATCTAATAGATT+TGG | - | chr7.4:84835103-84835122 | MS.gene91597:CDS | 40.0% | |
TAACCTTGCTCTGCAATCTA+CGG | + | chr7.4:84834864-84834883 | None:intergenic | 40.0% | |
TAGAGGTTTAACAATTGGCC+TGG | - | chr7.4:84835186-84835205 | MS.gene91597:CDS | 40.0% | |
TTCTTGAAGGAGCTAGTGAT+GGG | - | chr7.4:84835032-84835051 | MS.gene91597:CDS | 40.0% | |
! | AGAAGGCCAAACGATTTTAC+CGG | + | chr7.4:84834132-84834151 | None:intergenic | 40.0% |
! | AGCCCAAGCTTTGATAAACA+TGG | + | chr7.4:84834414-84834433 | None:intergenic | 40.0% |
! | CGAGACAAAGAAGCTTTATG+GGG | + | chr7.4:84834257-84834276 | None:intergenic | 40.0% |
! | CGGATAAAGGAAGAAAGTGT+TGG | + | chr7.4:84834112-84834131 | None:intergenic | 40.0% |
! | GCGAGACAAAGAAGCTTTAT+GGG | + | chr7.4:84834258-84834277 | None:intergenic | 40.0% |
! | TGCTTATGCCCTTGTTTGTT+TGG | - | chr7.4:84834784-84834803 | MS.gene91597:CDS | 40.0% |
!!! | GAGGGGTTGTTGTTGTTTTT+TGG | + | chr7.4:84833947-84833966 | None:intergenic | 40.0% |
!!! | GTTTTTTGGGTTGATGATGG+AGG | + | chr7.4:84833933-84833952 | None:intergenic | 40.0% |
AAAGGTGGAGATAGTTTCGG+TGG | - | chr7.4:84835162-84835181 | MS.gene91597:CDS | 45.0% | |
ACTCACCATGCTGTTCTTGA+TGG | - | chr7.4:84834377-84834396 | MS.gene91597:CDS | 45.0% | |
GAGAGCAAAGATGGTAAAGG+TGG | - | chr7.4:84835211-84835230 | MS.gene91597:CDS | 45.0% | |
GAGATAGTTTCGGTGGATAG+AGG | - | chr7.4:84835169-84835188 | MS.gene91597:CDS | 45.0% | |
GCAGAGAGCAAAGATGGTAA+AGG | - | chr7.4:84835208-84835227 | MS.gene91597:CDS | 45.0% | |
GTCAAAGACCCAGATGAACT+TGG | - | chr7.4:84834515-84834534 | MS.gene91597:CDS | 45.0% | |
GTTCTTGAAGGAGCTAGTGA+TGG | - | chr7.4:84835031-84835050 | MS.gene91597:CDS | 45.0% | |
CGAAGAGAGTCTTCGAGCTT+TGG | + | chr7.4:84834635-84834654 | None:intergenic | 50.0% | |
TACCATCTTTGCTCTCTGCC+AGG | + | chr7.4:84835207-84835226 | None:intergenic | 50.0% | |
TCACCGTAGATTGCAGAGCA+AGG | - | chr7.4:84834858-84834877 | MS.gene91597:CDS | 50.0% | |
GTGGGGAAGACCAACAAAGG+TGG | - | chr7.4:84835147-84835166 | MS.gene91597:CDS | 55.0% | |
TGGGTGGGGAAGACCAACAA+AGG | - | chr7.4:84835144-84835163 | MS.gene91597:CDS | 55.0% | |
GGCCTGGCAGAGAGCAAAGA+TGG | - | chr7.4:84835202-84835221 | MS.gene91597:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 84833876 | 84835315 | 84833876 | ID=MS.gene91597 |
chr7.4 | mRNA | 84833876 | 84835315 | 84833876 | ID=MS.gene91597.t1;Parent=MS.gene91597 |
chr7.4 | exon | 84833876 | 84835315 | 84833876 | ID=MS.gene91597.t1.exon1;Parent=MS.gene91597.t1 |
chr7.4 | CDS | 84833876 | 84835315 | 84833876 | ID=cds.MS.gene91597.t1;Parent=MS.gene91597.t1 |
Gene Sequence |
Protein sequence |