AlfalfaGEDB | MS.gene021910

M. sativa cultivar XinJiangDaYe / MS.gene021910

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016740 GO:0016746 GO:0016747
PFAM: PF02458.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene021910.t1	RHN44407.1	86	480	67	0	1	480	1	480	4.90E-235	823.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene021910.t1	Q940Z5	37.4	479	270	14	8	477	10	467	1.9e-78	294.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene021910.t1	A0A396H0H8	86.0	480	67	0	1	480	1	480	3.6e-235	823.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene028996	MS.gene021910	PPI
MS.gene021910	MS.gene50356	PPI
MS.gene44644	MS.gene021910	PPI
MS.gene021910	MS.gene87536	PPI
MS.gene35745	MS.gene021910	PPI
MS.gene021910	MS.gene56797	PPI
MS.gene011796	MS.gene021910	PPI
MS.gene011801	MS.gene021910	PPI
MS.gene87537	MS.gene021910	PPI
MS.gene021910	MS.gene99218	PPI
MS.gene000764	MS.gene021910	PPI
MS.gene021910	MS.gene44630	PPI
MS.gene021910	MS.gene069422	PPI
MS.gene48582	MS.gene021910	PPI
MS.gene013787	MS.gene021910	PPI
MS.gene021910	MS.gene78818	PPI
MS.gene021906	MS.gene021910	PPI
MS.gene31542	MS.gene021910	PPI
MS.gene87532	MS.gene021910	PPI
MS.gene46265	MS.gene021910	PPI
MS.gene063868	MS.gene021910	PPI
MS.gene48581	MS.gene021910	PPI
MS.gene021910	MS.gene016532	PPI
MS.gene021910	MS.gene91611	PPI
MS.gene021910	MS.gene44647	PPI
MS.gene021910	MS.gene35740	PPI
MS.gene99221	MS.gene021910	PPI
MS.gene03202	MS.gene021910	PPI
MS.gene021910	MS.gene011799	PPI
MS.gene021910	MS.gene44643	PPI
MS.gene021910	MS.gene002544	PPI
MS.gene021910	MS.gene50420	PPI
MS.gene007831	MS.gene021910	PPI
MS.gene021910	MS.gene021905	PPI
MS.gene44642	MS.gene021910	PPI
MS.gene021910	MS.gene070270	PPI
MS.gene91609	MS.gene021910	PPI
MS.gene021910	MS.gene50382	PPI
MS.gene021910	MS.gene90496	PPI
MS.gene99222	MS.gene021910	PPI
MS.gene021910	MS.gene44463	PPI
MS.gene60208	MS.gene021910	PPI
MS.gene021910	MS.gene87191	PPI
MS.gene021910	MS.gene48584	PPI
MS.gene032349	MS.gene021910	PPI
MS.gene021910	MS.gene004218	PPI
MS.gene066656	MS.gene021910	PPI
MS.gene066660	MS.gene021910	PPI
MS.gene021910	MS.gene016477	PPI
MS.gene021910	MS.gene021913	PPI
MS.gene021910	MS.gene02573	PPI
MS.gene021910	MS.gene011798	PPI
MS.gene021910	MS.gene028994	PPI
MS.gene021910	MS.gene87577	PPI
MS.gene012360	MS.gene021910	PPI
MS.gene35744	MS.gene021910	PPI
MS.gene44643	MS.gene021910	PPI
MS.gene028999	MS.gene021910	PPI
MS.gene021910	MS.gene000764	PPI
MS.gene50379	MS.gene021910	PPI
MS.gene021910	MS.gene91614	PPI
MS.gene021910	MS.gene91613	PPI
MS.gene021910	MS.gene90492	PPI
MS.gene021910	MS.gene043350	PPI
MS.gene021910	MS.gene56798	PPI
MS.gene073299	MS.gene021910	PPI
MS.gene021910	MS.gene56796	PPI
MS.gene91597	MS.gene021910	PPI
MS.gene021910	MS.gene021906	PPI
MS.gene021916	MS.gene021910	PPI
MS.gene32261	MS.gene021910	PPI
MS.gene31546	MS.gene021910	PPI
MS.gene021910	MS.gene44642	PPI
MS.gene021910	MS.gene96337	PPI
MS.gene021910	MS.gene066658	PPI
MS.gene021910	MS.gene87496	PPI
MS.gene99219	MS.gene021910	PPI
MS.gene021910	MS.gene070019	PPI
MS.gene021910	MS.gene043348	PPI
MS.gene021910	MS.gene021917	PPI
MS.gene56795	MS.gene021910	PPI
MS.gene021910	MS.gene90493	PPI
MS.gene021910	MS.gene91596	PPI
MS.gene021910	MS.gene021914	PPI
MS.gene066657	MS.gene021910	PPI
MS.gene021910	MS.gene48581	PPI
MS.gene021910	MS.gene31540	PPI
MS.gene069423	MS.gene021910	PPI
MS.gene021910	MS.gene066657	PPI
MS.gene021910	MS.gene56799	PPI
MS.gene021910	MS.gene063865	PPI
MS.gene021910	MS.gene44640	PPI
MS.gene021910	MS.gene032349	PPI
MS.gene91615	MS.gene021910	PPI
MS.gene021910	MS.gene069767	PPI
MS.gene021910	MS.gene021904	PPI
MS.gene021910	MS.gene000763	PPI
MS.gene44633	MS.gene021910	PPI
MS.gene021910	MS.gene011716	PPI
MS.gene021910	MS.gene44633	PPI
MS.gene021910	MS.gene28251	PPI
MS.gene021910	MS.gene91595	PPI
MS.gene99223	MS.gene021910	PPI
MS.gene021910	MS.gene90491	PPI
MS.gene48585	MS.gene021910	PPI
MS.gene021910	MS.gene043352	PPI
MS.gene021910	MS.gene50384	PPI
MS.gene021910	MS.gene38977	PPI
MS.gene021910	MS.gene066701	PPI
MS.gene011837	MS.gene021910	PPI
MS.gene021910	MS.gene021909	PPI
MS.gene021910	MS.gene021915	PPI
MS.gene021910	MS.gene50355	PPI
MS.gene066634	MS.gene021910	PPI
MS.gene35741	MS.gene021910	PPI
MS.gene043346	MS.gene021910	PPI
MS.gene91599	MS.gene021910	PPI
MS.gene021910	MS.gene91612	PPI
MS.gene91598	MS.gene021910	PPI
MS.gene49853	MS.gene021910	PPI
MS.gene021910	MS.gene028998	PPI
MS.gene021910	MS.gene064101	PPI
MS.gene021910	MS.gene31545	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene021910.t1	MTR_7g013850	74.948	483	118	2	1	480	1	483	0.0	743
MS.gene021910.t1	MTR_7g014200	58.592	483	179	11	1	477	1	468	0.0	541
MS.gene021910.t1	MTR_7g014160	56.757	481	193	10	5	480	6	476	0.0	530
MS.gene021910.t1	MTR_7g014610	56.907	485	193	12	1	478	1	476	3.38e-175	501
MS.gene021910.t1	MTR_7g014620	50.753	465	191	9	19	480	6	435	1.57e-146	426
MS.gene021910.t1	MTR_7g014630	49.593	369	161	8	6	361	7	363	1.37e-108	327
MS.gene021910.t1	MTR_6g015320	39.709	481	259	10	1	477	1	454	2.82e-107	327
MS.gene021910.t1	MTR_6g015315	40.211	475	259	11	4	477	2	452	2.87e-105	321
MS.gene021910.t1	MTR_6g015850	39.959	488	251	15	1	477	1	457	3.92e-99	306
MS.gene021910.t1	MTR_6g015830	40.693	462	233	13	25	477	31	460	1.44e-97	301
MS.gene021910.t1	MTR_6g015815	40.586	478	236	13	11	477	20	460	2.64e-97	301
MS.gene021910.t1	MTR_7g014230	37.736	477	264	11	9	476	5	457	1.63e-95	296
MS.gene021910.t1	MTR_7g014330	38.046	481	259	15	9	477	3	456	1.73e-95	296
MS.gene021910.t1	MTR_7g014250	36.929	482	263	14	9	477	3	456	5.83e-92	287
MS.gene021910.t1	MTR_3g028210	35.197	483	274	15	8	477	8	464	6.73e-76	246
MS.gene021910.t1	MTR_7g014180	66.480	179	53	5	1	178	1	173	8.35e-70	220
MS.gene021910.t1	MTR_2g089765	31.301	492	283	15	11	477	21	482	3.53e-66	221
MS.gene021910.t1	MTR_7g014670	57.692	182	75	2	297	477	79	259	1.45e-65	212
MS.gene021910.t1	MTR_7g014360	32.518	409	226	12	76	477	21	386	1.63e-62	208
MS.gene021910.t1	MTR_2g089670	30.753	465	279	14	26	477	43	477	1.46e-58	201
MS.gene021910.t1	MTR_3g087640	30.675	489	293	15	9	477	10	472	3.98e-58	199
MS.gene021910.t1	MTR_7g015860	31.340	485	261	15	8	463	5	446	4.29e-58	199
MS.gene021910.t1	MTR_2g089650	29.072	485	299	12	8	477	9	463	2.18e-57	197
MS.gene021910.t1	MTR_2g089735	31.858	452	264	13	41	477	39	461	4.63e-55	191
MS.gene021910.t1	MTR_2g089755	29.701	468	282	14	28	477	37	475	1.01e-54	190
MS.gene021910.t1	MTR_8g012750	29.960	494	294	18	8	475	3	470	2.92e-53	186
MS.gene021910.t1	MTR_6g015310	31.852	405	203	11	51	455	2	333	1.48e-52	181
MS.gene021910.t1	MTR_7g014310	26.807	332	176	9	130	460	41	306	7.02e-33	127
MS.gene021910.t1	MTR_2g089665	24.890	454	206	15	11	454	7	335	9.61e-26	108
MS.gene021910.t1	MTR_3g435300	32.159	227	129	6	7	222	3	215	3.90e-25	104
MS.gene021910.t1	MTR_6g045553	25.163	461	277	18	7	439	13	433	1.10e-20	95.1
MS.gene021910.t1	MTR_3g070170	25.376	465	266	21	8	439	12	428	2.70e-20	94.0
MS.gene021910.t1	MTR_3g101900	24.115	452	283	17	28	466	30	434	5.70e-19	89.7
MS.gene021910.t1	MTR_4g007540	22.912	467	277	21	31	475	27	432	9.90e-19	88.6
MS.gene021910.t1	MTR_8g075610	23.822	382	218	16	67	429	47	374	4.89e-18	86.7
MS.gene021910.t1	MTR_3g049150	24.887	442	260	19	63	477	51	447	6.93e-18	86.3
MS.gene021910.t1	MTR_3g026950	23.810	441	263	19	64	474	51	448	5.76e-17	83.6
MS.gene021910.t1	MTR_8g096530	25.747	435	253	17	7	429	6	382	2.31e-16	81.6
MS.gene021910.t1	MTR_3g026310	23.636	440	279	18	17	441	14	411	3.40e-16	81.3
MS.gene021910.t1	MTR_7g086000	23.980	392	226	14	67	429	60	408	4.54e-16	80.9
MS.gene021910.t1	MTR_2g064495	22.414	464	282	20	31	475	27	431	5.95e-16	80.1
MS.gene021910.t1	MTR_2g105330	22.629	464	281	20	31	475	27	431	1.52e-15	79.0
MS.gene021910.t1	MTR_3g101930	23.517	472	301	17	13	466	12	441	1.50e-14	75.9
MS.gene021910.t1	MTR_7g014210	32.710	107	70	2	335	439	24	130	2.99e-14	70.9
MS.gene021910.t1	MTR_4g094842	25.307	407	219	16	62	439	57	407	3.01e-14	75.1
MS.gene021910.t1	MTR_4g055170	22.977	383	246	13	50	426	59	398	1.75e-13	72.8
MS.gene021910.t1	MTR_4g097090	23.641	423	259	18	26	428	28	406	1.99e-13	72.4
MS.gene021910.t1	MTR_7g014205	29.032	124	76	2	317	439	2	114	2.91e-13	66.6
MS.gene021910.t1	MTR_7g014340	54.930	71	25	2	9	75	3	70	4.76e-13	65.5
MS.gene021910.t1	MTR_3g098980	24.567	289	174	11	67	352	66	313	6.15e-13	70.9
MS.gene021910.t1	MTR_8g467590	25.000	400	225	19	60	442	53	394	5.18e-12	68.2
MS.gene021910.t1	MTR_7g014220	60.377	53	18	1	25	77	15	64	5.51e-12	62.0
MS.gene021910.t1	MTR_2g015430	20.601	466	284	17	8	456	2	398	9.34e-12	67.4
MS.gene021910.t1	MTR_3g435290	33.333	120	77	2	358	477	1	117	5.31e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene021910.t1	AT5G39050	37.838	481	269	14	6	477	8	467	9.13e-92	287
MS.gene021910.t1	AT3G29590	36.874	499	242	13	1	477	1	448	4.66e-90	282
MS.gene021910.t1	AT3G29635	37.637	457	255	12	24	477	25	454	5.37e-89	280
MS.gene021910.t1	AT5G39080	37.630	481	270	15	1	474	1	458	1.77e-87	276
MS.gene021910.t1	AT3G29670	37.578	479	258	14	8	477	3	449	2.23e-86	273
MS.gene021910.t1	AT5G39090	36.042	480	271	12	1	477	1	447	1.23e-84	268
MS.gene021910.t1	AT5G61160	33.475	472	284	13	8	475	3	448	1.17e-78	253
MS.gene021910.t1	AT3G29680	35.158	475	270	14	4	473	2	443	1.15e-72	237
MS.gene021910.t1	AT1G03940	29.940	501	290	16	1	477	1	464	1.45e-60	206
MS.gene021910.t1	AT1G03495	31.117	376	208	15	1	359	1	342	5.91e-39	144
MS.gene021910.t1	AT5G23940	25.983	458	263	21	8	439	3	410	9.33e-24	104
MS.gene021910.t1	AT2G19070	24.816	407	246	17	41	428	37	402	4.94e-20	92.8
MS.gene021910.t1	AT3G29720	35.556	180	84	8	130	303	48	201	8.01e-19	85.5
MS.gene021910.t1	AT3G29690	31.788	151	97	2	328	477	33	178	1.44e-17	80.9
MS.gene021910.t1	AT2G39980	23.265	490	328	14	1	466	1	466	5.48e-17	84.0
MS.gene021910.t1	AT5G48930	22.699	489	298	20	8	475	3	432	1.11e-16	82.4
MS.gene021910.t1	AT5G67150	22.467	454	307	12	23	471	24	437	3.88e-16	80.9
MS.gene021910.t1	AT5G41040	22.554	368	238	14	67	429	69	394	7.93e-13	70.9
MS.gene021910.t1	AT5G41040	22.554	368	238	14	67	429	85	410	1.13e-12	70.5
MS.gene021910.t1	AT3G48720	23.200	375	227	15	67	430	61	385	1.54e-12	69.7
MS.gene021910.t1	AT4G31910	22.340	376	230	13	44	403	46	375	4.60e-12	68.6

Find 55 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATTACTTCCCTACTCAAAA+AGG	0.196644	7.1:-81853601	None:intergenic
GTAGGGTGTGATTGTGAATT+TGG	0.209360	7.1:-81853126	None:intergenic
GAGAGTGAAGATTTGAGTTT+TGG	0.216722	7.1:-81853171	None:intergenic
TTGAAAGGTGGTGTTGAATT+TGG	0.233566	7.1:+81854329	MS.gene021910:CDS
TCTTCATTTGTAAAGTCTTC+TGG	0.241882	7.1:-81854056	None:intergenic
ACAAAAGTTGACAATTTCTT+AGG	0.262126	7.1:-81853858	None:intergenic
GGAGTATATGAGATTGATTT+TGG	0.276059	7.1:+81854230	MS.gene021910:CDS
CCAATTTCCGAAAACTATTT+CGG	0.280907	7.1:+81853999	MS.gene021910:CDS
TTCTTCAATATTGTTCCATT+TGG	0.285958	7.1:-81853814	None:intergenic
TTGAACTGAATGATTGGTTT+TGG	0.292722	7.1:-81853252	None:intergenic
GATAATTGGTATGCAGAATT+AGG	0.304374	7.1:-81853030	None:intergenic
AAACAATCTTACCTGCTATA+TGG	0.318914	7.1:-81853215	None:intergenic
TGAACGGAATCCTTAACTTT+TGG	0.329162	7.1:-81853735	None:intergenic
AAGTGAGAGGAAGAGATAAT+TGG	0.338652	7.1:-81853044	None:intergenic
AACGAAACTCCGTCATCATT+TGG	0.340462	7.1:-81853276	None:intergenic
TCACTTTCTTAGACTTGAAT+TGG	0.344769	7.1:+81853061	MS.gene021910:CDS
TAGAAGAAAATACGTTCAAC+TGG	0.370556	7.1:-81853096	None:intergenic
ATATAGCAGGTAAGATTGTT+TGG	0.372054	7.1:+81853217	MS.gene021910:CDS
GTTGATAGAGGAATAACAAT+TGG	0.386783	7.1:+81854287	MS.gene021910:CDS
ATCTCACTCTCAAAACCATT+TGG	0.401328	7.1:-81853630	None:intergenic
TAGGGTGTGATTGTGAATTT+GGG	0.408902	7.1:-81853125	None:intergenic
TTTGGATTGAACTGAATGAT+TGG	0.409903	7.1:-81853258	None:intergenic
ACACACCATGCTGTTCTTGA+TGG	0.421878	7.1:+81853483	MS.gene021910:CDS
CAAGCTCACACATGAAGATA+TGG	0.424265	7.1:+81853767	MS.gene021910:CDS
TCTAGATATATGGAAATTGT+TGG	0.426599	7.1:+81854164	MS.gene021910:CDS
ACAAAAGTGTGTTGTCCAAA+TGG	0.432381	7.1:+81853799	MS.gene021910:CDS
ATTCAAGCAATAGTAGTTGC+AGG	0.433078	7.1:+81854194	MS.gene021910:CDS
TTTGAGTAGGGAAGTAATCA+AGG	0.453618	7.1:+81853605	MS.gene021910:CDS
GTTGCAGGGTCAACAAGGTT+TGG	0.459696	7.1:+81854209	MS.gene021910:CDS
GAAGACTTTACAAATGAAGA+TGG	0.516381	7.1:+81854059	MS.gene021910:CDS
GAAAGTAGAGATTTGAAAGG+TGG	0.519737	7.1:+81854317	MS.gene021910:CDS
AAATGGAACAATATTGAAGA+AGG	0.523989	7.1:+81853816	MS.gene021910:CDS
GAAGTAATCAAGGATCCAAA+TGG	0.526584	7.1:+81853615	MS.gene021910:CDS
CTATATGGAGAAAGTGTTGG+AGG	0.537643	7.1:-81853200	None:intergenic
CTGCTATATGGAGAAAGTGT+TGG	0.538862	7.1:-81853203	None:intergenic
CAACACTTTCTCCATATAGC+AGG	0.542968	7.1:+81853204	MS.gene021910:CDS
GAAACTACTTCAGTTGATAG+AGG	0.550153	7.1:+81854275	MS.gene021910:CDS
AAATGATGACGGAGTTTCGT+TGG	0.551389	7.1:+81853278	MS.gene021910:CDS
TATATGGAAATTGTTGGTGA+AGG	0.567977	7.1:+81854170	MS.gene021910:CDS
AGTTTCCTTCGATAAAATTG+TGG	0.567981	7.1:+81853326	MS.gene021910:CDS
ACAGAAAGTAGAGATTTGAA+AGG	0.576880	7.1:+81854314	MS.gene021910:CDS
TGTGATTGTGAATTTGGGAG+AGG	0.582568	7.1:-81853120	None:intergenic
GTGATTGTGAATTTGGGAGA+GGG	0.585407	7.1:-81853119	None:intergenic
TTCAAGTCTAAGAAAGTGAG+AGG	0.591765	7.1:-81853057	None:intergenic
GAATCTGTTGATTCTAAGTG+AGG	0.596592	7.1:-81853393	None:intergenic
CAGTTCAATCCAAATGATGA+CGG	0.611704	7.1:+81853267	MS.gene021910:CDS
CGAGATAAAGAAGCTTCTTG+TGG	0.621141	7.1:-81853360	None:intergenic
TAGTAGTTGCAGGGTCAACA+AGG	0.621931	7.1:+81854204	MS.gene021910:CDS
TTCAAGCAATAGTAGTTGCA+GGG	0.626780	7.1:+81854195	MS.gene021910:CDS
CAACCATGTTCATCAAAGCA+TGG	0.631200	7.1:+81853514	MS.gene021910:CDS
ATGGTGTGTGCTTATTCCAA+TGG	0.644576	7.1:-81853469	None:intergenic
TATATGGAGAAAGTGTTGGA+GGG	0.650855	7.1:-81853199	None:intergenic
AGACCATGCTTTGATGAACA+TGG	0.653845	7.1:-81853517	None:intergenic
AGAAGAAAATACGTTCAACT+GGG	0.676059	7.1:-81853095	None:intergenic
GAGCTTGAATGCGACTTGAA+CGG	0.705943	7.1:-81853751	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACAATTAAAAAAATGGATAA+GGG	+	chr7.1:81854113-81854132	MS.gene021910:CDS	15.0%
!!	TTATAGCACAATTAAAAAAA+TGG	+	chr7.1:81854106-81854125	MS.gene021910:CDS	15.0%
!!	CACAATTAAAAAAATGGATA+AGG	+	chr7.1:81854112-81854131	MS.gene021910:CDS	20.0%
!!!	TACATTGTTTTCTAGATATA+TGG	+	chr7.1:81854154-81854173	MS.gene021910:CDS	20.0%
!!!	TTTTTTTGAACCAAAAGTTA+AGG	+	chr7.1:81853725-81853744	MS.gene021910:CDS	20.0%
!	AAATGGAACAATATTGAAGA+AGG	+	chr7.1:81853816-81853835	MS.gene021910:CDS	25.0%
!	ACAAAAGTTGACAATTTCTT+AGG	-	chr7.1:81853861-81853880	None:intergenic	25.0%
!	TCTAGATATATGGAAATTGT+TGG	+	chr7.1:81854164-81854183	MS.gene021910:CDS	25.0%
!	TTCTTCAATATTGTTCCATT+TGG	-	chr7.1:81853817-81853836	None:intergenic	25.0%
!!	ACAATTTCCGAAATAGTTTT+CGG	-	chr7.1:81854009-81854028	None:intergenic	25.0%
!!	AGAGTGAGATCATAAATTTT+TGG	+	chr7.1:81853643-81853662	MS.gene021910:CDS	25.0%
!!!	ATAACCTTTTTTCCGAAAAA+CGG	+	chr7.1:81853441-81853460	MS.gene021910:CDS	25.0%
!!!	CAAAAACAGAAGTTTTGTTT+TGG	+	chr7.1:81853942-81853961	MS.gene021910:CDS	25.0%
!!!	TATGAGATTGATTTTGGTTT+TGG	+	chr7.1:81854236-81854255	MS.gene021910:CDS	25.0%
!!!	TTCATACCTTTTTTCATGAA+GGG	+	chr7.1:81854384-81854403	MS.gene021910:CDS	25.0%
!!!	TTTCATACCTTTTTTCATGA+AGG	+	chr7.1:81854383-81854402	MS.gene021910:CDS	25.0%
	AAACAATCTTACCTGCTATA+TGG	-	chr7.1:81853218-81853237	None:intergenic	30.0%
	ACAGAAAGTAGAGATTTGAA+AGG	+	chr7.1:81854314-81854333	MS.gene021910:CDS	30.0%
	AGAAGAAAATACGTTCAACT+GGG	-	chr7.1:81853098-81853117	None:intergenic	30.0%
	AGTTTCCTTCGATAAAATTG+TGG	+	chr7.1:81853326-81853345	MS.gene021910:CDS	30.0%
	ATATAGCAGGTAAGATTGTT+TGG	+	chr7.1:81853217-81853236	MS.gene021910:CDS	30.0%
	ATTACTTCCCTACTCAAAAA+GGG	-	chr7.1:81853603-81853622	None:intergenic	30.0%
	CCAATTTCCGAAAACTATTT+CGG	+	chr7.1:81853999-81854018	MS.gene021910:CDS	30.0%
	CTCAAAAAGGGTTTCAAAAA+AGG	-	chr7.1:81853591-81853610	None:intergenic	30.0%
	GAAGACTTTACAAATGAAGA+TGG	+	chr7.1:81854059-81854078	MS.gene021910:CDS	30.0%
	GATAATTGGTATGCAGAATT+AGG	-	chr7.1:81853033-81853052	None:intergenic	30.0%
	TAGAAGAAAATACGTTCAAC+TGG	-	chr7.1:81853099-81853118	None:intergenic	30.0%
	TCACTTTCTTAGACTTGAAT+TGG	+	chr7.1:81853061-81853080	MS.gene021910:CDS	30.0%
	TCTTCATTTGTAAAGTCTTC+TGG	-	chr7.1:81854059-81854078	None:intergenic	30.0%
	TTTGGATTGAACTGAATGAT+TGG	-	chr7.1:81853261-81853280	None:intergenic	30.0%
!	AAATAGTTTTCGGAAATTGG+TGG	-	chr7.1:81853999-81854018	None:intergenic	30.0%
!	AATAGTTTTCGGAAATTGGT+GGG	-	chr7.1:81853998-81854017	None:intergenic	30.0%
!	GTTGATAGAGGAATAACAAT+TGG	+	chr7.1:81854287-81854306	MS.gene021910:CDS	30.0%
!	TATATGGAAATTGTTGGTGA+AGG	+	chr7.1:81854170-81854189	MS.gene021910:CDS	30.0%
!!	AAAACCGTTTTTCGGAAAAA+AGG	-	chr7.1:81853448-81853467	None:intergenic	30.0%
!!	AATCTCAACACATTTTGATC+AGG	+	chr7.1:81853671-81853690	MS.gene021910:CDS	30.0%
!!	ATCTCAACACATTTTGATCA+GGG	+	chr7.1:81853672-81853691	MS.gene021910:CDS	30.0%
!!	GGAGTATATGAGATTGATTT+TGG	+	chr7.1:81854230-81854249	MS.gene021910:CDS	30.0%
!!	TTTTGCTTTTGCTATGCAAA+CGG	-	chr7.1:81853904-81853923	None:intergenic	30.0%
!!!	AAGATTTGAGTTTTGGAACA+AGG	-	chr7.1:81853167-81853186	None:intergenic	30.0%
!!!	AGATTGATTTTGGTTTTGGA+AGG	+	chr7.1:81854240-81854259	MS.gene021910:CDS	30.0%
!!!	AGGTTTTGAAAGAAGAAAGT+AGG	-	chr7.1:81853147-81853166	None:intergenic	30.0%
!!!	GGTTTTGAAAGAAGAAAGTA+GGG	-	chr7.1:81853146-81853165	None:intergenic	30.0%
!!!	TTGAACTGAATGATTGGTTT+TGG	-	chr7.1:81853255-81853274	None:intergenic	30.0%
!!!	TTTGAAACCCTTTTTGAGTA+GGG	+	chr7.1:81853593-81853612	MS.gene021910:CDS	30.0%
!!!	TTTTGAAACCCTTTTTGAGT+AGG	+	chr7.1:81853592-81853611	MS.gene021910:CDS	30.0%
	AAGTGAGAGGAAGAGATAAT+TGG	-	chr7.1:81853047-81853066	None:intergenic	35.0%
	ATCTCACTCTCAAAACCATT+TGG	-	chr7.1:81853633-81853652	None:intergenic	35.0%
	ATTCAAGCAATAGTAGTTGC+AGG	+	chr7.1:81854194-81854213	MS.gene021910:CDS	35.0%
	CAGTTCAATCCAAATGATGA+CGG	+	chr7.1:81853267-81853286	MS.gene021910:CDS	35.0%
	GAAAGTAGAGATTTGAAAGG+TGG	+	chr7.1:81854317-81854336	MS.gene021910:CDS	35.0%
	GAAGTAATCAAGGATCCAAA+TGG	+	chr7.1:81853615-81853634	MS.gene021910:CDS	35.0%
	GATTACTTCCCTACTCAAAA+AGG	-	chr7.1:81853604-81853623	None:intergenic	35.0%
	GCATAACCCTTCATGAAAAA+AGG	-	chr7.1:81854393-81854412	None:intergenic	35.0%
	TAGGGTGTGATTGTGAATTT+GGG	-	chr7.1:81853128-81853147	None:intergenic	35.0%
	TTCAAGCAATAGTAGTTGCA+GGG	+	chr7.1:81854195-81854214	MS.gene021910:CDS	35.0%
	TTCAAGTCTAAGAAAGTGAG+AGG	-	chr7.1:81853060-81853079	None:intergenic	35.0%
	TTTGAGTAGGGAAGTAATCA+AGG	+	chr7.1:81853605-81853624	MS.gene021910:CDS	35.0%
!	ACAAAAGTGTGTTGTCCAAA+TGG	+	chr7.1:81853799-81853818	MS.gene021910:CDS	35.0%
!	ATGGATAAGGGTTTTCTTGA+TGG	+	chr7.1:81854125-81854144	MS.gene021910:CDS	35.0%
!	ATTTTCCATCAAGAACAGCA+TGG	-	chr7.1:81853491-81853510	None:intergenic	35.0%
!	CCGAAATAGTTTTCGGAAAT+TGG	-	chr7.1:81854002-81854021	None:intergenic	35.0%
!	TGAACGGAATCCTTAACTTT+TGG	-	chr7.1:81853738-81853757	None:intergenic	35.0%
!	TTGAAAGGTGGTGTTGAATT+TGG	+	chr7.1:81854329-81854348	MS.gene021910:CDS	35.0%
!!	CCAATGGAAAAACCGTTTTT+CGG	-	chr7.1:81853456-81853475	None:intergenic	35.0%
!!	GAAACTACTTCAGTTGATAG+AGG	+	chr7.1:81854275-81854294	MS.gene021910:CDS	35.0%
!!	GAATCTGTTGATTCTAAGTG+AGG	-	chr7.1:81853396-81853415	None:intergenic	35.0%
!!	GAGAGTGAAGATTTGAGTTT+TGG	-	chr7.1:81853174-81853193	None:intergenic	35.0%
!!	TATATGGAGAAAGTGTTGGA+GGG	-	chr7.1:81853202-81853221	None:intergenic	35.0%
!!!	ATTGGTTTTGGAGAATCAGA+AGG	-	chr7.1:81853243-81853262	None:intergenic	35.0%
!!!	GTTTTGTTTTGGTTTTGCAG+TGG	+	chr7.1:81853953-81853972	MS.gene021910:CDS	35.0%
	AACGAAACTCCGTCATCATT+TGG	-	chr7.1:81853279-81853298	None:intergenic	40.0%
	AGACCATGCTTTGATGAACA+TGG	-	chr7.1:81853520-81853539	None:intergenic	40.0%
	ATGGTGTGTGCTTATTCCAA+TGG	-	chr7.1:81853472-81853491	None:intergenic	40.0%
	CAACACTTTCTCCATATAGC+AGG	+	chr7.1:81853204-81853223	MS.gene021910:CDS	40.0%
	CAACCATGTTCATCAAAGCA+TGG	+	chr7.1:81853514-81853533	MS.gene021910:CDS	40.0%
	CAAGCTCACACATGAAGATA+TGG	+	chr7.1:81853767-81853786	MS.gene021910:CDS	40.0%
	CGAGATAAAGAAGCTTCTTG+TGG	-	chr7.1:81853363-81853382	None:intergenic	40.0%
	GTAGGGTGTGATTGTGAATT+TGG	-	chr7.1:81853129-81853148	None:intergenic	40.0%
	GTGATTGTGAATTTGGGAGA+GGG	-	chr7.1:81853122-81853141	None:intergenic	40.0%
	TGTGATTGTGAATTTGGGAG+AGG	-	chr7.1:81853123-81853142	None:intergenic	40.0%
!	CCGAAAAACGGTTTTTCCAT+TGG	+	chr7.1:81853453-81853472	MS.gene021910:CDS	40.0%
!	CTGCTATATGGAGAAAGTGT+TGG	-	chr7.1:81853206-81853225	None:intergenic	40.0%
!	CTGCTCCACAATTTTATCGA+AGG	-	chr7.1:81853334-81853353	None:intergenic	40.0%
!!	AAATGATGACGGAGTTTCGT+TGG	+	chr7.1:81853278-81853297	MS.gene021910:CDS	40.0%
!!	CTATATGGAGAAAGTGTTGG+AGG	-	chr7.1:81853203-81853222	None:intergenic	40.0%
!!	GAAGTAGTTTCCACTTTTGC+AGG	-	chr7.1:81854266-81854285	None:intergenic	40.0%
	ACACACCATGCTGTTCTTGA+TGG	+	chr7.1:81853483-81853502	MS.gene021910:CDS	45.0%
	GAGCTTGAATGCGACTTGAA+CGG	-	chr7.1:81853754-81853773	None:intergenic	45.0%
	TAGTAGTTGCAGGGTCAACA+AGG	+	chr7.1:81854204-81854223	MS.gene021910:CDS	45.0%
!!	TTTTGGAAGGCCTGCAAAAG+TGG	+	chr7.1:81854253-81854272	MS.gene021910:CDS	45.0%
	GTTGCAGGGTCAACAAGGTT+TGG	+	chr7.1:81854209-81854228	MS.gene021910:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.1	gene	81852979	81854421	81852979	ID=MS.gene021910
chr7.1	mRNA	81852979	81854421	81852979	ID=MS.gene021910.t1;Parent=MS.gene021910
chr7.1	exon	81852979	81854421	81852979	ID=MS.gene021910.t1.exon1;Parent=MS.gene021910.t1
chr7.1	CDS	81852979	81854421	81852979	ID=cds.MS.gene021910.t1;Parent=MS.gene021910.t1

Gene Sequence

>MS.gene021910

ATGGCTGCTGCAAACAATCACATCAAAATTCATGAAGAATGTAAAGTTTCTCCTAATTCTGCATACCAATTATCTCTTCCTCTCACTTTCTTAGACTTGAATTGGCTAAGATTTCACCCAGTTGAACGTATTTTCTTCTACCCTCTCCCAAATTCACAATCACACCCTACTTTCTTCTTTCAAAACCTTGTTCCAAAACTCAAATCTTCACTCTCTTTAACCCTCCAACACTTTCTCCATATAGCAGGTAAGATTGTTTGGCCTTCTGATTCTCCAAAACCAATCATTCAGTTCAATCCAAATGATGACGGAGTTTCGTTGGTCTTAGCACAATATGATGACGATGTAGTTTCCTTCGATAAAATTGTGGAGCAGAATTCACCACAAGAAGCTTCTTTATCTCGTTCTTTTGTACCTCACTTAGAATCAACAGATTCTTTTGCTTCTATCATTTCAATTCAGATAACCTTTTTTCCGAAAAACGGTTTTTCCATTGGAATAAGCACACACCATGCTGTTCTTGATGGAAAATCTTCAACCATGTTCATCAAAGCATGGTCTTCTATATGTAAATCTCTTGAAGAAGAAACACAATCATCAAATTTAGAGCCTTTTTTGAAACCCTTTTTGAGTAGGGAAGTAATCAAGGATCCAAATGGTTTTGAGAGTGAGATCATAAATTTTTGGAACAAAATCTCAACACATTTTGATCAGGGCAACGTGAGAAGCTTAAAGATTATGTCAAATTTTTTTGAACCAAAAGTTAAGGATTCCGTTCAAGTCGCATTCAAGCTCACACATGAAGATATGGAGAAATTAAACAAAAGTGTGTTGTCCAAATGGAACAATATTGAAGAAGGATCACAAGAACAAGAACTACCTAAGAAATTGTCAACTTTTGTTCTTACATGTTCTTATGTTTCCGTTTGCATAGCAAAAGCAAAACAACAATCTGAAAGCAATCAAAAACAGAAGTTTTGTTTTGGTTTTGCAGTGGATATCAGATCAAGATTAGACCCACCAATTTCCGAAAACTATTTCGGAAATTGTGTAATTAGTCATATAATTAATATTGAGCCAGAAGACTTTACAAATGAAGATGGAGTTGTGATTGTTGCAAAGAAAATTTATAGCACAATTAAAAAAATGGATAAGGGTTTTCTTGATGGTGTAGATACATTGTTTTCTAGATATATGGAAATTGTTGGTGAAGGAATTCAAGCAATAGTAGTTGCAGGGTCAACAAGGTTTGGAGTATATGAGATTGATTTTGGTTTTGGAAGGCCTGCAAAAGTGGAAACTACTTCAGTTGATAGAGGAATAACAATTGGATTAACAGAAAGTAGAGATTTGAAAGGTGGTGTTGAATTTGGACTTGTTCTTGATAAGAATGTGATGAATTTTTTTCATACCTTTTTTCATGAAGGGTTATGCTTTGATTGA

Protein sequence

>MS.gene021910.t1

MAAANNHIKIHEECKVSPNSAYQLSLPLTFLDLNWLRFHPVERIFFYPLPNSQSHPTFFFQNLVPKLKSSLSLTLQHFLHIAGKIVWPSDSPKPIIQFNPNDDGVSLVLAQYDDDVVSFDKIVEQNSPQEASLSRSFVPHLESTDSFASIISIQITFFPKNGFSIGISTHHAVLDGKSSTMFIKAWSSICKSLEEETQSSNLEPFLKPFLSREVIKDPNGFESEIINFWNKISTHFDQGNVRSLKIMSNFFEPKVKDSVQVAFKLTHEDMEKLNKSVLSKWNNIEEGSQEQELPKKLSTFVLTCSYVSVCIAKAKQQSESNQKQKFCFGFAVDIRSRLDPPISENYFGNCVISHIINIEPEDFTNEDGVVIVAKKIYSTIKKMDKGFLDGVDTLFSRYMEIVGEGIQAIVVAGSTRFGVYEIDFGFGRPAKVETTSVDRGITIGLTESRDLKGGVEFGLVLDKNVMNFFHTFFHEGLCFD