AlfalfaGEDB | MsG0880043287.01

M. sativa cultivar ZhongmuNo.1 / MsG0880043287.01

KEGG: -
GO: -
PFAM: PF00168

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880043287.01.T01	XP_013444919.1	96.237	186	6	1	1	186	1	185	3.92E-125	360

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880043287.01.T01	A0A072TN82	96.237	186	6	1	1	186	1	185	1.87e-125	360

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048204.01	MsG0880043287.01	0.817767	2.780490e-52	2.043275e-49
MsG0080048205.01	MsG0880043287.01	0.848112	7.540832e-60	1.369190e-56
MsG0080048207.01	MsG0880043287.01	0.830241	3.280563e-55	3.436908e-52
MsG0080048210.01	MsG0880043287.01	0.806457	8.151522e-50	4.426635e-47
MsG0080048830.01	MsG0880043287.01	0.805830	1.104666e-49	5.903478e-47
MsG0080048915.01	MsG0880043287.01	0.802719	4.908569e-49	2.421820e-46
MsG0080048982.01	MsG0880043287.01	0.809007	2.340725e-50	1.358519e-47
MsG0180000157.01	MsG0880043287.01	0.815186	1.051540e-51	7.199556e-49
MsG0180000220.01	MsG0880043287.01	0.809498	1.836812e-50	1.080156e-47
MsG0180000267.01	MsG0880043287.01	0.809372	1.954911e-50	1.145801e-47
MsG0180000271.01	MsG0880043287.01	0.831156	1.958014e-55	2.107030e-52
MsG0180000391.01	MsG0880043287.01	0.807776	4.283922e-50	2.407165e-47
MsG0180000526.01	MsG0880043287.01	0.800092	1.695165e-48	7.824048e-46
MsG0180000550.01	MsG0880043287.01	0.804819	1.798662e-49	9.366307e-47
MsG0180000673.01	MsG0880043287.01	0.805567	1.254347e-49	6.657981e-47
MsG0180001312.01	MsG0880043287.01	0.807465	4.988682e-50	2.780656e-47
MsG0180001663.01	MsG0880043287.01	0.858111	1.030963e-62	2.602472e-59
MsG0180001712.01	MsG0880043287.01	0.829741	4.343721e-55	4.485809e-52
MsG0180001904.01	MsG0880043287.01	0.819224	1.299259e-52	9.938601e-50
MsG0180001921.01	MsG0880043287.01	0.824192	9.222028e-54	8.111303e-51
MsG0180001922.01	MsG0880043287.01	0.815051	1.126765e-51	7.686379e-49
MsG0180002955.01	MsG0880043287.01	0.803401	3.548320e-49	1.781454e-46
MsG0180004085.01	MsG0880043287.01	0.804363	2.239164e-49	1.152310e-46
MsG0180004449.01	MsG0880043287.01	0.803512	3.365421e-49	1.694479e-46
MsG0180004599.01	MsG0880043287.01	0.800433	1.444357e-48	6.724636e-46
MsG0180004600.01	MsG0880043287.01	0.812620	3.868053e-51	2.471218e-48
MsG0180004824.01	MsG0880043287.01	0.814163	1.771540e-51	1.179862e-48
MsG0180005160.01	MsG0880043287.01	0.850993	1.185251e-60	2.364503e-57
MsG0180005354.01	MsG0880043287.01	0.804611	1.987590e-49	1.029390e-46
MsG0180005743.01	MsG0880043287.01	0.814408	1.564584e-51	1.049014e-48
MsG0180005773.01	MsG0880043287.01	0.816083	6.637810e-52	4.658267e-49
MsG0180005813.01	MsG0880043287.01	0.807817	4.199575e-50	2.362263e-47
MsG0180006016.01	MsG0880043287.01	0.839486	1.539713e-57	2.129454e-54
MsG0180006138.01	MsG0880043287.01	0.849720	2.698579e-60	5.162795e-57
MsG0280006356.01	MsG0880043287.01	0.820379	7.075805e-53	5.590017e-50
MsG0780040442.01	MsG0880043287.01	0.815206	1.040828e-51	7.130097e-49
MsG0780040679.01	MsG0880043287.01	0.826556	2.543240e-54	2.393024e-51
MsG0780040758.01	MsG0880043287.01	0.828911	6.908202e-55	6.961094e-52
MsG0880042053.01	MsG0880043287.01	0.802859	4.593602e-49	2.274434e-46
MsG0880042314.01	MsG0880043287.01	0.800818	1.205615e-48	5.667903e-46
MsG0880042404.01	MsG0880043287.01	0.801446	8.971865e-49	4.285485e-46
MsG0880042611.01	MsG0880043287.01	0.820290	7.414895e-53	5.842945e-50
MsG0880042743.01	MsG0880043287.01	0.826178	3.128693e-54	2.912539e-51
MsG0880042843.01	MsG0880043287.01	0.812176	4.836804e-51	3.053671e-48
MsG0880042965.01	MsG0880043287.01	0.804067	2.581200e-49	1.318308e-46
MsG0880042972.01	MsG0880043287.01	0.807182	5.728516e-50	3.169513e-47
MsG0880043059.01	MsG0880043287.01	0.815770	7.795983e-52	5.424504e-49
MsG0880043172.01	MsG0880043287.01	0.818126	2.306340e-52	1.711585e-49
MsG0880043287.01	MsG0880043288.01	0.842100	3.177688e-58	4.767282e-55
MsG0880043287.01	MsG0880043835.01	0.801141	1.035526e-48	4.908568e-46
MsG0880043287.01	MsG0880044062.01	-0.804279	2.330826e-49	1.196886e-46
MsG0880043287.01	MsG0880044346.01	0.806789	6.935830e-50	3.798514e-47
MsG0880043287.01	MsG0880045106.01	0.825630	4.221972e-54	3.869442e-51
MsG0880043287.01	MsG0880045290.01	0.804120	2.515637e-49	1.286544e-46
MsG0880043287.01	MsG0880045926.01	0.802475	5.513595e-49	2.703351e-46
MsG0880043287.01	MsG0880046058.01	0.809667	1.689599e-50	9.981149e-48
MsG0880043287.01	MsG0880046244.01	0.849533	3.041860e-60	5.783897e-57
MsG0880043287.01	MsG0880046329.01	0.811274	7.600632e-51	4.684298e-48
MsG0880043287.01	MsG0880046733.01	0.806551	7.784656e-50	4.237677e-47
MsG0880043287.01	MsG0880047019.01	0.842178	3.031093e-58	4.557987e-55
MsG0880043287.01	MsG0880047143.01	0.813589	2.371168e-51	1.554858e-48
MsG0880043287.01	MsG0880047425.01	0.811960	5.391518e-51	3.383863e-48
MsG0880043287.01	MsG0880047444.01	0.800307	1.532401e-48	7.112023e-46
MsG0280010739.01	MsG0880043287.01	0.803132	4.033886e-49	2.011192e-46
MsG0280010784.01	MsG0880043287.01	0.844601	6.835225e-59	1.109171e-55
MsG0280011024.01	MsG0880043287.01	0.803238	3.835656e-49	1.917572e-46
MsG0280011131.01	MsG0880043287.01	0.817959	2.516178e-52	1.858712e-49
MsG0280011191.01	MsG0880043287.01	0.810322	1.220804e-50	7.336222e-48
MsG0280011235.01	MsG0880043287.01	0.822304	2.544279e-53	2.121504e-50
MsG0280011410.01	MsG0880043287.01	0.802076	6.659169e-49	3.232049e-46
MsG0280011446.01	MsG0880043287.01	0.827465	1.541368e-54	1.489278e-51
MsG0380011754.01	MsG0880043287.01	0.834804	2.424465e-56	2.908649e-53
MsG0380011895.01	MsG0880043287.01	0.821187	4.612788e-53	3.726874e-50
MsG0380013047.01	MsG0880043287.01	0.839214	1.811521e-57	2.484609e-54
MsG0380013436.01	MsG0880043287.01	0.837828	4.128386e-57	5.427904e-54
MsG0380014573.01	MsG0880043287.01	0.801058	1.077123e-48	5.095143e-46
MsG0380014770.01	MsG0880043287.01	0.809244	2.082002e-50	1.216160e-47
MsG0680030720.01	MsG0880043287.01	0.802986	4.324628e-49	2.148075e-46
MsG0680031459.01	MsG0880043287.01	0.806914	6.526815e-50	3.586148e-47
MsG0680031538.01	MsG0880043287.01	0.806904	6.559303e-50	3.602985e-47
MsG0680032380.01	MsG0880043287.01	0.808215	3.455389e-50	1.964242e-47
MsG0680034190.01	MsG0880043287.01	0.814410	1.562437e-51	1.047672e-48
MsG0680034219.01	MsG0880043287.01	0.814718	1.335753e-51	9.030892e-49
MsG0680035278.01	MsG0880043287.01	0.810239	1.272590e-50	7.630832e-48
MsG0680035460.01	MsG0880043287.01	0.806813	6.853762e-50	3.756137e-47
MsG0680035582.01	MsG0880043287.01	0.821958	3.061694e-53	2.527619e-50
MsG0480018635.01	MsG0880043287.01	0.826464	2.674556e-54	2.510052e-51
MsG0480019289.01	MsG0880043287.01	0.808343	3.245197e-50	1.850987e-47
MsG0480020445.01	MsG0880043287.01	0.819961	8.820928e-53	6.888091e-50
MsG0480020487.01	MsG0880043287.01	0.805923	1.055679e-49	5.655236e-47
MsG0480020886.01	MsG0880043287.01	0.801694	7.977099e-49	3.834152e-46
MsG0480021959.01	MsG0880043287.01	0.809520	1.817313e-50	1.069316e-47
MsG0480022343.01	MsG0880043287.01	0.822447	2.356969e-53	1.973372e-50
MsG0480022575.01	MsG0880043287.01	0.808227	3.435362e-50	1.953442e-47
MsG0480022933.01	MsG0880043287.01	0.803722	3.043410e-49	1.540571e-46
MsG0480023088.01	MsG0880043287.01	0.803304	3.715987e-49	1.860888e-46
MsG0480023224.01	MsG0880043287.01	0.819069	1.409317e-52	1.073470e-49
MsG0480023248.01	MsG0880043287.01	0.815948	7.114547e-52	4.974104e-49
MsG0480023517.01	MsG0880043287.01	0.813305	2.737603e-51	1.781297e-48
MsG0480023554.01	MsG0880043287.01	0.803891	2.807605e-49	1.427491e-46
MsG0480023638.01	MsG0880043287.01	0.809275	2.050351e-50	1.198632e-47
MsG0580024073.01	MsG0880043287.01	0.801070	1.070996e-48	5.067605e-46
MsG0580024114.01	MsG0880043287.01	0.827924	1.195953e-54	1.170997e-51
MsG0580024130.01	MsG0880043287.01	0.860559	1.898321e-63	5.210770e-60
MsG0580025009.01	MsG0880043287.01	0.812808	3.517946e-51	2.258517e-48
MsG0580025026.01	MsG0880043287.01	0.807644	4.569815e-50	2.558923e-47
MsG0580025278.01	MsG0880043287.01	0.830272	3.224406e-55	3.380889e-52
MsG0580025328.01	MsG0880043287.01	0.842758	2.126304e-58	3.256028e-55
MsG0580025453.01	MsG0880043287.01	0.823360	1.444112e-53	1.240598e-50
MsG0380015145.01	MsG0880043287.01	0.805736	1.156090e-49	6.163714e-47
MsG0380015149.01	MsG0880043287.01	0.809352	1.974083e-50	1.156455e-47
MsG0380015931.01	MsG0880043287.01	0.828845	7.167500e-55	7.208360e-52
MsG0380015986.01	MsG0880043287.01	0.822884	1.864902e-53	1.580858e-50
MsG0380016182.01	MsG0880043287.01	0.811729	6.050889e-51	3.774560e-48
MsG0380016581.01	MsG0880043287.01	0.840942	6.414106e-58	9.280215e-55
MsG0380016624.01	MsG0880043287.01	0.846715	1.825321e-59	3.170278e-56
MsG0380016859.01	MsG0880043287.01	0.819447	1.156033e-52	8.898349e-50
MsG0380017286.01	MsG0880043287.01	0.841826	3.753291e-58	5.582225e-55
MsG0380017403.01	MsG0880043287.01	0.806515	7.923652e-50	4.309235e-47
MsG0380017551.01	MsG0880043287.01	-0.807283	5.452616e-50	3.024852e-47
MsG0480018321.01	MsG0880043287.01	0.801292	9.643660e-49	4.588667e-46
MsG0580026596.01	MsG0880043287.01	0.808668	2.765501e-50	1.590722e-47
MsG0580027034.01	MsG0880043287.01	0.839412	1.609586e-57	2.221150e-54
MsG0580027228.01	MsG0880043287.01	0.803141	4.015864e-49	2.002709e-46
MsG0580028291.01	MsG0880043287.01	0.801104	1.054112e-48	4.992059e-46
MsG0580028969.01	MsG0880043287.01	0.805176	1.515004e-49	7.961408e-47
MsG0580029629.01	MsG0880043287.01	0.801468	8.878103e-49	4.243018e-46
MsG0580029758.01	MsG0880043287.01	0.868014	8.941787e-66	3.185625e-62
MsG0680030629.01	MsG0880043287.01	0.804819	1.798946e-49	9.367743e-47
MsG0280006583.01	MsG0880043287.01	0.808545	2.938929e-50	1.685099e-47
MsG0280006595.01	MsG0880043287.01	0.816856	4.455994e-52	3.193855e-49
MsG0280006708.01	MsG0880043287.01	0.823289	1.500310e-53	1.286379e-50
MsG0280007547.01	MsG0880043287.01	0.803474	3.426607e-49	1.723531e-46
MsG0280007585.01	MsG0880043287.01	0.806712	7.200206e-50	3.935533e-47
MsG0280007691.01	MsG0880043287.01	0.808122	3.616828e-50	2.050896e-47
MsG0280007714.01	MsG0880043287.01	0.826925	2.075949e-54	1.974441e-51
MsG0280008073.01	MsG0880043287.01	0.822689	2.071112e-53	1.745967e-50
MsG0280008295.01	MsG0880043287.01	0.808416	3.130676e-50	1.789039e-47
MsG0280009024.01	MsG0880043287.01	0.825853	3.737940e-54	3.447872e-51
MsG0280009235.01	MsG0880043287.01	0.819254	1.279194e-52	9.793531e-50
MsG0280009598.01	MsG0880043287.01	0.808592	2.870667e-50	1.647963e-47
MsG0280010416.01	MsG0880043287.01	0.811398	7.143449e-51	4.417239e-48
MsG0680035844.01	MsG0880043287.01	0.830063	3.625378e-55	3.778331e-52
MsG0780035958.01	MsG0880043287.01	0.845150	4.858025e-59	8.020815e-56
MsG0780036289.01	MsG0880043287.01	0.822268	2.594295e-53	2.160942e-50
MsG0780037512.01	MsG0880043287.01	0.814943	1.190646e-51	8.098494e-49
MsG0780038092.01	MsG0880043287.01	0.814482	1.506569e-51	1.012128e-48
MsG0780038231.01	MsG0880043287.01	0.805250	1.461942e-49	7.696780e-47
MsG0780038833.01	MsG0880043287.01	0.808931	2.429886e-50	1.407380e-47
MsG0780038836.01	MsG0880043287.01	0.809244	2.082110e-50	1.216219e-47
MsG0780038921.01	MsG0880043287.01	0.811591	6.484116e-51	4.029814e-48
MsG0780038930.01	MsG0880043287.01	0.810781	9.716124e-51	5.910847e-48
MsG0780039143.01	MsG0880043287.01	0.829251	5.714775e-55	5.817597e-52
MsG0780039405.01	MsG0880043287.01	0.834679	2.607822e-56	3.116776e-53
MsG0780039875.01	MsG0880043287.01	0.837281	5.700528e-57	7.368854e-54
MsG0780039900.01	MsG0880043287.01	0.801638	8.193499e-49	3.932595e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880043287.01.T01	MTR_8g432480	96.237	186	6	1	1	186	1	185	4.75e-129	360
MsG0880043287.01.T01	MTR_8g432440	54.494	178	57	6	7	167	5	175	2.04e-53	168
MsG0880043287.01.T01	MTR_8g432420	54.494	178	57	6	7	167	5	175	2.04e-53	168
MsG0880043287.01.T01	MTR_8g432460	54.237	177	60	5	7	168	5	175	4.10e-52	165
MsG0880043287.01.T01	MTR_8g432450	51.648	182	57	5	7	167	5	176	1.54e-50	161
MsG0880043287.01.T01	MTR_8g432470	51.977	177	63	5	7	167	5	175	3.41e-50	160
MsG0880043287.01.T01	MTR_8g432490	52.273	176	63	5	7	167	5	174	3.39e-49	157
MsG0880043287.01.T01	MTR_3g064780	51.977	177	64	5	7	168	5	175	1.72e-48	158
MsG0880043287.01.T01	MTR_8g432370	37.209	129	74	4	7	131	2	127	1.20e-21	87.4
MsG0880043287.01.T01	MTR_8g432400	38.281	128	75	3	7	131	2	128	2.93e-21	86.3
MsG0880043287.01.T01	MTR_8g432390	38.462	130	72	5	7	131	2	128	8.94e-21	85.1
MsG0880043287.01.T01	MTR_8g432350	36.923	130	74	5	7	131	2	128	6.36e-20	82.8
MsG0880043287.01.T01	MTR_7g076000	37.059	170	86	9	7	168	2	158	1.41e-18	79.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 34 sgRNAs with CRISPR-Local

Find 51 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTCATTGGGATTCCAGTTT+TGG	0.209973	8:-22000189	MsG0880043287.01.T01:CDS
TTAGAAATCACCATTATTTC+CGG	0.251148	8:-22000647	MsG0880043287.01.T01:CDS
AAAATGAGGGTTTACTTTCA+TGG	0.303350	8:-22000526	MsG0880043287.01.T01:CDS
GAGTTATGGGTTGAGGGATT+GGG	0.319102	8:-22000342	MsG0880043287.01.T01:CDS
TGAGTTATGGGTTGAGGGAT+TGG	0.329761	8:-22000343	MsG0880043287.01.T01:CDS
AATTCAAATCATGTTGTCAT+TGG	0.330631	8:-22000203	MsG0880043287.01.T01:CDS
ATGTTCAAACTTTGAGTTAT+GGG	0.393724	8:-22000355	MsG0880043287.01.T01:CDS
AGTGGCTAGGATAGCCCTTT+CGG	0.395513	8:-22000411	MsG0880043287.01.T01:CDS
ATTCAAATCATGTTGTCATT+GGG	0.399832	8:-22000202	MsG0880043287.01.T01:CDS
AACTTTGAGTTATGGGTTGA+GGG	0.424777	8:-22000348	MsG0880043287.01.T01:CDS
GATGTTCAAACTTTGAGTTA+TGG	0.428751	8:-22000356	MsG0880043287.01.T01:CDS
TATTGAGGATGTGGGGTTGA+AGG	0.431275	8:-22000237	MsG0880043287.01.T01:CDS
AAACTTTGAGTTATGGGTTG+AGG	0.441165	8:-22000349	MsG0880043287.01.T01:CDS
AGAACAAGGTATTGAGGATG+TGG	0.474654	8:-22000246	MsG0880043287.01.T01:CDS
TGCAAAATCAGTGACGTTTG+AGG	0.499980	8:-22000471	MsG0880043287.01.T01:CDS
TGAGGATGTGGGGTTGAAGG+TGG	0.512663	8:-22000234	MsG0880043287.01.T01:CDS
TACAAAGGAGCTCGTCCCAT+TGG	0.515512	8:-22000434	MsG0880043287.01.T01:CDS
AAGTGTTGATCGAAATTCAA+AGG	0.521135	8:-22000615	MsG0880043287.01.T01:CDS
GCTATCCTAGCCACTCCAAT+GGG	0.521541	8:+22000419	None:intergenic
GAACAAGGTATTGAGGATGT+GGG	0.522715	8:-22000245	MsG0880043287.01.T01:CDS
GGTTGAGGGATTGGGATGGT+AGG	0.532351	8:-22000334	MsG0880043287.01.T01:CDS
GGCTATCCTAGCCACTCCAA+TGG	0.540754	8:+22000418	None:intergenic
AGTGTTGATCGAAATTCAAA+GGG	0.547290	8:-22000614	MsG0880043287.01.T01:CDS
GTCACCAAGAAAATCCGAAA+GGG	0.572767	8:+22000397	None:intergenic
GTGATTTCTAATGTGCGTGC+TGG	0.574354	8:+22000659	None:intergenic
GTGAGAAGGGTGACACAAGA+AGG	0.595191	8:-22000287	MsG0880043287.01.T01:CDS
TATGGGTTGAGGGATTGGGA+TGG	0.614237	8:-22000338	MsG0880043287.01.T01:CDS
AACAAGGTATTGAGGATGTG+GGG	0.625303	8:-22000244	MsG0880043287.01.T01:CDS
AAAATGGTGAAGGAAAATGA+GGG	0.646639	8:-22000539	MsG0880043287.01.T01:CDS
CTCGTCCCATTGGAGTGGCT+AGG	0.651174	8:-22000424	MsG0880043287.01.T01:CDS
GTACAATGCAAGAAGTACAA+AGG	0.653282	8:-22000449	MsG0880043287.01.T01:CDS
CGTCACCAAGAAAATCCGAA+AGG	0.654815	8:+22000396	None:intergenic
AGGAGCTCGTCCCATTGGAG+TGG	0.656408	8:-22000429	MsG0880043287.01.T01:CDS
TATTTATGTTGTTGTTCGTG+CGG	0.668109	8:-22000585	MsG0880043287.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATTAATTTTAGTGTGAGAA+GGG	-	Chr8:22000510-22000529	MsG0880043287.01.T01:CDS	20.0%
!!!	TTATTAATTTTAGTGTGAGA+AGG	-	Chr8:22000509-22000528	MsG0880043287.01.T01:CDS	20.0%
!	AATTCAAATCATGTTGTCAT+TGG	-	Chr8:22000607-22000626	MsG0880043287.01.T01:CDS	25.0%
!	ATTCAAATCATGTTGTCATT+GGG	-	Chr8:22000608-22000627	MsG0880043287.01.T01:CDS	25.0%
!	TTAGAAATCACCATTATTTC+CGG	-	Chr8:22000163-22000182	MsG0880043287.01.T01:CDS	25.0%
!!	ATGTTCAAACTTTGAGTTAT+GGG	-	Chr8:22000455-22000474	MsG0880043287.01.T01:CDS	25.0%
!!!	TTGGGTTTTTTGTTTCTTTT+GGG	-	Chr8:22000640-22000659	MsG0880043287.01.T01:CDS	25.0%
!!!	TTTGGGTTTTTTGTTTCTTT+TGG	-	Chr8:22000639-22000658	MsG0880043287.01.T01:CDS	25.0%
	AAAAATGGTGAAGGAAAATG+AGG	-	Chr8:22000270-22000289	MsG0880043287.01.T01:CDS	30.0%
	AAAATGAGGGTTTACTTTCA+TGG	-	Chr8:22000284-22000303	MsG0880043287.01.T01:CDS	30.0%
	AAAATGGTGAAGGAAAATGA+GGG	-	Chr8:22000271-22000290	MsG0880043287.01.T01:CDS	30.0%
	AGAAACAAAAAACCCAAAAC+TGG	+	Chr8:22000637-22000656	None:intergenic	30.0%
	TTGTGTGTAGAAAAAGAACA+AGG	-	Chr8:22000550-22000569	MsG0880043287.01.T01:CDS	30.0%
!	ATCAACACTTATGTTTTGTC+CGG	+	Chr8:22000185-22000204	None:intergenic	30.0%
!	GATGTTCAAACTTTGAGTTA+TGG	-	Chr8:22000454-22000473	MsG0880043287.01.T01:CDS	30.0%
!	TATGTTTTGTCCGGAAATAA+TGG	+	Chr8:22000176-22000195	None:intergenic	30.0%
!	TATTTATGTTGTTGTTCGTG+CGG	-	Chr8:22000225-22000244	MsG0880043287.01.T01:CDS	30.0%
!!	AAGTGTTGATCGAAATTCAA+AGG	-	Chr8:22000195-22000214	MsG0880043287.01.T01:CDS	30.0%
!!	AGAAAAAGAACAAGGTATTG+AGG	-	Chr8:22000558-22000577	MsG0880043287.01.T01:CDS	30.0%
!!	AGTGTTGATCGAAATTCAAA+GGG	-	Chr8:22000196-22000215	MsG0880043287.01.T01:CDS	30.0%
!	AAACTTTGAGTTATGGGTTG+AGG	-	Chr8:22000461-22000480	MsG0880043287.01.T01:CDS	35.0%
!	AACTTTGAGTTATGGGTTGA+GGG	-	Chr8:22000462-22000481	MsG0880043287.01.T01:CDS	35.0%
!	GTACAATGCAAGAAGTACAA+AGG	-	Chr8:22000361-22000380	MsG0880043287.01.T01:CDS	35.0%
	CAACTCTTGCACGACAAAAA+TGG	-	Chr8:22000255-22000274	MsG0880043287.01.T01:CDS	40.0%
	GATTGGGATGGTAGGAAAAA+TGG	-	Chr8:22000484-22000503	MsG0880043287.01.T01:CDS	40.0%
	GTCACCAAGAAAATCCGAAA+GGG	+	Chr8:22000416-22000435	None:intergenic	40.0%
	TGCAAAATCAGTGACGTTTG+AGG	-	Chr8:22000339-22000358	MsG0880043287.01.T01:CDS	40.0%
	TTGCACGACAAAAATGGTGA+AGG	-	Chr8:22000261-22000280	MsG0880043287.01.T01:CDS	40.0%
!	ATAGCCCTTTCGGATTTTCT+TGG	-	Chr8:22000409-22000428	MsG0880043287.01.T01:CDS	40.0%
!	GTCATTGGGATTCCAGTTTT+GGG	-	Chr8:22000622-22000641	MsG0880043287.01.T01:CDS	40.0%
!	TGTCATTGGGATTCCAGTTT+TGG	-	Chr8:22000621-22000640	MsG0880043287.01.T01:CDS	40.0%
!!	AACAAGGTATTGAGGATGTG+GGG	-	Chr8:22000566-22000585	MsG0880043287.01.T01:CDS	40.0%
!!	AGAACAAGGTATTGAGGATG+TGG	-	Chr8:22000564-22000583	MsG0880043287.01.T01:CDS	40.0%
!!	GAACAAGGTATTGAGGATGT+GGG	-	Chr8:22000565-22000584	MsG0880043287.01.T01:CDS	40.0%
!!!	AACGTCACTGATTTTGCATG+CGG	+	Chr8:22000337-22000356	None:intergenic	40.0%
	CGTCACCAAGAAAATCCGAA+AGG	+	Chr8:22000417-22000436	None:intergenic	45.0%
	GTGATTTCTAATGTGCGTGC+TGG	+	Chr8:22000154-22000173	None:intergenic	45.0%
	TATTGAGGATGTGGGGTTGA+AGG	-	Chr8:22000573-22000592	MsG0880043287.01.T01:CDS	45.0%
!	GAGTTATGGGTTGAGGGATT+GGG	-	Chr8:22000468-22000487	MsG0880043287.01.T01:CDS	45.0%
!	TGAGTTATGGGTTGAGGGAT+TGG	-	Chr8:22000467-22000486	MsG0880043287.01.T01:CDS	45.0%
	AGTGGCTAGGATAGCCCTTT+CGG	-	Chr8:22000399-22000418	MsG0880043287.01.T01:CDS	50.0%
	GCTATCCTAGCCACTCCAAT+GGG	+	Chr8:22000394-22000413	None:intergenic	50.0%
	GTGAGAAGGGTGACACAAGA+AGG	-	Chr8:22000523-22000542	MsG0880043287.01.T01:CDS	50.0%
	TACAAAGGAGCTCGTCCCAT+TGG	-	Chr8:22000376-22000395	MsG0880043287.01.T01:CDS	50.0%
!	TATGGGTTGAGGGATTGGGA+TGG	-	Chr8:22000472-22000491	MsG0880043287.01.T01:CDS	50.0%
!!!	GTCACTGATTTTGCATGCGG+TGG	+	Chr8:22000334-22000353	None:intergenic	50.0%
	GGCTATCCTAGCCACTCCAA+TGG	+	Chr8:22000395-22000414	None:intergenic	55.0%
	GGTTGAGGGATTGGGATGGT+AGG	-	Chr8:22000476-22000495	MsG0880043287.01.T01:CDS	55.0%
	TGAGGATGTGGGGTTGAAGG+TGG	-	Chr8:22000576-22000595	MsG0880043287.01.T01:CDS	55.0%
	AGGAGCTCGTCCCATTGGAG+TGG	-	Chr8:22000381-22000400	MsG0880043287.01.T01:CDS	60.0%
	CTCGTCCCATTGGAGTGGCT+AGG	-	Chr8:22000386-22000405	MsG0880043287.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	22000136	22000696	22000136	ID=MsG0880043287.01;Name=MsG0880043287.01
Chr8	mRNA	22000136	22000696	22000136	ID=MsG0880043287.01.T01;Parent=MsG0880043287.01;Name=MsG0880043287.01.T01;_AED=0.47;_eAED=0.47;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|186
Chr8	exon	22000136	22000696	22000136	ID=MsG0880043287.01.T01:exon:5831;Parent=MsG0880043287.01.T01
Chr8	CDS	22000136	22000696	22000136	ID=MsG0880043287.01.T01:cds;Parent=MsG0880043287.01.T01

Gene Sequence

>MsG0880043287.01.T01

ATGGAAGGAAAACAACCAGCACGCACATTAGAAATCACCATTATTTCCGGACAAAACATAAGTGTTGATCGAAATTCAAAGGGAGATGATATTTATGTTGTTGTTCGTGCGGAGTCTCTCAACTCTTGCACGACAAAAATGGTGAAGGAAAATGAGGGTTTACTTTCATGGAACGAAAAATTCTTATTAGATATTCCACCGCATGCAAAATCAGTGACGTTTGAGGTACAATGCAAGAAGTACAAAGGAGCTCGTCCCATTGGAGTGGCTAGGATAGCCCTTTCGGATTTTCTTGGTGACGATTTGTCGTTGCAAAGTGATGTTCAAACTTTGAGTTATGGGTTGAGGGATTGGGATGGTAGGAAAAATGGTGTTATTAATTTTAGTGTGAGAAGGGTGACACAAGAAGGTAATTTGTGTGTAGAAAAAGAACAAGGTATTGAGGATGTGGGGTTGAAGGTGGATGAGAAGAATTCAAATCATGTTGTCATTGGGATTCCAGTTTTGGGTTTTTTGTTTCTTTTGGGCTATTCTCTTTTCTCTTTTGTTCGTCGAAAGTAA

Protein sequence

>MsG0880043287.01.T01

MEGKQPARTLEITIISGQNISVDRNSKGDDIYVVVRAESLNSCTTKMVKENEGLLSWNEKFLLDIPPHAKSVTFEVQCKKYKGARPIGVARIALSDFLGDDLSLQSDVQTLSYGLRDWDGRKNGVINFSVRRVTQEGNLCVEKEQGIEDVGLKVDEKNSNHVVIGIPVLGFLFLLGYSLFSFVRRK*