AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040723.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040723.01.T01 MTR_7g096650 96.085 613 23 1 11 622 33 645 0.0 1150
MsG0780040723.01.T01 MTR_7g096650 93.049 633 23 2 11 622 33 665 0.0 1139
MsG0780040723.01.T01 MTR_7g096650 96.581 468 16 0 155 622 2 469 0.0 929
MsG0780040723.01.T01 MTR_1g070180 56.090 665 229 11 2 620 18 665 0.0 684
MsG0780040723.01.T01 MTR_4g051565 56.771 192 79 2 423 614 619 806 3.55e-61 218
MsG0780040723.01.T01 MTR_4g051565 56.771 192 79 2 423 614 707 894 1.58e-60 217
MsG0780040723.01.T01 MTR_2g087295 55.729 192 81 2 423 614 668 855 1.85e-59 214
MsG0780040723.01.T01 MTR_7g063470 27.330 633 341 23 49 605 77 666 1.53e-43 166
MsG0780040723.01.T01 MTR_1g077640 45.856 181 89 3 439 614 573 749 5.59e-43 165
MsG0780040723.01.T01 MTR_7g063470 27.488 633 340 25 49 605 27 616 1.41e-41 160
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040723.01.T01 AT1G06150 38.567 726 324 18 1 618 23 734 3.93e-123 381
MsG0780040723.01.T01 AT1G06150 38.705 726 321 19 1 618 23 732 9.87e-122 378
MsG0780040723.01.T01 AT2G31280 37.569 724 294 24 11 617 34 716 1.20e-113 356
MsG0780040723.01.T01 AT2G31280 36.707 741 294 25 11 617 34 733 2.43e-109 345
MsG0780040723.01.T01 AT2G31280 46.765 340 133 7 291 593 360 688 3.56e-70 241
MsG0780040723.01.T01 AT2G31280 50.667 75 20 2 11 85 60 117 1.72e-13 74.3
MsG0780040723.01.T01 AT2G27230 39.286 308 158 6 319 614 330 620 5.30e-53 192
MsG0780040723.01.T01 AT2G27230 39.286 308 158 6 319 614 330 620 5.30e-53 192
MsG0780040723.01.T01 AT1G64625 47.802 182 80 2 433 614 327 493 2.50e-45 168
MsG0780040723.01.T01 AT1G64625 47.802 182 80 2 433 614 341 507 2.99e-45 168
MsG0780040723.01.T01 AT1G64625 47.802 182 80 2 433 614 351 517 4.00e-45 168
MsG0780040723.01.T01 AT1G64625 64.286 70 25 0 433 502 341 410 3.36e-24 106

Find 133 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACAACTCATTCTGCTTAT+TGG 0.152338 7:-81628312 MsG0780040723.01.T01:CDS
CTATACACCGTTGAAGTTTC+CGG 0.217483 7:-81628014 MsG0780040723.01.T01:CDS
CTTCTGCTATTTCAAGAAAA+TGG 0.233515 7:+81626318 None:intergenic
CACAACTCATTCTGCTTATT+GGG 0.245900 7:-81628311 MsG0780040723.01.T01:CDS
TCACACTCCCTTGTGATTAT+AGG 0.256311 7:+81628166 None:intergenic
TGACATTGACTGAAGCAAAA+TGG 0.267699 7:+81628231 None:intergenic
CCCACCTTCAATCTGTTCTA+AGG 0.273170 7:+81630866 None:intergenic
AATAATCAAGTTACAAGTTC+TGG 0.277737 7:-81630640 MsG0780040723.01.T01:CDS
ATCTCATCCAGAGCATCTTT+TGG 0.297480 7:-81627852 MsG0780040723.01.T01:CDS
TCATTCTGCTTATTGGGAAA+TGG 0.305416 7:-81628305 MsG0780040723.01.T01:CDS
TAATCATACCCTTGCCCTAA+TGG 0.307412 7:+81630786 None:intergenic
GTTGGACAGGTAGCTGTTAC+TGG 0.310281 7:-81630688 MsG0780040723.01.T01:CDS
TCATATAATGCATATCCATT+AGG 0.320068 7:-81630801 MsG0780040723.01.T01:CDS
AAATTTACACATGACGCTTT+GGG 0.325329 7:-81630843 MsG0780040723.01.T01:CDS
GAAATTTACACATGACGCTT+TGG 0.333321 7:-81630844 MsG0780040723.01.T01:CDS
AATGTGGAGCATCGGGAATT+TGG 0.335495 7:-81628199 MsG0780040723.01.T01:CDS
GAAAGTTCATTCAATATTAG+TGG 0.338537 7:-81626550 MsG0780040723.01.T01:CDS
GAGTTCTGGTGACCAATAAA+AGG 0.353943 7:+81625659 None:intergenic
GCAGAAGCTGTAAGAAGCTT+GGG 0.363557 7:-81626302 MsG0780040723.01.T01:CDS
AGAGCTTAATAAGAAAAGTA+TGG 0.365328 7:-81625411 MsG0780040723.01.T01:three_prime_UTR
AATCACATCACAATATATAA+TGG 0.368044 7:+81625366 None:intergenic
CATATAATGCATATCCATTA+GGG 0.368715 7:-81630800 MsG0780040723.01.T01:CDS
ATGCAATCTGCATTGAGTTC+TGG 0.368808 7:-81627758 MsG0780040723.01.T01:CDS
TTTGATTGTATGTTTGTGTT+TGG 0.374751 7:-81625530 MsG0780040723.01.T01:three_prime_UTR
TTCTGAGCAGGGTTCAAGTT+GGG 0.392393 7:-81626595 MsG0780040723.01.T01:CDS
CAAGTTGGGCAGTTGAGGTA+GGG 0.392788 7:-81626581 MsG0780040723.01.T01:CDS
GACATTGACTGAAGCAAAAT+GGG 0.393543 7:+81628232 None:intergenic
CATTCTGCTTATTGGGAAAT+GGG 0.399460 7:-81628304 MsG0780040723.01.T01:CDS
TGGATCCTCTAGTTCTGAGC+AGG 0.399527 7:-81626607 MsG0780040723.01.T01:CDS
TGGATCAGTTGCCTGTCTCT+TGG 0.401708 7:+81627527 None:intergenic
TGATCATCAAAAGATAAATC+TGG 0.403829 7:+81625453 None:intergenic
AAAGTTACCTTAGCTCCATT+TGG 0.410276 7:+81627473 None:intergenic
TCCTTCGTTTACAGTATTGT+TGG 0.413291 7:-81630706 MsG0780040723.01.T01:intron
TCAAGTTGGGCAGTTGAGGT+AGG 0.422938 7:-81626582 MsG0780040723.01.T01:CDS
GCAAGAAGAGGGCTAGGCCC+GGG 0.423693 7:-81627568 MsG0780040723.01.T01:CDS
CGGAAACTTCAACGGTGTAT+AGG 0.424510 7:+81628015 None:intergenic
CAGTGATCAAGAATGAGTTC+TGG 0.426182 7:+81625645 None:intergenic
TAAGCTCCTTGATTCGATCT+TGG 0.429401 7:+81627507 None:intergenic
CCGAGGTCTACAACTTTCCC+CGG 0.432351 7:+81627550 None:intergenic
AGCAAGAAGAGGGCTAGGCC+CGG 0.440699 7:-81627569 MsG0780040723.01.T01:CDS
AAATTGTTCACTACAAGCAC+TGG 0.441281 7:+81627619 None:intergenic
AACAGTAACTGTTTGATTCG+TGG 0.442090 7:-81625693 MsG0780040723.01.T01:exon
CTGTTGATACACAACGCTCT+TGG 0.444435 7:+81625711 None:intergenic
TTGGGAAATGGGTGATGATA+TGG 0.445351 7:-81628293 MsG0780040723.01.T01:CDS
GTTTGATTTCAGTTTGCTGA+TGG 0.448934 7:-81630481 MsG0780040723.01.T01:intron
AGCAGAAGCTGTAAGAAGCT+TGG 0.453234 7:-81626303 MsG0780040723.01.T01:CDS
CAACAGAAATGTACACAGAT+TGG 0.454049 7:-81625767 MsG0780040723.01.T01:CDS
CAAATGGAAACAGACATTCT+TGG 0.454352 7:-81626627 MsG0780040723.01.T01:CDS
TTTGAAGAGCTCTTCATCTC+AGG 0.455900 7:-81628724 MsG0780040723.01.T01:intron
ATTGCTTCCAAAAGATGCTC+TGG 0.457697 7:+81627845 None:intergenic
CGTTTACAGTATTGTTGGAC+AGG 0.459013 7:-81630701 MsG0780040723.01.T01:intron
CTTGGACCATCTTCTTTGAA+AGG 0.461847 7:-81627968 MsG0780040723.01.T01:CDS
TTTAATACACCAATCGGAAA+AGG 0.462220 7:-81628044 MsG0780040723.01.T01:CDS
TTACTCCCTTTCAAAGAAGA+TGG 0.472152 7:+81627962 None:intergenic
TATGATTAATGTGGAGCATC+GGG 0.476608 7:-81628206 MsG0780040723.01.T01:CDS
AAGTTGGGCAGTTGAGGTAG+GGG 0.482715 7:-81626580 MsG0780040723.01.T01:CDS
CTATGATTTAATACACCAAT+CGG 0.489438 7:-81628050 MsG0780040723.01.T01:CDS
TTGGACCATCTTCTTTGAAA+GGG 0.489648 7:-81627967 MsG0780040723.01.T01:CDS
TTGTCCTCTCTGACAAGAGA+AGG 0.489749 7:+81627689 None:intergenic
CTTAGAGAGTTGGTACCAAA+TGG 0.491010 7:-81627488 MsG0780040723.01.T01:CDS
GTAGACCTCGGCCAAGAGAC+AGG 0.493853 7:-81627538 MsG0780040723.01.T01:CDS
TGTTCCTTCCAGAAAATTGA+AGG 0.496224 7:+81628335 None:intergenic
TTGCAGGATCTTGACATTGG+AGG 0.497906 7:-81630949 MsG0780040723.01.T01:CDS
GGGTTCAAGTTGGGCAGTTG+AGG 0.499697 7:-81626586 MsG0780040723.01.T01:CDS
TACACATGACGCTTTGGGGT+TGG 0.500312 7:-81630838 MsG0780040723.01.T01:CDS
GTGTAGTATTGATTCACTAC+TGG 0.507034 7:-81627362 MsG0780040723.01.T01:CDS
TGACTAGTGTTAAACACATC+AGG 0.510232 7:+81627887 None:intergenic
ATTACTACTGTGACAGATGT+TGG 0.513389 7:+81627817 None:intergenic
ACTGAGTCTTGCTCATTACA+AGG 0.514767 7:+81625595 None:intergenic
AAAACAGCAAGAAGAGGGCT+AGG 0.521393 7:-81627574 MsG0780040723.01.T01:CDS
GCTGCAGGTGAATGAAGATA+CGG 0.524306 7:-81628829 MsG0780040723.01.T01:intron
AAGTTCTGGCTTGTCTTCTG+AGG 0.524799 7:-81630626 MsG0780040723.01.T01:intron
CAAGAAGAGGGCTAGGCCCG+GGG 0.530342 7:-81627567 MsG0780040723.01.T01:CDS
TAATCAAGATATGAAAATTG+TGG 0.531631 7:-81627915 MsG0780040723.01.T01:CDS
ATATGATTAATGTGGAGCAT+CGG 0.537298 7:-81628207 MsG0780040723.01.T01:CDS
TAATCACAAGGGAGTGTGAA+GGG 0.537921 7:-81628162 MsG0780040723.01.T01:CDS
TTTGATTCGTGGAAACTTCG+CGG 0.538267 7:-81625682 MsG0780040723.01.T01:three_prime_UTR
AATTCTGCTACAAATAATGT+TGG 0.540722 7:-81628076 MsG0780040723.01.T01:CDS
TTTGATTTCAGTTTGCTGAT+GGG 0.540982 7:-81630480 MsG0780040723.01.T01:intron
TTTGTATTTGACTAGGAATG+TGG 0.541162 7:+81628751 None:intergenic
ATCGATATGCTTTATCGTTG+AGG 0.544767 7:-81626234 MsG0780040723.01.T01:intron
ATGATATGGTCAAGCATGAA+GGG 0.546110 7:-81628279 MsG0780040723.01.T01:CDS
CTGCAGGTGAATGAAGATAC+GGG 0.547557 7:-81628828 MsG0780040723.01.T01:intron
AATCAAGGAGCTTAGAGAGT+TGG 0.550880 7:-81627498 MsG0780040723.01.T01:CDS
AGTTGCCTGTCTCTTGGCCG+AGG 0.552330 7:+81627533 None:intergenic
ACACCGTTGAAGTTTCCGGC+TGG 0.554500 7:-81628010 MsG0780040723.01.T01:CDS
GTTGGTACCAAATGGAGCTA+AGG 0.557430 7:-81627480 MsG0780040723.01.T01:intron
GATGATATGGTCAAGCATGA+AGG 0.560099 7:-81628280 MsG0780040723.01.T01:CDS
ATGCATATCCATTAGGGCAA+GGG 0.560663 7:-81630794 MsG0780040723.01.T01:intron
TAGATGATGAACTCAAACAA+TGG 0.565458 7:+81627663 None:intergenic
GATTTCAGTTTGCTGATGGG+TGG 0.567156 7:-81630477 MsG0780040723.01.T01:intron
ACTTGCTGATACTAAATCAA+AGG 0.571474 7:-81627275 MsG0780040723.01.T01:intron
AATGCATATCCATTAGGGCA+AGG 0.575204 7:-81630795 MsG0780040723.01.T01:CDS
AAACTACTTTGTATTTGACT+AGG 0.575216 7:+81628744 None:intergenic
CATCCAGCCGGAAACTTCAA+CGG 0.575629 7:+81628007 None:intergenic
CTGTTACTGGAAAGCATCAG+TGG 0.576674 7:-81630675 MsG0780040723.01.T01:CDS
CACATCTTGAATAGAAGCAT+CGG 0.581769 7:+81627727 None:intergenic
ACCTTAGAACAGATTGAAGG+TGG 0.582013 7:-81630867 MsG0780040723.01.T01:CDS
GTTCTGAGCAGGGTTCAAGT+TGG 0.582839 7:-81626596 MsG0780040723.01.T01:CDS
GGATCCTCTAGTTCTGAGCA+GGG 0.587080 7:-81626606 MsG0780040723.01.T01:CDS
CAACAGACAGATGCTTATTG+AGG 0.589879 7:-81626514 MsG0780040723.01.T01:intron
AAACTTCAACGGTGTATAGG+AGG 0.590458 7:+81628018 None:intergenic
AATTTACACATGACGCTTTG+GGG 0.591769 7:-81630842 MsG0780040723.01.T01:CDS
CGAGGTCTACAACTTTCCCC+GGG 0.594772 7:+81627551 None:intergenic
GTTCCTTCCAGAAAATTGAA+GGG 0.595206 7:+81628336 None:intergenic
TGTGAACTACTTGAAGCACT+TGG 0.597240 7:-81627986 MsG0780040723.01.T01:CDS
AAGACCTTAGAACAGATTGA+AGG 0.598633 7:-81630870 MsG0780040723.01.T01:CDS
TTCCTTCCAGAAAATTGAAG+GGG 0.599786 7:+81628337 None:intergenic
TACACAGATTGGACATCTTG+TGG 0.604378 7:-81625756 MsG0780040723.01.T01:CDS
AATGTCAGATATGATTAATG+TGG 0.604727 7:-81628215 MsG0780040723.01.T01:CDS
ACTGATCCAAGATCGAATCA+AGG 0.605915 7:-81627513 MsG0780040723.01.T01:CDS
TGAACCCTGCTCAGAACTAG+AGG 0.606197 7:+81626602 None:intergenic
CCGGGGAAAGTTGTAGACCT+CGG 0.609765 7:-81627550 MsG0780040723.01.T01:CDS
TCAAGTAGTTCACATCCAGC+CGG 0.613432 7:+81627995 None:intergenic
CCTCTCTGACAAGAGAAGGA+TGG 0.616107 7:+81627693 None:intergenic
AGTTGGGCAGTTGAGGTAGG+GGG 0.617248 7:-81626579 MsG0780040723.01.T01:CDS
ATCACAAGGGAGTGTGAAGG+GGG 0.617701 7:-81628160 MsG0780040723.01.T01:CDS
AATCACAAGGGAGTGTGAAG+GGG 0.618123 7:-81628161 MsG0780040723.01.T01:CDS
GATTGTAGTATCTGAACAAG+TGG 0.620442 7:+81625733 None:intergenic
ATAATCACAAGGGAGTGTGA+AGG 0.628009 7:-81628163 MsG0780040723.01.T01:CDS
CTGAGTCTTGCTCATTACAA+GGG 0.631526 7:+81625596 None:intergenic
CAGAAGCTGTAAGAAGCTTG+GGG 0.638694 7:-81626301 MsG0780040723.01.T01:CDS
AATTGTTCACTACAAGCACT+GGG 0.639480 7:+81627620 None:intergenic
CCATCCTTCTCTTGTCAGAG+AGG 0.641149 7:-81627693 MsG0780040723.01.T01:CDS
GATAAGACCTATAATCACAA+GGG 0.649989 7:-81628173 MsG0780040723.01.T01:CDS
CCTTAGAACAGATTGAAGGT+GGG 0.652546 7:-81630866 MsG0780040723.01.T01:CDS
GGAGAATATACTGCAACTTG+CGG 0.655687 7:-81625390 MsG0780040723.01.T01:three_prime_UTR
GTCTTGCTCATTACAAGGGT+AGG 0.661672 7:+81625600 None:intergenic
AGATAAGACCTATAATCACA+AGG 0.662577 7:-81628174 MsG0780040723.01.T01:CDS
TGCAGGTGAATGAAGATACG+GGG 0.667831 7:-81628827 MsG0780040723.01.T01:intron
TGATATGGTCAAGCATGAAG+GGG 0.672704 7:-81628278 MsG0780040723.01.T01:CDS
GTGCATGAGGAATAAAACAG+CGG 0.749053 7:-81628371 MsG0780040723.01.T01:CDS
GCAGGTGAATGAAGATACGG+GGG 0.775671 7:-81628826 MsG0780040723.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTAAATTATATATAAT+TGG + Chr7:81630263-81630282 None:intergenic 0.0%
!! TATATTATTTCAATAAAGTT+TGG + Chr7:81626281-81626300 None:intergenic 10.0%
!!! AAATATATTTTTACAGATTA+TGG + Chr7:81629096-81629115 None:intergenic 10.0%
!!! ATTTTTTTTTTTTTTTTTGC+AGG - Chr7:81625343-81625362 MsG0780040723.01.T01:three_prime_UTR 10.0%
!!! TATTTTTCTAGTATATAATT+AGG + Chr7:81626919-81626938 None:intergenic 10.0%
!! ATAAAAACATAATAAATCCA+TGG + Chr7:81630461-81630480 None:intergenic 15.0%
!! ATAAAAAGTAACAAAGTTTA+TGG + Chr7:81629255-81629274 None:intergenic 15.0%
!!! TTATTGTTTTTCTTAAGTTT+GGG - Chr7:81630736-81630755 MsG0780040723.01.T01:intron 15.0%
!!! TTTATTGTTTTTCTTAAGTT+TGG - Chr7:81630735-81630754 MsG0780040723.01.T01:intron 15.0%
!! AACAAACTTCAAGAAAATTA+TGG - Chr7:81626388-81626407 MsG0780040723.01.T01:intron 20.0%
!! AACACTTATAATAATGAAAG+TGG - Chr7:81626134-81626153 MsG0780040723.01.T01:intron 20.0%
!! AATCACATCACAATATATAA+TGG + Chr7:81630945-81630964 None:intergenic 20.0%
!! ATCAAATGTTTACACAATAA+AGG + Chr7:81627433-81627452 None:intergenic 20.0%
!! ATCCTGGTTATAAATAATTA+TGG + Chr7:81627835-81627854 None:intergenic 20.0%
!! TAACCTTAAAACTACTAAAA+AGG + Chr7:81629212-81629231 None:intergenic 20.0%
!! TAATCAAGATATGAAAATTG+TGG - Chr7:81628393-81628412 MsG0780040723.01.T01:CDS 20.0%
!! TAATTTACTAAATTAGCTAC+TGG - Chr7:81627015-81627034 MsG0780040723.01.T01:intron 20.0%
!! TACAAAAGTGATCATTAAAA+AGG - Chr7:81629436-81629455 MsG0780040723.01.T01:intron 20.0%
!! TTAAAACTACTAAAAAGGAA+TGG + Chr7:81629207-81629226 None:intergenic 20.0%
!! TTTGCATACATACAAAATTA+TGG - Chr7:81629161-81629180 MsG0780040723.01.T01:intron 20.0%
!!! AAATAGTTAAAGGGTATTAT+TGG + Chr7:81629296-81629315 None:intergenic 20.0%
!!! ACTACATTTTATATCAAGTT+GGG - Chr7:81629117-81629136 MsG0780040723.01.T01:intron 20.0%
!!! ATAAATCTGGAACATAAAAA+AGG + Chr7:81630845-81630864 None:intergenic 20.0%
!!! ATTCCTTTTTAGTAGTTTTA+AGG - Chr7:81629206-81629225 MsG0780040723.01.T01:intron 20.0%
!!! ATTTGCCTTATTAAATGTTA+GGG - Chr7:81627735-81627754 MsG0780040723.01.T01:CDS 20.0%
!!! TTTAATGTTGATGGTATATT+TGG - Chr7:81626161-81626180 MsG0780040723.01.T01:intron 20.0%
! AAAAACTAATTAGCTACTTC+TGG + Chr7:81627232-81627251 None:intergenic 25.0%
! AAACTACTTTGTATTTGACT+AGG + Chr7:81627567-81627586 None:intergenic 25.0%
! AAACTTTGGTACAATTCTTT+AGG - Chr7:81626315-81626334 MsG0780040723.01.T01:CDS 25.0%
! AAGTGATCATTAAAAAGGAA+CGG - Chr7:81629441-81629460 MsG0780040723.01.T01:intron 25.0%
! AATAAAACAGTTGCCTAAAT+TGG - Chr7:81627184-81627203 MsG0780040723.01.T01:intron 25.0%
! AATAATCAAGTTACAAGTTC+TGG - Chr7:81625668-81625687 MsG0780040723.01.T01:three_prime_UTR 25.0%
! AATGTCAGATATGATTAATG+TGG - Chr7:81628093-81628112 MsG0780040723.01.T01:CDS 25.0%
! AATTCTGCTACAAATAATGT+TGG - Chr7:81628232-81628251 MsG0780040723.01.T01:CDS 25.0%
! ACAAATAAACTCACAATGAT+TGG + Chr7:81630311-81630330 None:intergenic 25.0%
! AGAGCTTAATAAGAAAAGTA+TGG - Chr7:81630897-81630916 MsG0780040723.01.T01:CDS 25.0%
! ATCAAATTGTAATATTCCAC+AGG + Chr7:81629835-81629854 None:intergenic 25.0%
! ATCACTCAAAAAACAAAAAC+GGG + Chr7:81628877-81628896 None:intergenic 25.0%
! ATGGTATATTTGGAAAAGTT+TGG - Chr7:81626171-81626190 MsG0780040723.01.T01:intron 25.0%
! CAAAAATATGATATTGGACT+CGG - Chr7:81628183-81628202 MsG0780040723.01.T01:CDS 25.0%
! CAGTAGTGTTAATTAAAGAA+GGG + Chr7:81629644-81629663 None:intergenic 25.0%
! CATATAATGCATATCCATTA+GGG - Chr7:81625508-81625527 MsG0780040723.01.T01:three_prime_UTR 25.0%
! CATCACTCAAAAAACAAAAA+CGG + Chr7:81628878-81628897 None:intergenic 25.0%
! CTATGATTTAATACACCAAT+CGG - Chr7:81628258-81628277 MsG0780040723.01.T01:CDS 25.0%
! GAAAGTTCATTCAATATTAG+TGG - Chr7:81629758-81629777 MsG0780040723.01.T01:intron 25.0%
! GACAACTGTTATTAAACTAA+GGG - Chr7:81630234-81630253 MsG0780040723.01.T01:intron 25.0%
! TAGAACAGACAAATTATACA+AGG + Chr7:81627358-81627377 None:intergenic 25.0%
! TCAAGAAAATTATGGATTTG+AGG - Chr7:81626396-81626415 MsG0780040723.01.T01:intron 25.0%
! TCATATAATGCATATCCATT+AGG - Chr7:81625507-81625526 MsG0780040723.01.T01:three_prime_UTR 25.0%
! TGAAATAATATAATGCTGCA+TGG - Chr7:81626289-81626308 MsG0780040723.01.T01:CDS 25.0%
! TGACAACTGTTATTAAACTA+AGG - Chr7:81630233-81630252 MsG0780040723.01.T01:intron 25.0%
! TGATCATCAAAAGATAAATC+TGG + Chr7:81630858-81630877 None:intergenic 25.0%
! TGCCATAATTATTTATAACC+AGG - Chr7:81627830-81627849 MsG0780040723.01.T01:CDS 25.0%
! TGGGATGATAAATAGTTAAA+GGG + Chr7:81629305-81629324 None:intergenic 25.0%
! TTAAAATCACAACAAATGCA+AGG + Chr7:81626758-81626777 None:intergenic 25.0%
! TTTGATTGTATGTTTGTGTT+TGG - Chr7:81630778-81630797 MsG0780040723.01.T01:intron 25.0%
!! ACTAGGAAATTGTTTTCTAT+CGG + Chr7:81626527-81626546 None:intergenic 25.0%
!! GACTACATTTTATATCAAGT+TGG - Chr7:81629116-81629135 MsG0780040723.01.T01:intron 25.0%
!! GATTTGCCTTATTAAATGTT+AGG - Chr7:81627734-81627753 MsG0780040723.01.T01:CDS 25.0%
!! TGAGATCTTCAAATTTTCTA+AGG + Chr7:81625740-81625759 None:intergenic 25.0%
!! TTCTAATTTTCAGATAGACA+TGG + Chr7:81625924-81625943 None:intergenic 25.0%
!! TTTGCCTTATTAAATGTTAG+GGG - Chr7:81627736-81627755 MsG0780040723.01.T01:CDS 25.0%
!!! ATCTTCAAATTTTCTAAGGA+CGG + Chr7:81625736-81625755 None:intergenic 25.0%
!!! GCTTACTGATTTATTAGAAT+TGG - Chr7:81625885-81625904 MsG0780040723.01.T01:intron 25.0%
AAAAAAACAGTGCAGTAAGA+AGG + Chr7:81630202-81630221 None:intergenic 30.0%
AAACTGAAATCAAACGAAAG+GGG + Chr7:81625822-81625841 None:intergenic 30.0%
AAACTTAGTTGCAATTCCTT+AGG + Chr7:81626461-81626480 None:intergenic 30.0%
AAATCAAAGGTAAGGTTTAG+AGG - Chr7:81629046-81629065 MsG0780040723.01.T01:intron 30.0%
AAATTTACACATGACGCTTT+GGG - Chr7:81625465-81625484 MsG0780040723.01.T01:three_prime_UTR 30.0%
AACTACTAAAAAGGAATGGA+TGG + Chr7:81629203-81629222 None:intergenic 30.0%
AATCAAAGGTAAGGTTTAGA+GGG - Chr7:81629047-81629066 MsG0780040723.01.T01:intron 30.0%
AGATAAACAAGTGAAATCAG+AGG - Chr7:81626965-81626984 MsG0780040723.01.T01:intron 30.0%
AGATAAGACCTATAATCACA+AGG - Chr7:81628134-81628153 MsG0780040723.01.T01:CDS 30.0%
AGCATCAAGAAGAGATATTA+TGG + Chr7:81626719-81626738 None:intergenic 30.0%
ATATGATTAATGTGGAGCAT+CGG - Chr7:81628101-81628120 MsG0780040723.01.T01:CDS 30.0%
ATCTAAAAACAGCAAGAAGA+GGG - Chr7:81628729-81628748 MsG0780040723.01.T01:CDS 30.0%
CAAACTGAAATCAAACGAAA+GGG + Chr7:81625823-81625842 None:intergenic 30.0%
CAACTTGAAATGTATCCTAA+AGG + Chr7:81629536-81629555 None:intergenic 30.0%
CCAATTGATCTATAGGAATA+AGG - Chr7:81630145-81630164 MsG0780040723.01.T01:intron 30.0%
CCTTATTCCTATAGATCAAT+TGG + Chr7:81630148-81630167 None:intergenic 30.0%
CTATGTAGAATTATTACTGC+AGG + Chr7:81627639-81627658 None:intergenic 30.0%
CTGATACTAAATCAAAGGTA+AGG - Chr7:81629038-81629057 MsG0780040723.01.T01:intron 30.0%
CTTTGGTTAGAAAATCCATT+AGG - Chr7:81627316-81627335 MsG0780040723.01.T01:CDS 30.0%
GAAGATCTCAAATTCGTATT+GGG - Chr7:81625750-81625769 MsG0780040723.01.T01:CDS 30.0%
GATAAGACCTATAATCACAA+GGG - Chr7:81628135-81628154 MsG0780040723.01.T01:CDS 30.0%
GATGAACAAATTGTGTATCA+GGG - Chr7:81630512-81630531 MsG0780040723.01.T01:intron 30.0%
GATTTGAGAAATATATCCTC+TGG - Chr7:81629069-81629088 MsG0780040723.01.T01:intron 30.0%
GCAGTAGTGTTAATTAAAGA+AGG + Chr7:81629645-81629664 None:intergenic 30.0%
GTATTACTATTGGTATTGTG+AGG + Chr7:81625950-81625969 None:intergenic 30.0%
GTGGGATGATAAATAGTTAA+AGG + Chr7:81629306-81629325 None:intergenic 30.0%
TACGTGTTCTAGTAAAGAAA+AGG + Chr7:81630389-81630408 None:intergenic 30.0%
TAGATGATGAACTCAAACAA+TGG + Chr7:81628648-81628667 None:intergenic 30.0%
TATTAAATGTTAGGGGGTAA+GGG - Chr7:81627743-81627762 MsG0780040723.01.T01:CDS 30.0%
TCTCTGCAGTATATAGTTAA+GGG - Chr7:81629342-81629361 MsG0780040723.01.T01:intron 30.0%
TGAAGATCTCAAATTCGTAT+TGG - Chr7:81625749-81625768 MsG0780040723.01.T01:CDS 30.0%
TGATGAACAAATTGTGTATC+AGG - Chr7:81630511-81630530 MsG0780040723.01.T01:intron 30.0%
TGCATAAAGTACACAAAAGT+GGG + Chr7:81626487-81626506 None:intergenic 30.0%
TGGCTGCAAAAATATGATAT+TGG - Chr7:81628177-81628196 MsG0780040723.01.T01:CDS 30.0%
TGTGAAGGAAAAATCATCTT+CGG - Chr7:81627901-81627920 MsG0780040723.01.T01:CDS 30.0%
TTACCCCCTAACATTTAATA+AGG + Chr7:81627743-81627762 None:intergenic 30.0%
TTAGAGAAAGAGAAGCAAAT+AGG + Chr7:81627269-81627288 None:intergenic 30.0%
TTATGGATTTGAGGAAATCA+TGG - Chr7:81626405-81626424 MsG0780040723.01.T01:intron 30.0%
TTATTAAATGTTAGGGGGTA+AGG - Chr7:81627742-81627761 MsG0780040723.01.T01:CDS 30.0%
TTGACTCTTTCTACCAATTT+AGG + Chr7:81627200-81627219 None:intergenic 30.0%
TTGCATAAAGTACACAAAAG+TGG + Chr7:81626488-81626507 None:intergenic 30.0%
TTTAATACACCAATCGGAAA+AGG - Chr7:81628264-81628283 MsG0780040723.01.T01:CDS 30.0%
TTTCCTAAACATGTACCTTT+AGG - Chr7:81629518-81629537 MsG0780040723.01.T01:intron 30.0%
TTTGTATTTGACTAGGAATG+TGG + Chr7:81627560-81627579 None:intergenic 30.0%
! AATCTGGAACATAAAAAAGG+TGG + Chr7:81630842-81630861 None:intergenic 30.0%
! AATTTTGCAGTTGCATCAAA+TGG - Chr7:81629665-81629684 MsG0780040723.01.T01:intron 30.0%
! ACTTGCTGATACTAAATCAA+AGG - Chr7:81629033-81629052 MsG0780040723.01.T01:intron 30.0%
! CAATGCAACATAACTGTTTT+TGG + Chr7:81629378-81629397 None:intergenic 30.0%
! CTTTTCTTATTAAGCTCTCA+AGG + Chr7:81630895-81630914 None:intergenic 30.0%
! TATCCTAAAGGTACATGTTT+AGG + Chr7:81629524-81629543 None:intergenic 30.0%
! TGTTTTTCTTAAGTTTGGGT+TGG - Chr7:81630740-81630759 MsG0780040723.01.T01:intron 30.0%
! TTGCCTTATTAAATGTTAGG+GGG - Chr7:81627737-81627756 MsG0780040723.01.T01:CDS 30.0%
!! CTAGCTGTTGATTTAGATAT+TGG - Chr7:81626876-81626895 MsG0780040723.01.T01:intron 30.0%
!! CTTCTGCTATTTCAAGAAAA+TGG + Chr7:81629993-81630012 None:intergenic 30.0%
!! TCTTCAAATTTTCTAAGGAC+GGG + Chr7:81625735-81625754 None:intergenic 30.0%
!! TTTGATTTCAGTTTGCTGAT+GGG - Chr7:81625828-81625847 MsG0780040723.01.T01:intron 30.0%
!!! AAGGGAGTAACTATTTTGAT+TGG - Chr7:81628359-81628378 MsG0780040723.01.T01:CDS 30.0%
!!! CGTTTTTGTTTTTTGAGTGA+TGG - Chr7:81628876-81628895 MsG0780040723.01.T01:intron 30.0%
!!! GAGTAACTATTTTGATTGGT+TGG - Chr7:81628363-81628382 MsG0780040723.01.T01:CDS 30.0%
!!! TTACACTTCTTTTTTTCAGC+CGG - Chr7:81627877-81627896 MsG0780040723.01.T01:CDS 30.0%
AAAGTATAGTGATGCAGACT+AGG + Chr7:81626544-81626563 None:intergenic 35.0%
AAAGTTACCTTAGCTCCATT+TGG + Chr7:81628838-81628857 None:intergenic 35.0%
AAATTGTTCACTACAAGCAC+TGG + Chr7:81628692-81628711 None:intergenic 35.0%
AACCTAGCCAATTGATCTAT+AGG - Chr7:81630138-81630157 MsG0780040723.01.T01:intron 35.0%
AACTGAAATCAAACGAAAGG+GGG + Chr7:81625821-81625840 None:intergenic 35.0%
AAGACCTTAGAACAGATTGA+AGG - Chr7:81625438-81625457 MsG0780040723.01.T01:three_prime_UTR 35.0%
AATGTATGCAATACCTCAAC+AGG + Chr7:81629921-81629940 None:intergenic 35.0%
AATTGTTCACTACAAGCACT+GGG + Chr7:81628691-81628710 None:intergenic 35.0%
AATTTACACATGACGCTTTG+GGG - Chr7:81625466-81625485 MsG0780040723.01.T01:three_prime_UTR 35.0%
ACACAACTCATTCTGCTTAT+TGG - Chr7:81627996-81628015 MsG0780040723.01.T01:CDS 35.0%
ACACTGCTTGGTATTACTAT+TGG + Chr7:81625960-81625979 None:intergenic 35.0%
ACCTGCATATAAAACTCAAG+AGG + Chr7:81627296-81627315 None:intergenic 35.0%
ACTGTTTCCAGTATTAAACC+AGG + Chr7:81629488-81629507 None:intergenic 35.0%
AGTGGACAGTTTAATGTTGA+TGG - Chr7:81626152-81626171 MsG0780040723.01.T01:intron 35.0%
ATACAGATATCAACCTGATG+TGG - Chr7:81627111-81627130 MsG0780040723.01.T01:intron 35.0%
ATCGATATGCTTTATCGTTG+AGG - Chr7:81630074-81630093 MsG0780040723.01.T01:intron 35.0%
ATGATATGGTCAAGCATGAA+GGG - Chr7:81628029-81628048 MsG0780040723.01.T01:CDS 35.0%
ATGCTGCATGGATAAAACTT+TGG - Chr7:81626301-81626320 MsG0780040723.01.T01:CDS 35.0%
ATGTATGCAATACCTCAACA+GGG + Chr7:81629920-81629939 None:intergenic 35.0%
ATTAAATGTTAGGGGGTAAG+GGG - Chr7:81627744-81627763 MsG0780040723.01.T01:CDS 35.0%
ATTACTACTGTGACAGATGT+TGG + Chr7:81628494-81628513 None:intergenic 35.0%
CAAATGGAAACAGACATTCT+TGG - Chr7:81629681-81629700 MsG0780040723.01.T01:intron 35.0%
CAACAGAAATGTACACAGAT+TGG - Chr7:81630541-81630560 MsG0780040723.01.T01:intron 35.0%
CACAACAACAATTGTCTACA+AGG + Chr7:81626607-81626626 None:intergenic 35.0%
CACAACTCATTCTGCTTATT+GGG - Chr7:81627997-81628016 MsG0780040723.01.T01:CDS 35.0%
CATCTAAAAACAGCAAGAAG+AGG - Chr7:81628728-81628747 MsG0780040723.01.T01:CDS 35.0%
CATTCTGCTTATTGGGAAAT+GGG - Chr7:81628004-81628023 MsG0780040723.01.T01:CDS 35.0%
CTCTCTGCAGTATATAGTTA+AGG - Chr7:81629341-81629360 MsG0780040723.01.T01:intron 35.0%
CTGTTTCCAGTATTAAACCA+GGG + Chr7:81629487-81629506 None:intergenic 35.0%
GAAATTTACACATGACGCTT+TGG - Chr7:81625464-81625483 MsG0780040723.01.T01:three_prime_UTR 35.0%
GATCATTAAAAAGGAACGGA+GGG - Chr7:81629445-81629464 MsG0780040723.01.T01:intron 35.0%
GATTAAGAGCAAAGACCTAA+TGG + Chr7:81627334-81627353 None:intergenic 35.0%
GATTGTAGTATCTGAACAAG+TGG + Chr7:81630578-81630597 None:intergenic 35.0%
GCAAACTGAAATCAAACGAA+AGG + Chr7:81625824-81625843 None:intergenic 35.0%
GTGAAAAAAGAACAATGAGC+CGG + Chr7:81626249-81626268 None:intergenic 35.0%
GTTCCTTCCAGAAAATTGAA+GGG + Chr7:81627975-81627994 None:intergenic 35.0%
TACACCATGTTGTCAAATAG+CGG - Chr7:81626049-81626068 MsG0780040723.01.T01:intron 35.0%
TACCATTTAACAACACTGCT+TGG + Chr7:81625972-81625991 None:intergenic 35.0%
TACTGTAAACGAAGGATCTT+AGG + Chr7:81625598-81625617 None:intergenic 35.0%
TATTAGCGAACGTGTAACAA+TGG + Chr7:81627791-81627810 None:intergenic 35.0%
TCATTCTGCTTATTGGGAAA+TGG - Chr7:81628003-81628022 MsG0780040723.01.T01:CDS 35.0%
TCCAACAATACTGTAAACGA+AGG + Chr7:81625606-81625625 None:intergenic 35.0%
TCCAATCTCAAATCAATGGT+CGG + Chr7:81627681-81627700 None:intergenic 35.0%
TCCTTCGTTTACAGTATTGT+TGG - Chr7:81625602-81625621 MsG0780040723.01.T01:three_prime_UTR 35.0%
TGACTAGTGTTAAACACATC+AGG + Chr7:81628424-81628443 None:intergenic 35.0%
TGATCATTAAAAAGGAACGG+AGG - Chr7:81629444-81629463 MsG0780040723.01.T01:intron 35.0%
TGATCTATAGGAATAAGGCT+TGG - Chr7:81630150-81630169 MsG0780040723.01.T01:intron 35.0%
TGGTTTAATACTGGAAACAG+TGG - Chr7:81629487-81629506 MsG0780040723.01.T01:intron 35.0%
TGTCTGTTCTATGATGTTGA+TGG - Chr7:81627367-81627386 MsG0780040723.01.T01:intron 35.0%
TGTTCCTTCCAGAAAATTGA+AGG + Chr7:81627976-81627995 None:intergenic 35.0%
TTACTCCCTTTCAAAGAAGA+TGG + Chr7:81628349-81628368 None:intergenic 35.0%
TTCCAGGATATAAACTTACG+AGG - Chr7:81627402-81627421 MsG0780040723.01.T01:intron 35.0%
TTCCTATAGATCAATTGGCT+AGG + Chr7:81630143-81630162 None:intergenic 35.0%
TTCCTCGTAAGTTTATATCC+TGG + Chr7:81627407-81627426 None:intergenic 35.0%
TTCCTTCCAGAAAATTGAAG+GGG + Chr7:81627974-81627993 None:intergenic 35.0%
TTGTTACACGTTCGCTAATA+TGG - Chr7:81627791-81627810 MsG0780040723.01.T01:CDS 35.0%
! AACAGTAACTGTTTGATTCG+TGG - Chr7:81630615-81630634 MsG0780040723.01.T01:intron 35.0%
! ACTTGCTAATGCTGAAGTTA+TGG - Chr7:81627073-81627092 MsG0780040723.01.T01:intron 35.0%
! AGTTTGGTTCATGTGGTAAT+AGG - Chr7:81626187-81626206 MsG0780040723.01.T01:intron 35.0%
! ATGGATTGTAGGATATTTCC+AGG - Chr7:81627386-81627405 MsG0780040723.01.T01:intron 35.0%
! CACATCTTGAATAGAAGCAT+CGG + Chr7:81628584-81628603 None:intergenic 35.0%
! GACATTGACTGAAGCAAAAT+GGG + Chr7:81628079-81628098 None:intergenic 35.0%
! GATGATTTTTCCTTCACATC+CGG + Chr7:81627899-81627918 None:intergenic 35.0%
! TACCAAGCAGTGTTGTTAAA+TGG - Chr7:81625967-81625986 MsG0780040723.01.T01:intron 35.0%
! TATGATTAATGTGGAGCATC+GGG - Chr7:81628102-81628121 MsG0780040723.01.T01:CDS 35.0%
! TCAGTTTTCTGCTGGAATTA+GGG - Chr7:81625859-81625878 MsG0780040723.01.T01:intron 35.0%
! TGACATTGACTGAAGCAAAA+TGG + Chr7:81628080-81628099 None:intergenic 35.0%
! TTGGAAAAGTTTGGTTCATG+TGG - Chr7:81626180-81626199 MsG0780040723.01.T01:intron 35.0%
! TTGGACCATCTTCTTTGAAA+GGG - Chr7:81628341-81628360 MsG0780040723.01.T01:CDS 35.0%
! TTGGGGCTTACAATTTTGAA+GGG - Chr7:81630024-81630043 MsG0780040723.01.T01:intron 35.0%
! TTTTACAGATTATGGACCAG+AGG + Chr7:81629088-81629107 None:intergenic 35.0%
! TTTTCTATCGGCGAATTTCT+AGG + Chr7:81626515-81626534 None:intergenic 35.0%
! TTTTTGCAGGATCTTGACAT+TGG - Chr7:81625356-81625375 MsG0780040723.01.T01:three_prime_UTR 35.0%
!! AACCATACAAAAAGCACCTA+AGG - Chr7:81626442-81626461 MsG0780040723.01.T01:intron 35.0%
!! ACCTCTTGAGTTTTATATGC+AGG - Chr7:81627292-81627311 MsG0780040723.01.T01:CDS 35.0%
!! CTATGATGTTGATGGATTGT+AGG - Chr7:81627375-81627394 MsG0780040723.01.T01:intron 35.0%
!! CTTCAAATTTTCTAAGGACG+GGG + Chr7:81625734-81625753 None:intergenic 35.0%
!! GAGTTTTATATGCAGGTCTT+TGG - Chr7:81627299-81627318 MsG0780040723.01.T01:CDS 35.0%
!! GTGTAGTATTGATTCACTAC+TGG - Chr7:81628946-81628965 MsG0780040723.01.T01:intron 35.0%
!! GTTTGATTTCAGTTTGCTGA+TGG - Chr7:81625827-81625846 MsG0780040723.01.T01:intron 35.0%
!! TTCCTTAGGTGCTTTTTGTA+TGG + Chr7:81626447-81626466 None:intergenic 35.0%
!!! CTCTTCTTGCTGTTTTTAGA+TGG + Chr7:81628730-81628749 None:intergenic 35.0%
AAAAAGGTGGCACTAAGAAG+TGG + Chr7:81630829-81630848 None:intergenic 40.0%
AAACTTCAACGGTGTATAGG+AGG + Chr7:81628293-81628312 None:intergenic 40.0%
AAATTAGCTACTGGAACCAG+AGG - Chr7:81627024-81627043 MsG0780040723.01.T01:intron 40.0%
AATCAAGGAGCTTAGAGAGT+TGG - Chr7:81628810-81628829 MsG0780040723.01.T01:CDS 40.0%
AATGCATATCCATTAGGGCA+AGG - Chr7:81625513-81625532 MsG0780040723.01.T01:three_prime_UTR 40.0%
ACCTTAGAACAGATTGAAGG+TGG - Chr7:81625441-81625460 MsG0780040723.01.T01:three_prime_UTR 40.0%
ACTGAAATCAAACGAAAGGG+GGG + Chr7:81625820-81625839 None:intergenic 40.0%
ACTGAGTCTTGCTCATTACA+AGG + Chr7:81630716-81630735 None:intergenic 40.0%
ACTGATCCAAGATCGAATCA+AGG - Chr7:81628795-81628814 MsG0780040723.01.T01:CDS 40.0%
ATAGCCGCTATTTGACAACA+TGG + Chr7:81626056-81626075 None:intergenic 40.0%
ATCCATGGAGCAGTTTCAAT+TGG + Chr7:81630446-81630465 None:intergenic 40.0%
ATGCAATCTGCATTGAGTTC+TGG - Chr7:81628550-81628569 MsG0780040723.01.T01:intron 40.0%
ATGCATATCCATTAGGGCAA+GGG - Chr7:81625514-81625533 MsG0780040723.01.T01:three_prime_UTR 40.0%
ATTATTACTGCAGGCAATCC+AGG + Chr7:81627630-81627649 None:intergenic 40.0%
ATTGCTTCCAAAAGATGCTC+TGG + Chr7:81628466-81628485 None:intergenic 40.0%
CAACAGACAGATGCTTATTG+AGG - Chr7:81629794-81629813 MsG0780040723.01.T01:intron 40.0%
CAGTGATCAAGAATGAGTTC+TGG + Chr7:81630666-81630685 None:intergenic 40.0%
CATGACTCATGAGATCTGAA+TGG + Chr7:81626817-81626836 None:intergenic 40.0%
CCAATCTCAAATCAATGGTC+GGG + Chr7:81627680-81627699 None:intergenic 40.0%
CCTTAGAACAGATTGAAGGT+GGG - Chr7:81625442-81625461 MsG0780040723.01.T01:three_prime_UTR 40.0%
CGTTTACAGTATTGTTGGAC+AGG - Chr7:81625607-81625626 MsG0780040723.01.T01:three_prime_UTR 40.0%
CTATACACCGTTGAAGTTTC+CGG - Chr7:81628294-81628313 MsG0780040723.01.T01:CDS 40.0%
CTGAGTCTTGCTCATTACAA+GGG + Chr7:81630715-81630734 None:intergenic 40.0%
CTTGGACCATCTTCTTTGAA+AGG - Chr7:81628340-81628359 MsG0780040723.01.T01:CDS 40.0%
GATGATATGGTCAAGCATGA+AGG - Chr7:81628028-81628047 MsG0780040723.01.T01:CDS 40.0%
GGAGAATATACTGCAACTTG+CGG - Chr7:81630918-81630937 MsG0780040723.01.T01:CDS 40.0%
GTCGTCCAATCTCAAATCAA+TGG + Chr7:81627685-81627704 None:intergenic 40.0%
GTGCATGAGGAATAAAACAG+CGG - Chr7:81627937-81627956 MsG0780040723.01.T01:CDS 40.0%
TAATCATACCCTTGCCCTAA+TGG + Chr7:81625525-81625544 None:intergenic 40.0%
TACACAGATTGGACATCTTG+TGG - Chr7:81630552-81630571 MsG0780040723.01.T01:intron 40.0%
TACCAATTGAAACTGCTCCA+TGG - Chr7:81630441-81630460 MsG0780040723.01.T01:intron 40.0%
TCACACTCCCTTGTGATTAT+AGG + Chr7:81628145-81628164 None:intergenic 40.0%
TGATATGGTCAAGCATGAAG+GGG - Chr7:81628030-81628049 MsG0780040723.01.T01:CDS 40.0%
TGATTTCATGCCAAATCCTC+TGG + Chr7:81627043-81627062 None:intergenic 40.0%
TGTATGCAATACCTCAACAG+GGG + Chr7:81629919-81629938 None:intergenic 40.0%
TTCTCACCCTGGTTTAATAC+TGG - Chr7:81629478-81629497 MsG0780040723.01.T01:intron 40.0%
TTGGCATGAAATCAGTACTG+TGG - Chr7:81627049-81627068 MsG0780040723.01.T01:intron 40.0%
TTGGGAAATGGGTGATGATA+TGG - Chr7:81628015-81628034 MsG0780040723.01.T01:CDS 40.0%
TTTGAAGAGCTCTTCATCTC+AGG - Chr7:81627584-81627603 MsG0780040723.01.T01:CDS 40.0%
! AACCTGATGTGGTGTTAGTA+TGG - Chr7:81627122-81627141 MsG0780040723.01.T01:intron 40.0%
! ATAATCACAAGGGAGTGTGA+AGG - Chr7:81628145-81628164 MsG0780040723.01.T01:CDS 40.0%
! CTCAGTTTTCTGCTGGAATT+AGG - Chr7:81625858-81625877 MsG0780040723.01.T01:intron 40.0%
! CTTGGGGCTTACAATTTTGA+AGG - Chr7:81630023-81630042 MsG0780040723.01.T01:intron 40.0%
! GAGTTCTGGTGACCAATAAA+AGG + Chr7:81630652-81630671 None:intergenic 40.0%
! TAAGCTCCTTGATTCGATCT+TGG + Chr7:81628804-81628823 None:intergenic 40.0%
! TAATCACAAGGGAGTGTGAA+GGG - Chr7:81628146-81628165 MsG0780040723.01.T01:CDS 40.0%
! TGATAATGCTCAACACATCC+TGG + Chr7:81627851-81627870 None:intergenic 40.0%
! TGTGAACTACTTGAAGCACT+TGG - Chr7:81628322-81628341 MsG0780040723.01.T01:CDS 40.0%
! TTTGATTCGTGGAAACTTCG+CGG - Chr7:81630626-81630645 MsG0780040723.01.T01:intron 40.0%
!! AGAGCATCTTTTGGAAGCAA+TGG - Chr7:81628465-81628484 MsG0780040723.01.T01:intron 40.0%
!! ATCTCATCCAGAGCATCTTT+TGG - Chr7:81628456-81628475 MsG0780040723.01.T01:intron 40.0%
!! CTTAGAGAGTTGGTACCAAA+TGG - Chr7:81628820-81628839 MsG0780040723.01.T01:CDS 40.0%
!!! CTATTTTGATTGGTTGGCAC+AGG - Chr7:81628369-81628388 MsG0780040723.01.T01:CDS 40.0%
!!! TTTTTTTCAGCCGGATGTGA+AGG - Chr7:81627886-81627905 MsG0780040723.01.T01:CDS 40.0%
AAAACAGCAAGAAGAGGGCT+AGG - Chr7:81628734-81628753 MsG0780040723.01.T01:CDS 45.0%
AAACGAAGGATCTTAGGACG+AGG + Chr7:81625592-81625611 None:intergenic 45.0%
AAAGGGGGGAAGAATGAGAA+TGG + Chr7:81625806-81625825 None:intergenic 45.0%
AACGAAGGATCTTAGGACGA+GGG + Chr7:81625591-81625610 None:intergenic 45.0%
AAGAAAAACTCCCCCTGTTG+AGG - Chr7:81629905-81629924 MsG0780040723.01.T01:intron 45.0%
ACCAAGCCATTACAAGACTC+CGG - Chr7:81626227-81626246 MsG0780040723.01.T01:intron 45.0%
AGCAGAAGCTGTAAGAAGCT+TGG - Chr7:81630005-81630024 MsG0780040723.01.T01:intron 45.0%
ATATTATGGCGCTCAGGCAA+AGG + Chr7:81626705-81626724 None:intergenic 45.0%
CAGAAGCTGTAAGAAGCTTG+GGG - Chr7:81630007-81630026 MsG0780040723.01.T01:intron 45.0%
CAGGTAAGCTTCTTCGTACA+CGG - Chr7:81627603-81627622 MsG0780040723.01.T01:CDS 45.0%
CCCACCTTCAATCTGTTCTA+AGG + Chr7:81625445-81625464 None:intergenic 45.0%
CGGAAACTTCAACGGTGTAT+AGG + Chr7:81628296-81628315 None:intergenic 45.0%
CTCCATACTAACACCACATC+AGG + Chr7:81627127-81627146 None:intergenic 45.0%
CTGCAGGTGAATGAAGATAC+GGG - Chr7:81627480-81627499 MsG0780040723.01.T01:intron 45.0%
CTGTTGATACACAACGCTCT+TGG + Chr7:81630600-81630619 None:intergenic 45.0%
GAAGAGATATTATGGCGCTC+AGG + Chr7:81626711-81626730 None:intergenic 45.0%
GCAGAAGCTGTAAGAAGCTT+GGG - Chr7:81630006-81630025 MsG0780040723.01.T01:intron 45.0%
GCTGCAGGTGAATGAAGATA+CGG - Chr7:81627479-81627498 MsG0780040723.01.T01:intron 45.0%
GTATGCAATACCTCAACAGG+GGG + Chr7:81629918-81629937 None:intergenic 45.0%
GTCTTGCTCATTACAAGGGT+AGG + Chr7:81630711-81630730 None:intergenic 45.0%
GTTGGTACCAAATGGAGCTA+AGG - Chr7:81628828-81628847 MsG0780040723.01.T01:intron 45.0%
TCAAGTAGTTCACATCCAGC+CGG + Chr7:81628316-81628335 None:intergenic 45.0%
TCGCTAATATGGAAAGCGAG+TGG - Chr7:81627802-81627821 MsG0780040723.01.T01:CDS 45.0%
TGCAGGTGAATGAAGATACG+GGG - Chr7:81627481-81627500 MsG0780040723.01.T01:CDS 45.0%
TTGAGTGATGGTTGCAGTTC+TGG - Chr7:81628888-81628907 MsG0780040723.01.T01:intron 45.0%
TTGCAGGATCTTGACATTGG+AGG - Chr7:81625359-81625378 MsG0780040723.01.T01:three_prime_UTR 45.0%
TTGTCCTCTCTGACAAGAGA+AGG + Chr7:81628622-81628641 None:intergenic 45.0%
! AATCACAAGGGAGTGTGAAG+GGG - Chr7:81628147-81628166 MsG0780040723.01.T01:CDS 45.0%
! AATGAGCCGGAGTCTTGTAA+TGG + Chr7:81626236-81626255 None:intergenic 45.0%
! AGGAGGAATCCTTTTCCGAT+TGG + Chr7:81628276-81628295 None:intergenic 45.0%
! ATTTTATGCCTGCGTGCATG+AGG - Chr7:81627924-81627943 MsG0780040723.01.T01:CDS 45.0%
! GAAACTTCGCGGCCTTTTAT+TGG - Chr7:81630637-81630656 MsG0780040723.01.T01:CDS 45.0%
! TGGCAAACTCAGTTTTCTGC+TGG - Chr7:81625851-81625870 MsG0780040723.01.T01:intron 45.0%
! TTCTGAGCAGGGTTCAAGTT+GGG - Chr7:81629713-81629732 MsG0780040723.01.T01:intron 45.0%
! TTGACGCCCCTTCAATTTTC+TGG - Chr7:81627965-81627984 MsG0780040723.01.T01:CDS 45.0%
!! AAGTTCTGGCTTGTCTTCTG+AGG - Chr7:81625682-81625701 MsG0780040723.01.T01:three_prime_UTR 45.0%
!! AATGTGGAGCATCGGGAATT+TGG - Chr7:81628109-81628128 MsG0780040723.01.T01:CDS 45.0%
!! CCCGACCATTGATTTGAGAT+TGG - Chr7:81627677-81627696 MsG0780040723.01.T01:CDS 45.0%
!! CTGTTACTGGAAAGCATCAG+TGG - Chr7:81625633-81625652 MsG0780040723.01.T01:three_prime_UTR 45.0%
!! GATTTCAGTTTGCTGATGGG+TGG - Chr7:81625831-81625850 MsG0780040723.01.T01:intron 45.0%
!! GCATCTTTTGGAAGCAATGG+TGG - Chr7:81628468-81628487 MsG0780040723.01.T01:intron 45.0%
!! GTTTTATTCCTCATGCACGC+AGG + Chr7:81627935-81627954 None:intergenic 45.0%
AAGTTGGGCAGTTGAGGTAG+GGG - Chr7:81629728-81629747 MsG0780040723.01.T01:intron 50.0%
CAAGCTGAACAACGCCTAGT+GGG + Chr7:81626638-81626657 None:intergenic 50.0%
CATCCAGCCGGAAACTTCAA+CGG + Chr7:81628304-81628323 None:intergenic 50.0%
CCATCCTTCTCTTGTCAGAG+AGG - Chr7:81628615-81628634 MsG0780040723.01.T01:intron 50.0%
CCTCTCTGACAAGAGAAGGA+TGG + Chr7:81628618-81628637 None:intergenic 50.0%
GCAGGTGAATGAAGATACGG+GGG - Chr7:81627482-81627501 MsG0780040723.01.T01:CDS 50.0%
GCTACTGGAACCAGAGGATT+TGG - Chr7:81627030-81627049 MsG0780040723.01.T01:intron 50.0%
GGGGGAAGAATGAGAATGGT+TGG + Chr7:81625802-81625821 None:intergenic 50.0%
GTTGGACAGGTAGCTGTTAC+TGG - Chr7:81625620-81625639 MsG0780040723.01.T01:three_prime_UTR 50.0%
GTTGTGTCTGTAGTCCCACT+AGG - Chr7:81626621-81626640 MsG0780040723.01.T01:CDS 50.0%
TCTTCATTCACCTGCAGCAG+CGG + Chr7:81627477-81627496 None:intergenic 50.0%
TGAACCCTGCTCAGAACTAG+AGG + Chr7:81629709-81629728 None:intergenic 50.0%
TGGATCAGTTGCCTGTCTCT+TGG + Chr7:81628784-81628803 None:intergenic 50.0%
! ATCACAAGGGAGTGTGAAGG+GGG - Chr7:81628148-81628167 MsG0780040723.01.T01:CDS 50.0%
! CAAGTTGGGCAGTTGAGGTA+GGG - Chr7:81629727-81629746 MsG0780040723.01.T01:intron 50.0%
! CGCCCCTTCAATTTTCTGGA+AGG - Chr7:81627969-81627988 MsG0780040723.01.T01:CDS 50.0%
! GAGTAGCTGATTTCTCACCC+TGG - Chr7:81629467-81629486 MsG0780040723.01.T01:intron 50.0%
! GTTCTGAGCAGGGTTCAAGT+TGG - Chr7:81629712-81629731 MsG0780040723.01.T01:intron 50.0%
!! GGATCCTCTAGTTCTGAGCA+GGG - Chr7:81629702-81629721 MsG0780040723.01.T01:intron 50.0%
!! GGTTGCAGTTCTGGTTCATG+TGG - Chr7:81628897-81628916 MsG0780040723.01.T01:intron 50.0%
!! TACACATGACGCTTTGGGGT+TGG - Chr7:81625470-81625489 MsG0780040723.01.T01:three_prime_UTR 50.0%
!! TCAAGTTGGGCAGTTGAGGT+AGG - Chr7:81629726-81629745 MsG0780040723.01.T01:intron 50.0%
!! TGGATCCTCTAGTTCTGAGC+AGG - Chr7:81629701-81629720 MsG0780040723.01.T01:intron 50.0%
ACACCGTTGAAGTTTCCGGC+TGG - Chr7:81628298-81628317 MsG0780040723.01.T01:CDS 55.0%
AGCTTCTTCGTACACGGACC+TGG - Chr7:81627609-81627628 MsG0780040723.01.T01:CDS 55.0%
AGTTGGGCAGTTGAGGTAGG+GGG - Chr7:81629729-81629748 MsG0780040723.01.T01:intron 55.0%
CCAAGCTGAACAACGCCTAG+TGG + Chr7:81626639-81626658 None:intergenic 55.0%
CCGAGGTCTACAACTTTCCC+CGG + Chr7:81628761-81628780 None:intergenic 55.0%
CCGGGGAAAGTTGTAGACCT+CGG - Chr7:81628758-81628777 MsG0780040723.01.T01:CDS 55.0%
CGAGGTCTACAACTTTCCCC+GGG + Chr7:81628760-81628779 None:intergenic 55.0%
CTTCATTCACCTGCAGCAGC+GGG + Chr7:81627476-81627495 None:intergenic 55.0%
GTACGCGTGAGTATGACCTG+TGG - Chr7:81629816-81629835 MsG0780040723.01.T01:intron 55.0%
! CCACTAGGCGTTGTTCAGCT+TGG - Chr7:81626636-81626655 MsG0780040723.01.T01:CDS 55.0%
! GCCGGAGTCTTGTAATGGCT+TGG + Chr7:81626231-81626250 None:intergenic 55.0%
!! GGGTTCAAGTTGGGCAGTTG+AGG - Chr7:81629722-81629741 MsG0780040723.01.T01:intron 55.0%
AGCAAGAAGAGGGCTAGGCC+CGG - Chr7:81628739-81628758 MsG0780040723.01.T01:CDS 60.0%
AGTTGCCTGTCTCTTGGCCG+AGG + Chr7:81628778-81628797 None:intergenic 60.0%
GAGTGTGAAGGGGGCAGTAG+TGG - Chr7:81628157-81628176 MsG0780040723.01.T01:CDS 60.0%
GTAGACCTCGGCCAAGAGAC+AGG - Chr7:81628770-81628789 MsG0780040723.01.T01:CDS 60.0%
! TTTTTGCCACCCGCTGCTGC+AGG - Chr7:81627464-81627483 MsG0780040723.01.T01:intron 60.0%
CAAGAAGAGGGCTAGGCCCG+GGG - Chr7:81628741-81628760 MsG0780040723.01.T01:CDS 65.0%
CATTCACCTGCAGCAGCGGG+TGG + Chr7:81627473-81627492 None:intergenic 65.0%
GCAAGAAGAGGGCTAGGCCC+GGG - Chr7:81628740-81628759 MsG0780040723.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 81625336 81630994 81625336 ID=MsG0780040723.01;Name=MsG0780040723.01
Chr7 mRNA 81625336 81630994 81625336 ID=MsG0780040723.01.T01;Parent=MsG0780040723.01;Name=MsG0780040723.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0.87|0.88|1|1|1|9|372|622
Chr7 exon 81625336 81625797 81625336 ID=MsG0780040723.01.T01:exon:38149;Parent=MsG0780040723.01.T01
Chr7 exon 81626235 81626360 81626235 ID=MsG0780040723.01.T01:exon:38148;Parent=MsG0780040723.01.T01
Chr7 exon 81626515 81626655 81626515 ID=MsG0780040723.01.T01:exon:38147;Parent=MsG0780040723.01.T01
Chr7 exon 81627276 81627383 81627276 ID=MsG0780040723.01.T01:exon:38146;Parent=MsG0780040723.01.T01
Chr7 exon 81627481 81628434 81627481 ID=MsG0780040723.01.T01:exon:38145;Parent=MsG0780040723.01.T01
Chr7 exon 81628725 81628844 81628725 ID=MsG0780040723.01.T01:exon:38144;Parent=MsG0780040723.01.T01
Chr7 exon 81630450 81630491 81630450 ID=MsG0780040723.01.T01:exon:38143;Parent=MsG0780040723.01.T01
Chr7 exon 81630627 81630714 81630627 ID=MsG0780040723.01.T01:exon:38142;Parent=MsG0780040723.01.T01
Chr7 exon 81630795 81630994 81630795 ID=MsG0780040723.01.T01:exon:38141;Parent=MsG0780040723.01.T01
Chr7 CDS 81630795 81630994 81630795 ID=MsG0780040723.01.T01:cds;Parent=MsG0780040723.01.T01
Chr7 CDS 81630627 81630714 81630627 ID=MsG0780040723.01.T01:cds;Parent=MsG0780040723.01.T01
Chr7 CDS 81630450 81630491 81630450 ID=MsG0780040723.01.T01:cds;Parent=MsG0780040723.01.T01
Chr7 CDS 81628725 81628844 81628725 ID=MsG0780040723.01.T01:cds;Parent=MsG0780040723.01.T01
Chr7 CDS 81627481 81628434 81627481 ID=MsG0780040723.01.T01:cds;Parent=MsG0780040723.01.T01
Chr7 CDS 81627276 81627383 81627276 ID=MsG0780040723.01.T01:cds;Parent=MsG0780040723.01.T01
Chr7 CDS 81626515 81626655 81626515 ID=MsG0780040723.01.T01:cds;Parent=MsG0780040723.01.T01
Chr7 CDS 81626235 81626360 81626235 ID=MsG0780040723.01.T01:cds;Parent=MsG0780040723.01.T01
Chr7 CDS 81625708 81625797 81625708 ID=MsG0780040723.01.T01:cds;Parent=MsG0780040723.01.T01
Chr7 three_prime_UTR 81625336 81625707 81625336 ID=MsG0780040723.01.T01:three_prime_utr;Parent=MsG0780040723.01.T01
Gene Sequence

>MsG0780040723.01.T01

ATGTGGTATTTTTTTTTTTTTTTTTGCAGGATCTTGACATTGGAGGATGCTTACTATGACAATTCAGATTATTTTGACGCTTCAGAAAATAAGTACTGTCAGAAGACCTTAGAACAGATTGAAGGTGGGAAATTTACACATGACGCTTTGGGGTTGGCTGTCGCAAAGATGTCATATAATGCATATCCATTAGGGCAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAGCATCAGTGGATCTGTGCAGATAATAATCAAGTTACAAGTTCTGGCTTGTCTTCTGAGTTTGCTGATGGGTGGCAAACTCAGTTTTCTGCTGGAATTAGGGTGAATGAAGATACGGGGGTTGTTAATCATATAAGAAATCTTTTTTTGTCTACTCAAGATTACTCAATAGACCACATTCCTAGTCAAATACAAAGTAGTTTGAAGAGCTCTTCATCTCAGCCGGATGTGAAGGAAAAATCATCTTCGGATTTTATGCCTGCGTGCATGAGGAATAAAACAGCGGATGTTTTGACGCCCCTTCAATTTTCTGGAAGGAACAACACAACTCATTCTGCTTATTGGGAAATGGGTGATGATATGGTCAAGCATGAAGGGGACGAGCTCTATAGTGATGTGAGTCCCATTTTGCTTCAGTCAATGTCAGATATGATTAATGTGGAGCATCGGGAATTTGGAGAGATAAGACCTATAATCACAAGGGAGTGTGAAGGGGGCAGTAGTGGCTGCAAAAATATGATATTGGACTCGGAACAAAATCGCTCATCATTTTTAAACAATTCTGCTACAAATAATGTTGGCGTCTATGATTTAATACACCAATCGGAAAAGGATTCCTCCTATACACCGTTGAAGTTTCCGGCTGGATGTGAACTACTTGAAGCACTTGGACCATCTTCTTTGAAAGGGAGTAACTATTTTGATTGGTTGGCACAGGTTAATCAAGATATGAAAATTGTGGATGTGCCTGATGTGTTTAACACTAGTCAGTTGACATCTGAATCTCATCCAGAGCATCTTTTGGAAGCAATGGTGGCCAACATCTGTCACAGTAGTAATAATGATGTTAATAGTGAATTATCATTTTGTAGATCAATGCAATCTGCATTGAGTTCTGGAAAAACAACCGATGCTTCTATTCAAGATGTGCACACTATAGACCATCCTTCTCTTGTCAGAGAGGACAAAAACCATTGTTTGAGTTCATCATCTAAAGTTGTTTCTTCTACATGTCCCAGTGCTTGTAGTGAACAATTTGAAAGATCTTCTGAACCATCTAAAAACAGCAAGAAGAGGGCTAGGCCCGGGGAAAGTTGTAGACCTCGGCCAAGAGACAGGCAACTGATCCAAGATCGAATCAAGGAGCTTAGAGAGTTGGTACCAAATGGAGCTAAGTGTAGTATTGATTCACTACTGGAGCGCTCGATAAAGCACATGCTCTTTCTGCAAAGCATAACTAAGCATGCTGACAAGCTAACTAAACTTGCTGATACTAAATCAAAGTTGCATCAAATGGAAACAGACATTCTTGGATCCTCTAGTTCTGAGCAGGGTTCAAGTTGGGCAGTTGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAAAATCTTAGCAACAACAGACAGATGCTTATTGAGACGCTATGTGAAGAGAGCAGCCATTTTCTTGAAATAGCAGAAGCTGTAAGAAGCTTGGGGCTTACAATTTTGAAGGGTGCAACAAAAGCTCGTGATAAGAAGATATCGATATGCTTTATCGTTGAGGGTGAAAACAACAGAAATGTACACAGATTGGACATCTTGTGGCCACTTGTTCAGATACTACAATCCAAGAGCGTTGTGTATCAACAGTAA

Protein sequence

>MsG0780040723.01.T01

MWYFFFFFCRILTLEDAYYDNSDYFDASENKYCQKTLEQIEGGKFTHDALGLAVAKMSYNAYPLGQGIVGQVAVTGKHQWICADNNQVTSSGLSSEFADGWQTQFSAGIRVNEDTGVVNHIRNLFLSTQDYSIDHIPSQIQSSLKSSSSQPDVKEKSSSDFMPACMRNKTADVLTPLQFSGRNNTTHSAYWEMGDDMVKHEGDELYSDVSPILLQSMSDMINVEHREFGEIRPIITRECEGGSSGCKNMILDSEQNRSSFLNNSATNNVGVYDLIHQSEKDSSYTPLKFPAGCELLEALGPSSLKGSNYFDWLAQVNQDMKIVDVPDVFNTSQLTSESHPEHLLEAMVANICHSSNNDVNSELSFCRSMQSALSSGKTTDASIQDVHTIDHPSLVREDKNHCLSSSSKVVSSTCPSACSEQFERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERSIKHMLFLQSITKHADKLTKLADTKSKLHQMETDILGSSSSEQGSSWAVEVGGHLKVHSILVENLSNNRQMLIETLCEESSHFLEIAEAVRSLGLTILKGATKARDKKISICFIVEGENNRNVHRLDILWPLVQILQSKSVVYQQ*