Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029626.01.T01 | XP_003617275.1 | 99.522 | 209 | 1 | 0 | 1 | 209 | 1 | 209 | 5.02E-152 | 430 |
MsG0580029626.01.T02 | XP_003617275.1 | 99.401 | 167 | 1 | 0 | 1 | 167 | 43 | 209 | 3.80E-119 | 345 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029626.01.T01 | G7K362 | 99.522 | 209 | 1 | 0 | 1 | 209 | 1 | 209 | 2.40e-152 | 430 |
MsG0580029626.01.T02 | G7K362 | 99.401 | 167 | 1 | 0 | 1 | 167 | 43 | 209 | 1.81e-119 | 345 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048036.01 | MsG0580029626.01 | 0.848990 | 4.307746e-60 | 8.048823e-57 |
MsG0080048347.01 | MsG0580029626.01 | 0.835881 | 1.295744e-56 | 1.605724e-53 |
MsG0080048349.01 | MsG0580029626.01 | 0.819298 | 1.250082e-52 | 9.581555e-50 |
MsG0080048350.01 | MsG0580029626.01 | 0.801123 | 1.044497e-48 | 4.948834e-46 |
MsG0080048352.01 | MsG0580029626.01 | 0.841223 | 5.413599e-58 | 7.900670e-55 |
MsG0080048967.01 | MsG0580029626.01 | 0.807821 | 4.191225e-50 | 2.357812e-47 |
MsG0180000019.01 | MsG0580029626.01 | 0.814090 | 1.839134e-51 | 1.222414e-48 |
MsG0180000234.01 | MsG0580029626.01 | 0.832097 | 1.148197e-55 | 1.270442e-52 |
MsG0180002274.01 | MsG0580029626.01 | 0.800653 | 1.302793e-48 | 6.099431e-46 |
MsG0180003240.01 | MsG0580029626.01 | 0.869466 | 3.031587e-66 | 1.139040e-62 |
MsG0180003248.01 | MsG0580029626.01 | 0.814479 | 1.508598e-51 | 1.013430e-48 |
MsG0180003249.01 | MsG0580029626.01 | 0.826887 | 2.119155e-54 | 2.013177e-51 |
MsG0180003250.01 | MsG0580029626.01 | 0.843382 | 1.449876e-58 | 2.264738e-55 |
MsG0180004203.01 | MsG0580029626.01 | 0.872704 | 2.591562e-67 | 1.095254e-63 |
MsG0180004328.01 | MsG0580029626.01 | 0.846305 | 2.360980e-59 | 4.045916e-56 |
MsG0180004562.01 | MsG0580029626.01 | 0.820533 | 6.523483e-53 | 5.175233e-50 |
MsG0180005356.01 | MsG0580029626.01 | 0.829587 | 4.734558e-55 | 4.866889e-52 |
MsG0180005357.01 | MsG0580029626.01 | 0.816957 | 4.230274e-52 | 3.040673e-49 |
MsG0180005358.01 | MsG0580029626.01 | 0.804046 | 2.606853e-49 | 1.330655e-46 |
MsG0180005648.01 | MsG0580029626.01 | 0.854296 | 1.353129e-61 | 3.007930e-58 |
MsG0280010802.01 | MsG0580029626.01 | 0.852274 | 5.140406e-61 | 1.068652e-57 |
MsG0280011042.01 | MsG0580029626.01 | 0.822479 | 2.316989e-53 | 1.941651e-50 |
MsG0280011165.01 | MsG0580029626.01 | 0.808313 | 3.292605e-50 | 1.876526e-47 |
MsG0280011193.01 | MsG0580029626.01 | 0.807596 | 4.679711e-50 | 2.617074e-47 |
MsG0280011203.01 | MsG0580029626.01 | 0.808582 | 2.884919e-50 | 1.655706e-47 |
MsG0380011613.01 | MsG0580029626.01 | 0.863665 | 2.116119e-64 | 6.466673e-61 |
MsG0380012654.01 | MsG0580029626.01 | 0.810333 | 1.214462e-50 | 7.300073e-48 |
MsG0380013300.01 | MsG0580029626.01 | 0.851192 | 1.041468e-60 | 2.091388e-57 |
MsG0380013449.01 | MsG0580029626.01 | 0.847043 | 1.484282e-59 | 2.605050e-56 |
MsG0380013452.01 | MsG0580029626.01 | 0.848779 | 4.929616e-60 | 9.147877e-57 |
MsG0380013458.01 | MsG0580029626.01 | 0.823281 | 1.507078e-53 | 1.291898e-50 |
MsG0480020497.01 | MsG0580029626.01 | 0.857256 | 1.847740e-62 | 4.532346e-59 |
MsG0480021697.01 | MsG0580029626.01 | 0.800752 | 1.243639e-48 | 5.836943e-46 |
MsG0480023107.01 | MsG0580029626.01 | 0.832053 | 1.176997e-55 | 1.300727e-52 |
MsG0480023349.01 | MsG0580029626.01 | 0.834700 | 2.575197e-56 | 3.079706e-53 |
MsG0480023921.01 | MsG0580029626.01 | 0.833828 | 4.262426e-56 | 4.966849e-53 |
MsG0580024408.01 | MsG0580029626.01 | 0.826446 | 2.700527e-54 | 2.533219e-51 |
MsG0580025683.01 | MsG0580029626.01 | 0.813802 | 2.128638e-51 | 1.403884e-48 |
MsG0580025870.01 | MsG0580029626.01 | 0.800137 | 1.659234e-48 | 7.667195e-46 |
MsG0380016020.01 | MsG0580029626.01 | 0.842340 | 2.745896e-58 | 4.150700e-55 |
MsG0380017151.01 | MsG0580029626.01 | 0.823635 | 1.245525e-53 | 1.078487e-50 |
MsG0380017690.01 | MsG0580029626.01 | 0.806626 | 7.508656e-50 | 4.094883e-47 |
MsG0380017754.01 | MsG0580029626.01 | 0.800434 | 1.443867e-48 | 6.722510e-46 |
MsG0580027646.01 | MsG0580029626.01 | 0.812978 | 3.230134e-51 | 2.083154e-48 |
MsG0580028999.01 | MsG0580029626.01 | 0.837396 | 5.329676e-57 | 6.913617e-54 |
MsG0580029555.01 | MsG0580029626.01 | 0.828731 | 7.635904e-55 | 7.654115e-52 |
MsG0580029626.01 | MsG0580030133.01 | 0.833774 | 4.395360e-56 | 5.113181e-53 |
MsG0580029626.01 | MsG0580030135.01 | 0.840505 | 8.350337e-58 | 1.191974e-54 |
MsG0580029626.01 | MsG0680031429.01 | 0.805268 | 1.449191e-49 | 7.633235e-47 |
MsG0580029626.01 | MsG0680035496.01 | 0.802659 | 5.051946e-49 | 2.488578e-46 |
MsG0580029626.01 | MsG0780036661.01 | 0.811956 | 5.402012e-51 | 3.390105e-48 |
MsG0580029626.01 | MsG0780038939.01 | 0.823192 | 1.581361e-53 | 1.352176e-50 |
MsG0580029626.01 | MsG0780039334.01 | 0.816121 | 6.510163e-52 | 4.573200e-49 |
MsG0580029626.01 | MsG0780039968.01 | 0.834724 | 2.539340e-56 | 3.038962e-53 |
MsG0580029626.01 | MsG0780039978.01 | 0.804944 | 1.693913e-49 | 8.849227e-47 |
MsG0580029626.01 | MsG0780041177.01 | 0.813461 | 2.530075e-51 | 1.653393e-48 |
MsG0580029626.01 | MsG0780041316.01 | 0.811523 | 6.708501e-51 | 4.162051e-48 |
MsG0580029626.01 | MsG0780041556.01 | 0.822748 | 2.006606e-53 | 1.694541e-50 |
MsG0580029626.01 | MsG0880042740.01 | 0.821937 | 3.096039e-53 | 2.554481e-50 |
MsG0580029626.01 | MsG0880043744.01 | 0.800298 | 1.538843e-48 | 7.140207e-46 |
MsG0580029626.01 | MsG0880043828.01 | 0.847298 | 1.263265e-59 | 2.235073e-56 |
MsG0580029626.01 | MsG0880045272.01 | 0.837246 | 5.820752e-57 | 7.515830e-54 |
MsG0580029626.01 | MsG0880045677.01 | 0.802004 | 6.889572e-49 | 3.337721e-46 |
MsG0580029626.01 | MsG0880046429.01 | 0.859752 | 3.327291e-63 | 8.883137e-60 |
MsG0580029626.01 | MsG0880046996.01 | 0.840295 | 9.478198e-58 | 1.344081e-54 |
MsG0580029626.01 | MsG0880047665.01 | 0.833179 | 6.188104e-56 | 7.071419e-53 |
MsG0580029626.01 | MsG0880047747.01 | 0.864075 | 1.578641e-64 | 4.893455e-61 |
MsG0280007216.01 | MsG0580029626.01 | 0.800985 | 1.114441e-48 | 5.262105e-46 |
MsG0280008405.01 | MsG0580029626.01 | 0.840880 | 6.661106e-58 | 9.619550e-55 |
MsG0280009394.01 | MsG0580029626.01 | 0.805230 | 1.475491e-49 | 7.764512e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029626.01.T01 | MTR_5g089820 | 99.522 | 209 | 1 | 0 | 1 | 209 | 1 | 209 | 6.09e-156 | 430 |
MsG0580029626.01.T01 | MTR_3g045790 | 57.143 | 224 | 74 | 5 | 1 | 206 | 1 | 220 | 4.57e-79 | 236 |
MsG0580029626.01.T02 | MTR_5g089820 | 99.401 | 167 | 1 | 0 | 1 | 167 | 43 | 209 | 4.60e-123 | 345 |
MsG0580029626.01.T02 | MTR_3g045790 | 61.538 | 169 | 57 | 3 | 1 | 164 | 55 | 220 | 1.54e-64 | 197 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029626.01.T01 | AT5G12340 | 45.161 | 217 | 104 | 6 | 1 | 203 | 4 | 219 | 6.39e-57 | 180 |
MsG0580029626.01.T01 | AT5G12340 | 45.161 | 217 | 104 | 6 | 1 | 203 | 1 | 216 | 6.72e-57 | 179 |
MsG0580029626.01.T01 | AT1G28190 | 31.980 | 197 | 115 | 7 | 8 | 189 | 24 | 216 | 4.15e-18 | 80.5 |
MsG0580029626.01.T02 | AT5G12340 | 45.930 | 172 | 82 | 3 | 1 | 161 | 45 | 216 | 1.49e-48 | 157 |
MsG0580029626.01.T02 | AT5G12340 | 45.930 | 172 | 82 | 3 | 1 | 161 | 48 | 219 | 1.84e-48 | 156 |
MsG0580029626.01.T02 | AT1G28190 | 35.443 | 158 | 85 | 6 | 3 | 147 | 63 | 216 | 3.34e-16 | 73.9 |
Find 47 sgRNAs with CRISPR-Local
Find 52 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATAGTGAAGCTCATATTT+TGG | 0.192859 | 5:-99735535 | MsG0580029626.01.T01:CDS |
AATAAATCTCCTATCAAATT+TGG | 0.198099 | 5:-99735281 | MsG0580029626.01.T01:CDS |
CATGCAGATTCATTCTTTAT+AGG | 0.237470 | 5:-99735434 | MsG0580029626.01.T01:CDS |
AATTTGATAGGAGATTTATT+AGG | 0.241649 | 5:+99735284 | None:intergenic |
GCATGGCAAACCATCATTTC+AGG | 0.257274 | 5:+99735452 | None:intergenic |
CAATGGAAGGGTGGTTATTA+AGG | 0.314334 | 5:-99735228 | MsG0580029626.01.T01:CDS |
TTCATAACTGGTCTCATCTA+TGG | 0.330358 | 5:-99735194 | MsG0580029626.01.T01:CDS |
AAGCATAAGTTCATCATCTA+TGG | 0.331093 | 5:+99735391 | None:intergenic |
GTTTCTTCAATCTCAGCCTT+TGG | 0.341027 | 5:-99735314 | MsG0580029626.01.T01:CDS |
ATTTGATAGGAGATTTATTA+GGG | 0.342798 | 5:+99735285 | None:intergenic |
TCTATGGATAAAACTGGAAT+TGG | 0.343829 | 5:+99735407 | None:intergenic |
GTCAATAGGTAGAACAAAAT+AGG | 0.345919 | 5:+99735361 | None:intergenic |
GGACACTTTCCAAATTTGAT+AGG | 0.346156 | 5:+99735272 | None:intergenic |
TCATCATCTATGGATAAAAC+TGG | 0.368150 | 5:+99735401 | None:intergenic |
GACAAAGAGATGAATAATAA+TGG | 0.383011 | 5:-99735170 | MsG0580029626.01.T01:CDS |
TGAAGCACTTGTGAAGTCTA+AGG | 0.390685 | 5:-99735093 | MsG0580029626.01.T01:CDS |
CACCATGTAGGTTCATAGAA+TGG | 0.422599 | 5:-99735016 | MsG0580029626.01.T01:CDS |
GTCATGCCTGAGTTCATAAC+TGG | 0.429481 | 5:-99735206 | MsG0580029626.01.T01:CDS |
TCAATAGCAAAACGGTCAAT+AGG | 0.432890 | 5:+99735347 | None:intergenic |
CTTAATAACCACCCTTCCAT+TGG | 0.438233 | 5:+99735229 | None:intergenic |
ACCTAAGCTTGAAACTATTA+CGG | 0.439428 | 5:-99735057 | MsG0580029626.01.T01:CDS |
GAACCTTTCAAGTATTCAAA+AGG | 0.440181 | 5:+99735251 | None:intergenic |
CTATTACGGAATACAAGGTT+AGG | 0.448385 | 5:-99735043 | MsG0580029626.01.T01:CDS |
ACTTGTGAAGTCTAAGGATC+AGG | 0.453382 | 5:-99735087 | MsG0580029626.01.T01:CDS |
TCCGTAATAGTTTCAAGCTT+AGG | 0.455784 | 5:+99735056 | None:intergenic |
GTTTGAATTCCCTGAAATGA+TGG | 0.466091 | 5:-99735462 | MsG0580029626.01.T01:CDS |
ATATTCTAGTACAATTCCAT+TGG | 0.480545 | 5:+99734978 | None:intergenic |
AAAGGCTGAGATTGAAGAAA+CGG | 0.491689 | 5:+99735316 | None:intergenic |
TGAAGTCTAAGGATCAGGTT+TGG | 0.504412 | 5:-99735082 | MsG0580029626.01.T01:CDS |
ACTTGAAAGGTTCCAATGGA+AGG | 0.512308 | 5:-99735241 | MsG0580029626.01.T01:CDS |
TTGAAAGGAAAACATATAGC+TGG | 0.514354 | 5:-99735494 | MsG0580029626.01.T01:CDS |
CATGGCAAACCATCATTTCA+GGG | 0.514889 | 5:+99735453 | None:intergenic |
TTCCATTCTATGAACCTACA+TGG | 0.528445 | 5:+99735014 | None:intergenic |
ATAGATGATGAACTTATGCT+TGG | 0.532191 | 5:-99735389 | MsG0580029626.01.T01:CDS |
TGAAACTATTACGGAATACA+AGG | 0.550666 | 5:-99735048 | MsG0580029626.01.T01:CDS |
TTTATTAGGGCAAGATCCAA+AGG | 0.577719 | 5:+99735298 | None:intergenic |
AATGGAACATCTTATAGCAA+CGG | 0.589229 | 5:-99735152 | MsG0580029626.01.T01:CDS |
TCAACTCAGGAGTACTACAA+AGG | 0.592292 | 5:+99735126 | None:intergenic |
GGAACATCAAGATCATTGAA+AGG | 0.592545 | 5:-99735509 | MsG0580029626.01.T01:CDS |
ATGAGACCAGTTATGAACTC+AGG | 0.594937 | 5:+99735200 | None:intergenic |
CTATAAAGAATGAATCTGCA+TGG | 0.598159 | 5:+99735435 | None:intergenic |
GAATACTTGAAAGGTTCCAA+TGG | 0.604457 | 5:-99735245 | MsG0580029626.01.T01:CDS |
CTTGAAAGGTTCCAATGGAA+GGG | 0.607365 | 5:-99735240 | MsG0580029626.01.T01:CDS |
AGAGGGTGTCAATAGCAAAA+CGG | 0.607923 | 5:+99735339 | None:intergenic |
TGAGATTGAAGAAACGGAGA+GGG | 0.609349 | 5:+99735322 | None:intergenic |
GAAAGGTTCCAATGGAAGGG+TGG | 0.636346 | 5:-99735237 | MsG0580029626.01.T01:CDS |
CTGAGATTGAAGAAACGGAG+AGG | 0.683456 | 5:+99735321 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAATCTCCTATCAAATT+TGG | - | Chr5:99735292-99735311 | MsG0580029626.01.T01:CDS | 20.0% |
!! | AATTTGATAGGAGATTTATT+AGG | + | Chr5:99735292-99735311 | None:intergenic | 20.0% |
!! | ATTTGATAGGAGATTTATTA+GGG | + | Chr5:99735291-99735310 | None:intergenic | 20.0% |
! | GACAAAGAGATGAATAATAA+TGG | - | Chr5:99735403-99735422 | MsG0580029626.01.T01:CDS | 25.0% |
!! | AATAGTGAAGCTCATATTTT+GGG | - | Chr5:99735039-99735058 | MsG0580029626.01.T01:CDS | 25.0% |
!!! | TCATAATGTTTTTTCAACTC+AGG | + | Chr5:99735463-99735482 | None:intergenic | 25.0% |
AAGCATAAGTTCATCATCTA+TGG | + | Chr5:99735185-99735204 | None:intergenic | 30.0% | |
AATGGAACATCTTATAGCAA+CGG | - | Chr5:99735421-99735440 | MsG0580029626.01.T01:CDS | 30.0% | |
ACCTAAGCTTGAAACTATTA+CGG | - | Chr5:99735516-99735535 | MsG0580029626.01.T01:CDS | 30.0% | |
ATAGATGATGAACTTATGCT+TGG | - | Chr5:99735184-99735203 | MsG0580029626.01.T01:CDS | 30.0% | |
CATGCAGATTCATTCTTTAT+AGG | - | Chr5:99735139-99735158 | MsG0580029626.01.T01:CDS | 30.0% | |
CTATAAAGAATGAATCTGCA+TGG | + | Chr5:99735141-99735160 | None:intergenic | 30.0% | |
GTCAATAGGTAGAACAAAAT+AGG | + | Chr5:99735215-99735234 | None:intergenic | 30.0% | |
TCATCATCTATGGATAAAAC+TGG | + | Chr5:99735175-99735194 | None:intergenic | 30.0% | |
TCTATGGATAAAACTGGAAT+TGG | + | Chr5:99735169-99735188 | None:intergenic | 30.0% | |
TGAAACTATTACGGAATACA+AGG | - | Chr5:99735525-99735544 | MsG0580029626.01.T01:CDS | 30.0% | |
TTGAAAGGAAAACATATAGC+TGG | - | Chr5:99735079-99735098 | MsG0580029626.01.T01:CDS | 30.0% | |
! | CAATAGTGAAGCTCATATTT+TGG | - | Chr5:99735038-99735057 | MsG0580029626.01.T01:CDS | 30.0% |
! | GAACCTTTCAAGTATTCAAA+AGG | + | Chr5:99735325-99735344 | None:intergenic | 30.0% |
! | TGTCCTTTTGAATACTTGAA+AGG | - | Chr5:99735319-99735338 | MsG0580029626.01.T01:CDS | 30.0% |
AAAGGCTGAGATTGAAGAAA+CGG | + | Chr5:99735260-99735279 | None:intergenic | 35.0% | |
CTATTACGGAATACAAGGTT+AGG | - | Chr5:99735530-99735549 | MsG0580029626.01.T01:CDS | 35.0% | |
GAAAGAAAAAGAGAAGCCAA+TGG | - | Chr5:99735579-99735598 | MsG0580029626.01.T01:CDS | 35.0% | |
GAATACTTGAAAGGTTCCAA+TGG | - | Chr5:99735328-99735347 | MsG0580029626.01.T01:CDS | 35.0% | |
GGAACATCAAGATCATTGAA+AGG | - | Chr5:99735064-99735083 | MsG0580029626.01.T01:CDS | 35.0% | |
GGACACTTTCCAAATTTGAT+AGG | + | Chr5:99735304-99735323 | None:intergenic | 35.0% | |
GTTTGAATTCCCTGAAATGA+TGG | - | Chr5:99735111-99735130 | MsG0580029626.01.T01:CDS | 35.0% | |
TCAATAGCAAAACGGTCAAT+AGG | + | Chr5:99735229-99735248 | None:intergenic | 35.0% | |
TCCGTAATAGTTTCAAGCTT+AGG | + | Chr5:99735520-99735539 | None:intergenic | 35.0% | |
TTCCATTCTATGAACCTACA+TGG | + | Chr5:99735562-99735581 | None:intergenic | 35.0% | |
TTTATTAGGGCAAGATCCAA+AGG | + | Chr5:99735278-99735297 | None:intergenic | 35.0% | |
! | TTCATAACTGGTCTCATCTA+TGG | - | Chr5:99735379-99735398 | MsG0580029626.01.T01:CDS | 35.0% |
ACTTGAAAGGTTCCAATGGA+AGG | - | Chr5:99735332-99735351 | MsG0580029626.01.T01:CDS | 40.0% | |
ACTTGTGAAGTCTAAGGATC+AGG | - | Chr5:99735486-99735505 | MsG0580029626.01.T01:CDS | 40.0% | |
ATGAGACCAGTTATGAACTC+AGG | + | Chr5:99735376-99735395 | None:intergenic | 40.0% | |
CAATGGAAGGGTGGTTATTA+AGG | - | Chr5:99735345-99735364 | MsG0580029626.01.T01:CDS | 40.0% | |
CACCATGTAGGTTCATAGAA+TGG | - | Chr5:99735557-99735576 | MsG0580029626.01.T01:CDS | 40.0% | |
CATGGCAAACCATCATTTCA+GGG | + | Chr5:99735123-99735142 | None:intergenic | 40.0% | |
CTTAATAACCACCCTTCCAT+TGG | + | Chr5:99735347-99735366 | None:intergenic | 40.0% | |
CTTGAAAGGTTCCAATGGAA+GGG | - | Chr5:99735333-99735352 | MsG0580029626.01.T01:CDS | 40.0% | |
GTTTCTTCAATCTCAGCCTT+TGG | - | Chr5:99735259-99735278 | MsG0580029626.01.T01:CDS | 40.0% | |
TGAAGTCTAAGGATCAGGTT+TGG | - | Chr5:99735491-99735510 | MsG0580029626.01.T01:CDS | 40.0% | |
TGAGATTGAAGAAACGGAGA+GGG | + | Chr5:99735254-99735273 | None:intergenic | 40.0% | |
! | AGGTTAGGTTTTCACCATGT+AGG | - | Chr5:99735545-99735564 | MsG0580029626.01.T01:CDS | 40.0% |
! | TGAAGCACTTGTGAAGTCTA+AGG | - | Chr5:99735480-99735499 | MsG0580029626.01.T01:CDS | 40.0% |
!! | AGAGGGTGTCAATAGCAAAA+CGG | + | Chr5:99735237-99735256 | None:intergenic | 40.0% |
!! | GTGAAGCTCATATTTTGGGA+AGG | - | Chr5:99735043-99735062 | MsG0580029626.01.T01:CDS | 40.0% |
!! | TCAACTCAGGAGTACTACAA+AGG | + | Chr5:99735450-99735469 | None:intergenic | 40.0% |
CTGAGATTGAAGAAACGGAG+AGG | + | Chr5:99735255-99735274 | None:intergenic | 45.0% | |
GCATGGCAAACCATCATTTC+AGG | + | Chr5:99735124-99735143 | None:intergenic | 45.0% | |
GTCATGCCTGAGTTCATAAC+TGG | - | Chr5:99735367-99735386 | MsG0580029626.01.T01:CDS | 45.0% | |
GAAAGGTTCCAATGGAAGGG+TGG | - | Chr5:99735336-99735355 | MsG0580029626.01.T01:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 99734983 | 99735612 | 99734983 | ID=MsG0580029626.01;Name=MsG0580029626.01 |
Chr5 | mRNA | 99734983 | 99735612 | 99734983 | ID=MsG0580029626.01.T01;Parent=MsG0580029626.01;Name=MsG0580029626.01.T01;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|209 |
Chr5 | exon | 99734983 | 99735612 | 99734983 | ID=MsG0580029626.01.T01:exon:36276;Parent=MsG0580029626.01.T01 |
Chr5 | CDS | 99734983 | 99735612 | 99734983 | ID=MsG0580029626.01.T01:cds;Parent=MsG0580029626.01.T01 |
Chr5 | mRNA | 99734983 | 99735486 | 99734983 | ID=MsG0580029626.01.T02;Parent=MsG0580029626.01;Name=MsG0580029626.01.T02;_AED=0.10;_eAED=0.10;_QI=0|-1|0|1|-1|0|1|0|167 |
Chr5 | exon | 99734983 | 99735486 | 99734983 | ID=MsG0580029626.01.T02:exon:36277;Parent=MsG0580029626.01.T02 |
Chr5 | CDS | 99734983 | 99735486 | 99734983 | ID=MsG0580029626.01.T02:cds;Parent=MsG0580029626.01.T02 |
Gene Sequence |
Protein sequence |