AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018244.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018244.01.T01 MTR_4g008080 56.979 609 121 14 12 484 2 605 0.0 531
MsG0480018244.01.T01 MTR_2g009650 32.637 383 201 17 150 480 387 764 6.52e-34 136
MsG0480018244.01.T01 MTR_3g110650 30.383 339 176 13 150 478 368 656 3.93e-31 127
MsG0480018244.01.T01 MTR_4g093650 30.312 353 168 12 148 480 320 614 2.06e-24 107
MsG0480018244.01.T01 MTR_5g031720 46.154 78 41 1 401 477 513 590 9.82e-12 67.8
MsG0480018244.01.T01 MTR_6g012630 40.860 93 51 3 150 238 344 436 1.33e-11 67.0
MsG0480018244.01.T01 MTR_6g012630 40.860 93 51 3 150 238 344 436 1.36e-11 67.0
MsG0480018244.01.T01 MTR_6g012630 43.678 87 45 3 150 232 344 430 2.24e-11 66.2
MsG0480018244.01.T01 MTR_5g049770 45.333 75 40 1 401 474 164 238 6.83e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018244.01.T01 AT1G51580 41.765 340 145 12 146 480 328 619 4.83e-51 183
MsG0480018244.01.T01 AT5G64390 28.729 362 214 10 148 483 506 849 2.12e-30 125
MsG0480018244.01.T01 AT5G64390 29.006 362 222 10 148 483 506 858 4.73e-29 121
MsG0480018244.01.T01 AT5G64390 26.409 337 201 11 148 455 506 824 1.92e-17 85.9
MsG0480018244.01.T01 AT1G14170 50.000 84 38 3 151 230 300 383 2.17e-13 72.4
MsG0480018244.01.T01 AT1G14170 50.000 84 38 3 151 230 325 408 2.36e-13 72.4
MsG0480018244.01.T01 AT1G14170 50.000 84 38 3 151 230 292 375 2.41e-13 72.4
MsG0480018244.01.T01 AT5G15270 41.489 94 49 4 150 238 340 432 2.28e-12 69.7
MsG0480018244.01.T01 AT5G15270 41.489 94 49 4 150 238 340 432 2.76e-12 69.3
MsG0480018244.01.T01 AT5G15270 41.489 94 49 4 150 238 340 432 2.76e-12 69.3

Find 157 sgRNAs with CRISPR-Local

Find 347 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATTCCATACGTAAAATT+TGG 0.133028 4:+2117714 MsG0480018244.01.T01:three_prime_UTR
CTTTAAACTCGCCAGGTTAT+TGG 0.172226 4:+2116500 MsG0480018244.01.T01:intron
AGACCTGTCGAATTTGATTT+AGG 0.176691 4:-2117324 None:intergenic
CTTTACTGCGTTAAAATTTC+CGG 0.197707 4:-2115195 None:intergenic
AAGAACACTCCTCCAAATTT+TGG 0.205767 4:+2116593 MsG0480018244.01.T01:CDS
AAGTTAGAGATGTTTGTATT+AGG 0.209518 4:+2117613 MsG0480018244.01.T01:three_prime_UTR
ATCTCAACGGGTGAGTTATT+TGG 0.224083 4:-2117250 None:intergenic
GATGCTGTTCTTCGCGTTCA+TGG 0.236775 4:+2116166 MsG0480018244.01.T01:CDS
CAGGATAATGTAGGCAATTC+TGG 0.259911 4:+2115248 MsG0480018244.01.T01:CDS
CTGCGCAGCTTGCTTTGATT+AGG 0.263945 4:+2113739 MsG0480018244.01.T01:CDS
AGTTAGAGATGTTTGTATTA+GGG 0.266254 4:+2117614 MsG0480018244.01.T01:three_prime_UTR
CGCAGTTTCAAGCTGTCTTC+AGG 0.275558 4:+2115229 MsG0480018244.01.T01:CDS
TGCGCAGCTTGCTTTGATTA+GGG 0.276981 4:+2113740 MsG0480018244.01.T01:CDS
CCTTCTGTTGCCCCAGGTAT+TGG 0.285465 4:-2117453 None:intergenic
GGTGGTGGTGCACCAAAATT+TGG 0.287125 4:-2116605 None:intergenic
TTTAATTTGCCTTCAAGAAA+TGG 0.300723 4:+2117083 MsG0480018244.01.T01:CDS
GAAGGCAACATGTGATTTCT+TGG 0.305555 4:-2116670 None:intergenic
GCAGTTAACAGAGGAAATTC+AGG 0.318558 4:+2117044 MsG0480018244.01.T01:CDS
AGAAATCACATGTTGCCTTC+TGG 0.322189 4:+2116673 MsG0480018244.01.T01:CDS
ATTCCGTGATCTTGGAGAAT+TGG 0.332845 4:-2116887 None:intergenic
GACCTGTCGAATTTGATTTA+GGG 0.333482 4:-2117323 None:intergenic
TTTAAACTCGCCAGGTTATT+GGG 0.338536 4:+2116501 MsG0480018244.01.T01:intron
TGATTTCTTGGCCTGTATAA+AGG 0.342833 4:-2116658 None:intergenic
CTTCGAAAAGATACGTATAT+TGG 0.350240 4:-2116317 None:intergenic
GTAAGACCTTAAACTAAAAC+TGG 0.358101 4:-2117570 None:intergenic
TTTGGAGGAGTGTTCTTCAT+TGG 0.360122 4:-2116587 None:intergenic
GAAGGACTGGTGATTGTATC+TGG 0.363031 4:+2117471 MsG0480018244.01.T01:CDS
ACCTGAGGATTCCGTGATCT+TGG 0.368939 4:-2116895 None:intergenic
TAAAGGAGGAGGGGTGTCTC+TGG 0.370887 4:-2116641 None:intergenic
CATGGTCGACTTACAGAGAT+TGG 0.374787 4:+2116184 MsG0480018244.01.T01:CDS
CCTTCAAGAAATGGGACTCC+TGG 0.398880 4:+2117092 MsG0480018244.01.T01:CDS
TTAATTTGCCTTCAAGAAAT+GGG 0.402969 4:+2117084 MsG0480018244.01.T01:CDS
TTCCGTGATCTTGGAGAATT+GGG 0.403766 4:-2116886 None:intergenic
GCTGATGATCAACAGGCATT+GGG 0.405438 4:-2116789 None:intergenic
TTCACAGGTAGGGTGCCTCT+TGG 0.406897 4:+2116249 MsG0480018244.01.T01:CDS
TTGGAGGAGTGTTCTTCATT+GGG 0.416455 4:-2116586 None:intergenic
GTCTCTGGGAACGGTGGCAC+AGG 0.416596 4:-2116626 None:intergenic
AAGTCCTAAACTCACATTCC+AGG 0.417768 4:-2117110 None:intergenic
CCAGGAGTCCCATTTCTTGA+AGG 0.418557 4:-2117092 None:intergenic
TGAGGAGAATAATAAGAAAT+CGG 0.418591 4:+2113794 MsG0480018244.01.T01:CDS
TCTGCTCAGTGCCTAATTCA+AGG 0.418685 4:+2117513 MsG0480018244.01.T01:CDS
TGGGGAACCCGTTGAGGATA+AGG 0.419434 4:-2115305 None:intergenic
CATCCTCCTCCTCTTCCTCA+TGG 0.422045 4:+2116697 MsG0480018244.01.T01:CDS
GTTGTTCATGATCCAATACC+TGG 0.423763 4:+2117441 MsG0480018244.01.T01:CDS
CGCAGCGGATTCCTCGGCCG+CGG 0.429517 4:-2113721 None:intergenic
GGGAACGGTGGCACAGGTGG+TGG 0.430926 4:-2116620 None:intergenic
AGCATCTTGCACAGATTGTA+TGG 0.438066 4:-2116525 None:intergenic
TAAGGAACTCGATCCATGTT+TGG 0.439543 4:-2116844 None:intergenic
CCTTATCCTCGTGGTTATGA+AGG 0.446054 4:+2116862 MsG0480018244.01.T01:CDS
TTTCCTGATCCTCAGATCTC+TGG 0.447904 4:+2117408 MsG0480018244.01.T01:intron
TCACAGGTAGGGTGCCTCTT+GGG 0.455491 4:+2116250 MsG0480018244.01.T01:CDS
AGTGGAACCTTATCCTCAAC+GGG 0.463927 4:+2115298 MsG0480018244.01.T01:CDS
TTATGGTGTATGCAGATAAC+CGG 0.464073 4:+2115176 MsG0480018244.01.T01:intron
TATTATCTCCGCCGCGGCCG+AGG 0.465771 4:+2113710 MsG0480018244.01.T01:CDS
TAAACTAAAACTGGAGACTA+AGG 0.472976 4:-2117561 None:intergenic
ATCCTCCTCCTCTTCCTCAT+GGG 0.472985 4:+2116698 MsG0480018244.01.T01:CDS
CCTTCATAACCACGAGGATA+AGG 0.473558 4:-2116862 None:intergenic
ACATGGATTAAATACATATG+AGG 0.474239 4:-2117280 None:intergenic
AATGCATGCTGATGATCAAC+AGG 0.476221 4:-2116796 None:intergenic
AATAGTTTCTCGAATTCTGC+TGG 0.479181 4:-2116561 None:intergenic
GGGTGCCTCTTGGGCAAGGG+AGG 0.479406 4:+2116259 MsG0480018244.01.T01:CDS
AGAATGCGGAAAACGGTGTC+GGG 0.480032 4:-2113576 None:intergenic
TGAGGAGGTGGAGGAGGCAT+AGG 0.481079 4:-2116742 None:intergenic
AAGCTGCGCAGCGGATTCCT+CGG 0.485787 4:-2113727 None:intergenic
GGTAGGGTGCCTCTTGGGCA+AGG 0.487129 4:+2116255 MsG0480018244.01.T01:CDS
ACGGTGTCGGGTTGAGTTTG+AGG 0.487282 4:-2113564 None:intergenic
ATGTATTTAATCCATGTGTA+CGG 0.487300 4:+2117286 MsG0480018244.01.T01:CDS
TGTATTTAATCCATGTGTAC+GGG 0.491831 4:+2117287 MsG0480018244.01.T01:CDS
TAGAATCTTGACGCCGTCGC+CGG 0.494953 4:-2113637 None:intergenic
ATTCTAATTGACGACTTCGC+CGG 0.499747 4:+2113654 MsG0480018244.01.T01:CDS
ACACCCCTCCTCCTTTATAC+AGG 0.499868 4:+2116647 MsG0480018244.01.T01:CDS
TGCTGATGATCAACAGGCAT+TGG 0.500815 4:-2116790 None:intergenic
ATGCCTCCTCCACCTCCTCA+TGG 0.504717 4:+2116745 MsG0480018244.01.T01:CDS
TGAGGGATAGTGATCTCAAC+GGG 0.507713 4:-2117262 None:intergenic
TCACAATGAAGAAGTTGTAC+AGG 0.508659 4:+2116360 MsG0480018244.01.T01:CDS
AGCGGATTCCTCGGCCGCGG+CGG 0.514639 4:-2113718 None:intergenic
TCCTAGTGCGTTCACAGGTA+GGG 0.514641 4:+2116239 MsG0480018244.01.T01:CDS
AATAACAACGATGCGGTCAT+CGG 0.516311 4:-2113691 None:intergenic
TGGTCAATCCCATGAGGAAG+AGG 0.517517 4:-2116706 None:intergenic
CTACTCTCCCTCTCCGGCGA+CGG 0.518942 4:+2113624 MsG0480018244.01.T01:CDS
AAAGGAGGAGGGGTGTCTCT+GGG 0.519298 4:-2116640 None:intergenic
ATTCCATGAGGAGGTGGAGG+AGG 0.520089 4:-2116748 None:intergenic
TCTGGGAACGGTGGCACAGG+TGG 0.520685 4:-2116623 None:intergenic
TCCAAGATCACGGAATCCTC+AGG 0.521970 4:+2116894 MsG0480018244.01.T01:CDS
GGCACAGAGAATGCGGAAAA+CGG 0.522134 4:-2113583 None:intergenic
AGGAGGGGTGTCTCTGGGAA+CGG 0.522535 4:-2116635 None:intergenic
GGAGGCATAGGTGGACCAGC+TGG 0.525434 4:-2116730 None:intergenic
TCAGAAATGCGAAGAGTCAC+TGG 0.525968 4:+2116292 MsG0480018244.01.T01:CDS
CTTGGCCTGTATAAAGGAGG+AGG 0.526235 4:-2116652 None:intergenic
ATCCCATGAGGAAGAGGAGG+AGG 0.527750 4:-2116700 None:intergenic
ACCAGTCCTTCTGTTGCCCC+AGG 0.533747 4:-2117459 None:intergenic
GGGTCGCGGTCCGCCAAACA+TGG 0.539435 4:+2116831 MsG0480018244.01.T01:CDS
ACCTGGGGCAACAGAAGGAC+TGG 0.539702 4:+2117458 MsG0480018244.01.T01:CDS
ATCGTCTGGTGGTGCTCAAG+TGG 0.542414 4:+2115280 MsG0480018244.01.T01:CDS
GTAGGGTGCCTCTTGGGCAA+GGG 0.543380 4:+2116256 MsG0480018244.01.T01:CDS
CGAAGAACAGCATCTTGAGC+AGG 0.544227 4:-2116157 None:intergenic
GGAGAGGGAGAGTAGAGAAT+CGG 0.544945 4:-2113616 None:intergenic
ATAGTAATGCAGTTGTTGCT+AGG 0.546066 4:+2116215 MsG0480018244.01.T01:CDS
CATGGGATTGACCATCCAGC+TGG 0.555902 4:+2116715 MsG0480018244.01.T01:CDS
CATGACCTCCCTTGCCCAAG+AGG 0.557272 4:-2116264 None:intergenic
GGAGGTGGAGGAGGCATAGG+TGG 0.557581 4:-2116739 None:intergenic
TGGTCAATTCCATGAGGAGG+TGG 0.558814 4:-2116754 None:intergenic
CACCCTAAATCAAATTCGAC+AGG 0.561946 4:+2117321 MsG0480018244.01.T01:CDS
GATTCTCTACTCTCCCTCTC+CGG 0.562442 4:+2113618 MsG0480018244.01.T01:CDS
CTCCTAGTGCGTTCACAGGT+AGG 0.562959 4:+2116238 MsG0480018244.01.T01:CDS
CAGTTAACAGAGGAAATTCA+GGG 0.567193 4:+2117045 MsG0480018244.01.T01:CDS
TGTTGTTCTCCCCGTACACA+TGG 0.568809 4:-2117297 None:intergenic
CAGAGGAAATTCAGGGGCAA+CGG 0.569128 4:+2117052 MsG0480018244.01.T01:CDS
CTTGACGCCGTCGCCGGAGA+GGG 0.571429 4:-2113631 None:intergenic
TCAATTCCATGAGGAGGTGG+AGG 0.575095 4:-2116751 None:intergenic
GAGAATGCGGAAAACGGTGT+CGG 0.575988 4:-2113577 None:intergenic
CATGGATTAAATACATATGA+GGG 0.576895 4:-2117279 None:intergenic
CATGGAATTGACCATCCAGC+TGG 0.581422 4:+2116763 MsG0480018244.01.T01:CDS
CCAATACCTGGGGCAACAGA+AGG 0.582285 4:+2117453 MsG0480018244.01.T01:CDS
AGAGGAGGAGGATGTCCAGA+AGG 0.584420 4:-2116688 None:intergenic
ATCGGAGGAAGTGACATCTC+CGG 0.586977 4:-2113673 None:intergenic
AACAACGATGCGGTCATCGG+AGG 0.587188 4:-2113688 None:intergenic
TTGGCCTGTATAAAGGAGGA+GGG 0.587675 4:-2116651 None:intergenic
GGTGGAGAAGGATAATAATG+AGG 0.591100 4:+2113776 MsG0480018244.01.T01:CDS
GAGTAGAGAATCGGATTTAG+CGG 0.591992 4:-2113607 None:intergenic
TCTATGTTGAAGAACTGAGA+AGG 0.594358 4:+2117757 MsG0480018244.01.T01:three_prime_UTR
AGGGGTGTCTCTGGGAACGG+TGG 0.595203 4:-2116632 None:intergenic
ACCCTACCTGTGAACGCACT+AGG 0.598035 4:-2116240 None:intergenic
AAGTGGAACCTTATCCTCAA+CGG 0.598581 4:+2115297 MsG0480018244.01.T01:CDS
AGCTGTCTTCAGGATAATGT+AGG 0.599802 4:+2115239 MsG0480018244.01.T01:CDS
TCAGATCTCTGGTGCAAACG+TGG 0.604055 4:+2117419 MsG0480018244.01.T01:intron
CTGATGATCAACAGGCATTG+GGG 0.605876 4:-2116788 None:intergenic
GGTGGTGCACCAAAATTTGG+AGG 0.608523 4:-2116602 None:intergenic
GCATAGGTGGACCAGCTGGA+TGG 0.609702 4:-2116726 None:intergenic
GGAGGATGGGGAACCCGTTG+AGG 0.612562 4:-2115311 None:intergenic
GACCCAATTCTCCAAGATCA+CGG 0.614919 4:+2116884 MsG0480018244.01.T01:CDS
TCTTGACGCCGTCGCCGGAG+AGG 0.617793 4:-2113632 None:intergenic
TAGGCTCCTAGTGCGTTCAC+AGG 0.622463 4:+2116234 MsG0480018244.01.T01:CDS
TTGTTCATGATCCAATACCT+GGG 0.626338 4:+2117442 MsG0480018244.01.T01:CDS
GATCGAGTTCCTTATCCTCG+TGG 0.628485 4:+2116853 MsG0480018244.01.T01:CDS
GGAACTCGATCCATGTTTGG+CGG 0.629242 4:-2116841 None:intergenic
TAGCGGCGGCACAGAGAATG+CGG 0.630748 4:-2113590 None:intergenic
ATGAGGGATAGTGATCTCAA+CGG 0.640910 4:-2117263 None:intergenic
TCAATCCCATGAGGAAGAGG+AGG 0.644868 4:-2116703 None:intergenic
TTTCTTGGCCTGTATAAAGG+AGG 0.650882 4:-2116655 None:intergenic
GTGTTTCAGGCAGTTAACAG+AGG 0.651192 4:+2117035 MsG0480018244.01.T01:intron
TAAAAGTTCAATTCACACAA+TGG 0.652067 4:-2117645 None:intergenic
GGATGGTCAATTCCATGAGG+AGG 0.652254 4:-2116757 None:intergenic
TGATGATCAACAGGCATTGG+GGG 0.658278 4:-2116787 None:intergenic
AATCAAAGCAAGCTGCGCAG+CGG 0.661708 4:-2113736 None:intergenic
TTCAACATAGAAACTTACGA+TGG 0.671241 4:-2117745 None:intergenic
GTATTTAATCCATGTGTACG+GGG 0.672839 4:+2117288 MsG0480018244.01.T01:CDS
TGGCCTGTATAAAGGAGGAG+GGG 0.685963 4:-2116650 None:intergenic
GATAATGTAGGCAATTCTGG+TGG 0.689068 4:+2115251 MsG0480018244.01.T01:CDS
TGTTCATGATCCAATACCTG+GGG 0.694477 4:+2117443 MsG0480018244.01.T01:CDS
TAGAGAATCGGATTTAGCGG+CGG 0.700630 4:-2113604 None:intergenic
CGTTGTTATTATCTCCGCCG+CGG 0.716435 4:+2113704 MsG0480018244.01.T01:CDS
GCTGGATGGTCAATCCCATG+AGG 0.737900 4:-2116712 None:intergenic
CGGAGATAATAACAACGATG+CGG 0.740819 4:-2113698 None:intergenic
AGTTAACAGAGGAAATTCAG+GGG 0.741945 4:+2117046 MsG0480018244.01.T01:CDS
GCTGGATGGTCAATTCCATG+AGG 0.745901 4:-2116760 None:intergenic
TTGGGTCCTTCATAACCACG+AGG 0.814355 4:-2116868 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTTTGTAAAAAAAAAAAA+TGG + Chr4:2114779-2114798 MsG0480018244.01.T01:intron 10.0%
!! TATATAACATAATATTGAAT+TGG + Chr4:2114036-2114055 MsG0480018244.01.T01:intron 10.0%
!!! GATTTTATAATATTTTCTTT+TGG - Chr4:2116052-2116071 None:intergenic 10.0%
!! AAAAAATAAAACCTTGAATT+AGG - Chr4:2117527-2117546 None:intergenic 15.0%
!!! AACTTTAGAGATTTTTTTTA+AGG - Chr4:2117806-2117825 None:intergenic 15.0%
!!! AATGTATATGATATTTGTTA+AGG + Chr4:2116080-2116099 MsG0480018244.01.T01:intron 15.0%
!! AAAAAAATGGTATTACTAAG+AGG + Chr4:2114792-2114811 MsG0480018244.01.T01:intron 20.0%
!! ACATATCAACATAAAATATC+AGG - Chr4:2117195-2117214 None:intergenic 20.0%
!! ATTATCGATCAATTTCTTAT+CGG + Chr4:2117358-2117377 MsG0480018244.01.T01:intron 20.0%
!! TAATGAATTGGATAAGAATA+TGG + Chr4:2114401-2114420 MsG0480018244.01.T01:intron 20.0%
!! TAGAAAAGATGATATAAACT+CGG + Chr4:2114236-2114255 MsG0480018244.01.T01:intron 20.0%
!! TAGTTGATTAAATTGTTATG+TGG + Chr4:2116455-2116474 MsG0480018244.01.T01:intron 20.0%
!!! AGTATTTTATACAAGTTGTT+AGG + Chr4:2117146-2117165 MsG0480018244.01.T01:intron 20.0%
!!! ATTCAAGGTTTTATTTTTTG+CGG + Chr4:2117528-2117547 MsG0480018244.01.T01:CDS 20.0%
!!! TATATCATCTTTTCTACAAT+AGG - Chr4:2114232-2114251 None:intergenic 20.0%
! AAGTTAGAGATGTTTGTATT+AGG + Chr4:2117613-2117632 MsG0480018244.01.T01:three_prime_UTR 25.0%
! ACAAAATTTAGCAAAGTTAC+TGG - Chr4:2115680-2115699 None:intergenic 25.0%
! ACAACTTGTATAAAATACTG+TGG - Chr4:2117145-2117164 None:intergenic 25.0%
! AGAATAATAAGAAATCGGTT+GGG + Chr4:2113799-2113818 MsG0480018244.01.T01:intron 25.0%
! AGATCTAGAGATTAATGAAT+TGG + Chr4:2114389-2114408 MsG0480018244.01.T01:intron 25.0%
! AGTTAGAGATGTTTGTATTA+GGG + Chr4:2117614-2117633 MsG0480018244.01.T01:three_prime_UTR 25.0%
! ATCATTCCATACGTAAAATT+TGG + Chr4:2117714-2117733 MsG0480018244.01.T01:three_prime_UTR 25.0%
! ATGTATTTAATCCATGTGTA+CGG + Chr4:2117286-2117305 MsG0480018244.01.T01:CDS 25.0%
! GGTAAGATATTGAAAAGATT+AGG + Chr4:2113873-2113892 MsG0480018244.01.T01:intron 25.0%
! TAAAAGTTCAATTCACACAA+TGG - Chr4:2117648-2117667 None:intergenic 25.0%
! TGAGGAGAATAATAAGAAAT+CGG + Chr4:2113794-2113813 MsG0480018244.01.T01:CDS 25.0%
! TGATATAAGTCAAAACTTGA+TGG + Chr4:2116432-2116451 MsG0480018244.01.T01:intron 25.0%
! TTTGCAATGTTAACTGTATA+CGG + Chr4:2116401-2116420 MsG0480018244.01.T01:intron 25.0%
!! ACATGGATTAAATACATATG+AGG - Chr4:2117283-2117302 None:intergenic 25.0%
!! AGTTTCTCTTACAATTTTCT+AGG - Chr4:2114361-2114380 None:intergenic 25.0%
!! CATGGATTAAATACATATGA+GGG - Chr4:2117282-2117301 None:intergenic 25.0%
!! TATCATCCAAATTTTACGTA+TGG - Chr4:2117723-2117742 None:intergenic 25.0%
!! TTCTTTTGTCATAATCAAAC+AGG + Chr4:2115877-2115896 MsG0480018244.01.T01:intron 25.0%
!!! ATAAAGTTGGTAGTCTTATT+GGG + Chr4:2115443-2115462 MsG0480018244.01.T01:intron 25.0%
!!! TGAGAGCATTAAGAAAAATT+TGG + Chr4:2114974-2114993 MsG0480018244.01.T01:intron 25.0%
!!! TTAATTTGCCTTCAAGAAAT+GGG + Chr4:2117084-2117103 MsG0480018244.01.T01:CDS 25.0%
!!! TTTAATTTGCCTTCAAGAAA+TGG + Chr4:2117083-2117102 MsG0480018244.01.T01:CDS 25.0%
AAAATTTGGAGGTGATAGTT+TGG + Chr4:2114988-2115007 MsG0480018244.01.T01:intron 30.0%
AAGAGTAAACAATCTGATGA+TGG - Chr4:2115933-2115952 None:intergenic 30.0%
AATACTAGACAAGATAGGAT+TGG + Chr4:2114540-2114559 MsG0480018244.01.T01:intron 30.0%
AATGACAACATTAGAGAGTT+AGG + Chr4:2114200-2114219 MsG0480018244.01.T01:intron 30.0%
AATTAACAGCTGTAGGATAT+TGG - Chr4:2114068-2114087 None:intergenic 30.0%
ACATTGTGTTTAGAAATGTG+TGG + Chr4:2115757-2115776 MsG0480018244.01.T01:intron 30.0%
ATACTAGACAAGATAGGATT+GGG + Chr4:2114541-2114560 MsG0480018244.01.T01:intron 30.0%
ATGACAACATTAGAGAGTTA+GGG + Chr4:2114201-2114220 MsG0480018244.01.T01:intron 30.0%
CTGTTGAGTTATTCTAATCA+TGG + Chr4:2115960-2115979 MsG0480018244.01.T01:intron 30.0%
CTTCGAAAAGATACGTATAT+TGG - Chr4:2116320-2116339 None:intergenic 30.0%
CTTTACTGCGTTAAAATTTC+CGG - Chr4:2115198-2115217 None:intergenic 30.0%
GAAACTTATGTTGAGGTTTA+TGG + Chr4:2115159-2115178 MsG0480018244.01.T01:intron 30.0%
GAGAAAATACTAGACAAGAT+AGG + Chr4:2114535-2114554 MsG0480018244.01.T01:intron 30.0%
GAGAATAATAAGAAATCGGT+TGG + Chr4:2113798-2113817 MsG0480018244.01.T01:intron 30.0%
GAGCATTAAGAAAAATTTGG+AGG + Chr4:2114977-2114996 MsG0480018244.01.T01:intron 30.0%
GTAAGACCTTAAACTAAAAC+TGG - Chr4:2117573-2117592 None:intergenic 30.0%
TAAACTAAAACTGGAGACTA+AGG - Chr4:2117564-2117583 None:intergenic 30.0%
TGTATTTAATCCATGTGTAC+GGG + Chr4:2117287-2117306 MsG0480018244.01.T01:CDS 30.0%
TGTCAATTCTGTAGTAAAGA+GGG + Chr4:2114889-2114908 MsG0480018244.01.T01:intron 30.0%
TTCAACATAGAAACTTACGA+TGG - Chr4:2117748-2117767 None:intergenic 30.0%
TTGTCAATTCTGTAGTAAAG+AGG + Chr4:2114888-2114907 MsG0480018244.01.T01:intron 30.0%
! CAATATACGTATCTTTTCGA+AGG + Chr4:2116318-2116337 MsG0480018244.01.T01:CDS 30.0%
! GATTTGGTTGTTGTTGTAAT+TGG + Chr4:2115084-2115103 MsG0480018244.01.T01:intron 30.0%
! GTTGTTGTTGTAAATTGTAG+TGG + Chr4:2115106-2115125 MsG0480018244.01.T01:intron 30.0%
! TCTATACAAATAGTTGATGC+TGG + Chr4:2115511-2115530 MsG0480018244.01.T01:intron 30.0%
! TTAGTTATTGCTGTGTTGAT+GGG + Chr4:2114481-2114500 MsG0480018244.01.T01:intron 30.0%
!! GATAAAGTTGGTAGTCTTAT+TGG + Chr4:2115442-2115461 MsG0480018244.01.T01:intron 30.0%
!! TTGATATGTCTGTTATTTCC+AGG + Chr4:2117206-2117225 MsG0480018244.01.T01:intron 30.0%
!!! TAGTCTCCAGTTTTAGTTTA+AGG + Chr4:2117564-2117583 MsG0480018244.01.T01:exon 30.0%
AATAGTTTCTCGAATTCTGC+TGG - Chr4:2116564-2116583 None:intergenic 35.0%
AGAACATGTTTCAACCCTTT+AGG + Chr4:2117009-2117028 MsG0480018244.01.T01:intron 35.0%
AGATGATATAAACTCGGCTT+AGG + Chr4:2114242-2114261 MsG0480018244.01.T01:intron 35.0%
AGCACCTATTGTAGAAAAGA+GGG + Chr4:2114594-2114613 MsG0480018244.01.T01:intron 35.0%
AGTCCAGTTGCTAAAGATAT+GGG + Chr4:2114930-2114949 MsG0480018244.01.T01:intron 35.0%
AGTTAACAGAGGAAATTCAG+GGG + Chr4:2117046-2117065 MsG0480018244.01.T01:CDS 35.0%
ATAAAAGTAAAGCTGACCTG+AGG - Chr4:2116913-2116932 None:intergenic 35.0%
ATAGTAATGCAGTTGTTGCT+AGG + Chr4:2116215-2116234 MsG0480018244.01.T01:CDS 35.0%
ATTTAGCCAACACAACTTAG+TGG + Chr4:2115056-2115075 MsG0480018244.01.T01:intron 35.0%
CAAGAATGTTGCTGAATTAG+TGG + Chr4:2114723-2114742 MsG0480018244.01.T01:intron 35.0%
CAGTTAACAGAGGAAATTCA+GGG + Chr4:2117045-2117064 MsG0480018244.01.T01:CDS 35.0%
CATTGAGATTATTCTCGTGT+TGG - Chr4:2114694-2114713 None:intergenic 35.0%
CCTTATCCTATGTACAAGTA+CGG - Chr4:2115636-2115655 None:intergenic 35.0%
CTCTGGCGTTAAATTATTCT+GGG + Chr4:2115822-2115841 MsG0480018244.01.T01:intron 35.0%
CTCTTTACTACGAAATCTAC+AGG - Chr4:2114292-2114311 None:intergenic 35.0%
CTTAGTTATTGCTGTGTTGA+TGG + Chr4:2114480-2114499 MsG0480018244.01.T01:intron 35.0%
GAAAAGATTAGGCAAGAAAG+TGG + Chr4:2113884-2113903 MsG0480018244.01.T01:intron 35.0%
GATTTCGTAGTAAAGAGAGT+AGG + Chr4:2114295-2114314 MsG0480018244.01.T01:intron 35.0%
GGAATAGGAGAATGATCTTT+AGG - Chr4:2113929-2113948 None:intergenic 35.0%
GTAAAGAGGGTAGATTAGAT+TGG + Chr4:2114902-2114921 MsG0480018244.01.T01:intron 35.0%
GTATTTAATCCATGTGTACG+GGG + Chr4:2117288-2117307 MsG0480018244.01.T01:CDS 35.0%
TAGCACCTATTGTAGAAAAG+AGG + Chr4:2114593-2114612 MsG0480018244.01.T01:intron 35.0%
TATTGTTTGATCTGAGCCAT+GGG + Chr4:2115137-2115156 MsG0480018244.01.T01:intron 35.0%
TCACAATGAAGAAGTTGTAC+AGG + Chr4:2116360-2116379 MsG0480018244.01.T01:CDS 35.0%
TCATAGAATGTTTGTGGAAG+AGG + Chr4:2115390-2115409 MsG0480018244.01.T01:intron 35.0%
TCGATAGCGTTAAATTGTTC+TGG + Chr4:2115727-2115746 MsG0480018244.01.T01:intron 35.0%
TCTATGTTGAAGAACTGAGA+AGG + Chr4:2117757-2117776 MsG0480018244.01.T01:three_prime_UTR 35.0%
TCTCTGGCGTTAAATTATTC+TGG + Chr4:2115821-2115840 MsG0480018244.01.T01:intron 35.0%
TGATTTCTTGGCCTGTATAA+AGG - Chr4:2116661-2116680 None:intergenic 35.0%
TGGGAATGATATTAGTGAGA+GGG + Chr4:2114560-2114579 MsG0480018244.01.T01:intron 35.0%
TTAGCACCTAGTTATCAAGT+TGG + Chr4:2113831-2113850 MsG0480018244.01.T01:intron 35.0%
TTATGGTGTATGCAGATAAC+CGG + Chr4:2115176-2115195 MsG0480018244.01.T01:intron 35.0%
TTGGGAATGATATTAGTGAG+AGG + Chr4:2114559-2114578 MsG0480018244.01.T01:intron 35.0%
TTGTCTCCAAGAAAAATGCT+TGG - Chr4:2116947-2116966 None:intergenic 35.0%
TTGTGTCAGCAAGATAAAGT+TGG + Chr4:2115430-2115449 MsG0480018244.01.T01:intron 35.0%
TTGTTCATGATCCAATACCT+GGG + Chr4:2117442-2117461 MsG0480018244.01.T01:CDS 35.0%
TTTAAACTCGCCAGGTTATT+GGG + Chr4:2116501-2116520 MsG0480018244.01.T01:intron 35.0%
! AAGAACACTCCTCCAAATTT+TGG + Chr4:2116593-2116612 MsG0480018244.01.T01:CDS 35.0%
! ACACAACCAACTTGATAACT+AGG - Chr4:2113840-2113859 None:intergenic 35.0%
! AGACCTGTCGAATTTGATTT+AGG - Chr4:2117327-2117346 None:intergenic 35.0%
! AGTCAAATCACTAGAGGTAT+AGG + Chr4:2114331-2114350 MsG0480018244.01.T01:intron 35.0%
! AGTTTTCATTACGAGCATGT+TGG + Chr4:2116001-2116020 MsG0480018244.01.T01:intron 35.0%
! ATGTGTTGTTAGACTAGACA+TGG + Chr4:2114167-2114186 MsG0480018244.01.T01:intron 35.0%
! CAACGTTTGTCTGATTTTTG+TGG + Chr4:2115900-2115919 MsG0480018244.01.T01:intron 35.0%
! CAGAGGTTATTCTTCTTTTC+GGG + Chr4:2115346-2115365 MsG0480018244.01.T01:intron 35.0%
! CATAGTCCAAGCATTTTTCT+TGG + Chr4:2116938-2116957 MsG0480018244.01.T01:intron 35.0%
! CATGCATTTTCACATGGTAT+GGG + Chr4:2116811-2116830 MsG0480018244.01.T01:CDS 35.0%
! CCAGAGGTTATTCTTCTTTT+CGG + Chr4:2115345-2115364 MsG0480018244.01.T01:intron 35.0%
! GACCTGTCGAATTTGATTTA+GGG - Chr4:2117326-2117345 None:intergenic 35.0%
! GGATATCATTTTGCATGAAG+AGG + Chr4:2115654-2115673 MsG0480018244.01.T01:intron 35.0%
! TGAACCCTCTTTTCTACAAT+AGG - Chr4:2114601-2114620 None:intergenic 35.0%
! TTGTTGATACCATTGATAGC+TGG + Chr4:2115797-2115816 MsG0480018244.01.T01:intron 35.0%
! TTTGTCTGATTTTTGTGGCT+GGG + Chr4:2115905-2115924 MsG0480018244.01.T01:intron 35.0%
!! CAACTTAGTGGACTAAGATT+TGG + Chr4:2115068-2115087 MsG0480018244.01.T01:intron 35.0%
!! GATTAGGGTTTTTGAGAGAA+TGG + Chr4:2113755-2113774 MsG0480018244.01.T01:CDS 35.0%
!! TATTTTGCTTTAAACTCGCC+AGG + Chr4:2116493-2116512 MsG0480018244.01.T01:intron 35.0%
AAGTCCTAAACTCACATTCC+AGG - Chr4:2117113-2117132 None:intergenic 40.0%
AAGTGGAACCTTATCCTCAA+CGG + Chr4:2115297-2115316 MsG0480018244.01.T01:CDS 40.0%
AATAACAACGATGCGGTCAT+CGG - Chr4:2113694-2113713 None:intergenic 40.0%
AATGCATGCTGATGATCAAC+AGG - Chr4:2116799-2116818 None:intergenic 40.0%
ACCTCAACATAAGTTTCCCA+TGG - Chr4:2115156-2115175 None:intergenic 40.0%
ACCTGCTCATAGAATGTTTG+TGG + Chr4:2115384-2115403 MsG0480018244.01.T01:intron 40.0%
ACTTGCGAATTAACAGCTGT+AGG - Chr4:2114075-2114094 None:intergenic 40.0%
AGAAATCACATGTTGCCTTC+TGG + Chr4:2116673-2116692 MsG0480018244.01.T01:CDS 40.0%
AGCATCTTGCACAGATTGTA+TGG - Chr4:2116528-2116547 None:intergenic 40.0%
AGCCAAAATTGATCCCTCTT+TGG + Chr4:2114650-2114669 MsG0480018244.01.T01:intron 40.0%
AGCTGTCTTCAGGATAATGT+AGG + Chr4:2115239-2115258 MsG0480018244.01.T01:CDS 40.0%
ATATTAGTGAGAGGGAGAGT+TGG + Chr4:2114568-2114587 MsG0480018244.01.T01:intron 40.0%
ATCTCAACGGGTGAGTTATT+TGG - Chr4:2117253-2117272 None:intergenic 40.0%
ATGAGGGATAGTGATCTCAA+CGG - Chr4:2117266-2117285 None:intergenic 40.0%
ATTCCGTGATCTTGGAGAAT+TGG - Chr4:2116890-2116909 None:intergenic 40.0%
ATTCTAATTGACGACTTCGC+CGG + Chr4:2113654-2113673 MsG0480018244.01.T01:CDS 40.0%
ATTGTATGGTCCCAATAACC+TGG - Chr4:2116514-2116533 None:intergenic 40.0%
CACCCTAAATCAAATTCGAC+AGG + Chr4:2117321-2117340 MsG0480018244.01.T01:CDS 40.0%
CAGAGATGAGAATGTTGCAT+TGG + Chr4:2114144-2114163 MsG0480018244.01.T01:intron 40.0%
CAGGATAATGTAGGCAATTC+TGG + Chr4:2115248-2115267 MsG0480018244.01.T01:CDS 40.0%
CAGTCCAGTTGCTAAAGATA+TGG + Chr4:2114929-2114948 MsG0480018244.01.T01:intron 40.0%
CAGTTGCTAAAGATATGGGA+AGG + Chr4:2114934-2114953 MsG0480018244.01.T01:intron 40.0%
CCGAAAAGAAGAATAACCTC+TGG - Chr4:2115348-2115367 None:intergenic 40.0%
CCGTACTTGTACATAGGATA+AGG + Chr4:2115633-2115652 MsG0480018244.01.T01:intron 40.0%
CCTATGTACAAGTACGGTTA+AGG - Chr4:2115630-2115649 None:intergenic 40.0%
CCTTAACCGTACTTGTACAT+AGG + Chr4:2115627-2115646 MsG0480018244.01.T01:intron 40.0%
CGGAGATAATAACAACGATG+CGG - Chr4:2113701-2113720 None:intergenic 40.0%
CTATTGTTTGATCTGAGCCA+TGG + Chr4:2115136-2115155 MsG0480018244.01.T01:intron 40.0%
CTTAGTCCACTAAGTTGTGT+TGG - Chr4:2115065-2115084 None:intergenic 40.0%
CTTCCCATATCTTTAGCAAC+TGG - Chr4:2114936-2114955 None:intergenic 40.0%
CTTTAAACTCGCCAGGTTAT+TGG + Chr4:2116500-2116519 MsG0480018244.01.T01:intron 40.0%
CTTTACCTTATCCCACAAAG+TGG - Chr4:2114460-2114479 None:intergenic 40.0%
GAAGGCAACATGTGATTTCT+TGG - Chr4:2116673-2116692 None:intergenic 40.0%
GAGTAGAGAATCGGATTTAG+CGG - Chr4:2113610-2113629 None:intergenic 40.0%
GAGTGTAGTCAAATCACTAG+AGG + Chr4:2114325-2114344 MsG0480018244.01.T01:intron 40.0%
GATAATGTAGGCAATTCTGG+TGG + Chr4:2115251-2115270 MsG0480018244.01.T01:CDS 40.0%
GCAGTTAACAGAGGAAATTC+AGG + Chr4:2117044-2117063 MsG0480018244.01.T01:CDS 40.0%
GCCTGAAACACAAACCTAAA+GGG - Chr4:2117026-2117045 None:intergenic 40.0%
GGTGGAGAAGGATAATAATG+AGG + Chr4:2113776-2113795 MsG0480018244.01.T01:CDS 40.0%
GTTGTTCATGATCCAATACC+TGG + Chr4:2117441-2117460 MsG0480018244.01.T01:CDS 40.0%
TAAGGAACTCGATCCATGTT+TGG - Chr4:2116847-2116866 None:intergenic 40.0%
TCCACAAACATTCTATGAGC+AGG - Chr4:2115388-2115407 None:intergenic 40.0%
TGATATAAACTCGGCTTAGG+TGG + Chr4:2114245-2114264 MsG0480018244.01.T01:intron 40.0%
TGCCTGAAACACAAACCTAA+AGG - Chr4:2117027-2117046 None:intergenic 40.0%
TGTTCATGATCCAATACCTG+GGG + Chr4:2117443-2117462 MsG0480018244.01.T01:CDS 40.0%
TGTTGTTAGACTAGACATGG+TGG + Chr4:2114170-2114189 MsG0480018244.01.T01:intron 40.0%
TTCCGTGATCTTGGAGAATT+GGG - Chr4:2116889-2116908 None:intergenic 40.0%
TTTCTTGGCCTGTATAAAGG+AGG - Chr4:2116658-2116677 None:intergenic 40.0%
! AAGCTTTGACTTAGGTGGTT+TGG + Chr4:2114848-2114867 MsG0480018244.01.T01:intron 40.0%
! ACATGTTCTTGAAAGCACGA+AGG - Chr4:2116998-2117017 None:intergenic 40.0%
! ACCCTTTAGGTTTGTGTTTC+AGG + Chr4:2117022-2117041 MsG0480018244.01.T01:intron 40.0%
! AGAGTGCTAAGCTTTGACTT+AGG + Chr4:2114840-2114859 MsG0480018244.01.T01:intron 40.0%
! AGCCAAAGAGGGATCAATTT+TGG - Chr4:2114655-2114674 None:intergenic 40.0%
! AGCTTTGACTTAGGTGGTTT+GGG + Chr4:2114849-2114868 MsG0480018244.01.T01:intron 40.0%
! CATCAGCATGCATTTTCACA+TGG + Chr4:2116805-2116824 MsG0480018244.01.T01:CDS 40.0%
! CATGTTCTTGAAAGCACGAA+GGG - Chr4:2116997-2117016 None:intergenic 40.0%
! GCATGCATTTTCACATGGTA+TGG + Chr4:2116810-2116829 MsG0480018244.01.T01:CDS 40.0%
! GTTTGTCTGATTTTTGTGGC+TGG + Chr4:2115904-2115923 MsG0480018244.01.T01:intron 40.0%
! TTAGCACTCTTTTCTACCAC+AGG - Chr4:2114830-2114849 None:intergenic 40.0%
! TTATTGCTGTGTTGATGGGA+TGG + Chr4:2114485-2114504 MsG0480018244.01.T01:intron 40.0%
! TTGTCTGATTTTTGTGGCTG+GGG + Chr4:2115906-2115925 MsG0480018244.01.T01:intron 40.0%
!! ATGTCTGTTATTTCCAGGAC+TGG + Chr4:2117211-2117230 MsG0480018244.01.T01:intron 40.0%
!! GTTGGTAGTCTTATTGGGAA+AGG + Chr4:2115448-2115467 MsG0480018244.01.T01:intron 40.0%
!! TAACCTCTGGAATGATGATC+AGG - Chr4:2115335-2115354 None:intergenic 40.0%
!! TAGGGTTTTTGAGAGAATGG+TGG + Chr4:2113758-2113777 MsG0480018244.01.T01:CDS 40.0%
!! TATCAAGTTGGTTGTGTGCT+TGG + Chr4:2113843-2113862 MsG0480018244.01.T01:intron 40.0%
!! TTGGAGGAGTGTTCTTCATT+GGG - Chr4:2116589-2116608 None:intergenic 40.0%
!! TTTGGAGGAGTGTTCTTCAT+TGG - Chr4:2116590-2116609 None:intergenic 40.0%
!! TTTTGAGAGAATGGTGGAGA+AGG + Chr4:2113764-2113783 MsG0480018244.01.T01:CDS 40.0%
!!! TCTGGTGGTTTTAAATCGTC+TGG + Chr4:2115266-2115285 MsG0480018244.01.T01:CDS 40.0%
AAACTCGGCTTAGGTGGTTT+AGG + Chr4:2114251-2114270 MsG0480018244.01.T01:intron 45.0%
AAGAAAGTGGTGCTCAGGTT+AGG + Chr4:2113897-2113916 MsG0480018244.01.T01:intron 45.0%
ACCTGAATAAACTCGTCACC+AGG - Chr4:2113956-2113975 None:intergenic 45.0%
AGTGGAACCTTATCCTCAAC+GGG + Chr4:2115298-2115317 MsG0480018244.01.T01:CDS 45.0%
CCTTATCCTCGTGGTTATGA+AGG + Chr4:2116862-2116881 MsG0480018244.01.T01:CDS 45.0%
CCTTCATAACCACGAGGATA+AGG - Chr4:2116865-2116884 None:intergenic 45.0%
CGGGCTTTACAAAACGAAAC+TGG + Chr4:2115484-2115503 MsG0480018244.01.T01:intron 45.0%
CTGTAATGAGTTTCCAGTCC+TGG - Chr4:2117227-2117246 None:intergenic 45.0%
CTTATCCCACAAAGTGGAGT+CGG - Chr4:2114454-2114473 None:intergenic 45.0%
GAATGATGATCAGGAGGATG+GGG - Chr4:2115326-2115345 None:intergenic 45.0%
GACCCAATTCTCCAAGATCA+CGG + Chr4:2116884-2116903 MsG0480018244.01.T01:CDS 45.0%
GACTCCTGGAATGTGAGTTT+AGG + Chr4:2117106-2117125 MsG0480018244.01.T01:intron 45.0%
GCCATGGGAAACTTATGTTG+AGG + Chr4:2115152-2115171 MsG0480018244.01.T01:intron 45.0%
GCTGATGATCAACAGGCATT+GGG - Chr4:2116792-2116811 None:intergenic 45.0%
GGAATGATGATCAGGAGGAT+GGG - Chr4:2115327-2115346 None:intergenic 45.0%
GGTTTAGGCATGTAGAGAGA+AGG + Chr4:2114266-2114285 MsG0480018244.01.T01:intron 45.0%
GTGTTTCAGGCAGTTAACAG+AGG + Chr4:2117035-2117054 MsG0480018244.01.T01:intron 45.0%
TAGAGAATCGGATTTAGCGG+CGG - Chr4:2113607-2113626 None:intergenic 45.0%
TCAGAAATGCGAAGAGTCAC+TGG + Chr4:2116292-2116311 MsG0480018244.01.T01:CDS 45.0%
TCTGCTCAGTGCCTAATTCA+AGG + Chr4:2117513-2117532 MsG0480018244.01.T01:CDS 45.0%
TGAATAAACTCGTCACCAGG+AGG - Chr4:2113953-2113972 None:intergenic 45.0%
TGAGGGATAGTGATCTCAAC+GGG - Chr4:2117265-2117284 None:intergenic 45.0%
TGCTGATGATCAACAGGCAT+TGG - Chr4:2116793-2116812 None:intergenic 45.0%
TGGAATGATGATCAGGAGGA+TGG - Chr4:2115328-2115347 None:intergenic 45.0%
TTGGCCTGTATAAAGGAGGA+GGG - Chr4:2116654-2116673 None:intergenic 45.0%
TTTCCTGATCCTCAGATCTC+TGG + Chr4:2117408-2117427 MsG0480018244.01.T01:intron 45.0%
! ACTTAGGTGGTTTGGGCATA+TGG + Chr4:2114856-2114875 MsG0480018244.01.T01:intron 45.0%
! CATGGTCGACTTACAGAGAT+TGG + Chr4:2116184-2116203 MsG0480018244.01.T01:CDS 45.0%
! CTGATGATCAACAGGCATTG+GGG - Chr4:2116791-2116810 None:intergenic 45.0%
! CTTAGGTGGTTTGGGCATAT+GGG + Chr4:2114857-2114876 MsG0480018244.01.T01:intron 45.0%
! GAAGGACTGGTGATTGTATC+TGG + Chr4:2117471-2117490 MsG0480018244.01.T01:CDS 45.0%
! GATCCCTCTTTGGCTTAGAT+GGG + Chr4:2114660-2114679 MsG0480018244.01.T01:intron 45.0%
! GTGCTAAGCTTTGACTTAGG+TGG + Chr4:2114843-2114862 MsG0480018244.01.T01:intron 45.0%
! TATTGGGAAAGGTGGTTCTG+TGG + Chr4:2115459-2115478 MsG0480018244.01.T01:intron 45.0%
! TCCTGGTGACGAGTTTATTC+AGG + Chr4:2113952-2113971 MsG0480018244.01.T01:intron 45.0%
! TGATCCCTCTTTGGCTTAGA+TGG + Chr4:2114659-2114678 MsG0480018244.01.T01:intron 45.0%
! TGCGCAGCTTGCTTTGATTA+GGG + Chr4:2113740-2113759 MsG0480018244.01.T01:CDS 45.0%
! TTAGGTGGTTTGGGCATATG+GGG + Chr4:2114858-2114877 MsG0480018244.01.T01:intron 45.0%
! TTTTCACATGGTATGGGTCG+CGG + Chr4:2116817-2116836 MsG0480018244.01.T01:CDS 45.0%
!! GGTAGTCTTATTGGGAAAGG+TGG + Chr4:2115451-2115470 MsG0480018244.01.T01:intron 45.0%
!! TGATGATCAACAGGCATTGG+GGG - Chr4:2116790-2116809 None:intergenic 45.0%
!!! GGTGGTTTTAAATCGTCTGG+TGG + Chr4:2115269-2115288 MsG0480018244.01.T01:CDS 45.0%
AATCAAAGCAAGCTGCGCAG+CGG - Chr4:2113739-2113758 None:intergenic 50.0%
ACAAAGTGGAGTCGGCTACA+TGG - Chr4:2114446-2114465 None:intergenic 50.0%
ACACCCCTCCTCCTTTATAC+AGG + Chr4:2116647-2116666 MsG0480018244.01.T01:CDS 50.0%
ACCTGAGGATTCCGTGATCT+TGG - Chr4:2116898-2116917 None:intergenic 50.0%
ACGAGCATGTTGGCATCTGT+TGG + Chr4:2116011-2116030 MsG0480018244.01.T01:intron 50.0%
ACGTTTGCACCAGAGATCTG+AGG - Chr4:2117420-2117439 None:intergenic 50.0%
ACTGCCCATCTAAGCCAAAG+AGG - Chr4:2114667-2114686 None:intergenic 50.0%
AGAATGCGGAAAACGGTGTC+GGG - Chr4:2113579-2113598 None:intergenic 50.0%
ATAAACTCGTCACCAGGAGG+AGG - Chr4:2113950-2113969 None:intergenic 50.0%
ATCCTCCTCCTCTTCCTCAT+GGG + Chr4:2116698-2116717 MsG0480018244.01.T01:CDS 50.0%
ATCGGAGGAAGTGACATCTC+CGG - Chr4:2113676-2113695 None:intergenic 50.0%
CAGAGGAAATTCAGGGGCAA+CGG + Chr4:2117052-2117071 MsG0480018244.01.T01:CDS 50.0%
CATGGAATTGACCATCCAGC+TGG + Chr4:2116763-2116782 MsG0480018244.01.T01:CDS 50.0%
CATTCTCCTATTCCTCCTCC+TGG + Chr4:2113935-2113954 MsG0480018244.01.T01:intron 50.0%
CCAGGAGTCCCATTTCTTGA+AGG - Chr4:2117095-2117114 None:intergenic 50.0%
CCTCCTGATCATCATTCCAG+AGG + Chr4:2115329-2115348 MsG0480018244.01.T01:intron 50.0%
CCTTCAAGAAATGGGACTCC+TGG + Chr4:2117092-2117111 MsG0480018244.01.T01:CDS 50.0%
CGAAGAACAGCATCTTGAGC+AGG - Chr4:2116160-2116179 None:intergenic 50.0%
CGACTCCACTTTGTGGGATA+AGG + Chr4:2114452-2114471 MsG0480018244.01.T01:intron 50.0%
CGAGCATGTTGGCATCTGTT+GGG + Chr4:2116012-2116031 MsG0480018244.01.T01:intron 50.0%
CGCAGTTTCAAGCTGTCTTC+AGG + Chr4:2115229-2115248 MsG0480018244.01.T01:CDS 50.0%
CTGCCCATCTAAGCCAAAGA+GGG - Chr4:2114666-2114685 None:intergenic 50.0%
CTTGGCCTGTATAAAGGAGG+AGG - Chr4:2116655-2116674 None:intergenic 50.0%
GACCACACGCTCATCTGAAT+CGG - Chr4:2115538-2115557 None:intergenic 50.0%
GAGAATGCGGAAAACGGTGT+CGG - Chr4:2113580-2113599 None:intergenic 50.0%
GATCGAGTTCCTTATCCTCG+TGG + Chr4:2116853-2116872 MsG0480018244.01.T01:CDS 50.0%
GATGCTGTTCTTCGCGTTCA+TGG + Chr4:2116166-2116185 MsG0480018244.01.T01:CDS 50.0%
GATTCTCTACTCTCCCTCTC+CGG + Chr4:2113618-2113637 MsG0480018244.01.T01:CDS 50.0%
GCTGGATGGTCAATTCCATG+AGG - Chr4:2116763-2116782 None:intergenic 50.0%
GGAACTCGATCCATGTTTGG+CGG - Chr4:2116844-2116863 None:intergenic 50.0%
GGAGAGGGAGAGTAGAGAAT+CGG - Chr4:2113619-2113638 None:intergenic 50.0%
GGATGGTCAATTCCATGAGG+AGG - Chr4:2116760-2116779 None:intergenic 50.0%
GGCACAGAGAATGCGGAAAA+CGG - Chr4:2113586-2113605 None:intergenic 50.0%
GGTGGTGCACCAAAATTTGG+AGG - Chr4:2116605-2116624 None:intergenic 50.0%
GTTGGTTGTGTGCTTGGTAG+AGG + Chr4:2113849-2113868 MsG0480018244.01.T01:intron 50.0%
TAGGCAAGAAAGTGGTGCTC+AGG + Chr4:2113892-2113911 MsG0480018244.01.T01:intron 50.0%
TCAATCCCATGAGGAAGAGG+AGG - Chr4:2116706-2116725 None:intergenic 50.0%
TCAATTCCATGAGGAGGTGG+AGG - Chr4:2116754-2116773 None:intergenic 50.0%
TCAGATCTCTGGTGCAAACG+TGG + Chr4:2117419-2117438 MsG0480018244.01.T01:intron 50.0%
TCCAAGATCACGGAATCCTC+AGG + Chr4:2116894-2116913 MsG0480018244.01.T01:CDS 50.0%
TCCTAGTGCGTTCACAGGTA+GGG + Chr4:2116239-2116258 MsG0480018244.01.T01:CDS 50.0%
TGGCCTGTATAAAGGAGGAG+GGG - Chr4:2116653-2116672 None:intergenic 50.0%
TGGTCAATCCCATGAGGAAG+AGG - Chr4:2116709-2116728 None:intergenic 50.0%
TGGTCAATTCCATGAGGAGG+TGG - Chr4:2116757-2116776 None:intergenic 50.0%
TGTTGTTCTCCCCGTACACA+TGG - Chr4:2117300-2117319 None:intergenic 50.0%
TTGGGTCCTTCATAACCACG+AGG - Chr4:2116871-2116890 None:intergenic 50.0%
! ACCATTGATAGCTGGCTCTC+TGG + Chr4:2115805-2115824 MsG0480018244.01.T01:intron 50.0%
! ATGTAGCCGACTCCACTTTG+TGG + Chr4:2114445-2114464 MsG0480018244.01.T01:intron 50.0%
! CGTTGTTATTATCTCCGCCG+CGG + Chr4:2113704-2113723 MsG0480018244.01.T01:CDS 50.0%
! CTGCGCAGCTTGCTTTGATT+AGG + Chr4:2113739-2113758 MsG0480018244.01.T01:CDS 50.0%
! GGTGGTGGTGCACCAAAATT+TGG - Chr4:2116608-2116627 None:intergenic 50.0%
! TGTAGCCGACTCCACTTTGT+GGG + Chr4:2114446-2114465 MsG0480018244.01.T01:intron 50.0%
! TTCTTGAAAGCACGAAGGGC+AGG - Chr4:2116993-2117012 None:intergenic 50.0%
!! CCTCTGGAATGATGATCAGG+AGG - Chr4:2115332-2115351 None:intergenic 50.0%
AACAACGATGCGGTCATCGG+AGG - Chr4:2113691-2113710 None:intergenic 55.0%
ACCCTACCTGTGAACGCACT+AGG - Chr4:2116243-2116262 None:intergenic 55.0%
AGAGGAGGAGGATGTCCAGA+AGG - Chr4:2116691-2116710 None:intergenic 55.0%
ATCCCATGAGGAAGAGGAGG+AGG - Chr4:2116703-2116722 None:intergenic 55.0%
ATTCCATGAGGAGGTGGAGG+AGG - Chr4:2116751-2116770 None:intergenic 55.0%
CATCCTCCTCCTCTTCCTCA+TGG + Chr4:2116697-2116716 MsG0480018244.01.T01:CDS 55.0%
CATGGGATTGACCATCCAGC+TGG + Chr4:2116715-2116734 MsG0480018244.01.T01:CDS 55.0%
CCAATACCTGGGGCAACAGA+AGG + Chr4:2117453-2117472 MsG0480018244.01.T01:CDS 55.0%
CCTTCTGTTGCCCCAGGTAT+TGG - Chr4:2117456-2117475 None:intergenic 55.0%
CTCCTAGTGCGTTCACAGGT+AGG + Chr4:2116238-2116257 MsG0480018244.01.T01:CDS 55.0%
GAAGGGCAGGCACAAGAAGA+AGG - Chr4:2116980-2116999 None:intergenic 55.0%
GAGGATCAACATAGCGCCTG+TGG + Chr4:2114811-2114830 MsG0480018244.01.T01:intron 55.0%
GCACCAGAGATCTGAGGATC+AGG - Chr4:2117414-2117433 None:intergenic 55.0%
GCCAGAGAGCCAGCTATCAA+TGG - Chr4:2115809-2115828 None:intergenic 55.0%
GCTGGATGGTCAATCCCATG+AGG - Chr4:2116715-2116734 None:intergenic 55.0%
GGTCGTCATATCTGCGCTAG+AGG + Chr4:2115554-2115573 MsG0480018244.01.T01:intron 55.0%
GGTTGTGTGCTTGGTAGAGG+TGG + Chr4:2113852-2113871 MsG0480018244.01.T01:intron 55.0%
TAGAATCTTGACGCCGTCGC+CGG - Chr4:2113640-2113659 None:intergenic 55.0%
TAGGCTCCTAGTGCGTTCAC+AGG + Chr4:2116234-2116253 MsG0480018244.01.T01:CDS 55.0%
TCGTCACCAGGAGGAGGAAT+AGG - Chr4:2113944-2113963 None:intergenic 55.0%
TGGGGAACCCGTTGAGGATA+AGG - Chr4:2115308-2115327 None:intergenic 55.0%
! ATCGTCTGGTGGTGCTCAAG+TGG + Chr4:2115280-2115299 MsG0480018244.01.T01:CDS 55.0%
! GAAAGGTGGTTCTGTGGTGC+GGG + Chr4:2115465-2115484 MsG0480018244.01.T01:intron 55.0%
! GACCGATTCAGATGAGCGTG+TGG + Chr4:2115533-2115552 MsG0480018244.01.T01:intron 55.0%
! GGAAAGGTGGTTCTGTGGTG+CGG + Chr4:2115464-2115483 MsG0480018244.01.T01:intron 55.0%
! TCACAGGTAGGGTGCCTCTT+GGG + Chr4:2116250-2116269 MsG0480018244.01.T01:CDS 55.0%
! TTCACAGGTAGGGTGCCTCT+TGG + Chr4:2116249-2116268 MsG0480018244.01.T01:CDS 55.0%
!! AAAGGAGGAGGGGTGTCTCT+GGG - Chr4:2116643-2116662 None:intergenic 55.0%
!! ACGGTGTCGGGTTGAGTTTG+AGG - Chr4:2113567-2113586 None:intergenic 55.0%
!! TAAAGGAGGAGGGGTGTCTC+TGG - Chr4:2116644-2116663 None:intergenic 55.0%
ACCAGTCCTTCTGTTGCCCC+AGG - Chr4:2117462-2117481 None:intergenic 60.0%
ACCTGGGGCAACAGAAGGAC+TGG + Chr4:2117458-2117477 MsG0480018244.01.T01:CDS 60.0%
ATGCCTCCTCCACCTCCTCA+TGG + Chr4:2116745-2116764 MsG0480018244.01.T01:CDS 60.0%
CATGACCTCCCTTGCCCAAG+AGG - Chr4:2116267-2116286 None:intergenic 60.0%
GCATAGGTGGACCAGCTGGA+TGG - Chr4:2116729-2116748 None:intergenic 60.0%
TAGCGGCGGCACAGAGAATG+CGG - Chr4:2113593-2113612 None:intergenic 60.0%
! AAGCTGCGCAGCGGATTCCT+CGG - Chr4:2113730-2113749 None:intergenic 60.0%
! GGTGGTTTGGGCATATGGGG+AGG + Chr4:2114861-2114880 MsG0480018244.01.T01:intron 60.0%
! GTAGGGTGCCTCTTGGGCAA+GGG + Chr4:2116256-2116275 MsG0480018244.01.T01:CDS 60.0%
! TGAGGAGGTGGAGGAGGCAT+AGG - Chr4:2116745-2116764 None:intergenic 60.0%
!! AGGAGGGGTGTCTCTGGGAA+CGG - Chr4:2116638-2116657 None:intergenic 60.0%
CTACTCTCCCTCTCCGGCGA+CGG + Chr4:2113624-2113643 MsG0480018244.01.T01:CDS 65.0%
GCATTGGGGGACCAGCTGGA+TGG - Chr4:2116777-2116796 None:intergenic 65.0%
GGAGGATGGGGAACCCGTTG+AGG - Chr4:2115314-2115333 None:intergenic 65.0%
TATTATCTCCGCCGCGGCCG+AGG + Chr4:2113710-2113729 MsG0480018244.01.T01:CDS 65.0%
TCTGGGAACGGTGGCACAGG+TGG - Chr4:2116626-2116645 None:intergenic 65.0%
! GGAGGCATAGGTGGACCAGC+TGG - Chr4:2116733-2116752 None:intergenic 65.0%
! GGAGGTGGAGGAGGCATAGG+TGG - Chr4:2116742-2116761 None:intergenic 65.0%
! GGTAGGGTGCCTCTTGGGCA+AGG + Chr4:2116255-2116274 MsG0480018244.01.T01:CDS 65.0%
! GTCTCTGGGAACGGTGGCAC+AGG - Chr4:2116629-2116648 None:intergenic 65.0%
!! ACAGGCATTGGGGGACCAGC+TGG - Chr4:2116781-2116800 None:intergenic 65.0%
!! AGGGGTGTCTCTGGGAACGG+TGG - Chr4:2116635-2116654 None:intergenic 65.0%
CTTGACGCCGTCGCCGGAGA+GGG - Chr4:2113634-2113653 None:intergenic 70.0%
GGGAACGGTGGCACAGGTGG+TGG - Chr4:2116623-2116642 None:intergenic 70.0%
GGGTCGCGGTCCGCCAAACA+TGG + Chr4:2116831-2116850 MsG0480018244.01.T01:CDS 70.0%
GGGTGCCTCTTGGGCAAGGG+AGG + Chr4:2116259-2116278 MsG0480018244.01.T01:CDS 70.0%
TCTTGACGCCGTCGCCGGAG+AGG - Chr4:2113635-2113654 None:intergenic 70.0%
! AGCGGATTCCTCGGCCGCGG+CGG - Chr4:2113721-2113740 None:intergenic 75.0%
! CGCAGCGGATTCCTCGGCCG+CGG - Chr4:2113724-2113743 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 2113504 2117828 2113504 ID=MsG0480018244.01;Name=MsG0480018244.01
Chr4 mRNA 2113504 2117828 2113504 ID=MsG0480018244.01.T01;Parent=MsG0480018244.01;Name=MsG0480018244.01.T01;_AED=0.31;_eAED=0.31;_QI=0|0.5|0.57|1|1|1|7|262|484
Chr4 exon 2113504 2113815 2113504 ID=MsG0480018244.01.T01:exon:1064;Parent=MsG0480018244.01.T01
Chr4 exon 2115191 2115319 2115191 ID=MsG0480018244.01.T01:exon:1065;Parent=MsG0480018244.01.T01
Chr4 exon 2116136 2116415 2116136 ID=MsG0480018244.01.T01:exon:1066;Parent=MsG0480018244.01.T01
Chr4 exon 2116515 2116915 2116515 ID=MsG0480018244.01.T01:exon:1067;Parent=MsG0480018244.01.T01
Chr4 exon 2117044 2117117 2117044 ID=MsG0480018244.01.T01:exon:1068;Parent=MsG0480018244.01.T01
Chr4 exon 2117228 2117342 2117228 ID=MsG0480018244.01.T01:exon:1069;Parent=MsG0480018244.01.T01
Chr4 exon 2117423 2117828 2117423 ID=MsG0480018244.01.T01:exon:1070;Parent=MsG0480018244.01.T01
Chr4 CDS 2113504 2113815 2113504 ID=MsG0480018244.01.T01:cds;Parent=MsG0480018244.01.T01
Chr4 CDS 2115191 2115319 2115191 ID=MsG0480018244.01.T01:cds;Parent=MsG0480018244.01.T01
Chr4 CDS 2116136 2116415 2116136 ID=MsG0480018244.01.T01:cds;Parent=MsG0480018244.01.T01
Chr4 CDS 2116515 2116915 2116515 ID=MsG0480018244.01.T01:cds;Parent=MsG0480018244.01.T01
Chr4 CDS 2117044 2117117 2117044 ID=MsG0480018244.01.T01:cds;Parent=MsG0480018244.01.T01
Chr4 CDS 2117228 2117342 2117228 ID=MsG0480018244.01.T01:cds;Parent=MsG0480018244.01.T01
Chr4 CDS 2117423 2117566 2117423 ID=MsG0480018244.01.T01:cds;Parent=MsG0480018244.01.T01
Chr4 three_prime_UTR 2117567 2117828 2117567 ID=MsG0480018244.01.T01:three_prime_utr;Parent=MsG0480018244.01.T01
Gene Sequence

>MsG0480018244.01.T01

CTGACATCATACAACGTGCGTGATGTCAAAAACAACAACAACAACAAACGACGCTATGTTCCTCAAACTCAACCCGACACCGTTTTCCGCATTCTCTGTGCCGCCGCTAAATCCGATTCTCTACTCTCCCTCTCCGGCGACGGCGTCAAGATTCTAATTGACGACTTCGCCGGAGATGTCACTTCCTCCGATGACCGCATCGTTGTTATTATCTCCGCCGCGGCCGAGGAATCCGCTGCGCAGCTTGCTTTGATTAGGGTTTTTGAGAGAATGGTGGAGAAGGATAATAATGAGGAGAATAATAAGAAATCGATAACCGGAAATTTTAACGCAGTAAAGAAAGCACTTCTCGCAGTTTCAAGCTGTCTTCAGGATAATGTAGGCAATTCTGGTGGTTTTAAATCGTCTGGTGGTGCTCAAGTGGAACCTTATCCTCAACGGAATTCTGAGCAAAAGCATTCTCCTGCTCAAGATGCTGTTCTTCGCGTTCATGGTCGACTTACAGAGATTGGATTTGAGCATAGTAATGCAGTTGTTGCTAGGCTCCTAGTGCGTTCACAGGTAGGGTGCCTCTTGGGCAAGGGAGGTCATGTTATCTCAGAAATGCGAAGAGTCACTGGTGCCAATATACGTATCTTTTCGAAGGAACAGATCAAGTACATTTCTCACAATGAAGAAGTTGTACAGGTAATTTGCACTTTACACATTTGCAATGTTAACTGTTATTGGGACCATACAATCTGTGCAAGATGCTTTGTTTCACATAACCAGCAGAATTCGAGAAACTATTATCCCAATGAAGAACACTCCTCCAAATTTTGGTGCACCACCACCTGTGCCACCGTTCCCAGAGACACCCCTCCTCCTTTATACAGGCCAAGAAATCACATGTTGCCTTCTGGACATCCTCCTCCTCTTCCTCATGGGATTGACCATCCAGCTGGTCCACCTATGCCTCCTCCACCTCCTCATGGAATTGACCATCCAGCTGGTCCCCCAATGCCTGTTGATCATCAGCATGCATTTTCACATGGTATGGGTCGCGGTCCGCCAAACATGGATCGAGTTCCTTATCCTCGTGGTTATGAAGGACCCAATTCTCCAAGATCACGGAATCCTCAGGCAGTTAACAGAGGAAATTCAGGGGCAACGGCTGATAGTTTTAATTTGCCTTCAAGAAATGGGACTCCTGGAATGACTGGAAACTCATTACAGAATCCAAATAACTCACCCGTTGAGATCACTATCCCTCATATGTATTTAATCCATGTGTACGGGGAGAACAACAGCACCCTAAATCAAATTCGACAGATCTCTGGTGCAAACGTGGTTGTTCATGATCCAATACCTGGGGCAACAGAAGGACTGGTGATTGTATCTGGAACACATGATCAAATTCACTCTGCTCAGTGCCTAATTCAAGGTTTTATTTTTTGCGGACTGACTGCACCTTAG
Protein sequence

>MsG0480018244.01.T01

LTSYNVRDVKNNNNNKRRYVPQTQPDTVFRILCAAAKSDSLLSLSGDGVKILIDDFAGDVTSSDDRIVVIISAAAEESAAQLALIRVFERMVEKDNNEENNKKSITGNFNAVKKALLAVSSCLQDNVGNSGGFKSSGGAQVEPYPQRNSEQKHSPAQDAVLRVHGRLTEIGFEHSNAVVARLLVRSQVGCLLGKGGHVISEMRRVTGANIRIFSKEQIKYISHNEEVVQVICTLHICNVNCYWDHTICARCFVSHNQQNSRNYYPNEEHSSKFWCTTTCATVPRDTPPPLYRPRNHMLPSGHPPPLPHGIDHPAGPPMPPPPPHGIDHPAGPPMPVDHQHAFSHGMGRGPPNMDRVPYPRGYEGPNSPRSRNPQAVNRGNSGATADSFNLPSRNGTPGMTGNSLQNPNNSPVEITIPHMYLIHVYGENNSTLNQIRQISGANVVVHDPIPGATEGLVIVSGTHDQIHSAQCLIQGFIFCGLTAP*