Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040424.01.T01 | AES81250.1 | 84.138 | 145 | 2 | 1 | 1 | 145 | 1 | 124 | 3.99E-80 | 242 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040424.01.T01 | Q9M1J1 | 55 | 140 | 42 | 1 | 1 | 140 | 1 | 119 | 5.47E-50 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040424.01.T01 | G7KRN1 | 84.138 | 145 | 2 | 1 | 1 | 145 | 1 | 124 | 1.90e-80 | 242 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048197.01 | MsG0780040424.01 | 0.815053 | 1.125927e-51 | 7.680989e-49 |
| MsG0080048383.01 | MsG0780040424.01 | 0.800628 | 1.318278e-48 | 6.167945e-46 |
| MsG0080048843.01 | MsG0780040424.01 | 0.802885 | 4.536955e-49 | 2.247871e-46 |
| MsG0180000400.01 | MsG0780040424.01 | -0.805404 | 1.357082e-49 | 7.173426e-47 |
| MsG0180000611.01 | MsG0780040424.01 | 0.844976 | 5.414725e-59 | 8.891881e-56 |
| MsG0180001599.01 | MsG0780040424.01 | 0.805614 | 1.226004e-49 | 6.515573e-47 |
| MsG0180002140.01 | MsG0780040424.01 | 0.829917 | 3.936750e-55 | 4.085884e-52 |
| MsG0180003379.01 | MsG0780040424.01 | 0.861848 | 7.690076e-64 | 2.205904e-60 |
| MsG0180003744.01 | MsG0780040424.01 | 0.821321 | 4.296896e-53 | 3.484335e-50 |
| MsG0180004016.01 | MsG0780040424.01 | 0.843049 | 1.779238e-58 | 2.749465e-55 |
| MsG0180004128.01 | MsG0780040424.01 | 0.820670 | 6.068268e-53 | 4.832088e-50 |
| MsG0180004160.01 | MsG0780040424.01 | 0.801167 | 1.023079e-48 | 4.852624e-46 |
| MsG0180004444.01 | MsG0780040424.01 | 0.805093 | 1.576717e-49 | 8.267947e-47 |
| MsG0180004684.01 | MsG0780040424.01 | 0.832446 | 9.411984e-56 | 1.052202e-52 |
| MsG0180004767.01 | MsG0780040424.01 | 0.805894 | 1.070942e-49 | 5.732591e-47 |
| MsG0180005106.01 | MsG0780040424.01 | 0.870394 | 1.508170e-66 | 5.857223e-63 |
| MsG0180005268.01 | MsG0780040424.01 | 0.826661 | 2.400223e-54 | 2.265333e-51 |
| MsG0180005509.01 | MsG0780040424.01 | 0.805216 | 1.485648e-49 | 7.815143e-47 |
| MsG0180005787.01 | MsG0780040424.01 | 0.832748 | 7.919587e-56 | 8.934094e-53 |
| MsG0180006046.01 | MsG0780040424.01 | 0.834633 | 2.677005e-56 | 3.195394e-53 |
| MsG0180006050.01 | MsG0780040424.01 | 0.823893 | 1.084019e-53 | 9.454865e-51 |
| MsG0780040208.01 | MsG0780040424.01 | 0.846533 | 2.046568e-59 | 3.533521e-56 |
| MsG0780040375.01 | MsG0780040424.01 | -0.812621 | 3.865650e-51 | 2.469755e-48 |
| MsG0780040424.01 | MsG0780040569.01 | 0.816981 | 4.178603e-52 | 3.005411e-49 |
| MsG0780040424.01 | MsG0780040686.01 | 0.808989 | 2.360971e-50 | 1.369638e-47 |
| MsG0780040424.01 | MsG0780040697.01 | 0.828771 | 7.467620e-55 | 7.494215e-52 |
| MsG0780040424.01 | MsG0880042033.01 | 0.835549 | 1.573044e-56 | 1.929919e-53 |
| MsG0780040424.01 | MsG0880042399.01 | -0.843251 | 1.572286e-58 | 2.445352e-55 |
| MsG0780040424.01 | MsG0880043082.01 | 0.800831 | 1.198482e-48 | 5.636329e-46 |
| MsG0780040424.01 | MsG0880043162.01 | 0.810002 | 1.431155e-50 | 8.529206e-48 |
| MsG0780040424.01 | MsG0880043194.01 | 0.855166 | 7.569086e-62 | 1.731599e-58 |
| MsG0780040424.01 | MsG0880043341.01 | 0.808449 | 3.080088e-50 | 1.761717e-47 |
| MsG0780040424.01 | MsG0880044409.01 | 0.820012 | 8.586357e-53 | 6.714536e-50 |
| MsG0780040424.01 | MsG0880045165.01 | 0.813423 | 2.579353e-51 | 1.683742e-48 |
| MsG0780040424.01 | MsG0880045329.01 | 0.811477 | 6.865930e-51 | 4.254498e-48 |
| MsG0780040424.01 | MsG0880045399.01 | 0.835001 | 2.162736e-56 | 2.610354e-53 |
| MsG0780040424.01 | MsG0880045405.01 | 0.817508 | 3.179895e-52 | 2.320293e-49 |
| MsG0780040424.01 | MsG0880045408.01 | 0.832496 | 9.146727e-56 | 1.024121e-52 |
| MsG0780040424.01 | MsG0880045422.01 | 0.823903 | 1.077731e-53 | 9.402814e-51 |
| MsG0780040424.01 | MsG0880045479.01 | 0.845004 | 5.322259e-59 | 8.747073e-56 |
| MsG0780040424.01 | MsG0880045656.01 | 0.825408 | 4.764925e-54 | 4.339359e-51 |
| MsG0780040424.01 | MsG0880045869.01 | 0.810385 | 1.183433e-50 | 7.123200e-48 |
| MsG0780040424.01 | MsG0880045951.01 | 0.819155 | 1.347557e-52 | 1.028799e-49 |
| MsG0780040424.01 | MsG0880046068.01 | 0.851772 | 7.138145e-61 | 1.460247e-57 |
| MsG0780040424.01 | MsG0880046074.01 | 0.812544 | 4.019914e-51 | 2.563188e-48 |
| MsG0780040424.01 | MsG0880046342.01 | 0.804784 | 1.829186e-49 | 9.516300e-47 |
| MsG0780040424.01 | MsG0880046348.01 | -0.829332 | 5.461172e-55 | 5.572866e-52 |
| MsG0780040424.01 | MsG0880046377.01 | 0.837048 | 6.540742e-57 | 8.395469e-54 |
| MsG0780040424.01 | MsG0880046517.01 | 0.823613 | 1.260471e-53 | 1.090701e-50 |
| MsG0780040424.01 | MsG0880047391.01 | 0.802762 | 4.808974e-49 | 2.375297e-46 |
| MsG0280011287.01 | MsG0780040424.01 | 0.821107 | 4.813772e-53 | 3.880569e-50 |
| MsG0280011307.01 | MsG0780040424.01 | 0.813598 | 2.360551e-51 | 1.548280e-48 |
| MsG0380011614.01 | MsG0780040424.01 | 0.821476 | 3.957307e-53 | 3.222830e-50 |
| MsG0380011729.01 | MsG0780040424.01 | 0.808440 | 3.093456e-50 | 1.768940e-47 |
| MsG0380011747.01 | MsG0780040424.01 | 0.820213 | 7.722942e-53 | 6.072826e-50 |
| MsG0380011927.01 | MsG0780040424.01 | 0.813557 | 2.410082e-51 | 1.578985e-48 |
| MsG0380014330.01 | MsG0780040424.01 | 0.810147 | 1.331937e-50 | 7.967451e-48 |
| MsG0680030841.01 | MsG0780040424.01 | 0.825175 | 5.410799e-54 | 4.895324e-51 |
| MsG0680031301.01 | MsG0780040424.01 | 0.825209 | 5.310480e-54 | 4.809183e-51 |
| MsG0680031536.01 | MsG0780040424.01 | 0.860791 | 1.614357e-63 | 4.467074e-60 |
| MsG0680031654.01 | MsG0780040424.01 | 0.820517 | 6.577522e-53 | 5.215614e-50 |
| MsG0680031828.01 | MsG0780040424.01 | 0.829870 | 4.041037e-55 | 4.188915e-52 |
| MsG0680032510.01 | MsG0780040424.01 | -0.803477 | 3.421932e-49 | 1.721323e-46 |
| MsG0680033926.01 | MsG0780040424.01 | 0.814436 | 1.542016e-51 | 1.034656e-48 |
| MsG0680034445.01 | MsG0780040424.01 | 0.807932 | 3.970181e-50 | 2.239897e-47 |
| MsG0680035330.01 | MsG0780040424.01 | -0.813207 | 2.876174e-51 | 1.866398e-48 |
| MsG0480018479.01 | MsG0780040424.01 | 0.802017 | 6.847488e-49 | 3.318477e-46 |
| MsG0480018847.01 | MsG0780040424.01 | 0.824661 | 7.153983e-54 | 6.378344e-51 |
| MsG0480019642.01 | MsG0780040424.01 | 0.804655 | 1.946606e-49 | 1.009304e-46 |
| MsG0480020829.01 | MsG0780040424.01 | 0.801042 | 1.084940e-48 | 5.130147e-46 |
| MsG0480021240.01 | MsG0780040424.01 | 0.801862 | 7.369064e-49 | 3.557295e-46 |
| MsG0480021432.01 | MsG0780040424.01 | 0.811482 | 6.848649e-51 | 4.244355e-48 |
| MsG0480021876.01 | MsG0780040424.01 | -0.809274 | 2.051687e-50 | 1.199360e-47 |
| MsG0480022246.01 | MsG0780040424.01 | 0.837258 | 5.780862e-57 | 7.466919e-54 |
| MsG0480022248.01 | MsG0780040424.01 | 0.845460 | 4.006809e-59 | 6.681795e-56 |
| MsG0480022672.01 | MsG0780040424.01 | 0.816854 | 4.462605e-52 | 3.198314e-49 |
| MsG0480022916.01 | MsG0780040424.01 | 0.800352 | 1.500416e-48 | 6.971265e-46 |
| MsG0480023240.01 | MsG0780040424.01 | 0.824585 | 7.451989e-54 | 6.629381e-51 |
| MsG0480023377.01 | MsG0780040424.01 | 0.806827 | 6.808530e-50 | 3.732528e-47 |
| MsG0480023841.01 | MsG0780040424.01 | -0.827966 | 1.168373e-54 | 1.145500e-51 |
| MsG0580024084.01 | MsG0780040424.01 | 0.813263 | 2.796721e-51 | 1.817590e-48 |
| MsG0580024191.01 | MsG0780040424.01 | 0.810442 | 1.150560e-50 | 6.935915e-48 |
| MsG0580024311.01 | MsG0780040424.01 | 0.800327 | 1.518240e-48 | 7.049667e-46 |
| MsG0580025278.01 | MsG0780040424.01 | 0.800130 | 1.665223e-48 | 7.693320e-46 |
| MsG0580025520.01 | MsG0780040424.01 | 0.820581 | 6.360677e-53 | 5.052484e-50 |
| MsG0380015220.01 | MsG0780040424.01 | 0.802394 | 5.728238e-49 | 2.802960e-46 |
| MsG0380015607.01 | MsG0780040424.01 | 0.841171 | 5.585487e-58 | 8.138858e-55 |
| MsG0380016117.01 | MsG0780040424.01 | 0.800693 | 1.278347e-48 | 5.990862e-46 |
| MsG0380016178.01 | MsG0780040424.01 | -0.805036 | 1.620355e-49 | 8.484307e-47 |
| MsG0380017279.01 | MsG0780040424.01 | 0.842096 | 3.186334e-58 | 4.779546e-55 |
| MsG0380017476.01 | MsG0780040424.01 | 0.814830 | 1.261811e-51 | 8.556440e-49 |
| MsG0380017512.01 | MsG0780040424.01 | 0.842000 | 3.377571e-58 | 5.050847e-55 |
| MsG0380017914.01 | MsG0780040424.01 | -0.821473 | 3.962611e-53 | 3.226898e-50 |
| MsG0480018213.01 | MsG0780040424.01 | 0.828947 | 6.772277e-55 | 6.831328e-52 |
| MsG0480018235.01 | MsG0780040424.01 | 0.806420 | 8.297199e-50 | 4.501372e-47 |
| MsG0480018244.01 | MsG0780040424.01 | -0.805153 | 1.531449e-49 | 8.043199e-47 |
| MsG0480018292.01 | MsG0780040424.01 | 0.823212 | 1.564270e-53 | 1.338291e-50 |
| MsG0580026225.01 | MsG0780040424.01 | 0.822256 | 2.611406e-53 | 2.174399e-50 |
| MsG0580028526.01 | MsG0780040424.01 | 0.802449 | 5.580516e-49 | 2.734380e-46 |
| MsG0580028597.01 | MsG0780040424.01 | 0.845820 | 3.199409e-59 | 5.398677e-56 |
| MsG0580028664.01 | MsG0780040424.01 | -0.848053 | 7.831280e-60 | 1.419205e-56 |
| MsG0580029628.01 | MsG0780040424.01 | 0.827719 | 1.339751e-54 | 1.303996e-51 |
| MsG0580029658.01 | MsG0780040424.01 | 0.828215 | 1.017476e-54 | 1.004804e-51 |
| MsG0580029801.01 | MsG0780040424.01 | 0.812551 | 4.004570e-51 | 2.553869e-48 |
| MsG0280006501.01 | MsG0780040424.01 | 0.817054 | 4.023664e-52 | 2.899659e-49 |
| MsG0280006519.01 | MsG0780040424.01 | 0.809729 | 1.638892e-50 | 9.697369e-48 |
| MsG0280006679.01 | MsG0780040424.01 | 0.841376 | 4.932409e-58 | 7.233853e-55 |
| MsG0280006682.01 | MsG0780040424.01 | 0.806492 | 8.012930e-50 | 4.355161e-47 |
| MsG0280006892.01 | MsG0780040424.01 | 0.807001 | 6.256049e-50 | 3.445111e-47 |
| MsG0280007109.01 | MsG0780040424.01 | 0.830516 | 2.810280e-55 | 2.967467e-52 |
| MsG0280007549.01 | MsG0780040424.01 | 0.810353 | 1.202095e-50 | 7.229819e-48 |
| MsG0280007551.01 | MsG0780040424.01 | 0.820437 | 6.861991e-53 | 5.429529e-50 |
| MsG0280007775.01 | MsG0780040424.01 | 0.854214 | 1.428954e-61 | 3.168320e-58 |
| MsG0280007847.01 | MsG0780040424.01 | 0.804344 | 2.259823e-49 | 1.162366e-46 |
| MsG0280008758.01 | MsG0780040424.01 | 0.802092 | 6.610311e-49 | 3.209640e-46 |
| MsG0280009270.01 | MsG0780040424.01 | 0.829820 | 4.157160e-55 | 4.303251e-52 |
| MsG0280009554.01 | MsG0780040424.01 | 0.819620 | 1.055309e-52 | 8.161926e-50 |
| MsG0280009676.01 | MsG0780040424.01 | -0.817904 | 2.588865e-52 | 1.909518e-49 |
| MsG0280010547.01 | MsG0780040424.01 | 0.804635 | 1.964897e-49 | 1.018244e-46 |
| MsG0780035937.01 | MsG0780040424.01 | 0.812629 | 3.850240e-51 | 2.460425e-48 |
| MsG0780036117.01 | MsG0780040424.01 | 0.800921 | 1.148448e-48 | 5.413669e-46 |
| MsG0780036247.01 | MsG0780040424.01 | -0.809044 | 2.298774e-50 | 1.335527e-47 |
| MsG0780036845.01 | MsG0780040424.01 | 0.850490 | 1.642045e-60 | 3.221602e-57 |
| MsG0780039340.01 | MsG0780040424.01 | 0.815382 | 9.514685e-52 | 6.549851e-49 |
| MsG0780039442.01 | MsG0780040424.01 | 0.829128 | 6.120514e-55 | 6.207482e-52 |
| MsG0780039828.01 | MsG0780040424.01 | 0.811618 | 6.397980e-51 | 3.979027e-48 |
| MsG0780039943.01 | MsG0780040424.01 | 0.808605 | 2.852490e-50 | 1.638041e-47 |
| MsG0780040070.01 | MsG0780040424.01 | 0.805865 | 1.086062e-49 | 5.809423e-47 |
| MsG0780040182.01 | MsG0780040424.01 | 0.810886 | 9.220161e-51 | 5.625067e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040424.01.T01 | MTR_7g090210 | 84.138 | 145 | 2 | 1 | 1 | 145 | 1 | 124 | 4.83e-84 | 242 |
| MsG0780040424.01.T01 | MTR_7g090210 | 82.270 | 141 | 4 | 1 | 1 | 141 | 1 | 120 | 6.72e-81 | 236 |
| MsG0780040424.01.T01 | MTR_5g090010 | 50.704 | 142 | 48 | 2 | 1 | 141 | 4 | 124 | 1.21e-44 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040424.01.T01 | AT3G57090 | 55.000 | 140 | 42 | 1 | 1 | 140 | 1 | 119 | 5.58e-51 | 160 |
| MsG0780040424.01.T01 | AT3G57090 | 55.000 | 140 | 42 | 1 | 1 | 140 | 1 | 119 | 5.58e-51 | 160 |
| MsG0780040424.01.T01 | AT5G12390 | 48.276 | 145 | 46 | 3 | 1 | 140 | 1 | 121 | 1.60e-39 | 131 |
Find 41 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTAGGAGTCGGCAGCTTC+TGG | 0.252357 | 7:-77380378 | MsG0780040424.01.T01:CDS |
| ATTATGATTCGCAGCTTCTT+TGG | 0.302296 | 7:-77380477 | MsG0780040424.01.T01:intron |
| GTAACTTTCCGTTGAGTTGC+AGG | 0.337755 | 7:-77381907 | MsG0780040424.01.T01:five_prime_UTR |
| TTCTTGCTGTTGGGTACTAC+AGG | 0.348000 | 7:-77380412 | MsG0780040424.01.T01:CDS |
| AGCTTTATCTTCTTGCTGTT+GGG | 0.356980 | 7:-77380421 | MsG0780040424.01.T01:CDS |
| GCAGCTTCTGGAGCAATGTT+TGG | 0.361994 | 7:-77380366 | MsG0780040424.01.T01:CDS |
| TTATGATTCGCAGCTTCTTT+GGG | 0.372741 | 7:-77380476 | MsG0780040424.01.T01:intron |
| CATGGGCACTTGTTCATTCA+AGG | 0.399932 | 7:-77381349 | MsG0780040424.01.T01:CDS |
| AAGCTTTATCTTCTTGCTGT+TGG | 0.416064 | 7:-77380422 | MsG0780040424.01.T01:CDS |
| AGCTTCTCTCTTTGATGTAA+AGG | 0.431754 | 7:+77380440 | None:intergenic |
| TCGTCGATGGAGGCTAAAAT+CGG | 0.445374 | 7:-77381870 | MsG0780040424.01.T01:exon |
| GCTTCTGGAGCAATGTTTGG+AGG | 0.445797 | 7:-77380363 | MsG0780040424.01.T01:CDS |
| TCCCTCGGAAACTTCTTTAC+CGG | 0.457316 | 7:-77381834 | MsG0780040424.01.T01:CDS |
| TGAATTGCAAATACACTGTT+TGG | 0.463003 | 7:-77381483 | MsG0780040424.01.T01:CDS |
| GAAGTTGCAGAGGCTTCTAA+TGG | 0.471526 | 7:-77381413 | MsG0780040424.01.T01:CDS |
| GGAAGCTTCTTTGAATCCCT+CGG | 0.481996 | 7:-77381849 | MsG0780040424.01.T01:CDS |
| TCCAGAAGCTGCCGACTCCT+AGG | 0.515588 | 7:+77380377 | None:intergenic |
| TGATAGTTAACCGTCGTCGA+TGG | 0.516268 | 7:-77381883 | MsG0780040424.01.T01:exon |
| AGTAATTATACTTTCGAGCA+TGG | 0.516555 | 7:+77381298 | None:intergenic |
| CCGGCGGCGATCAGATCCCT+TGG | 0.523323 | 7:-77381815 | MsG0780040424.01.T01:CDS |
| AGAGCATAATGAGGTTGTCA+TGG | 0.535428 | 7:-77381367 | MsG0780040424.01.T01:CDS |
| ACAGGGCCACTGATTATCCT+AGG | 0.539913 | 7:-77380394 | MsG0780040424.01.T01:CDS |
| TCTTGCTGTTGGGTACTACA+GGG | 0.572141 | 7:-77380411 | MsG0780040424.01.T01:CDS |
| TAACTTTCCGTTGAGTTGCA+GGG | 0.573150 | 7:-77381906 | MsG0780040424.01.T01:five_prime_UTR |
| CCAAGGGATCTGATCGCCGC+CGG | 0.574729 | 7:+77381815 | None:intergenic |
| TAGTTAACCGTCGTCGATGG+AGG | 0.589229 | 7:-77381880 | MsG0780040424.01.T01:exon |
| GAGCATAATGAGGTTGTCAT+GGG | 0.590973 | 7:-77381366 | MsG0780040424.01.T01:CDS |
| CTGTGAAAGAGAAGTTGCAG+AGG | 0.603501 | 7:-77381423 | MsG0780040424.01.T01:CDS |
| TGACATCACGGTCGCACCAA+GGG | 0.605500 | 7:+77381799 | None:intergenic |
| CCACTGATTATCCTAGGAGT+CGG | 0.611803 | 7:-77380388 | MsG0780040424.01.T01:CDS |
| CGCCGGTAAAGAAGTTTCCG+AGG | 0.620017 | 7:+77381832 | None:intergenic |
| GCCGGTAAAGAAGTTTCCGA+GGG | 0.620980 | 7:+77381833 | None:intergenic |
| ACTATCACCCTGCAACTCAA+CGG | 0.626960 | 7:+77381899 | None:intergenic |
| CTCGGAAACTTCTTTACCGG+CGG | 0.628306 | 7:-77381831 | MsG0780040424.01.T01:CDS |
| ATGACATCACGGTCGCACCA+AGG | 0.644581 | 7:+77381798 | None:intergenic |
| GTAAGAATGAGAGCATAATG+AGG | 0.656100 | 7:-77381376 | MsG0780040424.01.T01:CDS |
| TTTCGAGCATGGCAATCCCA+CGG | 0.664812 | 7:+77381309 | None:intergenic |
| AACAAGAAGATATTCACCGT+GGG | 0.666532 | 7:-77381325 | MsG0780040424.01.T01:CDS |
| AAGTTACAGAGATGACATCA+CGG | 0.723970 | 7:+77381787 | None:intergenic |
| CCGACTCCTAGGATAATCAG+TGG | 0.729427 | 7:+77380388 | None:intergenic |
| CAACAAGAAGATATTCACCG+TGG | 0.736975 | 7:-77381326 | MsG0780040424.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATATAAGAAAAAATATT+CGG | + | Chr7:77381023-77381042 | None:intergenic | 10.0% |
| !! | AATCATATTCATATGTTCAT+TGG | - | Chr7:77381117-77381136 | MsG0780040424.01.T01:intron | 20.0% |
| !! | ATAATAATTATGGATGTACA+AGG | + | Chr7:77381801-77381820 | None:intergenic | 20.0% |
| !! | ATGCAATACAACTAAAATAA+TGG | - | Chr7:77381385-77381404 | MsG0780040424.01.T01:CDS | 20.0% |
| !! | TACAAAAAAACAAGAAATAC+AGG | - | Chr7:77380364-77380383 | MsG0780040424.01.T01:CDS | 20.0% |
| !! | TCAAAAAAGCTATTAATTTC+CGG | + | Chr7:77380607-77380626 | None:intergenic | 20.0% |
| !! | TTCTGATTATTATTCTGTAT+AGG | - | Chr7:77381039-77381058 | MsG0780040424.01.T01:intron | 20.0% |
| !!! | ATTTTGATTTGTTTGAGTTT+AGG | - | Chr7:77380727-77380746 | MsG0780040424.01.T01:intron | 20.0% |
| !!! | TTTTGATTTGTTTGAGTTTA+GGG | - | Chr7:77380728-77380747 | MsG0780040424.01.T01:intron | 20.0% |
| ! | AAAAAAACACATAGCAAGAA+AGG | + | Chr7:77381717-77381736 | None:intergenic | 25.0% |
| ! | AACATCAATCATATCTCTTT+AGG | + | Chr7:77381747-77381766 | None:intergenic | 25.0% |
| ! | AAGAAATAACATGAATTGAG+AGG | + | Chr7:77380550-77380569 | None:intergenic | 25.0% |
| ! | ACATCAATCATATCTCTTTA+GGG | + | Chr7:77381746-77381765 | None:intergenic | 25.0% |
| ! | ACTCAAACAAATCAAAATTG+AGG | + | Chr7:77380725-77380744 | None:intergenic | 25.0% |
| ! | AGAAATAACATGAATTGAGA+GGG | + | Chr7:77380549-77380568 | None:intergenic | 25.0% |
| ! | ATTATTCTGTATAGGTTCAT+TGG | - | Chr7:77381047-77381066 | MsG0780040424.01.T01:intron | 25.0% |
| ! | CAAATTAATGTAACTTCTCT+TGG | - | Chr7:77381272-77381291 | MsG0780040424.01.T01:intron | 25.0% |
| ! | CTCAAACAAATCAAAATTGA+GGG | + | Chr7:77380724-77380743 | None:intergenic | 25.0% |
| ! | TATCACACAAACTTTAATGT+AGG | - | Chr7:77381462-77381481 | MsG0780040424.01.T01:CDS | 25.0% |
| !! | ATTTTCAATCTGGTTATGAA+AGG | + | Chr7:77380756-77380775 | None:intergenic | 25.0% |
| !!! | ACCAGATTGAAAATTTTAAC+TGG | - | Chr7:77380762-77380781 | MsG0780040424.01.T01:intron | 25.0% |
| !!! | CCAGATTGAAAATTTTAACT+GGG | - | Chr7:77380763-77380782 | MsG0780040424.01.T01:intron | 25.0% |
| !!! | TTTCATTGCATTGTTTTGAA+GGG | - | Chr7:77380847-77380866 | MsG0780040424.01.T01:intron | 25.0% |
| !!! | TTTTCATTGCATTGTTTTGA+AGG | - | Chr7:77380846-77380865 | MsG0780040424.01.T01:intron | 25.0% |
| ACAAACTTTAATGTAGGAGT+AGG | - | Chr7:77381468-77381487 | MsG0780040424.01.T01:CDS | 30.0% | |
| AGTAATTATACTTTCGAGCA+TGG | + | Chr7:77380998-77381017 | None:intergenic | 30.0% | |
| GCTGCGAATCATAATAATTA+TGG | + | Chr7:77381811-77381830 | None:intergenic | 30.0% | |
| TATTATGCCCTTTATATGCA+TGG | - | Chr7:77381771-77381790 | MsG0780040424.01.T01:intron | 30.0% | |
| TGAATTGCAAATACACTGTT+TGG | - | Chr7:77380810-77380829 | MsG0780040424.01.T01:intron | 30.0% | |
| TTACTAAATTAGCGTGTGAA+GGG | - | Chr7:77381500-77381519 | MsG0780040424.01.T01:intron | 30.0% | |
| TTTACTAAATTAGCGTGTGA+AGG | - | Chr7:77381499-77381518 | MsG0780040424.01.T01:intron | 30.0% | |
| ! | CCCAGTTAAAATTTTCAATC+TGG | + | Chr7:77380766-77380785 | None:intergenic | 30.0% |
| ! | TACATTAATTTGAGCACAAC+AGG | + | Chr7:77381264-77381283 | None:intergenic | 30.0% |
| !!! | ATTTTAACTGGGATTATTGC+TGG | - | Chr7:77380774-77380793 | MsG0780040424.01.T01:intron | 30.0% |
| AAAACACATAGCAAGAAAGG+AGG | + | Chr7:77381714-77381733 | None:intergenic | 35.0% | |
| AAACACATAGCAAGAAAGGA+GGG | + | Chr7:77381713-77381732 | None:intergenic | 35.0% | |
| AACAAGAAGATATTCACCGT+GGG | - | Chr7:77380968-77380987 | MsG0780040424.01.T01:intron | 35.0% | |
| AAGTTACAGAGATGACATCA+CGG | + | Chr7:77380509-77380528 | None:intergenic | 35.0% | |
| ACAACTAGCAATGAAGACAT+TGG | + | Chr7:77381310-77381329 | None:intergenic | 35.0% | |
| ACTCAGAATTTCAATTGTGC+CGG | - | Chr7:77380585-77380604 | MsG0780040424.01.T01:intron | 35.0% | |
| ACTTTAATGTAGGAGTAGGA+CGG | - | Chr7:77381472-77381491 | MsG0780040424.01.T01:CDS | 35.0% | |
| AGCTTCTCTCTTTGATGTAA+AGG | + | Chr7:77381856-77381875 | None:intergenic | 35.0% | |
| AGCTTGAGAGGAAAATCTAA+CGG | - | Chr7:77381541-77381560 | MsG0780040424.01.T01:intron | 35.0% | |
| ATCACAAGACGTAGAATAGA+CGG | + | Chr7:77381148-77381167 | None:intergenic | 35.0% | |
| ATTATGATTCGCAGCTTCTT+TGG | - | Chr7:77381816-77381835 | MsG0780040424.01.T01:CDS | 35.0% | |
| GCAGTTCGAATTATTCATTC+AGG | + | Chr7:77381349-77381368 | None:intergenic | 35.0% | |
| GTTGGAGAAAGTTTAGATCA+TGG | + | Chr7:77381577-77381596 | None:intergenic | 35.0% | |
| TCAACGCTATATTGCATACT+CGG | - | Chr7:77381179-77381198 | MsG0780040424.01.T01:intron | 35.0% | |
| TCAAGCTGGTCCAATTATAA+TGG | + | Chr7:77381528-77381547 | None:intergenic | 35.0% | |
| TTATGATTCGCAGCTTCTTT+GGG | - | Chr7:77381817-77381836 | MsG0780040424.01.T01:CDS | 35.0% | |
| TTCGAATTATTCATTCAGGC+TGG | + | Chr7:77381345-77381364 | None:intergenic | 35.0% | |
| TTCTACGTCTTGTGATTTCT+TGG | - | Chr7:77381152-77381171 | MsG0780040424.01.T01:intron | 35.0% | |
| ! | AAAATTGAGGGCGCAAAATA+TGG | + | Chr7:77380712-77380731 | None:intergenic | 35.0% |
| ! | AAGCTTTATCTTCTTGCTGT+TGG | - | Chr7:77381871-77381890 | MsG0780040424.01.T01:exon | 35.0% |
| ! | GTAAGAATGAGAGCATAATG+AGG | - | Chr7:77380917-77380936 | MsG0780040424.01.T01:intron | 35.0% |
| !! | AGCTTTATCTTCTTGCTGTT+GGG | - | Chr7:77381872-77381891 | MsG0780040424.01.T01:exon | 35.0% |
| AACTGGGATTATTGCTGGAA+TGG | - | Chr7:77380779-77380798 | MsG0780040424.01.T01:intron | 40.0% | |
| AAGGTCAGCCATGCATATAA+AGG | + | Chr7:77381782-77381801 | None:intergenic | 40.0% | |
| AGAGCATAATGAGGTTGTCA+TGG | - | Chr7:77380926-77380945 | MsG0780040424.01.T01:intron | 40.0% | |
| AGGTCAGCCATGCATATAAA+GGG | + | Chr7:77381781-77381800 | None:intergenic | 40.0% | |
| CAACAAGAAGATATTCACCG+TGG | - | Chr7:77380967-77380986 | MsG0780040424.01.T01:intron | 40.0% | |
| GAGCATAATGAGGTTGTCAT+GGG | - | Chr7:77380927-77380946 | MsG0780040424.01.T01:intron | 40.0% | |
| TAGCAGCTATATGTGACAGA+AGG | + | Chr7:77381226-77381245 | None:intergenic | 40.0% | |
| TATAATTGGACCAGCTTGAG+AGG | - | Chr7:77381529-77381548 | MsG0780040424.01.T01:intron | 40.0% | |
| TCACAAGACGTAGAATAGAC+GGG | + | Chr7:77381147-77381166 | None:intergenic | 40.0% | |
| ! | GTTAGATTTTCCTCTCAAGC+TGG | + | Chr7:77381542-77381561 | None:intergenic | 40.0% |
| ! | TAACTTTCCGTTGAGTTGCA+GGG | - | Chr7:77380387-77380406 | MsG0780040424.01.T01:CDS | 40.0% |
| !! | GTGAAGGGCACCATTATAAT+TGG | - | Chr7:77381515-77381534 | MsG0780040424.01.T01:intron | 40.0% |
| ACTATCACCCTGCAACTCAA+CGG | + | Chr7:77380397-77380416 | None:intergenic | 45.0% | |
| AGAAGTCTGCTTTGCATCGT+TGG | + | Chr7:77381595-77381614 | None:intergenic | 45.0% | |
| AGAGGGATGAGAGAAAGAAG+AGG | + | Chr7:77380532-77380551 | None:intergenic | 45.0% | |
| CATGGGCACTTGTTCATTCA+AGG | - | Chr7:77380944-77380963 | MsG0780040424.01.T01:intron | 45.0% | |
| CTGTGAAAGAGAAGTTGCAG+AGG | - | Chr7:77380870-77380889 | MsG0780040424.01.T01:intron | 45.0% | |
| GAAGTTGCAGAGGCTTCTAA+TGG | - | Chr7:77380880-77380899 | MsG0780040424.01.T01:intron | 45.0% | |
| GGAAGCTTCTTTGAATCCCT+CGG | - | Chr7:77380444-77380463 | MsG0780040424.01.T01:CDS | 45.0% | |
| TAGACAACTTCCTCGCCTTA+GGG | - | Chr7:77381677-77381696 | MsG0780040424.01.T01:intron | 45.0% | |
| TCCCTCGGAAACTTCTTTAC+CGG | - | Chr7:77380459-77380478 | MsG0780040424.01.T01:CDS | 45.0% | |
| TCGTCGATGGAGGCTAAAAT+CGG | - | Chr7:77380423-77380442 | MsG0780040424.01.T01:CDS | 45.0% | |
| TGATAGTTAACCGTCGTCGA+TGG | - | Chr7:77380410-77380429 | MsG0780040424.01.T01:CDS | 45.0% | |
| TTAATGTAGGAGTAGGACGG+TGG | - | Chr7:77381475-77381494 | MsG0780040424.01.T01:CDS | 45.0% | |
| TTAGACAACTTCCTCGCCTT+AGG | - | Chr7:77381676-77381695 | MsG0780040424.01.T01:intron | 45.0% | |
| ! | AGATCAGCCTGAGATGCTTT+TGG | - | Chr7:77381646-77381665 | MsG0780040424.01.T01:intron | 45.0% |
| ! | CCACTGATTATCCTAGGAGT+CGG | - | Chr7:77381905-77381924 | MsG0780040424.01.T01:five_prime_UTR | 45.0% |
| ! | GTAACTTTCCGTTGAGTTGC+AGG | - | Chr7:77380386-77380405 | MsG0780040424.01.T01:CDS | 45.0% |
| !! | ATTCACGCCAAAAGCATCTC+AGG | + | Chr7:77381656-77381675 | None:intergenic | 45.0% |
| !! | ATTTTAGCCTCCATCGACGA+CGG | + | Chr7:77380423-77380442 | None:intergenic | 45.0% |
| !! | TCTTGCTGTTGGGTACTACA+GGG | - | Chr7:77381882-77381901 | MsG0780040424.01.T01:exon | 45.0% |
| !! | TTCTTGCTGTTGGGTACTAC+AGG | - | Chr7:77381881-77381900 | MsG0780040424.01.T01:exon | 45.0% |
| CCGACTCCTAGGATAATCAG+TGG | + | Chr7:77381908-77381927 | None:intergenic | 50.0% | |
| CTCGGAAACTTCTTTACCGG+CGG | - | Chr7:77380462-77380481 | MsG0780040424.01.T01:CDS | 50.0% | |
| GCCGGTAAAGAAGTTTCCGA+GGG | + | Chr7:77380463-77380482 | None:intergenic | 50.0% | |
| TAGTTAACCGTCGTCGATGG+AGG | - | Chr7:77380413-77380432 | MsG0780040424.01.T01:CDS | 50.0% | |
| TTTCGAGCATGGCAATCCCA+CGG | + | Chr7:77380987-77381006 | None:intergenic | 50.0% | |
| ! | ACAGGGCCACTGATTATCCT+AGG | - | Chr7:77381899-77381918 | MsG0780040424.01.T01:five_prime_UTR | 50.0% |
| !! | GCAGCTTCTGGAGCAATGTT+TGG | - | Chr7:77381927-77381946 | MsG0780040424.01.T01:five_prime_UTR | 50.0% |
| !! | GCTTCTGGAGCAATGTTTGG+AGG | - | Chr7:77381930-77381949 | MsG0780040424.01.T01:five_prime_UTR | 50.0% |
| ATGACATCACGGTCGCACCA+AGG | + | Chr7:77380498-77380517 | None:intergenic | 55.0% | |
| CAAGAAAGGAGGGACTGCAG+TGG | + | Chr7:77381703-77381722 | None:intergenic | 55.0% | |
| CAATGACCCCAGAGCCACTT+CGG | + | Chr7:77381426-77381445 | None:intergenic | 55.0% | |
| CCTTCAAAACGCCACCGAAG+TGG | - | Chr7:77381409-77381428 | MsG0780040424.01.T01:CDS | 55.0% | |
| CGCCGGTAAAGAAGTTTCCG+AGG | + | Chr7:77380464-77380483 | None:intergenic | 55.0% | |
| TGACATCACGGTCGCACCAA+GGG | + | Chr7:77380497-77380516 | None:intergenic | 55.0% | |
| ! | CCACTTCGGTGGCGTTTTGA+AGG | + | Chr7:77381412-77381431 | None:intergenic | 55.0% |
| AAACGCCACCGAAGTGGCTC+TGG | - | Chr7:77381415-77381434 | MsG0780040424.01.T01:CDS | 60.0% | |
| AACGCCACCGAAGTGGCTCT+GGG | - | Chr7:77381416-77381435 | MsG0780040424.01.T01:CDS | 60.0% | |
| TCCTAGGAGTCGGCAGCTTC+TGG | - | Chr7:77381915-77381934 | MsG0780040424.01.T01:five_prime_UTR | 60.0% | |
| !! | TCCAGAAGCTGCCGACTCCT+AGG | + | Chr7:77381919-77381938 | None:intergenic | 60.0% |
| ACTGCAGTGGCCCTAAGGCG+AGG | + | Chr7:77381690-77381709 | None:intergenic | 65.0% | |
| CCAAGGGATCTGATCGCCGC+CGG | + | Chr7:77380481-77380500 | None:intergenic | 65.0% | |
| GAGGGACTGCAGTGGCCCTA+AGG | + | Chr7:77381695-77381714 | None:intergenic | 65.0% | |
| TGACCCCAGAGCCACTTCGG+TGG | + | Chr7:77381423-77381442 | None:intergenic | 65.0% | |
| ! | ACGCCACCGAAGTGGCTCTG+GGG | - | Chr7:77381417-77381436 | MsG0780040424.01.T01:CDS | 65.0% |
| CCGGCGGCGATCAGATCCCT+TGG | - | Chr7:77380478-77380497 | MsG0780040424.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 77380343 | 77381972 | 77380343 | ID=MsG0780040424.01;Name=MsG0780040424.01 |
| Chr7 | mRNA | 77380343 | 77381972 | 77380343 | ID=MsG0780040424.01.T01;Parent=MsG0780040424.01;Name=MsG0780040424.01.T01;_AED=0.50;_eAED=0.55;_QI=86|0.5|0.33|1|0.5|0.33|3|0|145 |
| Chr7 | exon | 77380343 | 77380485 | 77380343 | ID=MsG0780040424.01.T01:exon:14882;Parent=MsG0780040424.01.T01 |
| Chr7 | exon | 77381309 | 77381510 | 77381309 | ID=MsG0780040424.01.T01:exon:14881;Parent=MsG0780040424.01.T01 |
| Chr7 | exon | 77381794 | 77381972 | 77381794 | ID=MsG0780040424.01.T01:exon:14880;Parent=MsG0780040424.01.T01 |
| Chr7 | five_prime_UTR | 77381887 | 77381972 | 77381887 | ID=MsG0780040424.01.T01:five_prime_utr;Parent=MsG0780040424.01.T01 |
| Chr7 | CDS | 77381794 | 77381886 | 77381794 | ID=MsG0780040424.01.T01:cds;Parent=MsG0780040424.01.T01 |
| Chr7 | CDS | 77381309 | 77381510 | 77381309 | ID=MsG0780040424.01.T01:cds;Parent=MsG0780040424.01.T01 |
| Chr7 | CDS | 77380343 | 77380485 | 77380343 | ID=MsG0780040424.01.T01:cds;Parent=MsG0780040424.01.T01 |
| Gene Sequence |
| Protein sequence |
