Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047703.01.T01 | XP_003610518.1 | 87.248 | 149 | 7 | 3 | 3 | 150 | 4 | 141 | 5.91E-60 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047899.01 | MsG0880047703.01 | 0.806368 | 8.508985e-50 | 4.610166e-47 |
| MsG0080048016.01 | MsG0880047703.01 | 0.804515 | 2.081886e-49 | 1.075501e-46 |
| MsG0080048065.01 | MsG0880047703.01 | 0.847196 | 1.347771e-59 | 2.376954e-56 |
| MsG0080048152.01 | MsG0880047703.01 | 0.840509 | 8.332433e-58 | 1.189566e-54 |
| MsG0080048727.01 | MsG0880047703.01 | 0.847914 | 8.555153e-60 | 1.543843e-56 |
| MsG0080048748.01 | MsG0880047703.01 | 0.810249 | 1.265828e-50 | 7.592567e-48 |
| MsG0080048761.01 | MsG0880047703.01 | -0.803042 | 4.210412e-49 | 2.094362e-46 |
| MsG0080048773.01 | MsG0880047703.01 | 0.843068 | 1.758108e-58 | 2.718581e-55 |
| MsG0080048802.01 | MsG0880047703.01 | 0.849547 | 3.015088e-60 | 5.735221e-57 |
| MsG0080048849.01 | MsG0880047703.01 | 0.865860 | 4.347110e-65 | 1.435615e-61 |
| MsG0080048876.01 | MsG0880047703.01 | 0.835806 | 1.354250e-56 | 1.674337e-53 |
| MsG0080048878.01 | MsG0880047703.01 | 0.888355 | 6.355430e-73 | 4.907259e-69 |
| MsG0080048938.01 | MsG0880047703.01 | 0.805169 | 1.520096e-49 | 7.986728e-47 |
| MsG0080049011.01 | MsG0880047703.01 | 0.820801 | 5.662374e-53 | 4.525646e-50 |
| MsG0080049029.01 | MsG0880047703.01 | 0.808393 | 3.166939e-50 | 1.808694e-47 |
| MsG0080049040.01 | MsG0880047703.01 | 0.875992 | 1.989597e-68 | 9.487482e-65 |
| MsG0080049068.01 | MsG0880047703.01 | 0.919243 | 5.738635e-87 | 1.824478e-82 |
| MsG0080049069.01 | MsG0880047703.01 | 0.850203 | 1.976637e-60 | 3.842061e-57 |
| MsG0080049147.01 | MsG0880047703.01 | 0.830720 | 2.505494e-55 | 2.661803e-52 |
| MsG0180000026.01 | MsG0880047703.01 | 0.823609 | 1.263086e-53 | 1.092846e-50 |
| MsG0180000113.01 | MsG0880047703.01 | 0.847934 | 8.442960e-60 | 1.524593e-56 |
| MsG0180000114.01 | MsG0880047703.01 | 0.839073 | 1.969999e-57 | 2.690173e-54 |
| MsG0180000218.01 | MsG0880047703.01 | -0.810076 | 1.379444e-50 | 8.236558e-48 |
| MsG0180000246.01 | MsG0880047703.01 | 0.824412 | 8.186497e-54 | 7.245292e-51 |
| MsG0180000354.01 | MsG0880047703.01 | 0.878428 | 2.830946e-69 | 1.477846e-65 |
| MsG0180000355.01 | MsG0880047703.01 | 0.921490 | 3.346986e-88 | 1.201295e-83 |
| MsG0180000384.01 | MsG0880047703.01 | 0.811899 | 5.557924e-51 | 3.482510e-48 |
| MsG0180000481.01 | MsG0880047703.01 | 0.808528 | 2.962932e-50 | 1.698148e-47 |
| MsG0180000482.01 | MsG0880047703.01 | 0.815197 | 1.046105e-51 | 7.164396e-49 |
| MsG0180000509.01 | MsG0880047703.01 | 0.819510 | 1.118229e-52 | 8.622718e-50 |
| MsG0180000599.01 | MsG0880047703.01 | 0.821590 | 3.723296e-53 | 3.041904e-50 |
| MsG0180000670.01 | MsG0880047703.01 | 0.803939 | 2.743422e-49 | 1.396611e-46 |
| MsG0180000677.01 | MsG0880047703.01 | 0.811204 | 7.869730e-51 | 4.841402e-48 |
| MsG0180000785.01 | MsG0880047703.01 | 0.840301 | 9.440015e-58 | 1.338915e-54 |
| MsG0180000794.01 | MsG0880047703.01 | 0.801633 | 8.213135e-49 | 3.941557e-46 |
| MsG0180001064.01 | MsG0880047703.01 | 0.821351 | 4.228782e-53 | 3.431996e-50 |
| MsG0180001085.01 | MsG0880047703.01 | 0.849719 | 2.700358e-60 | 5.165936e-57 |
| MsG0180001100.01 | MsG0880047703.01 | 0.863508 | 2.367916e-64 | 7.195810e-61 |
| MsG0180001105.01 | MsG0880047703.01 | 0.828504 | 8.667406e-55 | 8.631734e-52 |
| MsG0180001118.01 | MsG0880047703.01 | 0.802114 | 6.542142e-49 | 3.178229e-46 |
| MsG0180001175.01 | MsG0880047703.01 | 0.837429 | 5.226247e-57 | 6.786817e-54 |
| MsG0180001270.01 | MsG0880047703.01 | 0.858345 | 8.780057e-63 | 2.233754e-59 |
| MsG0180001356.01 | MsG0880047703.01 | 0.821790 | 3.348073e-53 | 2.751064e-50 |
| MsG0180001610.01 | MsG0880047703.01 | 0.844020 | 9.790769e-59 | 1.560135e-55 |
| MsG0180001704.01 | MsG0880047703.01 | 0.806596 | 7.619511e-50 | 4.152254e-47 |
| MsG0180002213.01 | MsG0880047703.01 | 0.822977 | 1.774624e-53 | 1.508283e-50 |
| MsG0180002399.01 | MsG0880047703.01 | 0.864781 | 9.498240e-65 | 3.018777e-61 |
| MsG0180002424.01 | MsG0880047703.01 | 0.803519 | 3.354173e-49 | 1.689113e-46 |
| MsG0180002700.01 | MsG0880047703.01 | 0.842842 | 2.020300e-58 | 3.101948e-55 |
| MsG0880043965.01 | MsG0880047703.01 | 0.860355 | 2.188973e-63 | 5.966624e-60 |
| MsG0880044005.01 | MsG0880047703.01 | 0.889745 | 1.839326e-73 | 1.503040e-69 |
| MsG0880044036.01 | MsG0880047703.01 | 0.831463 | 1.645436e-55 | 1.786987e-52 |
| MsG0880044142.01 | MsG0880047703.01 | 0.876970 | 9.142522e-69 | 4.519654e-65 |
| MsG0880044392.01 | MsG0880047703.01 | 0.893840 | 4.317969e-75 | 4.186896e-71 |
| MsG0880044487.01 | MsG0880047703.01 | 0.850449 | 1.685916e-60 | 3.303746e-57 |
| MsG0880044524.01 | MsG0880047703.01 | 0.807150 | 5.818188e-50 | 3.216389e-47 |
| MsG0880044611.01 | MsG0880047703.01 | -0.809580 | 1.763835e-50 | 1.039577e-47 |
| MsG0880044691.01 | MsG0880047703.01 | 0.843589 | 1.276852e-58 | 2.007407e-55 |
| MsG0880044704.01 | MsG0880047703.01 | 0.820046 | 8.435099e-53 | 6.602625e-50 |
| MsG0880044975.01 | MsG0880047703.01 | 0.810712 | 1.005560e-50 | 6.106084e-48 |
| MsG0880044985.01 | MsG0880047703.01 | 0.806599 | 7.606921e-50 | 4.145748e-47 |
| MsG0880045010.01 | MsG0880047703.01 | -0.842926 | 1.918662e-58 | 2.953424e-55 |
| MsG0880045044.01 | MsG0880047703.01 | 0.829171 | 5.975052e-55 | 6.068000e-52 |
| MsG0880045101.01 | MsG0880047703.01 | 0.823309 | 1.484661e-53 | 1.273632e-50 |
| MsG0880045158.01 | MsG0880047703.01 | 0.836250 | 1.044713e-56 | 1.309383e-53 |
| MsG0880045387.01 | MsG0880047703.01 | 0.814006 | 1.919106e-51 | 1.272712e-48 |
| MsG0880045480.01 | MsG0880047703.01 | -0.826005 | 3.439401e-54 | 3.186118e-51 |
| MsG0880045558.01 | MsG0880047703.01 | 0.855725 | 5.203839e-62 | 1.212979e-58 |
| MsG0880045684.01 | MsG0880047703.01 | 0.830121 | 3.509992e-55 | 3.664279e-52 |
| MsG0880045722.01 | MsG0880047703.01 | 0.810267 | 1.254742e-50 | 7.529326e-48 |
| MsG0880045765.01 | MsG0880047703.01 | 0.801327 | 9.485726e-49 | 4.517451e-46 |
| MsG0880045992.01 | MsG0880047703.01 | 0.830663 | 2.586499e-55 | 2.743154e-52 |
| MsG0880046054.01 | MsG0880047703.01 | 0.828521 | 8.583868e-55 | 8.552947e-52 |
| MsG0880046382.01 | MsG0880047703.01 | 0.867596 | 1.218416e-65 | 4.277768e-62 |
| MsG0880046517.01 | MsG0880047703.01 | 0.888295 | 6.704197e-73 | 5.164471e-69 |
| MsG0880046736.01 | MsG0880047703.01 | 0.817080 | 3.969964e-52 | 2.862882e-49 |
| MsG0880046765.01 | MsG0880047703.01 | 0.878109 | 3.662027e-69 | 1.888180e-65 |
| MsG0880046791.01 | MsG0880047703.01 | 0.809542 | 1.796958e-50 | 1.058001e-47 |
| MsG0880046867.01 | MsG0880047703.01 | 0.915071 | 9.095885e-85 | 2.335121e-80 |
| MsG0880046963.01 | MsG0880047703.01 | -0.806399 | 8.385100e-50 | 4.546487e-47 |
| MsG0880047046.01 | MsG0880047703.01 | 0.827464 | 1.542526e-54 | 1.490353e-51 |
| MsG0880047152.01 | MsG0880047703.01 | 0.834511 | 2.873261e-56 | 3.417456e-53 |
| MsG0880047168.01 | MsG0880047703.01 | 0.800472 | 1.418577e-48 | 6.610762e-46 |
| MsG0880047267.01 | MsG0880047703.01 | 0.807281 | 5.457786e-50 | 3.027589e-47 |
| MsG0880047394.01 | MsG0880047703.01 | 0.833742 | 4.478133e-56 | 5.204173e-53 |
| MsG0880047422.01 | MsG0880047703.01 | -0.894983 | 1.475614e-75 | 1.501562e-71 |
| MsG0880047442.01 | MsG0880047703.01 | 0.841006 | 6.172257e-58 | 8.947340e-55 |
| MsG0880047451.01 | MsG0880047703.01 | 0.804092 | 2.550319e-49 | 1.303329e-46 |
| MsG0880047481.01 | MsG0880047703.01 | -0.830938 | 2.215381e-55 | 2.368746e-52 |
| MsG0880047519.01 | MsG0880047703.01 | 0.826110 | 3.247007e-54 | 3.016771e-51 |
| MsG0880047538.01 | MsG0880047703.01 | 0.842721 | 2.175339e-58 | 3.327159e-55 |
| MsG0880047656.01 | MsG0880047703.01 | 0.862813 | 3.885055e-64 | 1.153021e-60 |
| MsG0880047696.01 | MsG0880047703.01 | 0.895561 | 8.523783e-76 | 8.890171e-72 |
| MsG0880047703.01 | MsG0880047754.01 | 0.827172 | 1.811796e-54 | 1.735622e-51 |
| MsG0880047703.01 | MsG0880047770.01 | 0.804539 | 2.057476e-49 | 1.063587e-46 |
| MsG0180003246.01 | MsG0880047703.01 | -0.831799 | 1.359838e-55 | 1.491755e-52 |
| MsG0180003353.01 | MsG0880047703.01 | 0.916645 | 1.388472e-85 | 3.853685e-81 |
| MsG0180003633.01 | MsG0880047703.01 | 0.808518 | 2.977359e-50 | 1.705961e-47 |
| MsG0180003697.01 | MsG0880047703.01 | 0.823931 | 1.061924e-53 | 9.272065e-51 |
| MsG0180003767.01 | MsG0880047703.01 | -0.823990 | 1.028367e-53 | 8.993518e-51 |
| MsG0180003821.01 | MsG0880047703.01 | 0.913013 | 1.005474e-83 | 2.328482e-79 |
| MsG0180003885.01 | MsG0880047703.01 | 0.881568 | 2.154244e-70 | 1.268604e-66 |
| MsG0180003932.01 | MsG0880047703.01 | 0.802881 | 4.545479e-49 | 2.251873e-46 |
| MsG0180003942.01 | MsG0880047703.01 | -0.814367 | 1.597429e-51 | 1.069801e-48 |
| MsG0180004025.01 | MsG0880047703.01 | 0.813166 | 2.936424e-51 | 1.903335e-48 |
| MsG0180004046.01 | MsG0880047703.01 | 0.834640 | 2.666745e-56 | 3.183780e-53 |
| MsG0180004051.01 | MsG0880047703.01 | 0.800904 | 1.157646e-48 | 5.454807e-46 |
| MsG0180004103.01 | MsG0880047703.01 | 0.867571 | 1.240656e-65 | 4.352458e-62 |
| MsG0180004115.01 | MsG0880047703.01 | 0.824535 | 7.660301e-54 | 6.804245e-51 |
| MsG0180004192.01 | MsG0880047703.01 | 0.860042 | 2.721908e-63 | 7.340434e-60 |
| MsG0180004246.01 | MsG0880047703.01 | 0.831972 | 1.232537e-55 | 1.358931e-52 |
| MsG0180004276.01 | MsG0880047703.01 | 0.908581 | 1.462172e-81 | 2.729938e-77 |
| MsG0180004428.01 | MsG0880047703.01 | 0.854648 | 1.069927e-61 | 2.406234e-58 |
| MsG0180004448.01 | MsG0880047703.01 | 0.894549 | 2.221454e-75 | 2.218509e-71 |
| MsG0180004466.01 | MsG0880047703.01 | 0.869002 | 4.288510e-66 | 1.583665e-62 |
| MsG0180004493.01 | MsG0880047703.01 | 0.913663 | 4.737754e-84 | 1.132947e-79 |
| MsG0180004500.01 | MsG0880047703.01 | 0.828987 | 6.620682e-55 | 6.686218e-52 |
| MsG0180004518.01 | MsG0880047703.01 | 0.808525 | 2.967996e-50 | 1.700922e-47 |
| MsG0180004541.01 | MsG0880047703.01 | 0.845459 | 4.008774e-59 | 6.684894e-56 |
| MsG0180004605.01 | MsG0880047703.01 | -0.888581 | 5.201625e-73 | 4.053425e-69 |
| MsG0180004735.01 | MsG0880047703.01 | 0.847598 | 1.044843e-59 | 1.866676e-56 |
| MsG0180004750.01 | MsG0880047703.01 | 0.846605 | 1.955002e-59 | 3.383376e-56 |
| MsG0180004759.01 | MsG0880047703.01 | -0.851531 | 8.353341e-61 | 1.695821e-57 |
| MsG0180004934.01 | MsG0880047703.01 | 0.812930 | 3.308074e-51 | 2.130708e-48 |
| MsG0180004954.01 | MsG0880047703.01 | -0.805386 | 1.368910e-49 | 7.232388e-47 |
| MsG0180005039.01 | MsG0880047703.01 | 0.801231 | 9.927547e-49 | 4.716359e-46 |
| MsG0180005169.01 | MsG0880047703.01 | 0.866328 | 3.088795e-65 | 1.037085e-61 |
| MsG0180005303.01 | MsG0880047703.01 | -0.805778 | 1.132879e-49 | 6.046315e-47 |
| MsG0180005349.01 | MsG0880047703.01 | 0.825500 | 4.532726e-54 | 4.138626e-51 |
| MsG0180005391.01 | MsG0880047703.01 | 0.805994 | 1.020109e-49 | 5.474811e-47 |
| MsG0180005395.01 | MsG0880047703.01 | -0.824443 | 8.049495e-54 | 7.130576e-51 |
| MsG0180005397.01 | MsG0880047703.01 | 0.853924 | 1.732021e-61 | 3.803301e-58 |
| MsG0180005418.01 | MsG0880047703.01 | 0.828746 | 7.573467e-55 | 7.594754e-52 |
| MsG0180005429.01 | MsG0880047703.01 | 0.810232 | 1.276712e-50 | 7.654016e-48 |
| MsG0180005509.01 | MsG0880047703.01 | 0.818052 | 2.397149e-52 | 1.775282e-49 |
| MsG0180005750.01 | MsG0880047703.01 | 0.839123 | 1.913142e-57 | 2.616299e-54 |
| MsG0180005787.01 | MsG0880047703.01 | 0.813542 | 2.428433e-51 | 1.590393e-48 |
| MsG0180005807.01 | MsG0880047703.01 | 0.857369 | 1.710901e-62 | 4.212835e-59 |
| MsG0180005871.01 | MsG0880047703.01 | -0.810630 | 1.047733e-50 | 6.348039e-48 |
| MsG0180005913.01 | MsG0880047703.01 | 0.816019 | 6.862052e-52 | 4.807055e-49 |
| MsG0180005961.01 | MsG0880047703.01 | 0.829026 | 6.480469e-55 | 6.552142e-52 |
| MsG0180005964.01 | MsG0880047703.01 | 0.844938 | 5.543889e-59 | 9.092526e-56 |
| MsG0180006017.01 | MsG0880047703.01 | 0.807657 | 4.542618e-50 | 2.544509e-47 |
| MsG0180006031.01 | MsG0880047703.01 | 0.888628 | 4.989186e-73 | 3.895023e-69 |
| MsG0180006096.01 | MsG0880047703.01 | 0.869566 | 2.812713e-66 | 1.060496e-62 |
| MsG0180006104.01 | MsG0880047703.01 | 0.831535 | 1.580123e-55 | 1.719775e-52 |
| MsG0180006136.01 | MsG0880047703.01 | 0.843127 | 1.696317e-58 | 2.627862e-55 |
| MsG0180006243.01 | MsG0880047703.01 | 0.818257 | 2.154274e-52 | 1.604428e-49 |
| MsG0280006306.01 | MsG0880047703.01 | -0.843323 | 1.504128e-58 | 2.345088e-55 |
| MsG0780040277.01 | MsG0880047703.01 | 0.813704 | 2.236419e-51 | 1.471099e-48 |
| MsG0780040284.01 | MsG0880047703.01 | 0.874746 | 5.305360e-68 | 2.415517e-64 |
| MsG0780040388.01 | MsG0880047703.01 | 0.857310 | 1.780464e-62 | 4.375565e-59 |
| MsG0780040430.01 | MsG0880047703.01 | 0.813994 | 1.930476e-51 | 1.279804e-48 |
| MsG0780040443.01 | MsG0880047703.01 | 0.820431 | 6.885023e-53 | 5.446904e-50 |
| MsG0780040566.01 | MsG0880047703.01 | -0.808466 | 3.054745e-50 | 1.747959e-47 |
| MsG0780040763.01 | MsG0880047703.01 | 0.833155 | 6.274509e-56 | 7.165062e-53 |
| MsG0780040825.01 | MsG0880047703.01 | -0.807570 | 4.737771e-50 | 2.647855e-47 |
| MsG0780041091.01 | MsG0880047703.01 | 0.872687 | 2.625703e-67 | 1.109021e-63 |
| MsG0780041138.01 | MsG0880047703.01 | 0.847245 | 1.306615e-59 | 2.308155e-56 |
| MsG0780041302.01 | MsG0880047703.01 | 0.801356 | 9.357285e-49 | 4.459579e-46 |
| MsG0780041387.01 | MsG0880047703.01 | 0.824645 | 7.216470e-54 | 6.430935e-51 |
| MsG0780041391.01 | MsG0880047703.01 | 0.819799 | 9.605806e-53 | 7.467329e-50 |
| MsG0780041435.01 | MsG0880047703.01 | 0.819717 | 1.003186e-52 | 7.780262e-50 |
| MsG0780041440.01 | MsG0880047703.01 | 0.815277 | 1.004109e-51 | 6.892227e-49 |
| MsG0780041482.01 | MsG0880047703.01 | 0.841210 | 5.454195e-58 | 7.956825e-55 |
| MsG0780041634.01 | MsG0880047703.01 | 0.831404 | 1.701924e-55 | 1.844930e-52 |
| MsG0780041673.01 | MsG0880047703.01 | 0.817984 | 2.482873e-52 | 1.835364e-49 |
| MsG0780041729.01 | MsG0880047703.01 | -0.883655 | 3.733193e-71 | 2.388458e-67 |
| MsG0780041747.01 | MsG0880047703.01 | 0.871742 | 5.420965e-67 | 2.210897e-63 |
| MsG0880041947.01 | MsG0880047703.01 | 0.887337 | 1.558798e-72 | 1.154448e-68 |
| MsG0880041954.01 | MsG0880047703.01 | 0.800603 | 1.333942e-48 | 6.237258e-46 |
| MsG0880042022.01 | MsG0880047703.01 | 0.858977 | 5.687531e-63 | 1.478476e-59 |
| MsG0880042033.01 | MsG0880047703.01 | 0.801800 | 7.589170e-49 | 3.657647e-46 |
| MsG0880042044.01 | MsG0880047703.01 | 0.803435 | 3.490184e-49 | 1.753785e-46 |
| MsG0880042062.01 | MsG0880047703.01 | 0.811364 | 7.263403e-51 | 4.487223e-48 |
| MsG0880042134.01 | MsG0880047703.01 | 0.807037 | 6.145482e-50 | 3.387498e-47 |
| MsG0880042857.01 | MsG0880047703.01 | 0.865958 | 4.046446e-65 | 1.340934e-61 |
| MsG0880042890.01 | MsG0880047703.01 | 0.842335 | 2.753797e-58 | 4.162009e-55 |
| MsG0880042987.01 | MsG0880047703.01 | -0.811742 | 6.012627e-51 | 3.751835e-48 |
| MsG0880043024.01 | MsG0880047703.01 | 0.833064 | 6.609600e-56 | 7.527634e-53 |
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| MsG0780039439.01 | MsG0880047703.01 | 0.865110 | 7.489214e-65 | 2.408351e-61 |
| MsG0780039675.01 | MsG0880047703.01 | 0.861243 | 1.176758e-63 | 3.307640e-60 |
| MsG0780039746.01 | MsG0880047703.01 | 0.828807 | 7.320108e-55 | 7.354058e-52 |
| MsG0780039747.01 | MsG0880047703.01 | -0.801486 | 8.800821e-49 | 4.208107e-46 |
| MsG0780039853.01 | MsG0880047703.01 | 0.814070 | 1.857497e-51 | 1.234023e-48 |
| MsG0780039975.01 | MsG0880047703.01 | 0.824036 | 1.003431e-53 | 8.786353e-51 |
| MsG0780039997.01 | MsG0880047703.01 | -0.817713 | 2.859279e-52 | 2.098030e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047703.01.T01 | MTR_4g133070 | 87.248 | 149 | 7 | 3 | 3 | 150 | 4 | 141 | 7.16e-64 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047703.01.T01 | AT5G20130 | 53.153 | 111 | 50 | 1 | 39 | 149 | 35 | 143 | 1.52e-24 | 94.4 |
| MsG0880047703.01.T01 | AT5G20130 | 53.153 | 111 | 50 | 1 | 39 | 149 | 64 | 172 | 6.19e-24 | 93.2 |
Find 39 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGGTTTGGGTGGGGTAGA+TGG | 0.204366 | 8:-89754117 | MsG0880047703.01.T01:CDS |
| CTGGAGGAGGTTGGTTTGGG+TGG | 0.219431 | 8:-89754126 | MsG0880047703.01.T01:CDS |
| GTGCTGGAGGAGGTTGGTTT+GGG | 0.308879 | 8:-89754129 | MsG0880047703.01.T01:CDS |
| GGTGCTGGAGGAGGTTGGTT+TGG | 0.312842 | 8:-89754130 | MsG0880047703.01.T01:CDS |
| TGGAGGAGGTTGGTTTGGGT+GGG | 0.343284 | 8:-89754125 | MsG0880047703.01.T01:CDS |
| GGAGGAGGTTGGTTTGGGTG+GGG | 0.346451 | 8:-89754124 | MsG0880047703.01.T01:CDS |
| TTTGGGTGGGGTAGATGGTT+TGG | 0.362531 | 8:-89754112 | MsG0880047703.01.T01:CDS |
| CGAGCTGCTTAGTCGTCAAT+TGG | 0.372187 | 8:+89755128 | None:intergenic |
| GGAGGTGACAGCGGCGGTGC+TGG | 0.396880 | 8:-89754145 | MsG0880047703.01.T01:CDS |
| AATCAAAAGACGAGAAGAGC+TGG | 0.418830 | 8:-89754173 | MsG0880047703.01.T01:CDS |
| AACGATGGCGTGACCTGATT+AGG | 0.420437 | 8:+89755152 | None:intergenic |
| CAAGCTAGTCTTACTATACT+TGG | 0.438781 | 8:-89754052 | MsG0880047703.01.T01:CDS |
| TCCCGTATTCAATCCTAATC+AGG | 0.439070 | 8:-89755165 | MsG0880047703.01.T01:CDS |
| CGAGAAGAGCTGGGAGGCGG+AGG | 0.440547 | 8:-89754163 | MsG0880047703.01.T01:CDS |
| GACAGCGGCGGTGCTGGAGG+AGG | 0.464114 | 8:-89754139 | MsG0880047703.01.T01:CDS |
| CAAGCTAGAAAAGCATTAGA+AGG | 0.475399 | 8:-89754241 | MsG0880047703.01.T01:CDS |
| GGTGGGGTAGATGGTTTGGC+TGG | 0.477513 | 8:-89754108 | MsG0880047703.01.T01:CDS |
| AGAAAATTGAATTTGACAAG+TGG | 0.484614 | 8:-89754204 | MsG0880047703.01.T01:CDS |
| CAGTATATCCTAGTTGCAAA+AGG | 0.489427 | 8:-89753910 | MsG0880047703.01.T01:CDS |
| TTGAATACGGGACTCCTCCT+AGG | 0.496159 | 8:+89755176 | None:intergenic |
| GACCTGATTAGGATTGAATA+CGG | 0.498106 | 8:+89755163 | None:intergenic |
| GGTGACAGCGGCGGTGCTGG+AGG | 0.514884 | 8:-89754142 | MsG0880047703.01.T01:CDS |
| GAAAATTGAATTTGACAAGT+GGG | 0.514902 | 8:-89754203 | MsG0880047703.01.T01:CDS |
| GAGCTGCTTAGTCGTCAATT+GGG | 0.516872 | 8:+89755129 | None:intergenic |
| AGACGAGAAGAGCTGGGAGG+CGG | 0.517079 | 8:-89754166 | MsG0880047703.01.T01:CDS |
| GCGGCGGTGCTGGAGGAGGT+TGG | 0.517578 | 8:-89754135 | MsG0880047703.01.T01:CDS |
| AGAGGCATGTGAATCTGCTT+CGG | 0.520608 | 8:+89755053 | None:intergenic |
| GCATTAGAAGGTGCATTAAG+TGG | 0.523555 | 8:-89754229 | MsG0880047703.01.T01:CDS |
| CTGGGAGGCGGAGGTGACAG+CGG | 0.571119 | 8:-89754154 | MsG0880047703.01.T01:CDS |
| GGAGGCGGAGGTGACAGCGG+CGG | 0.580483 | 8:-89754151 | MsG0880047703.01.T01:CDS |
| ATCAAAAGACGAGAAGAGCT+GGG | 0.583730 | 8:-89754172 | MsG0880047703.01.T01:CDS |
| CATTAGAAGGTGCATTAAGT+GGG | 0.584288 | 8:-89754228 | MsG0880047703.01.T01:CDS |
| GGAATGGAAATTGTAAACCT+AGG | 0.606359 | 8:-89755193 | MsG0880047703.01.T01:CDS |
| ACCTGATTAGGATTGAATAC+GGG | 0.620878 | 8:+89755164 | None:intergenic |
| GCATGTGAATCTGCTTCGGT+TGG | 0.624681 | 8:+89755057 | None:intergenic |
| ATGGAAATTGTAAACCTAGG+AGG | 0.633667 | 8:-89755190 | MsG0880047703.01.T01:CDS |
| CTCAGACAACAACAAAAGAG+AGG | 0.641852 | 8:-89755029 | MsG0880047703.01.T01:intron |
| TAGTCGTCAATTGGGAACGA+TGG | 0.645640 | 8:+89755137 | None:intergenic |
| AAAAGACGAGAAGAGCTGGG+AGG | 0.769117 | 8:-89754169 | MsG0880047703.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCCATATATTTATTATT+AGG | + | Chr8:89754424-89754443 | None:intergenic | 10.0% |
| !!! | TTTATCTTAATTTATTTTGT+TGG | - | Chr8:89754523-89754542 | MsG0880047703.01.T01:intron | 10.0% |
| !! | AAGTTGTATCTTATTATATT+CGG | + | Chr8:89754366-89754385 | None:intergenic | 15.0% |
| !! | AATTAAATATGTTCTACATT+AGG | + | Chr8:89754552-89754571 | None:intergenic | 15.0% |
| !! | ATTGGAATCATAAATAAATT+AGG | + | Chr8:89754401-89754420 | None:intergenic | 15.0% |
| !! | CAATCCTAATAATAAATATA+TGG | - | Chr8:89754417-89754436 | MsG0880047703.01.T01:intron | 15.0% |
| !! | CATATATTTATTATTAGGAT+TGG | + | Chr8:89754419-89754438 | None:intergenic | 15.0% |
| !! | ACAAAAAATAAAACTGAAGT+TGG | + | Chr8:89754127-89754146 | None:intergenic | 20.0% |
| !! | ATATGCTATTATAAATAGAG+AGG | + | Chr8:89754339-89754358 | None:intergenic | 20.0% |
| !! | CAAAAAATAAAACTGAAGTT+GGG | + | Chr8:89754126-89754145 | None:intergenic | 20.0% |
| !! | CAGTGATAAATTAATTTCTA+TGG | + | Chr8:89754682-89754701 | None:intergenic | 20.0% |
| !! | TGAATGAATGAATATGAAAT+AGG | + | Chr8:89754081-89754100 | None:intergenic | 20.0% |
| ! | AGAAAATTGAATTTGACAAG+TGG | - | Chr8:89754874-89754893 | MsG0880047703.01.T01:intron | 25.0% |
| ! | GAAAATTGAATTTGACAAGT+GGG | - | Chr8:89754875-89754894 | MsG0880047703.01.T01:intron | 25.0% |
| ! | TAAAGAAATGAATTGCTATG+AGG | + | Chr8:89754262-89754281 | None:intergenic | 25.0% |
| ! | TAAATATGTTCTACATTAGG+AGG | + | Chr8:89754549-89754568 | None:intergenic | 25.0% |
| !! | ATAGTCTCTGATCTAATTTT+GGG | - | Chr8:89754641-89754660 | MsG0880047703.01.T01:intron | 25.0% |
| !! | GGTCTAATGATGATAATTTT+TGG | - | Chr8:89754991-89755010 | MsG0880047703.01.T01:intron | 25.0% |
| !! | TATAGTCTCTGATCTAATTT+TGG | - | Chr8:89754640-89754659 | MsG0880047703.01.T01:intron | 25.0% |
| AAATTACTACAATACTCGCT+TGG | + | Chr8:89754212-89754231 | None:intergenic | 30.0% | |
| AATCAACATAGTATGAGAGT+AGG | + | Chr8:89754303-89754322 | None:intergenic | 30.0% | |
| ATACTGCAAATAAAGAGAGA+AGG | + | Chr8:89755154-89755173 | None:intergenic | 30.0% | |
| CAAACAAGTTCAGTTAAGAA+AGG | + | Chr8:89754495-89754514 | None:intergenic | 30.0% | |
| TATAAGTGAATTCTGATTGC+AGG | - | Chr8:89754812-89754831 | MsG0880047703.01.T01:intron | 30.0% | |
| ! | CTTTCTTAACTGAACTTGTT+TGG | - | Chr8:89754493-89754512 | MsG0880047703.01.T01:intron | 30.0% |
| ! | TAATTTGTGGTAGCATTTCA+TGG | - | Chr8:89754226-89754245 | MsG0880047703.01.T01:CDS | 30.0% |
| ! | TAGTCTCTGATCTAATTTTG+GGG | - | Chr8:89754642-89754661 | MsG0880047703.01.T01:intron | 30.0% |
| AATACTCGCTTGGTTATTGT+TGG | + | Chr8:89754202-89754221 | None:intergenic | 35.0% | |
| AATTTGAGAAGTGAGTTCTG+AGG | - | Chr8:89754780-89754799 | MsG0880047703.01.T01:intron | 35.0% | |
| ACCTGATTAGGATTGAATAC+GGG | + | Chr8:89753917-89753936 | None:intergenic | 35.0% | |
| ATGGAAATTGTAAACCTAGG+AGG | - | Chr8:89753888-89753907 | MsG0880047703.01.T01:CDS | 35.0% | |
| CAGTATATCCTAGTTGCAAA+AGG | - | Chr8:89755168-89755187 | MsG0880047703.01.T01:CDS | 35.0% | |
| CATTATAGTCTCAGATATGG+GGG | - | Chr8:89754737-89754756 | MsG0880047703.01.T01:intron | 35.0% | |
| CGCATTATAGTCTCAGATAT+GGG | - | Chr8:89754735-89754754 | MsG0880047703.01.T01:intron | 35.0% | |
| GACCTGATTAGGATTGAATA+CGG | + | Chr8:89753918-89753937 | None:intergenic | 35.0% | |
| GCATTATAGTCTCAGATATG+GGG | - | Chr8:89754736-89754755 | MsG0880047703.01.T01:intron | 35.0% | |
| TGCAATTTACTGTCACACTT+TGG | - | Chr8:89754463-89754482 | MsG0880047703.01.T01:intron | 35.0% | |
| ! | ACTCTTCCGTTGATGAAAAA+TGG | - | Chr8:89753973-89753992 | MsG0880047703.01.T01:intron | 35.0% |
| ! | CATTAGAAGGTGCATTAAGT+GGG | - | Chr8:89754850-89754869 | MsG0880047703.01.T01:intron | 35.0% |
| ! | CCATATCTGAGACTATAATG+CGG | + | Chr8:89754737-89754756 | None:intergenic | 35.0% |
| ! | GCGAGTATTGTAGTAATTTG+TGG | - | Chr8:89754213-89754232 | MsG0880047703.01.T01:CDS | 35.0% |
| ! | TCAAATCACCTTTTGCAACT+AGG | + | Chr8:89755179-89755198 | None:intergenic | 35.0% |
| !! | CAAGCTAGAAAAGCATTAGA+AGG | - | Chr8:89754837-89754856 | MsG0880047703.01.T01:intron | 35.0% |
| !! | CAAGCTAGTCTTACTATACT+TGG | - | Chr8:89755026-89755045 | MsG0880047703.01.T01:intron | 35.0% |
| !!! | TTTTGTTGTTGTCTGAGAAG+AGG | + | Chr8:89754046-89754065 | None:intergenic | 35.0% |
| AATCAAAAGACGAGAAGAGC+TGG | - | Chr8:89754905-89754924 | MsG0880047703.01.T01:intron | 40.0% | |
| AGGGATAAGGCAAATTATGC+AGG | + | Chr8:89754177-89754196 | None:intergenic | 40.0% | |
| ATCAAAAGACGAGAAGAGCT+GGG | - | Chr8:89754906-89754925 | MsG0880047703.01.T01:intron | 40.0% | |
| CAAATTATGCAGGCAGTGAA+AGG | + | Chr8:89754167-89754186 | None:intergenic | 40.0% | |
| CCGCATTATAGTCTCAGATA+TGG | - | Chr8:89754734-89754753 | MsG0880047703.01.T01:intron | 40.0% | |
| CTCAGACAACAACAAAAGAG+AGG | - | Chr8:89754049-89754068 | MsG0880047703.01.T01:CDS | 40.0% | |
| GACAACAACAAAAGAGAGGT+AGG | - | Chr8:89754053-89754072 | MsG0880047703.01.T01:CDS | 40.0% | |
| TCAGATATGGGGGAATTAGT+GGG | - | Chr8:89754747-89754766 | MsG0880047703.01.T01:intron | 40.0% | |
| TCCCGTATTCAATCCTAATC+AGG | - | Chr8:89753913-89753932 | MsG0880047703.01.T01:intron | 40.0% | |
| ! | GCATTAGAAGGTGCATTAAG+TGG | - | Chr8:89754849-89754868 | MsG0880047703.01.T01:intron | 40.0% |
| ! | GTTATTGTTGGCTAGGGATA+AGG | + | Chr8:89754190-89754209 | None:intergenic | 40.0% |
| !! | GCGACTCCATTTTTCATCAA+CGG | + | Chr8:89753982-89754001 | None:intergenic | 40.0% |
| CTCAGATATGGGGGAATTAG+TGG | - | Chr8:89754746-89754765 | MsG0880047703.01.T01:intron | 45.0% | |
| GAGCTGCTTAGTCGTCAATT+GGG | + | Chr8:89753952-89753971 | None:intergenic | 45.0% | |
| TAGTCGTCAATTGGGAACGA+TGG | + | Chr8:89753944-89753963 | None:intergenic | 45.0% | |
| ! | AGAGGCATGTGAATCTGCTT+CGG | + | Chr8:89754028-89754047 | None:intergenic | 45.0% |
| ! | CGCTTGGTTATTGTTGGCTA+GGG | + | Chr8:89754196-89754215 | None:intergenic | 45.0% |
| ! | TCGCTTGGTTATTGTTGGCT+AGG | + | Chr8:89754197-89754216 | None:intergenic | 45.0% |
| AAAAGACGAGAAGAGCTGGG+AGG | - | Chr8:89754909-89754928 | MsG0880047703.01.T01:intron | 50.0% | |
| AACGATGGCGTGACCTGATT+AGG | + | Chr8:89753929-89753948 | None:intergenic | 50.0% | |
| CGAGCTGCTTAGTCGTCAAT+TGG | + | Chr8:89753953-89753972 | None:intergenic | 50.0% | |
| GCATGTGAATCTGCTTCGGT+TGG | + | Chr8:89754024-89754043 | None:intergenic | 50.0% | |
| TTGAATACGGGACTCCTCCT+AGG | + | Chr8:89753905-89753924 | None:intergenic | 50.0% | |
| TTTGGGTGGGGTAGATGGTT+TGG | - | Chr8:89754966-89754985 | MsG0880047703.01.T01:intron | 50.0% | |
| !! | GTGCTGGAGGAGGTTGGTTT+GGG | - | Chr8:89754949-89754968 | MsG0880047703.01.T01:intron | 55.0% |
| !! | GTTGGTTTGGGTGGGGTAGA+TGG | - | Chr8:89754961-89754980 | MsG0880047703.01.T01:intron | 55.0% |
| !! | TGGAGGAGGTTGGTTTGGGT+GGG | - | Chr8:89754953-89754972 | MsG0880047703.01.T01:intron | 55.0% |
| AGACGAGAAGAGCTGGGAGG+CGG | - | Chr8:89754912-89754931 | MsG0880047703.01.T01:intron | 60.0% | |
| ! | GGTGCTGGAGGAGGTTGGTT+TGG | - | Chr8:89754948-89754967 | MsG0880047703.01.T01:intron | 60.0% |
| ! | GGTGGGGTAGATGGTTTGGC+TGG | - | Chr8:89754970-89754989 | MsG0880047703.01.T01:intron | 60.0% |
| !! | CTGGAGGAGGTTGGTTTGGG+TGG | - | Chr8:89754952-89754971 | MsG0880047703.01.T01:intron | 60.0% |
| !! | GGAGGAGGTTGGTTTGGGTG+GGG | - | Chr8:89754954-89754973 | MsG0880047703.01.T01:intron | 60.0% |
| CGAGAAGAGCTGGGAGGCGG+AGG | - | Chr8:89754915-89754934 | MsG0880047703.01.T01:intron | 70.0% | |
| CTGGGAGGCGGAGGTGACAG+CGG | - | Chr8:89754924-89754943 | MsG0880047703.01.T01:intron | 70.0% | |
| GGAGGCGGAGGTGACAGCGG+CGG | - | Chr8:89754927-89754946 | MsG0880047703.01.T01:intron | 75.0% | |
| GGAGGTGACAGCGGCGGTGC+TGG | - | Chr8:89754933-89754952 | MsG0880047703.01.T01:intron | 75.0% | |
| ! | GACAGCGGCGGTGCTGGAGG+AGG | - | Chr8:89754939-89754958 | MsG0880047703.01.T01:intron | 75.0% |
| ! | GCGGCGGTGCTGGAGGAGGT+TGG | - | Chr8:89754943-89754962 | MsG0880047703.01.T01:intron | 75.0% |
| ! | GGTGACAGCGGCGGTGCTGG+AGG | - | Chr8:89754936-89754955 | MsG0880047703.01.T01:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 89753888 | 89755212 | 89753888 | ID=MsG0880047703.01;Name=MsG0880047703.01 |
| Chr8 | mRNA | 89753888 | 89755212 | 89753888 | ID=MsG0880047703.01.T01;Parent=MsG0880047703.01;Name=MsG0880047703.01.T01;_AED=0.35;_eAED=0.36;_QI=0|0|0|1|0|0|3|0|150 |
| Chr8 | exon | 89755030 | 89755212 | 89755030 | ID=MsG0880047703.01.T01:exon:16070;Parent=MsG0880047703.01.T01 |
| Chr8 | exon | 89754039 | 89754266 | 89754039 | ID=MsG0880047703.01.T01:exon:16069;Parent=MsG0880047703.01.T01 |
| Chr8 | exon | 89753888 | 89753929 | 89753888 | ID=MsG0880047703.01.T01:exon:16068;Parent=MsG0880047703.01.T01 |
| Chr8 | CDS | 89755030 | 89755212 | 89755030 | ID=MsG0880047703.01.T01:cds;Parent=MsG0880047703.01.T01 |
| Chr8 | CDS | 89754039 | 89754266 | 89754039 | ID=MsG0880047703.01.T01:cds;Parent=MsG0880047703.01.T01 |
| Chr8 | CDS | 89753888 | 89753929 | 89753888 | ID=MsG0880047703.01.T01:cds;Parent=MsG0880047703.01.T01 |
| Gene Sequence |
| Protein sequence |
