Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017037.01.T01 | XP_013461685.1 | 94.17 | 223 | 13 | 0 | 1 | 223 | 1 | 223 | 5.17E-147 | 418 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017037.01.T01 | Q9FQA3 | 51.351 | 222 | 107 | 1 | 1 | 221 | 1 | 222 | 3.67E-81 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017037.01.T01 | A0A072VC23 | 94.170 | 223 | 13 | 0 | 1 | 223 | 1 | 223 | 2.47e-147 | 418 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048016.01 | MsG0380017037.01 | 0.841890 | 3.610445e-58 | 5.380331e-55 |
| MsG0080048938.01 | MsG0380017037.01 | 0.827209 | 1.775065e-54 | 1.702304e-51 |
| MsG0180000114.01 | MsG0380017037.01 | 0.833411 | 5.415012e-56 | 6.231209e-53 |
| MsG0180000599.01 | MsG0380017037.01 | 0.850624 | 1.505955e-60 | 2.967832e-57 |
| MsG0180000931.01 | MsG0380017037.01 | 0.804467 | 2.130190e-49 | 1.099132e-46 |
| MsG0180000942.01 | MsG0380017037.01 | 0.811207 | 7.857510e-51 | 4.834339e-48 |
| MsG0180000949.01 | MsG0380017037.01 | 0.822685 | 2.074848e-53 | 1.748970e-50 |
| MsG0180000977.01 | MsG0380017037.01 | 0.835406 | 1.709889e-56 | 2.088992e-53 |
| MsG0180001100.01 | MsG0380017037.01 | 0.816962 | 4.220295e-52 | 3.033902e-49 |
| MsG0180001130.01 | MsG0380017037.01 | 0.804075 | 2.570691e-49 | 1.313205e-46 |
| MsG0180003253.01 | MsG0380017037.01 | 0.823607 | 1.264756e-53 | 1.094195e-50 |
| MsG0180003748.01 | MsG0380017037.01 | 0.807879 | 4.074957e-50 | 2.295760e-47 |
| MsG0180004106.01 | MsG0380017037.01 | 0.838009 | 3.709674e-57 | 4.904558e-54 |
| MsG0180004246.01 | MsG0380017037.01 | 0.815533 | 8.803063e-52 | 6.085301e-49 |
| MsG0180005339.01 | MsG0380017037.01 | 0.853767 | 1.922351e-61 | 4.199120e-58 |
| MsG0180005408.01 | MsG0380017037.01 | 0.806516 | 7.920152e-50 | 4.307435e-47 |
| MsG0180005807.01 | MsG0380017037.01 | 0.801994 | 6.923592e-49 | 3.353287e-46 |
| MsG0280011073.01 | MsG0380017037.01 | 0.868333 | 7.061083e-66 | 2.544320e-62 |
| MsG0380011656.01 | MsG0380017037.01 | 0.842106 | 3.166770e-58 | 4.751867e-55 |
| MsG0380011744.01 | MsG0380017037.01 | 0.825802 | 3.842890e-54 | 3.539391e-51 |
| MsG0380012184.01 | MsG0380017037.01 | 0.824261 | 8.884255e-54 | 7.829092e-51 |
| MsG0380012438.01 | MsG0380017037.01 | 0.815630 | 8.380203e-52 | 5.808606e-49 |
| MsG0380013471.01 | MsG0380017037.01 | 0.852651 | 4.013602e-61 | 8.444224e-58 |
| MsG0380014727.01 | MsG0380017037.01 | 0.838963 | 2.103733e-57 | 2.863094e-54 |
| MsG0380014866.01 | MsG0380017037.01 | 0.824128 | 9.545027e-54 | 8.380155e-51 |
| MsG0380015637.01 | MsG0380017037.01 | 0.852829 | 3.570657e-61 | 7.558370e-58 |
| MsG0380015745.01 | MsG0380017037.01 | 0.837899 | 3.958291e-57 | 5.215039e-54 |
| MsG0380015847.01 | MsG0380017037.01 | -0.802369 | 5.798030e-49 | 2.835279e-46 |
| MsG0380016182.01 | MsG0380017037.01 | 0.810928 | 9.030127e-51 | 5.515402e-48 |
| MsG0380016740.01 | MsG0380017037.01 | 0.830764 | 2.443411e-55 | 2.599214e-52 |
| MsG0380017037.01 | MsG0380017085.01 | 0.808322 | 3.278651e-50 | 1.869033e-47 |
| MsG0380017037.01 | MsG0380017338.01 | 0.807342 | 5.296306e-50 | 2.942636e-47 |
| MsG0380017037.01 | MsG0480018345.01 | 0.809808 | 1.575833e-50 | 9.343458e-48 |
| MsG0380017037.01 | MsG0480018847.01 | 0.815155 | 1.068550e-51 | 7.309865e-49 |
| MsG0380017037.01 | MsG0480018848.01 | 0.804176 | 2.449448e-49 | 1.254456e-46 |
| MsG0380017037.01 | MsG0480021207.01 | 0.813234 | 2.837979e-51 | 1.842904e-48 |
| MsG0380017037.01 | MsG0480021564.01 | 0.814615 | 1.407419e-51 | 9.489063e-49 |
| MsG0380017037.01 | MsG0480022155.01 | 0.804717 | 1.889070e-49 | 9.810891e-47 |
| MsG0380017037.01 | MsG0480022162.01 | 0.803152 | 3.995415e-49 | 1.993118e-46 |
| MsG0380017037.01 | MsG0480022239.01 | 0.839992 | 1.136972e-57 | 1.597482e-54 |
| MsG0380017037.01 | MsG0480022245.01 | 0.821315 | 4.310701e-53 | 3.494987e-50 |
| MsG0380017037.01 | MsG0480022535.01 | 0.821068 | 4.914840e-53 | 3.957924e-50 |
| MsG0380017037.01 | MsG0480022537.01 | 0.822825 | 1.925062e-53 | 1.629190e-50 |
| MsG0380017037.01 | MsG0480022617.01 | 0.804217 | 2.401238e-49 | 1.231040e-46 |
| MsG0380017037.01 | MsG0480022918.01 | 0.826034 | 3.385559e-54 | 3.138670e-51 |
| MsG0380017037.01 | MsG0480023641.01 | 0.865443 | 5.882135e-65 | 1.914098e-61 |
| MsG0380017037.01 | MsG0580024471.01 | 0.818071 | 2.373632e-52 | 1.758775e-49 |
| MsG0380017037.01 | MsG0580024597.01 | 0.801147 | 1.032916e-48 | 4.896829e-46 |
| MsG0380017037.01 | MsG0580024598.01 | 0.803016 | 4.263392e-49 | 2.119239e-46 |
| MsG0380017037.01 | MsG0580024601.01 | 0.810870 | 9.296803e-51 | 5.669256e-48 |
| MsG0380017037.01 | MsG0580024775.01 | 0.804853 | 1.769243e-49 | 9.221141e-47 |
| MsG0380017037.01 | MsG0580024829.01 | 0.815421 | 9.327418e-52 | 6.427746e-49 |
| MsG0380017037.01 | MsG0580026067.01 | 0.810508 | 1.112999e-50 | 6.721468e-48 |
| MsG0380017037.01 | MsG0580028179.01 | 0.810964 | 8.868873e-51 | 5.422265e-48 |
| MsG0380017037.01 | MsG0580028429.01 | 0.802979 | 4.338968e-49 | 2.154817e-46 |
| MsG0380017037.01 | MsG0580029799.01 | 0.802929 | 4.442479e-49 | 2.203513e-46 |
| MsG0380017037.01 | MsG0580029912.01 | 0.858705 | 6.858619e-63 | 1.766219e-59 |
| MsG0380017037.01 | MsG0580029914.01 | 0.828473 | 8.818033e-55 | 8.773785e-52 |
| MsG0380017037.01 | MsG0680030549.01 | 0.814141 | 1.792289e-51 | 1.192954e-48 |
| MsG0380017037.01 | MsG0680030680.01 | 0.823192 | 1.581375e-53 | 1.352186e-50 |
| MsG0380017037.01 | MsG0680030838.01 | 0.814611 | 1.410764e-51 | 9.510430e-49 |
| MsG0380017037.01 | MsG0680030905.01 | 0.807730 | 4.382138e-50 | 2.459456e-47 |
| MsG0380017037.01 | MsG0680030964.01 | 0.804232 | 2.384113e-49 | 1.222703e-46 |
| MsG0380017037.01 | MsG0680031562.01 | 0.810483 | 1.127010e-50 | 6.801563e-48 |
| MsG0380017037.01 | MsG0680032254.01 | 0.818456 | 1.942126e-52 | 1.454599e-49 |
| MsG0380017037.01 | MsG0680032413.01 | 0.873216 | 1.745993e-67 | 7.517491e-64 |
| MsG0380017037.01 | MsG0780037330.01 | 0.813070 | 3.083629e-51 | 1.993568e-48 |
| MsG0380017037.01 | MsG0780037399.01 | 0.835522 | 1.597538e-56 | 1.958407e-53 |
| MsG0380017037.01 | MsG0780037701.01 | 0.824997 | 5.958835e-54 | 5.363966e-51 |
| MsG0380017037.01 | MsG0780038833.01 | 0.805512 | 1.287917e-49 | 6.826561e-47 |
| MsG0380017037.01 | MsG0780039336.01 | 0.815807 | 7.649709e-52 | 5.327828e-49 |
| MsG0380017037.01 | MsG0780039438.01 | 0.842408 | 2.633672e-58 | 3.989889e-55 |
| MsG0380017037.01 | MsG0780039711.01 | 0.808109 | 3.639565e-50 | 2.063023e-47 |
| MsG0380017037.01 | MsG0780039964.01 | 0.850716 | 1.418500e-60 | 2.803870e-57 |
| MsG0380017037.01 | MsG0780040794.01 | 0.832714 | 8.075036e-56 | 9.100426e-53 |
| MsG0380017037.01 | MsG0780041159.01 | 0.826896 | 2.108667e-54 | 2.003773e-51 |
| MsG0380017037.01 | MsG0880042035.01 | 0.829021 | 6.497331e-55 | 6.568291e-52 |
| MsG0380017037.01 | MsG0880042081.01 | 0.802763 | 4.806696e-49 | 2.374256e-46 |
| MsG0380017037.01 | MsG0880042084.01 | 0.823556 | 1.299649e-53 | 1.122749e-50 |
| MsG0380017037.01 | MsG0880042086.01 | 0.808838 | 2.544146e-50 | 1.469912e-47 |
| MsG0380017037.01 | MsG0880042256.01 | 0.819045 | 1.427118e-52 | 1.086366e-49 |
| MsG0380017037.01 | MsG0880042416.01 | 0.850645 | 1.485488e-60 | 2.929562e-57 |
| MsG0380017037.01 | MsG0880042417.01 | 0.827411 | 1.587543e-54 | 1.531582e-51 |
| MsG0380017037.01 | MsG0880042558.01 | 0.814745 | 1.317161e-51 | 8.911577e-49 |
| MsG0380017037.01 | MsG0880042622.01 | 0.801192 | 1.010882e-48 | 4.797856e-46 |
| MsG0380017037.01 | MsG0880042948.01 | 0.809768 | 1.607253e-50 | 9.520345e-48 |
| MsG0380017037.01 | MsG0880043107.01 | 0.831575 | 1.544766e-55 | 1.683309e-52 |
| MsG0380017037.01 | MsG0880044105.01 | 0.820992 | 5.115768e-53 | 4.111150e-50 |
| MsG0380017037.01 | MsG0880045190.01 | 0.818748 | 1.667337e-52 | 1.258774e-49 |
| MsG0380017037.01 | MsG0880047152.01 | 0.874338 | 7.303983e-68 | 3.275210e-64 |
| MsG0280006634.01 | MsG0380017037.01 | 0.802573 | 5.262976e-49 | 2.586837e-46 |
| MsG0280006669.01 | MsG0380017037.01 | 0.834884 | 2.315175e-56 | 2.784265e-53 |
| MsG0280008098.01 | MsG0380017037.01 | 0.806750 | 7.066974e-50 | 3.866559e-47 |
| MsG0280008101.01 | MsG0380017037.01 | 0.837245 | 5.825271e-57 | 7.521366e-54 |
| MsG0280008419.01 | MsG0380017037.01 | 0.827721 | 1.337777e-54 | 1.302161e-51 |
| MsG0280008932.01 | MsG0380017037.01 | 0.860325 | 2.234770e-63 | 6.084676e-60 |
| MsG0280009757.01 | MsG0380017037.01 | 0.833700 | 4.588359e-56 | 5.325134e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017037.01.T01 | MTR_3g099757 | 94.170 | 223 | 13 | 0 | 1 | 223 | 1 | 223 | 6.26e-151 | 418 |
| MsG0380017037.01.T01 | MTR_4g019780 | 50.476 | 210 | 104 | 0 | 4 | 213 | 7 | 216 | 1.41e-72 | 220 |
| MsG0380017037.01.T01 | MTR_7g065740 | 48.416 | 221 | 111 | 2 | 4 | 222 | 6 | 225 | 1.44e-71 | 218 |
| MsG0380017037.01.T01 | MTR_8g087425 | 49.772 | 219 | 106 | 1 | 1 | 215 | 1 | 219 | 6.00e-71 | 216 |
| MsG0380017037.01.T01 | MTR_7g065720 | 47.273 | 220 | 113 | 2 | 4 | 221 | 6 | 224 | 3.82e-70 | 214 |
| MsG0380017037.01.T01 | MTR_4g019790 | 46.222 | 225 | 117 | 3 | 1 | 222 | 1 | 224 | 3.87e-70 | 214 |
| MsG0380017037.01.T01 | MTR_7g065600 | 50.228 | 219 | 107 | 2 | 4 | 221 | 6 | 223 | 7.77e-70 | 213 |
| MsG0380017037.01.T01 | MTR_6g080440 | 51.042 | 192 | 94 | 0 | 19 | 210 | 17 | 208 | 1.37e-69 | 213 |
| MsG0380017037.01.T01 | MTR_7g065660 | 48.182 | 220 | 112 | 2 | 4 | 222 | 6 | 224 | 6.16e-69 | 211 |
| MsG0380017037.01.T01 | MTR_7g065590 | 46.847 | 222 | 116 | 2 | 1 | 221 | 3 | 223 | 3.89e-68 | 209 |
| MsG0380017037.01.T01 | MTR_1g090150 | 45.045 | 222 | 119 | 2 | 4 | 223 | 2 | 222 | 1.02e-67 | 207 |
| MsG0380017037.01.T01 | MTR_7g065750 | 47.511 | 221 | 113 | 3 | 4 | 222 | 6 | 225 | 2.03e-67 | 207 |
| MsG0380017037.01.T01 | MTR_8g087410 | 46.635 | 208 | 111 | 0 | 1 | 208 | 2 | 209 | 1.40e-66 | 205 |
| MsG0380017037.01.T01 | MTR_7g065630 | 48.182 | 220 | 108 | 3 | 4 | 222 | 24 | 238 | 1.43e-65 | 202 |
| MsG0380017037.01.T01 | MTR_1g115195 | 49.048 | 210 | 100 | 3 | 6 | 210 | 4 | 211 | 2.03e-65 | 202 |
| MsG0380017037.01.T01 | MTR_1g090060 | 48.309 | 207 | 101 | 4 | 6 | 208 | 4 | 208 | 2.80e-65 | 201 |
| MsG0380017037.01.T01 | MTR_7g065290 | 47.867 | 211 | 108 | 2 | 4 | 213 | 6 | 215 | 4.78e-65 | 201 |
| MsG0380017037.01.T01 | MTR_7g065270 | 48.815 | 211 | 106 | 2 | 4 | 213 | 6 | 215 | 2.85e-64 | 199 |
| MsG0380017037.01.T01 | MTR_1g090070 | 43.891 | 221 | 119 | 3 | 6 | 222 | 10 | 229 | 9.89e-64 | 197 |
| MsG0380017037.01.T01 | MTR_7g065265 | 47.664 | 214 | 106 | 3 | 4 | 216 | 6 | 214 | 5.53e-62 | 193 |
| MsG0380017037.01.T01 | MTR_1g090100 | 43.891 | 221 | 117 | 4 | 5 | 220 | 2 | 220 | 1.20e-61 | 192 |
| MsG0380017037.01.T01 | MTR_7g065710 | 49.010 | 202 | 97 | 3 | 6 | 206 | 5 | 201 | 1.81e-61 | 192 |
| MsG0380017037.01.T01 | MTR_5g040430 | 44.651 | 215 | 113 | 2 | 6 | 214 | 8 | 222 | 2.27e-61 | 191 |
| MsG0380017037.01.T01 | MTR_7g065230 | 47.032 | 219 | 109 | 3 | 4 | 221 | 6 | 218 | 2.67e-61 | 191 |
| MsG0380017037.01.T01 | MTR_4g059730 | 46.047 | 215 | 112 | 3 | 3 | 214 | 2 | 215 | 6.25e-61 | 190 |
| MsG0380017037.01.T01 | MTR_7g065260 | 47.059 | 221 | 112 | 3 | 4 | 223 | 13 | 229 | 2.98e-60 | 189 |
| MsG0380017037.01.T01 | MTR_7g065640 | 43.182 | 220 | 105 | 2 | 4 | 222 | 6 | 206 | 2.75e-59 | 186 |
| MsG0380017037.01.T01 | MTR_7g065680 | 47.273 | 220 | 110 | 3 | 4 | 222 | 6 | 220 | 2.66e-57 | 181 |
| MsG0380017037.01.T01 | MTR_1g090090 | 43.519 | 216 | 114 | 4 | 6 | 218 | 4 | 214 | 4.30e-57 | 181 |
| MsG0380017037.01.T01 | MTR_2g070150 | 44.390 | 205 | 111 | 2 | 3 | 206 | 2 | 204 | 3.58e-56 | 177 |
| MsG0380017037.01.T01 | MTR_7g065700 | 49.510 | 204 | 97 | 3 | 4 | 206 | 6 | 204 | 1.67e-55 | 177 |
| MsG0380017037.01.T01 | MTR_5g037380 | 41.150 | 226 | 125 | 3 | 1 | 218 | 1 | 226 | 1.50e-52 | 169 |
| MsG0380017037.01.T01 | MTR_2g070180 | 41.262 | 206 | 118 | 2 | 3 | 207 | 2 | 205 | 8.94e-52 | 167 |
| MsG0380017037.01.T01 | MTR_2g070200 | 43.810 | 210 | 113 | 5 | 3 | 209 | 2 | 209 | 8.25e-51 | 164 |
| MsG0380017037.01.T01 | MTR_2g070120 | 38.532 | 218 | 128 | 3 | 3 | 216 | 2 | 217 | 9.35e-51 | 164 |
| MsG0380017037.01.T01 | MTR_8g061950 | 41.256 | 223 | 123 | 3 | 1 | 215 | 1 | 223 | 1.69e-50 | 164 |
| MsG0380017037.01.T01 | MTR_2g070140 | 43.979 | 191 | 104 | 2 | 18 | 207 | 1 | 189 | 1.87e-50 | 163 |
| MsG0380017037.01.T01 | MTR_2g070210 | 40.000 | 220 | 125 | 5 | 3 | 218 | 2 | 218 | 2.39e-50 | 163 |
| MsG0380017037.01.T01 | MTR_2g070130 | 40.291 | 206 | 120 | 3 | 3 | 207 | 2 | 205 | 2.63e-49 | 160 |
| MsG0380017037.01.T01 | MTR_4g124130 | 45.161 | 217 | 111 | 7 | 4 | 216 | 3 | 215 | 1.50e-45 | 151 |
| MsG0380017037.01.T01 | MTR_2g070060 | 37.327 | 217 | 133 | 3 | 3 | 218 | 2 | 216 | 2.69e-45 | 150 |
| MsG0380017037.01.T01 | MTR_3g467420 | 45.556 | 180 | 96 | 2 | 2 | 180 | 6 | 184 | 3.61e-45 | 150 |
| MsG0380017037.01.T01 | MTR_3g467430 | 47.561 | 164 | 85 | 1 | 1 | 163 | 5 | 168 | 6.61e-45 | 149 |
| MsG0380017037.01.T01 | MTR_8g056940 | 47.531 | 162 | 84 | 1 | 3 | 163 | 2 | 163 | 4.62e-44 | 147 |
| MsG0380017037.01.T01 | MTR_5g076900 | 37.037 | 216 | 133 | 2 | 3 | 217 | 4 | 217 | 1.17e-40 | 139 |
| MsG0380017037.01.T01 | MTR_2g070070 | 37.788 | 217 | 132 | 3 | 3 | 218 | 2 | 216 | 4.94e-40 | 137 |
| MsG0380017037.01.T01 | MTR_2g070110 | 37.788 | 217 | 131 | 4 | 3 | 218 | 2 | 215 | 5.13e-37 | 129 |
| MsG0380017037.01.T01 | MTR_0186s0030 | 47.101 | 138 | 72 | 1 | 3 | 139 | 2 | 139 | 6.51e-37 | 126 |
| MsG0380017037.01.T01 | MTR_2g072120 | 50.000 | 58 | 28 | 1 | 49 | 105 | 2 | 59 | 3.76e-17 | 73.6 |
| MsG0380017037.01.T01 | MTR_5g037390 | 39.726 | 73 | 41 | 1 | 29 | 98 | 11 | 83 | 1.63e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017037.01.T01 | AT2G29420 | 43.891 | 221 | 124 | 0 | 3 | 223 | 7 | 227 | 3.25e-67 | 206 |
| MsG0380017037.01.T01 | AT3G09270 | 46.818 | 220 | 115 | 2 | 4 | 221 | 5 | 224 | 3.37e-67 | 206 |
| MsG0380017037.01.T01 | AT2G29460 | 44.749 | 219 | 120 | 1 | 4 | 221 | 6 | 224 | 2.61e-63 | 196 |
| MsG0380017037.01.T01 | AT2G29480 | 45.238 | 210 | 114 | 1 | 4 | 212 | 6 | 215 | 5.30e-62 | 193 |
| MsG0380017037.01.T01 | AT2G29490 | 42.009 | 219 | 126 | 1 | 4 | 221 | 6 | 224 | 3.50e-60 | 189 |
| MsG0380017037.01.T01 | AT2G29470 | 43.541 | 209 | 116 | 2 | 4 | 210 | 6 | 214 | 7.50e-59 | 185 |
| MsG0380017037.01.T01 | AT2G29450 | 41.818 | 220 | 126 | 2 | 4 | 221 | 5 | 224 | 9.66e-58 | 182 |
| MsG0380017037.01.T01 | AT2G29440 | 40.000 | 220 | 131 | 1 | 3 | 221 | 4 | 223 | 1.30e-57 | 182 |
| MsG0380017037.01.T01 | AT1G10370 | 41.364 | 220 | 120 | 4 | 1 | 212 | 1 | 219 | 5.98e-53 | 170 |
| MsG0380017037.01.T01 | AT1G78370 | 43.333 | 210 | 116 | 3 | 8 | 216 | 7 | 214 | 1.17e-52 | 169 |
| MsG0380017037.01.T01 | AT1G78340 | 45.977 | 174 | 93 | 1 | 3 | 175 | 2 | 175 | 7.52e-52 | 167 |
| MsG0380017037.01.T01 | AT1G78320 | 40.553 | 217 | 124 | 4 | 4 | 218 | 3 | 216 | 1.76e-51 | 166 |
| MsG0380017037.01.T01 | AT5G62480 | 38.053 | 226 | 131 | 2 | 4 | 220 | 7 | 232 | 2.10e-50 | 164 |
| MsG0380017037.01.T01 | AT1G78380 | 40.465 | 215 | 125 | 3 | 3 | 216 | 2 | 214 | 7.60e-50 | 162 |
| MsG0380017037.01.T01 | AT1G17170 | 43.478 | 207 | 113 | 4 | 3 | 208 | 2 | 205 | 9.78e-50 | 162 |
| MsG0380017037.01.T01 | AT1G74590 | 38.767 | 227 | 126 | 4 | 6 | 223 | 8 | 230 | 1.24e-49 | 162 |
| MsG0380017037.01.T01 | AT1G59670 | 40.455 | 220 | 123 | 4 | 4 | 215 | 5 | 224 | 2.47e-48 | 159 |
| MsG0380017037.01.T01 | AT1G17190 | 39.631 | 217 | 128 | 3 | 1 | 216 | 1 | 215 | 4.85e-48 | 157 |
| MsG0380017037.01.T01 | AT1G59700 | 42.523 | 214 | 115 | 4 | 4 | 209 | 5 | 218 | 4.97e-48 | 158 |
| MsG0380017037.01.T01 | AT1G10360 | 36.530 | 219 | 132 | 3 | 1 | 212 | 1 | 219 | 1.09e-47 | 157 |
| MsG0380017037.01.T01 | AT1G17180 | 39.908 | 218 | 126 | 4 | 3 | 218 | 2 | 216 | 9.79e-47 | 154 |
| MsG0380017037.01.T01 | AT1G69930 | 40.376 | 213 | 121 | 3 | 6 | 212 | 13 | 225 | 2.43e-46 | 154 |
| MsG0380017037.01.T01 | AT3G43800 | 39.640 | 222 | 127 | 4 | 1 | 217 | 1 | 220 | 7.87e-45 | 149 |
| MsG0380017037.01.T01 | AT1G27130 | 39.450 | 218 | 124 | 4 | 3 | 212 | 4 | 221 | 9.98e-45 | 149 |
| MsG0380017037.01.T01 | AT1G53680 | 45.238 | 168 | 89 | 2 | 6 | 170 | 8 | 175 | 1.32e-42 | 144 |
| MsG0380017037.01.T01 | AT1G78360 | 47.500 | 160 | 81 | 3 | 6 | 162 | 5 | 164 | 1.87e-42 | 143 |
| MsG0380017037.01.T01 | AT1G69920 | 38.889 | 216 | 124 | 4 | 5 | 212 | 34 | 249 | 1.84e-40 | 139 |
| MsG0380017037.01.T01 | AT1G27140 | 37.037 | 216 | 127 | 4 | 3 | 209 | 4 | 219 | 9.53e-38 | 132 |
| MsG0380017037.01.T01 | AT1G78320 | 34.722 | 216 | 111 | 4 | 4 | 218 | 3 | 189 | 2.04e-35 | 124 |
| MsG0380017037.01.T01 | AT5G62480 | 31.111 | 225 | 122 | 2 | 4 | 220 | 7 | 206 | 1.02e-33 | 120 |
| MsG0380017037.01.T01 | AT5G62480 | 31.111 | 225 | 121 | 2 | 4 | 220 | 7 | 205 | 1.24e-33 | 120 |
Find 64 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCACGTTACTAGGGTTC+TGG | 0.230426 | 3:-91053796 | MsG0380017037.01.T01:CDS |
| AGAGGGCCAAGGCGCGATTT+TGG | 0.235373 | 3:-91053538 | MsG0380017037.01.T01:CDS |
| TAAAATCTTCTTCAACATAT+TGG | 0.276929 | 3:+91053717 | None:intergenic |
| TCGCGCCTTGGCCCTCTCAT+AGG | 0.290203 | 3:+91053544 | None:intergenic |
| AAGTGGGCTCTTGAACTAAA+AGG | 0.296086 | 3:-91053749 | MsG0380017037.01.T01:CDS |
| ATTAACATATTGCATGATAT+TGG | 0.298727 | 3:+91052709 | None:intergenic |
| TGATGTGTGTGTATGATATA+TGG | 0.313334 | 3:-91052742 | MsG0380017037.01.T01:three_prime_UTR |
| GGAGACTCACTCACGTTACT+AGG | 0.328682 | 3:-91053803 | MsG0380017037.01.T01:CDS |
| GAGCTCAGGTTCGTGTTTAT+AGG | 0.355178 | 3:+91052641 | None:intergenic |
| GACATCTTCATCAGCTTAAG+AGG | 0.360365 | 3:-91052824 | MsG0380017037.01.T01:exon |
| GGCGTGCATTCTTTGATAAC+AGG | 0.364374 | 3:+91052895 | None:intergenic |
| TGTGTTTACATGATTAGTTT+AGG | 0.367219 | 3:+91052615 | None:intergenic |
| AATCACTAGTGATTCTGATA+TGG | 0.369693 | 3:+91053619 | None:intergenic |
| ACAGGTACCTTCTTATAAAC+AGG | 0.378107 | 3:+91053662 | None:intergenic |
| GGCTTTGCTGATATTGCTGT+TGG | 0.390337 | 3:-91053027 | MsG0380017037.01.T01:CDS |
| TTCCCTCAAGTCCACTTTCA+AGG | 0.391350 | 3:+91053076 | None:intergenic |
| CACTTGACCCTCAGGACAAA+TGG | 0.402811 | 3:+91053767 | None:intergenic |
| GGCTAAATTCGCCGATGATA+AGG | 0.406052 | 3:-91053516 | MsG0380017037.01.T01:intron |
| ATCCTTGAAAGTGGACTTGA+GGG | 0.416245 | 3:-91053078 | MsG0380017037.01.T01:CDS |
| CCATGGACTCTGTATCAATC+AGG | 0.416951 | 3:+91052956 | None:intergenic |
| CTTGAGGGAAGGCGCTACTT+TGG | 0.416974 | 3:-91053063 | MsG0380017037.01.T01:CDS |
| TAGAGTATGTTGATGAGATC+TGG | 0.424571 | 3:-91053595 | MsG0380017037.01.T01:CDS |
| TACTTTGGAGGTGAAAATAT+AGG | 0.440103 | 3:-91053048 | MsG0380017037.01.T01:CDS |
| TATAACATATTGTATTGTAT+AGG | 0.463518 | 3:+91052791 | None:intergenic |
| TTACCGTCATGCACAAGAAC+AGG | 0.465185 | 3:+91053644 | None:intergenic |
| CGCGCCTTGGCCCTCTCATA+GGG | 0.469964 | 3:+91053545 | None:intergenic |
| AGTGGGCTCTTGAACTAAAA+GGG | 0.471204 | 3:-91053748 | MsG0380017037.01.T01:CDS |
| ACTCACGTTACTAGGGTTCT+GGG | 0.475091 | 3:-91053795 | MsG0380017037.01.T01:CDS |
| GAGGGAAGGCGCTACTTTGG+AGG | 0.487384 | 3:-91053060 | MsG0380017037.01.T01:CDS |
| GATGTGTGTGTATGATATAT+GGG | 0.488055 | 3:-91052741 | MsG0380017037.01.T01:three_prime_UTR |
| GCTTTGCTGATATTGCTGTT+GGG | 0.489214 | 3:-91053026 | MsG0380017037.01.T01:CDS |
| CAAGAGCCCACTTGACCCTC+AGG | 0.492284 | 3:+91053759 | None:intergenic |
| ATTAGTTTAGGTTTGAGCTC+AGG | 0.493653 | 3:+91052627 | None:intergenic |
| GGGTAGTCCATTTGTCCTGA+GGG | 0.524592 | 3:-91053774 | MsG0380017037.01.T01:CDS |
| CCTGATTGATACAGAGTCCA+TGG | 0.533258 | 3:-91052956 | MsG0380017037.01.T01:CDS |
| AATTTGAAGATCCTTGAAAG+TGG | 0.535582 | 3:-91053087 | MsG0380017037.01.T01:CDS |
| GGGGTAGTCCATTTGTCCTG+AGG | 0.544193 | 3:-91053775 | MsG0380017037.01.T01:CDS |
| GTATAATCCTGTTTATAAGA+AGG | 0.544339 | 3:-91053669 | MsG0380017037.01.T01:CDS |
| TTTAGCCCAAAATCGCGCCT+TGG | 0.545817 | 3:+91053532 | None:intergenic |
| AAGAAAGTCATCGAAGTAAG+TGG | 0.546614 | 3:+91052924 | None:intergenic |
| CATTTGTCCTGAGGGTCAAG+TGG | 0.551709 | 3:-91053766 | MsG0380017037.01.T01:CDS |
| AACTAGGAATGAGAAAGAGC+AGG | 0.568013 | 3:-91053851 | None:intergenic |
| ATTTGTCCTGAGGGTCAAGT+GGG | 0.573803 | 3:-91053765 | MsG0380017037.01.T01:CDS |
| GCCCTCTCATAGGGATCATG+TGG | 0.575393 | 3:+91053554 | None:intergenic |
| TAGGGATCATGTGGAAGAAG+AGG | 0.575719 | 3:+91053563 | None:intergenic |
| GAGACTCACTCACGTTACTA+GGG | 0.583299 | 3:-91053802 | MsG0380017037.01.T01:CDS |
| GATCCTTGAAAGTGGACTTG+AGG | 0.587591 | 3:-91053079 | MsG0380017037.01.T01:CDS |
| GTAAGTGGTAAGTTTAGCCA+TGG | 0.594981 | 3:+91052939 | None:intergenic |
| AATAGGAGAGGAACAACAGA+AGG | 0.601970 | 3:-91053130 | MsG0380017037.01.T01:CDS |
| TCCACATGATCCCTATGAGA+GGG | 0.621697 | 3:-91053555 | MsG0380017037.01.T01:CDS |
| ATGAAGATGTCAAGACCTTG+TGG | 0.622264 | 3:+91052836 | None:intergenic |
| CATATTGTATTGTATAGGTG+TGG | 0.627030 | 3:+91052796 | None:intergenic |
| GTGGGCTCTTGAACTAAAAG+GGG | 0.630143 | 3:-91053747 | MsG0380017037.01.T01:CDS |
| TTCCACATGATCCCTATGAG+AGG | 0.630417 | 3:-91053556 | MsG0380017037.01.T01:CDS |
| TTGAAAGTGGACTTGAGGGA+AGG | 0.636293 | 3:-91053074 | MsG0380017037.01.T01:CDS |
| GCACAGCAAGGCCTTCCACA+AGG | 0.644456 | 3:-91052851 | MsG0380017037.01.T01:CDS |
| AGATGTCAAGACCTTGTGGA+AGG | 0.645290 | 3:+91052840 | None:intergenic |
| CTCACGTTACTAGGGTTCTG+GGG | 0.648274 | 3:-91053794 | MsG0380017037.01.T01:CDS |
| TCAAGTAACTTATCATGAGA+CGG | 0.652385 | 3:+91052874 | None:intergenic |
| TGATCCCTATGAGAGGGCCA+AGG | 0.658261 | 3:-91053549 | MsG0380017037.01.T01:CDS |
| TAAGTTACTTGAGCACAGCA+AGG | 0.675812 | 3:-91052863 | MsG0380017037.01.T01:CDS |
| GTACCTGTTCTTGTGCATGA+CGG | 0.690851 | 3:-91053647 | MsG0380017037.01.T01:CDS |
| CGAGTGATAGAAGAAACTGT+AGG | 0.708991 | 3:-91052985 | MsG0380017037.01.T01:CDS |
| TGTGTGTATGATAATATGCG+TGG | 0.738199 | 3:-91052671 | MsG0380017037.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAACATATTGTATTGTAT+AGG | + | Chr3:91053641-91053660 | None:intergenic | 15.0% |
| !! | ATTAACATATTGCATGATAT+TGG | + | Chr3:91053723-91053742 | None:intergenic | 20.0% |
| !! | TAAAATCTTCTTCAACATAT+TGG | + | Chr3:91052715-91052734 | None:intergenic | 20.0% |
| !! | TGTTTGATTAAAAGCAAAAA+TGG | - | Chr3:91052601-91052620 | MsG0380017037.01.T01:three_prime_UTR | 20.0% |
| !!! | AATATGTTGAAGAAGATTTT+AGG | - | Chr3:91052714-91052733 | MsG0380017037.01.T01:three_prime_UTR | 20.0% |
| !!! | CTTTTGAGTAATAGTTTAAT+TGG | + | Chr3:91053096-91053115 | None:intergenic | 20.0% |
| ! | GTATAATCCTGTTTATAAGA+AGG | - | Chr3:91052760-91052779 | MsG0380017037.01.T01:three_prime_UTR | 25.0% |
| !!! | ATAGCTACCTTTTTCAAAAT+AGG | - | Chr3:91053282-91053301 | MsG0380017037.01.T01:intron | 25.0% |
| !!! | TGTGTTTACATGATTAGTTT+AGG | + | Chr3:91053817-91053836 | None:intergenic | 25.0% |
| AAAAAGGTAGCTATAAATGC+TGG | + | Chr3:91053276-91053295 | None:intergenic | 30.0% | |
| AATCACTAGTGATTCTGATA+TGG | + | Chr3:91052813-91052832 | None:intergenic | 30.0% | |
| AATTTGAAGATCCTTGAAAG+TGG | - | Chr3:91053342-91053361 | MsG0380017037.01.T01:intron | 30.0% | |
| CATATTGTATTGTATAGGTG+TGG | + | Chr3:91053636-91053655 | None:intergenic | 30.0% | |
| GATGTGTGTGTATGATATAT+GGG | - | Chr3:91053688-91053707 | MsG0380017037.01.T01:CDS | 30.0% | |
| TCAAGTAACTTATCATGAGA+CGG | + | Chr3:91053558-91053577 | None:intergenic | 30.0% | |
| TGATGTGTGTGTATGATATA+TGG | - | Chr3:91053687-91053706 | MsG0380017037.01.T01:CDS | 30.0% | |
| TGATTAAAAGCAAAAATGGC+AGG | - | Chr3:91052605-91052624 | MsG0380017037.01.T01:three_prime_UTR | 30.0% | |
| ! | ATCATGTTCTTTAGAAGTCA+TGG | + | Chr3:91052947-91052966 | None:intergenic | 30.0% |
| ! | TACTTTGGAGGTGAAAATAT+AGG | - | Chr3:91053381-91053400 | MsG0380017037.01.T01:intron | 30.0% |
| ! | TGGCTTTTATACCTTATCAT+CGG | + | Chr3:91052927-91052946 | None:intergenic | 30.0% |
| !! | TTCCTCTCCTATTTTGAAAA+AGG | + | Chr3:91053292-91053311 | None:intergenic | 30.0% |
| !!! | AAGGTTGGTTTTTGTATTAG+AGG | + | Chr3:91053236-91053255 | None:intergenic | 30.0% |
| !!! | TACCTTTTTCAAAATAGGAG+AGG | - | Chr3:91053287-91053306 | MsG0380017037.01.T01:intron | 30.0% |
| AAGAAAGTCATCGAAGTAAG+TGG | + | Chr3:91053508-91053527 | None:intergenic | 35.0% | |
| ACAGGTACCTTCTTATAAAC+AGG | + | Chr3:91052770-91052789 | None:intergenic | 35.0% | |
| CACACTGAAATAGAAAAGGT+TGG | + | Chr3:91053251-91053270 | None:intergenic | 35.0% | |
| GATCAAACCAAACATCAAGT+TGG | + | Chr3:91053003-91053022 | None:intergenic | 35.0% | |
| TGTGTGTATGATAATATGCG+TGG | - | Chr3:91053758-91053777 | MsG0380017037.01.T01:CDS | 35.0% | |
| ! | ATTAGTTTAGGTTTGAGCTC+AGG | + | Chr3:91053805-91053824 | None:intergenic | 35.0% |
| ! | TAGAGTATGTTGATGAGATC+TGG | - | Chr3:91052834-91052853 | MsG0380017037.01.T01:CDS | 35.0% |
| !! | TTGGTTTTTGTATTAGAGGC+TGG | + | Chr3:91053232-91053251 | None:intergenic | 35.0% |
| !!! | GATATTGCTGTTGGGTTTTT+TGG | - | Chr3:91053411-91053430 | MsG0380017037.01.T01:intron | 35.0% |
| !!! | TGTTGGGTTTTTTGGATTCT+GGG | - | Chr3:91053419-91053438 | MsG0380017037.01.T01:intron | 35.0% |
| AAGAACATGATCAAACCGTC+TGG | - | Chr3:91052956-91052975 | MsG0380017037.01.T01:CDS | 40.0% | |
| AATAGGAGAGGAACAACAGA+AGG | - | Chr3:91053299-91053318 | MsG0380017037.01.T01:intron | 40.0% | |
| AGTCTCAACATTTCGATCTC+TGG | - | Chr3:91053114-91053133 | MsG0380017037.01.T01:CDS | 40.0% | |
| ATGAAGATGTCAAGACCTTG+TGG | + | Chr3:91053596-91053615 | None:intergenic | 40.0% | |
| CCAGAAACCAACTTGATGTT+TGG | - | Chr3:91052993-91053012 | MsG0380017037.01.T01:CDS | 40.0% | |
| CGAGTGATAGAAGAAACTGT+AGG | - | Chr3:91053444-91053463 | MsG0380017037.01.T01:intron | 40.0% | |
| GACATCTTCATCAGCTTAAG+AGG | - | Chr3:91053605-91053624 | MsG0380017037.01.T01:CDS | 40.0% | |
| GGCACACACTGAAATAGAAA+AGG | + | Chr3:91053255-91053274 | None:intergenic | 40.0% | |
| GTAAGTGGTAAGTTTAGCCA+TGG | + | Chr3:91053493-91053512 | None:intergenic | 40.0% | |
| GTTCAACCATTTGAACCAGA+CGG | + | Chr3:91052974-91052993 | None:intergenic | 40.0% | |
| TAAGTTACTTGAGCACAGCA+AGG | - | Chr3:91053566-91053585 | MsG0380017037.01.T01:CDS | 40.0% | |
| ! | AAGTGGGCTCTTGAACTAAA+AGG | - | Chr3:91052680-91052699 | MsG0380017037.01.T01:three_prime_UTR | 40.0% |
| ! | AGTGGGCTCTTGAACTAAAA+GGG | - | Chr3:91052681-91052700 | MsG0380017037.01.T01:three_prime_UTR | 40.0% |
| ! | ATCAAACCGTCTGGTTCAAA+TGG | - | Chr3:91052965-91052984 | MsG0380017037.01.T01:CDS | 40.0% |
| ! | ATCCTTGAAAGTGGACTTGA+GGG | - | Chr3:91053351-91053370 | MsG0380017037.01.T01:intron | 40.0% |
| ! | GCTTTGCTGATATTGCTGTT+GGG | - | Chr3:91053403-91053422 | MsG0380017037.01.T01:intron | 40.0% |
| !! | CCAAACATCAAGTTGGTTTC+TGG | + | Chr3:91052996-91053015 | None:intergenic | 40.0% |
| !!! | CTGTTGGGTTTTTTGGATTC+TGG | - | Chr3:91053418-91053437 | MsG0380017037.01.T01:intron | 40.0% |
| ACTCACGTTACTAGGGTTCT+GGG | - | Chr3:91052634-91052653 | MsG0380017037.01.T01:three_prime_UTR | 45.0% | |
| AGATGTCAAGACCTTGTGGA+AGG | + | Chr3:91053592-91053611 | None:intergenic | 45.0% | |
| ATTTGTCCTGAGGGTCAAGT+GGG | - | Chr3:91052664-91052683 | MsG0380017037.01.T01:three_prime_UTR | 45.0% | |
| CCATGGACTCTGTATCAATC+AGG | + | Chr3:91053476-91053495 | None:intergenic | 45.0% | |
| CCTGATTGATACAGAGTCCA+TGG | - | Chr3:91053473-91053492 | MsG0380017037.01.T01:intron | 45.0% | |
| GAGACTCACTCACGTTACTA+GGG | - | Chr3:91052627-91052646 | MsG0380017037.01.T01:three_prime_UTR | 45.0% | |
| GAGCTCAGGTTCGTGTTTAT+AGG | + | Chr3:91053791-91053810 | None:intergenic | 45.0% | |
| GGCTAAATTCGCCGATGATA+AGG | - | Chr3:91052913-91052932 | MsG0380017037.01.T01:CDS | 45.0% | |
| GGCTTTGCTGATATTGCTGT+TGG | - | Chr3:91053402-91053421 | MsG0380017037.01.T01:intron | 45.0% | |
| GTACCTGTTCTTGTGCATGA+CGG | - | Chr3:91052782-91052801 | MsG0380017037.01.T01:three_prime_UTR | 45.0% | |
| GTGGGCTCTTGAACTAAAAG+GGG | - | Chr3:91052682-91052701 | MsG0380017037.01.T01:three_prime_UTR | 45.0% | |
| TAGGGATCATGTGGAAGAAG+AGG | + | Chr3:91052869-91052888 | None:intergenic | 45.0% | |
| TCCACATGATCCCTATGAGA+GGG | - | Chr3:91052874-91052893 | MsG0380017037.01.T01:CDS | 45.0% | |
| TTACCGTCATGCACAAGAAC+AGG | + | Chr3:91052788-91052807 | None:intergenic | 45.0% | |
| TTCCACATGATCCCTATGAG+AGG | - | Chr3:91052873-91052892 | MsG0380017037.01.T01:CDS | 45.0% | |
| TTCCCTCAAGTCCACTTTCA+AGG | + | Chr3:91053356-91053375 | None:intergenic | 45.0% | |
| ! | GATCCTTGAAAGTGGACTTG+AGG | - | Chr3:91053350-91053369 | MsG0380017037.01.T01:intron | 45.0% |
| ! | GGCGTGCATTCTTTGATAAC+AGG | + | Chr3:91053537-91053556 | None:intergenic | 45.0% |
| ! | TTGAAAGTGGACTTGAGGGA+AGG | - | Chr3:91053355-91053374 | MsG0380017037.01.T01:intron | 45.0% |
| CACTCACGTTACTAGGGTTC+TGG | - | Chr3:91052633-91052652 | MsG0380017037.01.T01:three_prime_UTR | 50.0% | |
| CACTTGACCCTCAGGACAAA+TGG | + | Chr3:91052665-91052684 | None:intergenic | 50.0% | |
| CATTTGTCCTGAGGGTCAAG+TGG | - | Chr3:91052663-91052682 | MsG0380017037.01.T01:three_prime_UTR | 50.0% | |
| CTCACGTTACTAGGGTTCTG+GGG | - | Chr3:91052635-91052654 | MsG0380017037.01.T01:three_prime_UTR | 50.0% | |
| GGAGACTCACTCACGTTACT+AGG | - | Chr3:91052626-91052645 | MsG0380017037.01.T01:three_prime_UTR | 50.0% | |
| GGGTAGTCCATTTGTCCTGA+GGG | - | Chr3:91052655-91052674 | MsG0380017037.01.T01:three_prime_UTR | 50.0% | |
| TTTAGCCCAAAATCGCGCCT+TGG | + | Chr3:91052900-91052919 | None:intergenic | 50.0% | |
| GCCCTCTCATAGGGATCATG+TGG | + | Chr3:91052878-91052897 | None:intergenic | 55.0% | |
| GGGGTAGTCCATTTGTCCTG+AGG | - | Chr3:91052654-91052673 | MsG0380017037.01.T01:three_prime_UTR | 55.0% | |
| TGATCCCTATGAGAGGGCCA+AGG | - | Chr3:91052880-91052899 | MsG0380017037.01.T01:CDS | 55.0% | |
| !! | CTTGAGGGAAGGCGCTACTT+TGG | - | Chr3:91053366-91053385 | MsG0380017037.01.T01:intron | 55.0% |
| CAAGAGCCCACTTGACCCTC+AGG | + | Chr3:91052673-91052692 | None:intergenic | 60.0% | |
| GCACAGCAAGGCCTTCCACA+AGG | - | Chr3:91053578-91053597 | MsG0380017037.01.T01:CDS | 60.0% | |
| ! | AGAGGGCCAAGGCGCGATTT+TGG | - | Chr3:91052891-91052910 | MsG0380017037.01.T01:CDS | 60.0% |
| ! | GAGGGCCAAGGCGCGATTTT+GGG | - | Chr3:91052892-91052911 | MsG0380017037.01.T01:CDS | 60.0% |
| !! | GAGGGAAGGCGCTACTTTGG+AGG | - | Chr3:91053369-91053388 | MsG0380017037.01.T01:intron | 60.0% |
| CGCGCCTTGGCCCTCTCATA+GGG | + | Chr3:91052887-91052906 | None:intergenic | 65.0% | |
| TCGCGCCTTGGCCCTCTCAT+AGG | + | Chr3:91052888-91052907 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 91052588 | 91053863 | 91052588 | ID=MsG0380017037.01;Name=MsG0380017037.01 |
| Chr3 | mRNA | 91052588 | 91053863 | 91052588 | ID=MsG0380017037.01.T01;Parent=MsG0380017037.01;Name=MsG0380017037.01.T01;_AED=0.39;_eAED=0.39;_QI=32|1|1|1|1|1|2|240|223 |
| Chr3 | exon | 91052588 | 91053184 | 91052588 | ID=MsG0380017037.01.T01:exon:20624;Parent=MsG0380017037.01.T01 |
| Chr3 | exon | 91053517 | 91053863 | 91053517 | ID=MsG0380017037.01.T01:exon:20623;Parent=MsG0380017037.01.T01 |
| Chr3 | five_prime_UTR | 91053832 | 91053863 | 91053832 | ID=MsG0380017037.01.T01:five_prime_utr;Parent=MsG0380017037.01.T01 |
| Chr3 | CDS | 91053517 | 91053831 | 91053517 | ID=MsG0380017037.01.T01:cds;Parent=MsG0380017037.01.T01 |
| Chr3 | CDS | 91052828 | 91053184 | 91052828 | ID=MsG0380017037.01.T01:cds;Parent=MsG0380017037.01.T01 |
| Chr3 | three_prime_UTR | 91052588 | 91052827 | 91052588 | ID=MsG0380017037.01.T01:three_prime_utr;Parent=MsG0380017037.01.T01 |
| Gene Sequence |
| Protein sequence |
