AlfalfaGEDB | MsG0280006596.01

M. sativa cultivar ZhongmuNo.1 / MsG0280006596.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006596.01.T01	XP_013462453.1	70.445	247	11	3	1	185	1	247	9.09E-111	326

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006596.01.T01	A0A072V3T4	70.445	247	11	3	1	185	1	247	4.34e-111	326

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047912.01	MsG0280006596.01	0.805268	1.449056e-49	7.632605e-47
MsG0080048137.01	MsG0280006596.01	0.827858	1.240270e-54	1.212160e-51
MsG0080048197.01	MsG0280006596.01	0.808950	2.407755e-50	1.395278e-47
MsG0080048656.01	MsG0280006596.01	0.805624	1.219959e-49	6.485286e-47
MsG0080048687.01	MsG0280006596.01	0.817999	2.463404e-52	1.821808e-49
MsG0080048843.01	MsG0280006596.01	0.808060	3.728716e-50	2.110827e-47
MsG0080049059.01	MsG0280006596.01	0.827166	1.817727e-54	1.740995e-51
MsG0180000732.01	MsG0280006596.01	0.807402	5.143394e-50	2.862197e-47
MsG0180000824.01	MsG0280006596.01	0.818508	1.889578e-52	1.417169e-49
MsG0180001117.01	MsG0280006596.01	0.812425	4.267196e-51	2.712376e-48
MsG0180001522.01	MsG0280006596.01	0.802537	5.352446e-49	2.628502e-46
MsG0180001599.01	MsG0280006596.01	0.817969	2.502454e-52	1.849061e-49
MsG0180002489.01	MsG0280006596.01	0.852103	5.749259e-61	1.188653e-57
MsG0180002491.01	MsG0280006596.01	0.844049	9.617002e-59	1.533966e-55
MsG0180003088.01	MsG0280006596.01	0.811133	8.153953e-51	5.006952e-48
MsG0180003174.01	MsG0280006596.01	0.825305	5.040668e-54	4.577169e-51
MsG0180003337.01	MsG0280006596.01	0.816671	4.904556e-52	3.497479e-49
MsG0180003864.01	MsG0280006596.01	0.827494	1.516393e-54	1.466342e-51
MsG0180004398.01	MsG0280006596.01	0.803100	4.095410e-49	2.040138e-46
MsG0180004602.01	MsG0280006596.01	0.803352	3.632583e-49	1.821315e-46
MsG0180004603.01	MsG0280006596.01	0.817270	3.598359e-52	2.608360e-49
MsG0180004767.01	MsG0280006596.01	0.804557	2.039984e-49	1.055049e-46
MsG0180005125.01	MsG0280006596.01	0.811295	7.518454e-51	4.636229e-48
MsG0180005371.01	MsG0280006596.01	0.837017	6.659082e-57	8.539868e-54
MsG0180005765.01	MsG0280006596.01	0.800576	1.350789e-48	6.311722e-46
MsG0180006013.01	MsG0280006596.01	0.808823	2.562458e-50	1.479979e-47
MsG0180006016.01	MsG0280006596.01	0.810098	1.364960e-50	8.154696e-48
MsG0280006376.01	MsG0280006596.01	0.813964	1.960371e-51	1.298581e-48
MsG0280006411.01	MsG0280006596.01	0.850420	1.717468e-60	3.362492e-57
MsG0280006519.01	MsG0280006596.01	0.802912	4.479167e-49	2.220819e-46
MsG0280006595.01	MsG0280006596.01	0.829735	4.358759e-55	4.500443e-52
MsG0280006596.01	MsG0280006728.01	0.807110	5.931444e-50	3.275515e-47
MsG0280006596.01	MsG0280007161.01	0.831273	1.832739e-55	1.979009e-52
MsG0280006596.01	MsG0280007321.01	0.806650	7.419123e-50	4.048501e-47
MsG0280006596.01	MsG0280007439.01	0.816237	6.134102e-52	4.322735e-49
MsG0280006596.01	MsG0280007609.01	0.818695	1.714285e-52	1.292280e-49
MsG0280006596.01	MsG0280008286.01	0.814177	1.759437e-51	1.172224e-48
MsG0280006596.01	MsG0280008885.01	0.850101	2.111481e-60	4.090629e-57
MsG0280006596.01	MsG0280008971.01	0.815119	1.088377e-51	7.438113e-49
MsG0280006596.01	MsG0280009109.01	0.824736	6.866205e-54	6.134897e-51
MsG0280006596.01	MsG0280009140.01	0.848657	5.329720e-60	9.850608e-57
MsG0280006596.01	MsG0280009235.01	0.800395	1.470764e-48	6.840777e-46
MsG0280006596.01	MsG0280010002.01	0.811246	7.705237e-51	4.745450e-48
MsG0280006596.01	MsG0280010389.01	0.867146	1.696675e-65	5.861483e-62
MsG0280006596.01	MsG0280010416.01	0.810978	8.809211e-51	5.387766e-48
MsG0280006596.01	MsG0280010551.01	0.820329	7.263565e-53	5.729715e-50
MsG0280006596.01	MsG0280011070.01	0.821531	3.842360e-53	3.134017e-50
MsG0280006596.01	MsG0280011235.01	0.810079	1.377813e-50	8.227225e-48
MsG0280006596.01	MsG0380011729.01	0.819682	1.021621e-52	7.915226e-50
MsG0280006596.01	MsG0380013507.01	0.804260	2.352724e-49	1.207488e-46
MsG0280006596.01	MsG0380014259.01	0.835332	1.784644e-56	2.175672e-53
MsG0280006596.01	MsG0380014330.01	0.829706	4.430099e-55	4.570145e-52
MsG0280006596.01	MsG0380014365.01	0.813419	2.584597e-51	1.686996e-48
MsG0280006596.01	MsG0380015400.01	0.825170	5.423260e-54	4.906003e-51
MsG0280006596.01	MsG0380015779.01	0.806713	7.195388e-50	3.933039e-47
MsG0280006596.01	MsG0380015793.01	-0.808124	3.613120e-50	2.048906e-47
MsG0280006596.01	MsG0380015893.01	0.813572	2.391150e-51	1.567226e-48
MsG0280006596.01	MsG0380015922.01	0.809153	2.178101e-50	1.269162e-47
MsG0280006596.01	MsG0380016752.01	0.800911	1.154042e-48	5.438669e-46
MsG0280006596.01	MsG0380017226.01	0.850114	2.092797e-60	4.055959e-57
MsG0280006596.01	MsG0380017403.01	0.822536	2.247790e-53	1.886765e-50
MsG0280006596.01	MsG0380017719.01	0.805995	1.019637e-49	5.472427e-47
MsG0280006596.01	MsG0380018001.01	0.848992	4.302721e-60	8.039898e-57
MsG0280006596.01	MsG0480018213.01	0.826575	2.516141e-54	2.368795e-51
MsG0280006596.01	MsG0480018462.01	0.806928	6.483405e-50	3.563506e-47
MsG0280006596.01	MsG0480018477.01	0.812697	3.720999e-51	2.382120e-48
MsG0280006596.01	MsG0480018906.01	0.822826	1.924826e-53	1.629002e-50
MsG0280006596.01	MsG0480020065.01	0.818489	1.908303e-52	1.430484e-49
MsG0280006596.01	MsG0480020372.01	0.841291	5.195784e-58	7.598692e-55
MsG0280006596.01	MsG0480020416.01	0.840501	8.371888e-58	1.194890e-54
MsG0280006596.01	MsG0480020445.01	0.813938	1.986855e-51	1.315136e-48
MsG0280006596.01	MsG0480020591.01	0.808529	2.961327e-50	1.697267e-47
MsG0280006596.01	MsG0480020791.01	0.836496	9.045776e-57	1.141883e-53
MsG0280006596.01	MsG0480021240.01	0.800876	1.173341e-48	5.524651e-46
MsG0280006596.01	MsG0480021448.01	0.824929	6.183973e-54	5.555785e-51
MsG0280006596.01	MsG0480021464.01	0.852529	4.349444e-61	9.114303e-58
MsG0280006596.01	MsG0480021772.01	0.811108	8.257121e-51	5.066870e-48
MsG0280006596.01	MsG0480022183.01	0.841442	4.741018e-58	6.967650e-55
MsG0280006596.01	MsG0480022467.01	0.810928	9.033313e-51	5.517164e-48
MsG0280006596.01	MsG0480022678.01	0.804802	1.813955e-49	9.441400e-47
MsG0280006596.01	MsG0580024191.01	0.844122	9.192724e-59	1.469498e-55
MsG0280006596.01	MsG0580024438.01	-0.814028	1.897457e-51	1.259120e-48
MsG0280006596.01	MsG0580024458.01	-0.812400	4.321608e-51	2.745109e-48
MsG0280006596.01	MsG0580025134.01	0.835657	1.477013e-56	1.818023e-53
MsG0280006596.01	MsG0580026157.01	0.804718	1.887927e-49	9.805335e-47
MsG0280006596.01	MsG0580026225.01	0.807319	5.357388e-50	2.974859e-47
MsG0280006596.01	MsG0580027344.01	0.803326	3.676999e-49	1.842407e-46
MsG0280006596.01	MsG0580027345.01	0.828887	7.000345e-55	7.048928e-52
MsG0280006596.01	MsG0580028185.01	0.815517	8.877649e-52	6.134240e-49
MsG0280006596.01	MsG0580028289.01	0.809711	1.653472e-50	9.778884e-48
MsG0280006596.01	MsG0580029258.01	0.833010	6.817999e-56	7.752096e-53
MsG0280006596.01	MsG0580029594.01	0.806294	8.822841e-50	4.771212e-47
MsG0280006596.01	MsG0580029658.01	0.824906	6.260621e-54	5.621134e-51
MsG0280006596.01	MsG0580029661.01	0.852090	5.796839e-61	1.198002e-57
MsG0280006596.01	MsG0580030095.01	-0.804771	1.840516e-49	9.572021e-47
MsG0280006596.01	MsG0580030235.01	0.804566	2.031364e-49	1.050830e-46
MsG0280006596.01	MsG0680030316.01	0.820195	7.799185e-53	6.129958e-50
MsG0280006596.01	MsG0680031133.01	0.840665	7.581644e-58	1.087567e-54
MsG0280006596.01	MsG0680031651.01	0.832154	1.111086e-55	1.231394e-52
MsG0280006596.01	MsG0680031694.01	0.815551	8.723511e-52	6.033136e-49
MsG0280006596.01	MsG0680031712.01	0.817421	3.326207e-52	2.421315e-49
MsG0280006596.01	MsG0680032430.01	0.800570	1.354788e-48	6.329286e-46
MsG0280006596.01	MsG0680033391.01	0.822728	2.028391e-53	1.711909e-50
MsG0280006596.01	MsG0680034061.01	0.831948	1.249669e-55	1.376840e-52
MsG0280006596.01	MsG0680034450.01	0.801597	8.353300e-49	4.005052e-46
MsG0280006596.01	MsG0680034671.01	0.808193	3.492425e-50	1.984137e-47
MsG0280006596.01	MsG0680035048.01	0.864100	1.550429e-64	4.810486e-61
MsG0280006596.01	MsG0680035582.01	0.826011	3.428156e-54	3.176220e-51
MsG0280006596.01	MsG0780037240.01	0.812945	3.283440e-51	2.115669e-48
MsG0280006596.01	MsG0780038444.01	0.804955	1.684679e-49	8.803409e-47
MsG0280006596.01	MsG0780038636.01	0.809451	1.880192e-50	1.104271e-47
MsG0280006596.01	MsG0780039340.01	0.806116	9.618688e-50	5.178103e-47
MsG0280006596.01	MsG0780039452.01	0.831601	1.521962e-55	1.659745e-52
MsG0280006596.01	MsG0780039841.01	0.812871	3.408833e-51	2.192101e-48
MsG0280006596.01	MsG0780040182.01	0.814517	1.480126e-51	9.953137e-49
MsG0280006596.01	MsG0780040360.01	0.814231	1.711648e-51	1.142066e-48
MsG0280006596.01	MsG0780040861.01	0.842593	2.352392e-58	3.584089e-55
MsG0280006596.01	MsG0780040929.01	0.825149	5.487814e-54	4.961456e-51
MsG0280006596.01	MsG0780041399.01	0.822405	2.410968e-53	2.016219e-50
MsG0280006596.01	MsG0780041423.01	0.801508	8.711107e-49	4.167508e-46
MsG0280006596.01	MsG0780041490.01	0.834950	2.227523e-56	2.684480e-53
MsG0280006596.01	MsG0780041754.01	0.824188	9.239139e-54	8.125628e-51
MsG0280006596.01	MsG0880041883.01	0.804722	1.884501e-49	9.788760e-47
MsG0280006596.01	MsG0880041969.01	0.848195	7.154741e-60	1.302538e-56
MsG0280006596.01	MsG0880042811.01	0.854779	9.803041e-62	2.214344e-58
MsG0280006596.01	MsG0880042972.01	0.808776	2.622256e-50	1.512571e-47
MsG0280006596.01	MsG0880043002.01	0.809267	2.058945e-50	1.203378e-47
MsG0280006596.01	MsG0880043082.01	0.815676	8.183851e-52	5.679462e-49
MsG0280006596.01	MsG0880043163.01	0.813057	3.102774e-51	2.005323e-48
MsG0280006596.01	MsG0880043465.01	0.838587	2.632360e-57	3.542002e-54
MsG0280006596.01	MsG0880043592.01	0.819946	8.891884e-53	6.940325e-50
MsG0280006596.01	MsG0880044062.01	-0.800765	1.236094e-48	5.803355e-46
MsG0280006596.01	MsG0880044409.01	0.806832	6.792662e-50	3.724319e-47
MsG0280006596.01	MsG0880044546.01	0.805019	1.633350e-49	8.548757e-47
MsG0280006596.01	MsG0880045479.01	0.802271	6.071567e-49	2.961560e-46
MsG0280006596.01	MsG0880045583.01	0.805824	1.107971e-49	5.920240e-47
MsG0280006596.01	MsG0880045631.01	0.819621	1.054835e-52	8.158449e-50
MsG0280006596.01	MsG0880045653.01	0.836445	9.316846e-57	1.174433e-53
MsG0280006596.01	MsG0880045951.01	0.869434	3.104526e-66	1.165086e-62
MsG0280006596.01	MsG0880045965.01	0.811843	5.715380e-51	3.575906e-48
MsG0280006596.01	MsG0880046047.01	0.806669	7.351290e-50	4.013519e-47
MsG0280006596.01	MsG0880046058.01	0.821018	5.046132e-53	4.058048e-50
MsG0280006596.01	MsG0880046068.01	0.821401	4.117246e-53	3.346137e-50
MsG0280006596.01	MsG0880046074.01	0.826248	3.011278e-54	2.808808e-51
MsG0280006596.01	MsG0880046088.01	0.838680	2.490774e-57	3.360929e-54
MsG0280006596.01	MsG0880046091.01	0.814411	1.561727e-51	1.047215e-48
MsG0280006596.01	MsG0880046177.01	0.819943	8.906519e-53	6.951126e-50
MsG0280006596.01	MsG0880046532.01	0.808169	3.533662e-50	2.006351e-47
MsG0280006596.01	MsG0880046733.01	0.834371	3.115345e-56	3.689767e-53
MsG0280006596.01	MsG0880046933.01	0.814652	1.381620e-51	9.324258e-49
MsG0280006596.01	MsG0880047191.01	0.856227	3.708713e-62	8.789681e-59
MsG0280006596.01	MsG0880047391.01	0.805410	1.352733e-49	7.151663e-47
MsG0280006596.01	MsG0880047497.01	0.804114	2.523816e-49	1.290504e-46
MsG0280006596.01	MsG0880047590.01	0.816365	5.743011e-52	4.061316e-49
MsG0280006596.01	MsG0880047607.01	0.811198	7.891638e-51	4.854177e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006596.01.T01	MTR_2g011490	70.445	247	11	3	1	185	1	247	1.10e-114	326
MsG0280006596.01.T01	MTR_2g011490	98.947	95	1	0	1	95	1	95	9.74e-63	192
MsG0280006596.01.T01	MTR_4g091550	46.698	212	51	4	33	182	31	242	4.94e-54	172

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006596.01.T01	AT1G11380	40.777	206	57	7	31	173	41	244	2.49e-39	135

Find 82 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTAAAAGTTTGAACTTAAAT+AGG	0.194117	2:-3847991	None:intergenic
TTTGGAGGGTATGGCTGTTT+TGG	0.210048	2:+3844761	MsG0280006596.01.T01:CDS
AAGTAGACTTATTCTCAATA+TGG	0.263097	2:+3847691	MsG0280006596.01.T01:three_prime_UTR
TATGCTCTATTTCTTCTATA+AGG	0.282864	2:-3847342	None:intergenic
TGAAGAGAATGAGAGGCTTT+TGG	0.304843	2:+3844743	MsG0280006596.01.T01:CDS
ATTCATCTTAACTCTCTTGT+AGG	0.309483	2:-3847939	None:intergenic
AGTATGTCATTCTAAACTAA+TGG	0.321468	2:+3847794	MsG0280006596.01.T01:three_prime_UTR
GAAAATAAGTCTACACTGTT+TGG	0.329716	2:+3847557	MsG0280006596.01.T01:three_prime_UTR
ATCAAGCTTGGCTCTATTAT+AGG	0.343228	2:+3847960	MsG0280006596.01.T01:three_prime_UTR
TTAGAATGACATACTCTATA+TGG	0.350268	2:-3847786	None:intergenic
TACAAACTGCAAATGGAACT+TGG	0.350486	2:+3844814	MsG0280006596.01.T01:CDS
TACAGCAAGGACAGACAAAA+TGG	0.360421	2:-3846979	None:intergenic
GACCAAAGTGCATGTAAGTT+TGG	0.366129	2:-3847657	None:intergenic
GTATGTCATTCTAAACTAAT+GGG	0.376856	2:+3847795	MsG0280006596.01.T01:three_prime_UTR
AGATGGCACTTGGCACGGTC+GGG	0.384709	2:+3847217	MsG0280006596.01.T01:CDS
GTTGCTTTACAAACTGCAAA+TGG	0.416678	2:+3844807	MsG0280006596.01.T01:CDS
CCATATGCATAGGTGGCATT+AGG	0.420138	2:+3847246	MsG0280006596.01.T01:CDS
CCTAATGCCACCTATGCATA+TGG	0.438749	2:-3847246	None:intergenic
GGGTTGTCTTAGATTTCAAA+AGG	0.443283	2:+3844581	MsG0280006596.01.T01:five_prime_UTR
CTAATCAAACTATATACTAC+AGG	0.453185	2:-3847836	None:intergenic
TGTTGTTGTTGGTGGGGTGT+AGG	0.458669	2:-3844500	None:intergenic
ACAAACTGCAAATGGAACTT+GGG	0.459731	2:+3844815	MsG0280006596.01.T01:CDS
AGTAGACTTATTCTCAATAT+GGG	0.460853	2:+3847692	MsG0280006596.01.T01:three_prime_UTR
TGAAATCTAAGACAACCCTT+TGG	0.467683	2:-3844576	None:intergenic
TTTCATCTGAATTGTATCCC+TGG	0.470447	2:+3847419	MsG0280006596.01.T01:three_prime_UTR
AAGATGGCACTTGGCACGGT+CGG	0.472962	2:+3847216	MsG0280006596.01.T01:CDS
TCCTTGCTGTACATTATGTC+AGG	0.477662	2:+3846991	MsG0280006596.01.T01:CDS
AAATATGCCGGGCAGACACC+AGG	0.483030	2:-3847437	None:intergenic
GAAACAACTAATGTTTGTGT+TGG	0.490041	2:+3847535	MsG0280006596.01.T01:three_prime_UTR
AAACTATATACTACAGGGGC+TGG	0.491204	2:-3847830	None:intergenic
GAACAGCGTGGTGAGGAGTT+TGG	0.502636	2:+3844864	MsG0280006596.01.T01:CDS
TGCATAGGTGGCATTAGGAA+TGG	0.509331	2:+3847251	MsG0280006596.01.T01:CDS
TATCGAGTCGATCAAGCTTA+CGG	0.510820	2:+3847307	MsG0280006596.01.T01:CDS
TTCCAAACTTACATGCACTT+TGG	0.511346	2:+3847655	MsG0280006596.01.T01:three_prime_UTR
GATGGCACTTGGCACGGTCG+GGG	0.514885	2:+3847218	MsG0280006596.01.T01:CDS
CCCGGTACGATCGGTGCTGT+TGG	0.518805	2:-3847488	None:intergenic
ATATTGAGAATAAGTCTACT+TGG	0.524372	2:-3847689	None:intergenic
AAGGTGATGGTGATGGATGA+AGG	0.527235	2:+3844705	MsG0280006596.01.T01:CDS
TTTGTTACAATCATTAAGAA+GGG	0.528792	2:-3847877	None:intergenic
CTAAGAGGTAGTGGCAATCA+CGG	0.529900	2:+3847512	MsG0280006596.01.T01:three_prime_UTR
GCATAGGTGGCATTAGGAAT+GGG	0.533084	2:+3847252	MsG0280006596.01.T01:CDS
AGCTTGATCGACTCGATAGG+AGG	0.534493	2:-3847302	None:intergenic
GATGAAGGAGAAGGAAGAGA+AGG	0.534692	2:+3844720	MsG0280006596.01.T01:CDS
CCGATCGTACCGGGACTAAG+AGG	0.537306	2:+3847497	MsG0280006596.01.T01:three_prime_UTR
GAGAAGGTGAAGAGAATGAG+AGG	0.541850	2:+3844736	MsG0280006596.01.T01:CDS
GCCAACAGCACCGATCGTAC+CGG	0.543319	2:+3847487	MsG0280006596.01.T01:three_prime_UTR
TTGTATCCCTGGTGTCTGCC+CGG	0.545230	2:+3847430	MsG0280006596.01.T01:three_prime_UTR
ACAACGTTCAAGATGGCACT+TGG	0.547096	2:+3847207	MsG0280006596.01.T01:CDS
ACCCATTAAGCAAAACCAAA+GGG	0.550759	2:+3844561	MsG0280006596.01.T01:five_prime_UTR
CCAACAGCACCGATCGTACC+GGG	0.551891	2:+3847488	MsG0280006596.01.T01:three_prime_UTR
ATATCTAATGCAGTATATGT+TGG	0.552283	2:+3846911	MsG0280006596.01.T01:CDS
CCTCTTAGTCCCGGTACGAT+CGG	0.555815	2:-3847497	None:intergenic
GGTTGTCTTAGATTTCAAAA+GGG	0.568294	2:+3844582	MsG0280006596.01.T01:five_prime_UTR
GAGATTAACAACGTTCAAGA+TGG	0.577162	2:+3847200	MsG0280006596.01.T01:CDS
AACCCATTAAGCAAAACCAA+AGG	0.587230	2:+3844560	MsG0280006596.01.T01:five_prime_UTR
GTACCGGGACTAAGAGGTAG+TGG	0.587925	2:+3847503	MsG0280006596.01.T01:three_prime_UTR
CAAACTGCAAATGGAACTTG+GGG	0.589199	2:+3844816	MsG0280006596.01.T01:CDS
TTTGGAGAAGCAACAAGAGA+AGG	0.590249	2:+3844686	MsG0280006596.01.T01:CDS
TAAGAGGTAGTGGCAATCAC+GGG	0.592065	2:+3847513	MsG0280006596.01.T01:three_prime_UTR
CGGGGTGACACCATATGCAT+AGG	0.592251	2:+3847236	MsG0280006596.01.T01:CDS
TAATCAAACTATATACTACA+GGG	0.601716	2:-3847835	None:intergenic
GTAAGCTTGATCGACTCGAT+AGG	0.604079	2:-3847305	None:intergenic
GAGTTAAGATGAATCAAGCT+TGG	0.612315	2:+3847948	MsG0280006596.01.T01:three_prime_UTR
AATCTTGAATCAAAGTTGTG+AGG	0.612660	2:+3847377	MsG0280006596.01.T01:three_prime_UTR
TTGATCGACTCGATAGGAGG+AGG	0.612757	2:-3847299	None:intergenic
ACAAGAGAAGGTGATGGTGA+TGG	0.614123	2:+3844698	MsG0280006596.01.T01:CDS
GAAGCAACAAGAGAAGGTGA+TGG	0.622784	2:+3844692	MsG0280006596.01.T01:CDS
GTTCAAGATGGCACTTGGCA+CGG	0.636982	2:+3847212	MsG0280006596.01.T01:CDS
TCAGGGTAGCGACAGTATGG+TGG	0.637621	2:+3846943	MsG0280006596.01.T01:CDS
GAATTGCTCTTGAATCTGCA+TGG	0.638280	2:+3844940	MsG0280006596.01.T01:CDS
ACCTGACATAATGTACAGCA+AGG	0.643383	2:-3846992	None:intergenic
GGTGACACCATATGCATAGG+TGG	0.644206	2:+3847239	MsG0280006596.01.T01:CDS
TTGCCACTACCTCTTAGTCC+CGG	0.648542	2:-3847506	None:intergenic
TATGTCATTCTAAACTAATG+GGG	0.654822	2:+3847796	MsG0280006596.01.T01:three_prime_UTR
CAGCGTGGTGAGGAGTTTGG+TGG	0.655669	2:+3844867	MsG0280006596.01.T01:CDS
AATATGCCGGGCAGACACCA+GGG	0.660338	2:-3847436	None:intergenic
AATCAAACTATATACTACAG+GGG	0.676678	2:-3847834	None:intergenic
CTACACTGTTTGGAGCCAAG+AGG	0.692215	2:+3847567	MsG0280006596.01.T01:three_prime_UTR
ATGGTGATGGATGAAGGAGA+AGG	0.692827	2:+3844711	MsG0280006596.01.T01:CDS
AGATGATGAACAGCGTGGTG+AGG	0.702639	2:+3844857	MsG0280006596.01.T01:CDS
AAACTGCAAATGGAACTTGG+GGG	0.738736	2:+3844817	MsG0280006596.01.T01:CDS
GGTGGAGATGATGAACAGCG+TGG	0.824994	2:+3844852	MsG0280006596.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAACATTTTAACTTTAAATT+CGG	-	Chr2:3845609-3845628	None:intergenic	10.0%
!!	AAAATTCAATACAATAATGT+TGG	-	Chr2:3847142-3847161	None:intergenic	15.0%
!!	ATGTTTAAGAAAAACAAAAA+AGG	-	Chr2:3844985-3845004	None:intergenic	15.0%
!!!	TAGCAACTAAAATTTAATTT+TGG	+	Chr2:3846681-3846700	MsG0280006596.01.T01:intron	15.0%
!!!	TTAATAAGTTTTAGAATGAA+TGG	+	Chr2:3845391-3845410	MsG0280006596.01.T01:intron	15.0%
!!	ATAGTTGAACTAAATTAGAA+AGG	-	Chr2:3847091-3847110	None:intergenic	20.0%
!!	CTAAAAGTTTGAACTTAAAT+AGG	-	Chr2:3847994-3848013	None:intergenic	20.0%
!!	CTTAATGATTGTAACAAAAA+TGG	+	Chr2:3847882-3847901	MsG0280006596.01.T01:three_prime_UTR	20.0%
!!	GAAAATAACCAAGATATATT+GGG	-	Chr2:3845573-3845592	None:intergenic	20.0%
!!	TAATCAAACTATATACTACA+GGG	-	Chr2:3847838-3847857	None:intergenic	20.0%
!!	TATATTGGGACATTAATTTA+AGG	-	Chr2:3845559-3845578	None:intergenic	20.0%
!!	TGAAAATAACCAAGATATAT+TGG	-	Chr2:3845574-3845593	None:intergenic	20.0%
!!	TTCAAAAAAGAATGTAATGA+AGG	+	Chr2:3847463-3847482	MsG0280006596.01.T01:three_prime_UTR	20.0%
!!	TTTGTTACAATCATTAAGAA+GGG	-	Chr2:3847880-3847899	None:intergenic	20.0%
!!!	AATATATCTTGGTTATTTTC+AGG	+	Chr2:3845573-3845592	MsG0280006596.01.T01:intron	20.0%
!!!	AGTTGGTAACTTTTTTTTTT+TGG	+	Chr2:3844644-3844663	MsG0280006596.01.T01:five_prime_UTR	20.0%
!!!	CTATTTTTGAGATAGAATTT+TGG	-	Chr2:3845361-3845380	None:intergenic	20.0%
!!!	GTTGGTAACTTTTTTTTTTT+GGG	+	Chr2:3844645-3844664	MsG0280006596.01.T01:five_prime_UTR	20.0%
!!!	TAACTTAAAGCTTTAACAAA+AGG	+	Chr2:3846210-3846229	MsG0280006596.01.T01:intron	20.0%
!!!	TAATAAATATGCTCTCATTT+TGG	-	Chr2:3847116-3847135	None:intergenic	20.0%
!!!	TGAACAAGACAAATTATTTT+TGG	-	Chr2:3846589-3846608	None:intergenic	20.0%
!!!	TGTGCTTTAAATTAAATCAA+GGG	-	Chr2:3846652-3846671	None:intergenic	20.0%
!!!	TTAATCTTTTATTCTCAAGT+AGG	+	Chr2:3847916-3847935	MsG0280006596.01.T01:three_prime_UTR	20.0%
!!!	TTGTGCTTTAAATTAAATCA+AGG	-	Chr2:3846653-3846672	None:intergenic	20.0%
!!!	TTTTGTTAAAGCTTTAAGTT+AGG	-	Chr2:3846211-3846230	None:intergenic	20.0%
!!!	TTTTGTTACAATCATTAAGA+AGG	-	Chr2:3847881-3847900	None:intergenic	20.0%
!!!	TTTTGTTTTTGTTCATTTTG+AGG	+	Chr2:3845063-3845082	MsG0280006596.01.T01:intron	20.0%
!!!	TTTTTTGAAATCAAATATGC+CGG	-	Chr2:3847452-3847471	None:intergenic	20.0%
!	AAACATAACAAGCAAACAAT+CGG	-	Chr2:3845199-3845218	None:intergenic	25.0%
!	AAAGTCTAAACATAGGATTA+AGG	-	Chr2:3845315-3845334	None:intergenic	25.0%
!	AAGTAGACTTATTCTCAATA+TGG	+	Chr2:3847691-3847710	MsG0280006596.01.T01:three_prime_UTR	25.0%
!	AATCAAACTATATACTACAG+GGG	-	Chr2:3847837-3847856	None:intergenic	25.0%
!	AGTAGACTTATTCTCAATAT+GGG	+	Chr2:3847692-3847711	MsG0280006596.01.T01:three_prime_UTR	25.0%
!	AGTATGTCATTCTAAACTAA+TGG	+	Chr2:3847794-3847813	MsG0280006596.01.T01:three_prime_UTR	25.0%
!	ATATCTAATGCAGTATATGT+TGG	+	Chr2:3846911-3846930	MsG0280006596.01.T01:CDS	25.0%
!	ATATTGAGAATAAGTCTACT+TGG	-	Chr2:3847692-3847711	None:intergenic	25.0%
!	ATCACAAAAGAATATCTTAC+AGG	-	Chr2:3845284-3845303	None:intergenic	25.0%
!	ATTAATGTCCCAATATATCT+TGG	+	Chr2:3845562-3845581	MsG0280006596.01.T01:intron	25.0%
!	CTAATCAAACTATATACTAC+AGG	-	Chr2:3847839-3847858	None:intergenic	25.0%
!	GTATGTCATTCTAAACTAAT+GGG	+	Chr2:3847795-3847814	MsG0280006596.01.T01:three_prime_UTR	25.0%
!	TATGTCATTCTAAACTAATG+GGG	+	Chr2:3847796-3847815	MsG0280006596.01.T01:three_prime_UTR	25.0%
!	TCCAAAAAAAAAAAACACAC+TGG	+	Chr2:3845994-3846013	MsG0280006596.01.T01:intron	25.0%
!	TTAATCCTATGTTTAGACTT+TGG	+	Chr2:3845314-3845333	MsG0280006596.01.T01:intron	25.0%
!	TTAGAATGACATACTCTATA+TGG	-	Chr2:3847789-3847808	None:intergenic	25.0%
!!	AATCTAAAGAGTGCATATTA+GGG	+	Chr2:3846618-3846637	MsG0280006596.01.T01:intron	25.0%
!!	ATATGTTGGTATCTATTTTC+AGG	+	Chr2:3846925-3846944	MsG0280006596.01.T01:CDS	25.0%
!!	ATTTTGCAAACTAACAACAT+GGG	-	Chr2:3847764-3847783	None:intergenic	25.0%
!!	TAATCTAAAGAGTGCATATT+AGG	+	Chr2:3846617-3846636	MsG0280006596.01.T01:intron	25.0%
!!	TATGCTCTATTTCTTCTATA+AGG	-	Chr2:3847345-3847364	None:intergenic	25.0%
!!	TATGTTGGTATCTATTTTCA+GGG	+	Chr2:3846926-3846945	MsG0280006596.01.T01:CDS	25.0%
!!!	ACCAGTGTGTTTTTTTTTTT+TGG	-	Chr2:3845998-3846017	None:intergenic	25.0%
!!!	ATATCCTTGTTTTATATTGC+AGG	+	Chr2:3846307-3846326	MsG0280006596.01.T01:intron	25.0%
!!!	CTTTTTTTTTTTGGGTTTTG+AGG	+	Chr2:3844653-3844672	MsG0280006596.01.T01:five_prime_UTR	25.0%
!!!	TCATTTTGAGGTTTTTTGTT+TGG	+	Chr2:3845075-3845094	MsG0280006596.01.T01:intron	25.0%
!!!	TTTTTGAAATCAAATATGCC+GGG	-	Chr2:3847451-3847470	None:intergenic	25.0%
	AAAATCAGAGAAGTTGAACA+TGG	-	Chr2:3846260-3846279	None:intergenic	30.0%
	AAACTTGTCTGTGAATAACT+AGG	-	Chr2:3846531-3846550	None:intergenic	30.0%
	AAAGAAATTCAACATCAAGG+TGG	+	Chr2:3846475-3846494	MsG0280006596.01.T01:intron	30.0%
	AACTGAAACTATAAGCTCAA+AGG	-	Chr2:3845242-3845261	None:intergenic	30.0%
	AAGAAATTCAACATCAAGGT+GGG	+	Chr2:3846476-3846495	MsG0280006596.01.T01:intron	30.0%
	AATCTTGAATCAAAGTTGTG+AGG	+	Chr2:3847377-3847396	MsG0280006596.01.T01:three_prime_UTR	30.0%
	AATGCCTGCAATATAAAACA+AGG	-	Chr2:3846314-3846333	None:intergenic	30.0%
	ACTGAAACTATAAGCTCAAA+GGG	-	Chr2:3845241-3845260	None:intergenic	30.0%
	ATTCATCTTAACTCTCTTGT+AGG	-	Chr2:3847942-3847961	None:intergenic	30.0%
	CATGTCATGAACAAATTCAT+AGG	-	Chr2:3845920-3845939	None:intergenic	30.0%
	GAAAATAAGTCTACACTGTT+TGG	+	Chr2:3847557-3847576	MsG0280006596.01.T01:three_prime_UTR	30.0%
	GAAACAACTAATGTTTGTGT+TGG	+	Chr2:3847535-3847554	MsG0280006596.01.T01:three_prime_UTR	30.0%
	GAAGTTTAGCTAATTGTGTA+AGG	+	Chr2:3845138-3845157	MsG0280006596.01.T01:intron	30.0%
	GGAAATTGTCAATTCGAAAT+AGG	-	Chr2:3846239-3846258	None:intergenic	30.0%
	GGTTGTCTTAGATTTCAAAA+GGG	+	Chr2:3844582-3844601	MsG0280006596.01.T01:five_prime_UTR	30.0%
	TAGCTAATTGTGTAAGGAAT+TGG	+	Chr2:3845144-3845163	MsG0280006596.01.T01:intron	30.0%
	TGAGAAAGAGAAGAAAAAGT+TGG	+	Chr2:3844627-3844646	MsG0280006596.01.T01:five_prime_UTR	30.0%
	TGAGATAAAGCTATTGATGA+CGG	+	Chr2:3847061-3847080	MsG0280006596.01.T01:intron	30.0%
	TGGGACATTAATTTAAGGAT+TGG	-	Chr2:3845554-3845573	None:intergenic	30.0%
!	CATTTTGCAAACTAACAACA+TGG	-	Chr2:3847765-3847784	None:intergenic	30.0%
!	GACTAACTTGGATGTAATTT+TGG	+	Chr2:3846878-3846897	MsG0280006596.01.T01:intron	30.0%
!	GCTTTAAATTAAATCAAGGG+TGG	-	Chr2:3846649-3846668	None:intergenic	30.0%
!	TTTTGCAAACTAACAACATG+GGG	-	Chr2:3847763-3847782	None:intergenic	30.0%
!!	ATATGGGATAGCTTAGTTTT+TGG	+	Chr2:3847708-3847727	MsG0280006596.01.T01:three_prime_UTR	30.0%
!!	TCCTTTAAAATCCTCTAAAG+CGG	-	Chr2:3846722-3846741	None:intergenic	30.0%
!!	TCTAAACATTTTGATCCTCT+TGG	-	Chr2:3847585-3847604	None:intergenic	30.0%
!!	TGCTTGTTATGTTTCATTTC+TGG	+	Chr2:3845205-3845224	MsG0280006596.01.T01:intron	30.0%
!!	TTTTACGTTGTTGTTGTTGT+TGG	-	Chr2:3844514-3844533	None:intergenic	30.0%
!!!	CTTAATGGGTTTTCAGAAAA+TGG	-	Chr2:3844551-3844570	None:intergenic	30.0%
!!!	GTGAGGAAGTTTTAAAACAA+TGG	+	Chr2:3847394-3847413	MsG0280006596.01.T01:three_prime_UTR	30.0%
!!!	TGAGGTTTTTTGTTTGGTTT+TGG	+	Chr2:3845081-3845100	MsG0280006596.01.T01:intron	30.0%
!!!	TTTTTGGGTTTTGAGGTAAT+GGG	+	Chr2:3844660-3844679	MsG0280006596.01.T01:exon	30.0%
!!!	TTTTTTGGGTTTTGAGGTAA+TGG	+	Chr2:3844659-3844678	MsG0280006596.01.T01:exon	30.0%
	AACAGTGAAAACAGAAAGTC+AGG	-	Chr2:3845724-3845743	None:intergenic	35.0%
	AACCCATTAAGCAAAACCAA+AGG	+	Chr2:3844560-3844579	MsG0280006596.01.T01:five_prime_UTR	35.0%
	AATCACGTTCCTCATAGATT+CGG	-	Chr2:3845683-3845702	None:intergenic	35.0%
	ACAAACTGCAAATGGAACTT+GGG	+	Chr2:3844815-3844834	MsG0280006596.01.T01:CDS	35.0%
	ACCCATTAAGCAAAACCAAA+GGG	+	Chr2:3844561-3844580	MsG0280006596.01.T01:five_prime_UTR	35.0%
	AGAGTTTCGGAGAAAAGAAA+AGG	-	Chr2:3845637-3845656	None:intergenic	35.0%
	AGTGTACAACAAGTCAAGAA+AGG	-	Chr2:3847033-3847052	None:intergenic	35.0%
	ATTACTGGTGGAGCATATTT+AGG	+	Chr2:3846431-3846450	MsG0280006596.01.T01:intron	35.0%
	ATTTCTTTCGCATACGAGTT+CGG	-	Chr2:3846463-3846482	None:intergenic	35.0%
	ATTTGTCCAAAGTTGCACTT+TGG	+	Chr2:3846741-3846760	MsG0280006596.01.T01:intron	35.0%
	CATGACATGAACTTTCTTAC+TGG	+	Chr2:3845931-3845950	MsG0280006596.01.T01:intron	35.0%
	CCTATGTTTAGACTTTGGAT+GGG	+	Chr2:3845319-3845338	MsG0280006596.01.T01:intron	35.0%
	CTATGTTTAGACTTTGGATG+GGG	+	Chr2:3845320-3845339	MsG0280006596.01.T01:intron	35.0%
	GACCTATCATCATCAAACTT+GGG	+	Chr2:3845420-3845439	MsG0280006596.01.T01:intron	35.0%
	GAGATTAACAACGTTCAAGA+TGG	+	Chr2:3847200-3847219	MsG0280006596.01.T01:CDS	35.0%
	GAGTTAAGATGAATCAAGCT+TGG	+	Chr2:3847948-3847967	MsG0280006596.01.T01:three_prime_UTR	35.0%
	GCGAAAGAAATTCAACATCA+AGG	+	Chr2:3846472-3846491	MsG0280006596.01.T01:intron	35.0%
	GGGTTGTCTTAGATTTCAAA+AGG	+	Chr2:3844581-3844600	MsG0280006596.01.T01:five_prime_UTR	35.0%
	TACAAACTGCAAATGGAACT+TGG	+	Chr2:3844814-3844833	MsG0280006596.01.T01:CDS	35.0%
	TATAACAGGATGGAGAGTTT+CGG	-	Chr2:3845650-3845669	None:intergenic	35.0%
	TATGTTTAGACTTTGGATGG+GGG	+	Chr2:3845321-3845340	MsG0280006596.01.T01:intron	35.0%
	TATTGCATACAACCCCAAAA+GGG	+	Chr2:3845748-3845767	MsG0280006596.01.T01:intron	35.0%
	TCATCATTCAAAACCATACC+AGG	-	Chr2:3845849-3845868	None:intergenic	35.0%
	TCCTATGTTTAGACTTTGGA+TGG	+	Chr2:3845318-3845337	MsG0280006596.01.T01:intron	35.0%
	TGACCTATCATCATCAAACT+TGG	+	Chr2:3845419-3845438	MsG0280006596.01.T01:intron	35.0%
	TTATTGCATACAACCCCAAA+AGG	+	Chr2:3845747-3845766	MsG0280006596.01.T01:intron	35.0%
	TTCCAAACTTACATGCACTT+TGG	+	Chr2:3847655-3847674	MsG0280006596.01.T01:three_prime_UTR	35.0%
	TTTCATCTGAATTGTATCCC+TGG	+	Chr2:3847419-3847438	MsG0280006596.01.T01:three_prime_UTR	35.0%
!	GGAGTATGGTTGGTTAATAT+TGG	+	Chr2:3846825-3846844	MsG0280006596.01.T01:intron	35.0%
!	GTTGCTTTACAAACTGCAAA+TGG	+	Chr2:3844807-3844826	MsG0280006596.01.T01:CDS	35.0%
!	TCAATACATGCTGACTAACT+TGG	+	Chr2:3846866-3846885	MsG0280006596.01.T01:intron	35.0%
!	TCTTGGTTCTTGCTATATTC+AGG	+	Chr2:3846127-3846146	MsG0280006596.01.T01:intron	35.0%
!	TGAAATCTAAGACAACCCTT+TGG	-	Chr2:3844579-3844598	None:intergenic	35.0%
!!	ATCAAGCTTGGCTCTATTAT+AGG	+	Chr2:3847960-3847979	MsG0280006596.01.T01:three_prime_UTR	35.0%
!!	CCTTTAAAATCCTCTAAAGC+GGG	-	Chr2:3846721-3846740	None:intergenic	35.0%
!!	GTTTATTTTCTCATCGTGGT+GGG	+	Chr2:3845780-3845799	MsG0280006596.01.T01:intron	35.0%
!!	TGGTTTGCTGTTACTTACAA+GGG	+	Chr2:3846014-3846033	MsG0280006596.01.T01:intron	35.0%
!!	TGTAAGGAATTGGTGATGAT+TGG	+	Chr2:3845154-3845173	MsG0280006596.01.T01:intron	35.0%
!!!	AACCCTTTGGTTTTGCTTAA+TGG	-	Chr2:3844566-3844585	None:intergenic	35.0%
!!!	ACCCTTTGGTTTTGCTTAAT+GGG	-	Chr2:3844565-3844584	None:intergenic	35.0%
!!!	ATGCCATTTTAGACTTTCGT+TGG	-	Chr2:3845957-3845976	None:intergenic	35.0%
!!!	TTTTGAGGTAATGGGTGATT+TGG	+	Chr2:3844668-3844687	MsG0280006596.01.T01:exon	35.0%
	AAAACCATCCTCCATCACAT+TGG	-	Chr2:3846768-3846787	None:intergenic	40.0%
	AAACTATATACTACAGGGGC+TGG	-	Chr2:3847833-3847852	None:intergenic	40.0%
	AAACTGCAAATGGAACTTGG+GGG	+	Chr2:3844817-3844836	MsG0280006596.01.T01:CDS	40.0%
	ACAGTCACCTTCATCATTAC+TGG	+	Chr2:3846416-3846435	MsG0280006596.01.T01:intron	40.0%
	ACCTGACATAATGTACAGCA+AGG	-	Chr2:3846995-3847014	None:intergenic	40.0%
	ACTCCTGCATCATGATACAA+AGG	-	Chr2:3847169-3847188	None:intergenic	40.0%
	ATCACGTTCCTCATAGATTC+GGG	-	Chr2:3845682-3845701	None:intergenic	40.0%
	ATTGGTCCAAAGTGCAACTT+TGG	-	Chr2:3846750-3846769	None:intergenic	40.0%
	CAAACTGCAAATGGAACTTG+GGG	+	Chr2:3844816-3844835	MsG0280006596.01.T01:CDS	40.0%
	CCCATCCAAAGTCTAAACAT+AGG	-	Chr2:3845322-3845341	None:intergenic	40.0%
	GAATTGCTCTTGAATCTGCA+TGG	+	Chr2:3844940-3844959	MsG0280006596.01.T01:CDS	40.0%
	GACCAAAGTGCATGTAAGTT+TGG	-	Chr2:3847660-3847679	None:intergenic	40.0%
	GCTTCATGTTCTTCCCAAAT+CGG	-	Chr2:3846100-3846119	None:intergenic	40.0%
	GTACCTTTGTATCATGATGC+AGG	+	Chr2:3847163-3847182	MsG0280006596.01.T01:intron	40.0%
	TAATGATGAAGGTGACTGTC+AGG	-	Chr2:3846415-3846434	None:intergenic	40.0%
	TACAGCAAGGACAGACAAAA+TGG	-	Chr2:3846982-3847001	None:intergenic	40.0%
	TATCGAGTCGATCAAGCTTA+CGG	+	Chr2:3847307-3847326	MsG0280006596.01.T01:CDS	40.0%
	TCTATGAGGAACGTGATTTG+TGG	+	Chr2:3845685-3845704	MsG0280006596.01.T01:intron	40.0%
	TGGCCAACGAAAGTCTAAAA+TGG	+	Chr2:3845951-3845970	MsG0280006596.01.T01:intron	40.0%
	TTTGGAGAAGCAACAAGAGA+AGG	+	Chr2:3844686-3844705	MsG0280006596.01.T01:CDS	40.0%
!	ACGTTGTTGTTGTTGTTGGT+GGG	-	Chr2:3844510-3844529	None:intergenic	40.0%
!	GAAGTTGAAAAGAGCACAGA+TGG	-	Chr2:3846354-3846373	None:intergenic	40.0%
!	TACGTTGTTGTTGTTGTTGG+TGG	-	Chr2:3844511-3844530	None:intergenic	40.0%
!	TCACAGACAAGTTTTCACAG+AGG	+	Chr2:3846537-3846556	MsG0280006596.01.T01:intron	40.0%
!	TCCTTGCTGTACATTATGTC+AGG	+	Chr2:3846991-3847010	MsG0280006596.01.T01:CDS	40.0%
!	TGAAGAGAATGAGAGGCTTT+TGG	+	Chr2:3844743-3844762	MsG0280006596.01.T01:CDS	40.0%
!!	CGTTTATTTTCTCATCGTGG+TGG	+	Chr2:3845779-3845798	MsG0280006596.01.T01:intron	40.0%
!!	CTGGTTTGCTGTTACTTACA+AGG	+	Chr2:3846013-3846032	MsG0280006596.01.T01:intron	40.0%
!!	GGGATAGCTTAGTTTTTGGA+TGG	+	Chr2:3847712-3847731	MsG0280006596.01.T01:three_prime_UTR	40.0%
!!	GTCCCAAGTTTGATGATGAT+AGG	-	Chr2:3845425-3845444	None:intergenic	40.0%
!!!	CCCGCTTTAGAGGATTTTAA+AGG	+	Chr2:3846718-3846737	MsG0280006596.01.T01:intron	40.0%
	ACAACGTTCAAGATGGCACT+TGG	+	Chr2:3847207-3847226	MsG0280006596.01.T01:CDS	45.0%
	ACAGAAAGTCAGGACAGAAC+CGG	-	Chr2:3845714-3845733	None:intergenic	45.0%
	ACTTTGGACCAATGTGATGG+AGG	+	Chr2:3846757-3846776	MsG0280006596.01.T01:intron	45.0%
	CAAAACCATACCAGGCATCT+CGG	-	Chr2:3845841-3845860	None:intergenic	45.0%
	CATATGTGCTGGAGTATGGT+TGG	+	Chr2:3846815-3846834	MsG0280006596.01.T01:intron	45.0%
	CATGCATATGTGCTGGAGTA+TGG	+	Chr2:3846811-3846830	MsG0280006596.01.T01:intron	45.0%
	CCATATGCATAGGTGGCATT+AGG	+	Chr2:3847246-3847265	MsG0280006596.01.T01:CDS	45.0%
	CCTAATGCCACCTATGCATA+TGG	-	Chr2:3847249-3847268	None:intergenic	45.0%
	GAAGCAACAAGAGAAGGTGA+TGG	+	Chr2:3844692-3844711	MsG0280006596.01.T01:CDS	45.0%
	GAGAAGGTGAAGAGAATGAG+AGG	+	Chr2:3844736-3844755	MsG0280006596.01.T01:CDS	45.0%
	GATGAAGGAGAAGGAAGAGA+AGG	+	Chr2:3844720-3844739	MsG0280006596.01.T01:CDS	45.0%
	GCATAGGTGGCATTAGGAAT+GGG	+	Chr2:3847252-3847271	MsG0280006596.01.T01:CDS	45.0%
	GTCACCTTCATCATTACTGG+TGG	+	Chr2:3846419-3846438	MsG0280006596.01.T01:intron	45.0%
	GTGATGTCTCGTGACGATAA+AGG	-	Chr2:3846381-3846400	None:intergenic	45.0%
	TCCTAACTTTCCCGCTTTAG+AGG	+	Chr2:3846708-3846727	MsG0280006596.01.T01:intron	45.0%
	TGCACTTTGGACCAATGTGA+TGG	+	Chr2:3846754-3846773	MsG0280006596.01.T01:intron	45.0%
	TGCATAGGTGGCATTAGGAA+TGG	+	Chr2:3847251-3847270	MsG0280006596.01.T01:CDS	45.0%
	TGCTCCACCAGTAATGATGA+AGG	-	Chr2:3846426-3846445	None:intergenic	45.0%
	TTCTTCCCAAATCGGTAGCA+GGG	-	Chr2:3846092-3846111	None:intergenic	45.0%
	TTGCTTGCATGCATATGTGC+TGG	+	Chr2:3846804-3846823	MsG0280006596.01.T01:intron	45.0%
!	ACAAGAGAAGGTGATGGTGA+TGG	+	Chr2:3844698-3844717	MsG0280006596.01.T01:CDS	45.0%
!	AGAGAATGAGAGGCTTTTGG+AGG	+	Chr2:3844746-3844765	MsG0280006596.01.T01:CDS	45.0%
!	AGAGGTATGCTGTATGCACA+TGG	+	Chr2:3846555-3846574	MsG0280006596.01.T01:intron	45.0%
!	CGTTGTTGTTGTTGTTGGTG+GGG	-	Chr2:3844509-3844528	None:intergenic	45.0%
!	CTAAGAGGTAGTGGCAATCA+CGG	+	Chr2:3847512-3847531	MsG0280006596.01.T01:three_prime_UTR	45.0%
!	GAGAATGAGAGGCTTTTGGA+GGG	+	Chr2:3844747-3844766	MsG0280006596.01.T01:CDS	45.0%
!	TAAGAGGTAGTGGCAATCAC+GGG	+	Chr2:3847513-3847532	MsG0280006596.01.T01:three_prime_UTR	45.0%
!!	AAACGCGCTGTTTCCCTTTT+GGG	-	Chr2:3845764-3845783	None:intergenic	45.0%
!!	AAGGTGATGGTGATGGATGA+AGG	+	Chr2:3844705-3844724	MsG0280006596.01.T01:CDS	45.0%
!!	ATGGTGATGGATGAAGGAGA+AGG	+	Chr2:3844711-3844730	MsG0280006596.01.T01:CDS	45.0%
!!	ATTTTCTCATCGTGGTGGGA+GGG	+	Chr2:3845784-3845803	MsG0280006596.01.T01:intron	45.0%
!!	GCGCGTTTATTTTCTCATCG+TGG	+	Chr2:3845776-3845795	MsG0280006596.01.T01:intron	45.0%
!!	GTAAGCTTGATCGACTCGAT+AGG	-	Chr2:3847308-3847327	None:intergenic	45.0%
!!	TAAACGCGCTGTTTCCCTTT+TGG	-	Chr2:3845765-3845784	None:intergenic	45.0%
!!	TATTTTCTCATCGTGGTGGG+AGG	+	Chr2:3845783-3845802	MsG0280006596.01.T01:intron	45.0%
!!	TCCTCTAAAGCGGGAAAGTT+AGG	-	Chr2:3846712-3846731	None:intergenic	45.0%
!!	TTTGGAGGGTATGGCTGTTT+TGG	+	Chr2:3844761-3844780	MsG0280006596.01.T01:CDS	45.0%
!!	TTTTCAGGGTAGCGACAGTA+TGG	+	Chr2:3846940-3846959	MsG0280006596.01.T01:CDS	45.0%
!!!	AGGAGTTTGGTGGTGTTTTG+AGG	+	Chr2:3844877-3844896	MsG0280006596.01.T01:CDS	45.0%
!!!	TGGTGGTGTTTTGAGGATGT+GGG	+	Chr2:3844884-3844903	MsG0280006596.01.T01:CDS	45.0%
!!!	TTGGTGGTGTTTTGAGGATG+TGG	+	Chr2:3844883-3844902	MsG0280006596.01.T01:CDS	45.0%
!!!	TTTTGAGTTACCGAGATGCC+TGG	+	Chr2:3845828-3845847	MsG0280006596.01.T01:intron	45.0%
	AATGGAACTTGGGGGAAGCT+TGG	+	Chr2:3844825-3844844	MsG0280006596.01.T01:CDS	50.0%
	AGATGATGAACAGCGTGGTG+AGG	+	Chr2:3844857-3844876	MsG0280006596.01.T01:CDS	50.0%
	AGTTACCGAGATGCCTGGTA+TGG	+	Chr2:3845833-3845852	MsG0280006596.01.T01:intron	50.0%
	GCATGTGGCGTATAACAGGA+TGG	-	Chr2:3845660-3845679	None:intergenic	50.0%
	GGTGACACCATATGCATAGG+TGG	+	Chr2:3847239-3847258	MsG0280006596.01.T01:CDS	50.0%
	GTTCAAGATGGCACTTGGCA+CGG	+	Chr2:3847212-3847231	MsG0280006596.01.T01:CDS	50.0%
	GTTCTTCCCAAATCGGTAGC+AGG	-	Chr2:3846093-3846112	None:intergenic	50.0%
	TAGACTTTGGATGGGGGCTA+TGG	+	Chr2:3845327-3845346	MsG0280006596.01.T01:intron	50.0%
	TCCTCATAGATTCGGGCATG+TGG	-	Chr2:3845675-3845694	None:intergenic	50.0%
	TTGCCACTACCTCTTAGTCC+CGG	-	Chr2:3847509-3847528	None:intergenic	50.0%
!	AACATGAAGCGAGCTGGTCT+TGG	+	Chr2:3846110-3846129	MsG0280006596.01.T01:intron	50.0%
!	AGTTGTCCCTGCTACCGATT+TGG	+	Chr2:3846083-3846102	MsG0280006596.01.T01:intron	50.0%
!	CTACACTGTTTGGAGCCAAG+AGG	+	Chr2:3847567-3847586	MsG0280006596.01.T01:three_prime_UTR	50.0%
!	TGGACCAATGTGATGGAGGA+TGG	+	Chr2:3846761-3846780	MsG0280006596.01.T01:intron	50.0%
!	TGTTGTTGTTGGTGGGGTGT+AGG	-	Chr2:3844503-3844522	None:intergenic	50.0%
!!	AACGCGCTGTTTCCCTTTTG+GGG	-	Chr2:3845763-3845782	None:intergenic	50.0%
!!	AGCTTGATCGACTCGATAGG+AGG	-	Chr2:3847305-3847324	None:intergenic	50.0%
!!	GTTGTCCCTGCTACCGATTT+GGG	+	Chr2:3846084-3846103	MsG0280006596.01.T01:intron	50.0%
!!	TGAGAGGCTTTTGGAGGGTA+TGG	+	Chr2:3844752-3844771	MsG0280006596.01.T01:CDS	50.0%
!!	TTGATCGACTCGATAGGAGG+AGG	-	Chr2:3847302-3847321	None:intergenic	50.0%
!!	TTTTCTCATCGTGGTGGGAG+GGG	+	Chr2:3845785-3845804	MsG0280006596.01.T01:intron	50.0%
!!!	GGTGTTTTGAGGATGTGGGA+AGG	+	Chr2:3844888-3844907	MsG0280006596.01.T01:CDS	50.0%
	AAATATGCCGGGCAGACACC+AGG	-	Chr2:3847440-3847459	None:intergenic	55.0%
	AAGATGGCACTTGGCACGGT+CGG	+	Chr2:3847216-3847235	MsG0280006596.01.T01:CDS	55.0%
	AATATGCCGGGCAGACACCA+GGG	-	Chr2:3847439-3847458	None:intergenic	55.0%
	ACTTTGGATGGGGGCTATGG+AGG	+	Chr2:3845330-3845349	MsG0280006596.01.T01:intron	55.0%
	CCTCTTAGTCCCGGTACGAT+CGG	-	Chr2:3847500-3847519	None:intergenic	55.0%
	CGGGGTGACACCATATGCAT+AGG	+	Chr2:3847236-3847255	MsG0280006596.01.T01:CDS	55.0%
	GAACAGCGTGGTGAGGAGTT+TGG	+	Chr2:3844864-3844883	MsG0280006596.01.T01:CDS	55.0%
	GCCACATGCCCGAATCTATG+AGG	+	Chr2:3845671-3845690	MsG0280006596.01.T01:intron	55.0%
	GGGAAGAACATGAAGCGAGC+TGG	+	Chr2:3846104-3846123	MsG0280006596.01.T01:intron	55.0%
	GGTGGAGATGATGAACAGCG+TGG	+	Chr2:3844852-3844871	MsG0280006596.01.T01:CDS	55.0%
	GTACCGGGACTAAGAGGTAG+TGG	+	Chr2:3847503-3847522	MsG0280006596.01.T01:three_prime_UTR	55.0%
	TCAGGGTAGCGACAGTATGG+TGG	+	Chr2:3846943-3846962	MsG0280006596.01.T01:CDS	55.0%
	TCGGGCATGTGGCGTATAAC+AGG	-	Chr2:3845664-3845683	None:intergenic	55.0%
	TTGTATCCCTGGTGTCTGCC+CGG	+	Chr2:3847430-3847449	MsG0280006596.01.T01:three_prime_UTR	55.0%
!	GGAACGTGATTTGTGGCGAC+CGG	+	Chr2:3845692-3845711	MsG0280006596.01.T01:intron	55.0%
	ACTTGGGGGAAGCTTGGAGG+AGG	+	Chr2:3844831-3844850	MsG0280006596.01.T01:CDS	60.0%
	AGATGGCACTTGGCACGGTC+GGG	+	Chr2:3847217-3847236	MsG0280006596.01.T01:CDS	60.0%
	CAGCGTGGTGAGGAGTTTGG+TGG	+	Chr2:3844867-3844886	MsG0280006596.01.T01:CDS	60.0%
	CCGATCGTACCGGGACTAAG+AGG	+	Chr2:3847497-3847516	MsG0280006596.01.T01:three_prime_UTR	60.0%
	GGAACTTGGGGGAAGCTTGG+AGG	+	Chr2:3844828-3844847	MsG0280006596.01.T01:CDS	60.0%
!!	CCAACAGCACCGATCGTACC+GGG	+	Chr2:3847488-3847507	MsG0280006596.01.T01:three_prime_UTR	60.0%
!!	GCCAACAGCACCGATCGTAC+CGG	+	Chr2:3847487-3847506	MsG0280006596.01.T01:three_prime_UTR	60.0%
	GATGGCACTTGGCACGGTCG+GGG	+	Chr2:3847218-3847237	MsG0280006596.01.T01:CDS	65.0%
	TGGGGGAAGCTTGGAGGAGG+TGG	+	Chr2:3844834-3844853	MsG0280006596.01.T01:CDS	65.0%
!!	CCCGGTACGATCGGTGCTGT+TGG	-	Chr2:3847491-3847510	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	3844479	3848071	3844479	ID=MsG0280006596.01;Name=MsG0280006596.01
Chr2	mRNA	3844479	3848071	3844479	ID=MsG0280006596.01.T01;Parent=MsG0280006596.01;Name=MsG0280006596.01.T01;_AED=0.42;_eAED=0.42;_QI=199\|0.5\|0.66\|1\|1\|1\|3\|722\|185
Chr2	exon	3844479	3844961	3844479	ID=MsG0280006596.01.T01:exon:1775;Parent=MsG0280006596.01.T01
Chr2	exon	3846904	3847012	3846904	ID=MsG0280006596.01.T01:exon:1776;Parent=MsG0280006596.01.T01
Chr2	exon	3847185	3848071	3847185	ID=MsG0280006596.01.T01:exon:1777;Parent=MsG0280006596.01.T01
Chr2	five_prime_UTR	3844479	3844677	3844479	ID=MsG0280006596.01.T01:five_prime_utr;Parent=MsG0280006596.01.T01
Chr2	CDS	3844678	3844961	3844678	ID=MsG0280006596.01.T01:cds;Parent=MsG0280006596.01.T01
Chr2	CDS	3846904	3847012	3846904	ID=MsG0280006596.01.T01:cds;Parent=MsG0280006596.01.T01
Chr2	CDS	3847185	3847349	3847185	ID=MsG0280006596.01.T01:cds;Parent=MsG0280006596.01.T01
Chr2	three_prime_UTR	3847350	3848071	3847350	ID=MsG0280006596.01.T01:three_prime_utr;Parent=MsG0280006596.01.T01

Gene Sequence

>MsG0280006596.01.T01

ATGGGTGATTTGGAGAAGCAACAAGAGAAGGTGATGGTGATGGATGAAGGAGAAGGAAGAGAAGGTGAAGAGAATGAGAGGCTTTTGGAGGGTATGGCTGTTTTGGATTTTGATATGCTTTGTTCATCTGTTGCTTTACAAACTGCAAATGGAACTTGGGGGAAGCTTGGAGGAGGTGGAGATGATGAACAGCGTGGTGAGGAGTTTGGTGGTGTTTTGAGGATGTGGGAAGGTGAAGTTCTTGATTGTTTCGAGCATCGTCGAATTGCTCTTGAATCTGCATGCATTCGTATATCTAATGCAGTATATGTTGGTATCTATTTTCAGGGTAGCGACAGTATGGTGGACGATTGTGTTTACCATTTTGTCTGTCCTTGCTGTACATTATGTCAGGAGTCAAGAACACTAGAGATTAACAACGTTCAAGATGGCACTTGGCACGGTCGGGGTGACACCATATGCATAGGTGGCATTAGGAATGGGAGTAAAGCACTCTCTGAGATGATTCCTCCTCCTATCGAGTCGATCAAGCTTACGGATGAAAATTACACCTTATAG

Protein sequence

>MsG0280006596.01.T01

MGDLEKQQEKVMVMDEGEGREGEENERLLEGMAVLDFDMLCSSVALQTANGTWGKLGGGGDDEQRGEEFGGVLRMWEGEVLDCFEHRRIALESACIRISNAVYVGIYFQGSDSMVDDCVYHFVCPCCTLCQESRTLEINNVQDGTWHGRGDTICIGGIRNGSKALSEMIPPPIESIKLTDENYTL*