Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031431.01.T01 | XP_013451394.1 | 94.669 | 694 | 15 | 1 | 1 | 694 | 1 | 672 | 0 | 1348 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031431.01.T01 | Q54KA7 | 26.844 | 339 | 198 | 12 | 91 | 418 | 91 | 390 | 8.65E-11 | 69.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031431.01.T01 | A0A072U6R4 | 94.669 | 694 | 15 | 1 | 1 | 694 | 1 | 672 | 0.0 | 1348 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048152.01 | MsG0680031431.01 | 0.803029 | 4.236596e-49 | 2.106700e-46 |
| MsG0080048769.01 | MsG0680031431.01 | 0.802014 | 6.858499e-49 | 3.323511e-46 |
| MsG0080048856.01 | MsG0680031431.01 | 0.817800 | 2.732453e-52 | 2.009823e-49 |
| MsG0180000091.01 | MsG0680031431.01 | 0.804488 | 2.108460e-49 | 1.088506e-46 |
| MsG0180000139.01 | MsG0680031431.01 | 0.814553 | 1.452820e-51 | 9.778942e-49 |
| MsG0180000145.01 | MsG0680031431.01 | 0.805539 | 1.271581e-49 | 6.744562e-47 |
| MsG0180000470.01 | MsG0680031431.01 | 0.812337 | 4.460215e-51 | 2.828328e-48 |
| MsG0180000650.01 | MsG0680031431.01 | 0.807939 | 3.955799e-50 | 2.232250e-47 |
| MsG0180000836.01 | MsG0680031431.01 | 0.804313 | 2.293510e-49 | 1.178751e-46 |
| MsG0180000914.01 | MsG0680031431.01 | 0.822192 | 2.701162e-53 | 2.244928e-50 |
| MsG0180001892.01 | MsG0680031431.01 | 0.839416 | 1.605249e-57 | 2.215399e-54 |
| MsG0180002377.01 | MsG0680031431.01 | 0.806728 | 7.144981e-50 | 3.907003e-47 |
| MsG0180002409.01 | MsG0680031431.01 | 0.807482 | 4.947846e-50 | 2.759011e-47 |
| MsG0180003094.01 | MsG0680031431.01 | 0.824642 | 7.225740e-54 | 6.438766e-51 |
| MsG0180003455.01 | MsG0680031431.01 | 0.803299 | 3.725622e-49 | 1.865461e-46 |
| MsG0180003651.01 | MsG0680031431.01 | 0.803852 | 2.860729e-49 | 1.452991e-46 |
| MsG0180003741.01 | MsG0680031431.01 | 0.807179 | 5.734263e-50 | 3.172499e-47 |
| MsG0180003885.01 | MsG0680031431.01 | 0.801617 | 8.273425e-49 | 3.968851e-46 |
| MsG0180003951.01 | MsG0680031431.01 | 0.819249 | 1.282768e-52 | 9.819390e-50 |
| MsG0180004149.01 | MsG0680031431.01 | 0.816928 | 4.294347e-52 | 3.084064e-49 |
| MsG0180004249.01 | MsG0680031431.01 | 0.804087 | 2.555986e-49 | 1.306057e-46 |
| MsG0180004389.01 | MsG0680031431.01 | 0.823174 | 1.596563e-53 | 1.364493e-50 |
| MsG0180004493.01 | MsG0680031431.01 | 0.802304 | 5.979104e-49 | 2.919025e-46 |
| MsG0180004605.01 | MsG0680031431.01 | -0.810524 | 1.104505e-50 | 6.672814e-48 |
| MsG0180004765.01 | MsG0680031431.01 | 0.840225 | 9.885000e-58 | 1.398840e-54 |
| MsG0180004769.01 | MsG0680031431.01 | 0.816165 | 6.365428e-52 | 4.476920e-49 |
| MsG0180005113.01 | MsG0680031431.01 | 0.827514 | 1.499936e-54 | 1.451217e-51 |
| MsG0180005153.01 | MsG0680031431.01 | 0.851952 | 6.348082e-61 | 1.305874e-57 |
| MsG0180005524.01 | MsG0680031431.01 | 0.808033 | 3.778040e-50 | 2.137233e-47 |
| MsG0180005575.01 | MsG0680031431.01 | 0.805408 | 1.354414e-49 | 7.160102e-47 |
| MsG0180006017.01 | MsG0680031431.01 | 0.822426 | 2.383426e-53 | 1.994403e-50 |
| MsG0180006096.01 | MsG0680031431.01 | 0.800597 | 1.337700e-48 | 6.253804e-46 |
| MsG0180006224.01 | MsG0680031431.01 | 0.819328 | 1.230133e-52 | 9.436677e-50 |
| MsG0280006324.01 | MsG0680031431.01 | 0.807197 | 5.684758e-50 | 3.146570e-47 |
| MsG0280010722.01 | MsG0680031431.01 | 0.817760 | 2.790316e-52 | 2.050121e-49 |
| MsG0280010778.01 | MsG0680031431.01 | 0.814723 | 1.332620e-51 | 9.010903e-49 |
| MsG0280011014.01 | MsG0680031431.01 | 0.802464 | 5.542275e-49 | 2.716670e-46 |
| MsG0280011101.01 | MsG0680031431.01 | 0.825536 | 4.444277e-54 | 4.062106e-51 |
| MsG0280011305.01 | MsG0680031431.01 | 0.839178 | 1.850656e-57 | 2.535303e-54 |
| MsG0280011319.01 | MsG0680031431.01 | 0.816548 | 5.225087e-52 | 3.713386e-49 |
| MsG0280011339.01 | MsG0680031431.01 | 0.815570 | 8.638152e-52 | 5.977343e-49 |
| MsG0380012034.01 | MsG0680031431.01 | 0.800581 | 1.347529e-48 | 6.297385e-46 |
| MsG0380012067.01 | MsG0680031431.01 | 0.828071 | 1.101882e-54 | 1.083616e-51 |
| MsG0380012122.01 | MsG0680031431.01 | 0.800937 | 1.140192e-48 | 5.376860e-46 |
| MsG0380012460.01 | MsG0680031431.01 | 0.804889 | 1.738936e-49 | 9.072073e-47 |
| MsG0380013183.01 | MsG0680031431.01 | 0.819058 | 1.417354e-52 | 1.079295e-49 |
| MsG0380013363.01 | MsG0680031431.01 | 0.803339 | 3.655298e-49 | 1.832123e-46 |
| MsG0380013475.01 | MsG0680031431.01 | 0.827701 | 1.352884e-54 | 1.316045e-51 |
| MsG0380013549.01 | MsG0680031431.01 | 0.806424 | 8.282069e-50 | 4.493615e-47 |
| MsG0380014097.01 | MsG0680031431.01 | 0.825729 | 3.999004e-54 | 3.675442e-51 |
| MsG0380014468.01 | MsG0680031431.01 | 0.811819 | 5.785382e-51 | 3.617383e-48 |
| MsG0380014495.01 | MsG0680031431.01 | 0.842670 | 2.243906e-58 | 3.426735e-55 |
| MsG0380014537.01 | MsG0680031431.01 | 0.819153 | 1.348889e-52 | 1.029763e-49 |
| MsG0680030880.01 | MsG0680031431.01 | 0.821053 | 4.952752e-53 | 3.986808e-50 |
| MsG0680030881.01 | MsG0680031431.01 | 0.826783 | 2.244118e-54 | 2.125366e-51 |
| MsG0680030992.01 | MsG0680031431.01 | 0.805398 | 1.360921e-49 | 7.192542e-47 |
| MsG0680031360.01 | MsG0680031431.01 | 0.819064 | 1.413082e-52 | 1.076192e-49 |
| MsG0680031431.01 | MsG0680031488.01 | 0.818842 | 1.586930e-52 | 1.201264e-49 |
| MsG0680031431.01 | MsG0680031617.01 | 0.800090 | 1.696197e-48 | 7.828580e-46 |
| MsG0680031431.01 | MsG0680033412.01 | 0.806766 | 7.014311e-50 | 3.839265e-47 |
| MsG0680031431.01 | MsG0680034320.01 | 0.810984 | 8.782027e-51 | 5.372092e-48 |
| MsG0680031431.01 | MsG0680034739.01 | 0.816257 | 6.070989e-52 | 4.280768e-49 |
| MsG0680031431.01 | MsG0680035123.01 | 0.806155 | 9.435720e-50 | 5.084742e-47 |
| MsG0680031431.01 | MsG0680035475.01 | 0.804156 | 2.473302e-49 | 1.266038e-46 |
| MsG0680031431.01 | MsG0680035498.01 | 0.858001 | 1.111375e-62 | 2.795388e-59 |
| MsG0680031431.01 | MsG0680035580.01 | 0.849599 | 2.916194e-60 | 5.556950e-57 |
| MsG0680031431.01 | MsG0680035658.01 | 0.810180 | 1.309998e-50 | 7.842914e-48 |
| MsG0680031431.01 | MsG0780036297.01 | 0.813995 | 1.929622e-51 | 1.279270e-48 |
| MsG0680031431.01 | MsG0780036593.01 | 0.808049 | 3.747769e-50 | 2.121018e-47 |
| MsG0680031431.01 | MsG0780036602.01 | 0.830815 | 2.374522e-55 | 2.529681e-52 |
| MsG0680031431.01 | MsG0780036757.01 | 0.839512 | 1.516020e-57 | 2.098334e-54 |
| MsG0680031431.01 | MsG0780036766.01 | 0.801195 | 1.009706e-48 | 4.792523e-46 |
| MsG0680031431.01 | MsG0780037054.01 | 0.822867 | 1.882965e-53 | 1.595406e-50 |
| MsG0680031431.01 | MsG0780037093.01 | 0.830408 | 2.987220e-55 | 3.144487e-52 |
| MsG0680031431.01 | MsG0780037460.01 | 0.809852 | 1.541977e-50 | 9.153113e-48 |
| MsG0680031431.01 | MsG0780038188.01 | 0.805190 | 1.504639e-49 | 7.909693e-47 |
| MsG0680031431.01 | MsG0780038377.01 | 0.806778 | 6.971519e-50 | 3.817061e-47 |
| MsG0680031431.01 | MsG0780038378.01 | 0.848432 | 6.151570e-60 | 1.128744e-56 |
| MsG0680031431.01 | MsG0780038439.01 | 0.831368 | 1.736346e-55 | 1.880340e-52 |
| MsG0680031431.01 | MsG0780038691.01 | 0.836328 | 9.980165e-57 | 1.253745e-53 |
| MsG0680031431.01 | MsG0780038907.01 | 0.835674 | 1.462322e-56 | 1.800921e-53 |
| MsG0680031431.01 | MsG0780039170.01 | 0.811576 | 6.534423e-51 | 4.059531e-48 |
| MsG0680031431.01 | MsG0780039178.01 | 0.801857 | 7.386665e-49 | 3.565326e-46 |
| MsG0680031431.01 | MsG0780039257.01 | 0.811948 | 5.422092e-51 | 3.402063e-48 |
| MsG0680031431.01 | MsG0780039369.01 | 0.810519 | 1.107249e-50 | 6.688622e-48 |
| MsG0680031431.01 | MsG0780039443.01 | 0.835016 | 2.143922e-56 | 2.588640e-53 |
| MsG0680031431.01 | MsG0780039527.01 | 0.804098 | 2.542146e-49 | 1.299364e-46 |
| MsG0680031431.01 | MsG0780040074.01 | 0.811561 | 6.581962e-51 | 4.087590e-48 |
| MsG0680031431.01 | MsG0780041016.01 | 0.824419 | 8.154431e-54 | 7.218397e-51 |
| MsG0680031431.01 | MsG0780041229.01 | 0.806096 | 9.710572e-50 | 5.224825e-47 |
| MsG0680031431.01 | MsG0780041391.01 | 0.804123 | 2.512413e-49 | 1.284977e-46 |
| MsG0680031431.01 | MsG0780041416.01 | 0.812510 | 4.089234e-51 | 2.605018e-48 |
| MsG0680031431.01 | MsG0780041440.01 | 0.812769 | 3.587722e-51 | 2.301054e-48 |
| MsG0680031431.01 | MsG0780041475.01 | 0.801839 | 7.450545e-49 | 3.594472e-46 |
| MsG0680031431.01 | MsG0780041699.01 | 0.812853 | 3.439922e-51 | 2.211057e-48 |
| MsG0680031431.01 | MsG0880041861.01 | 0.818992 | 1.467178e-52 | 1.115315e-49 |
| MsG0680031431.01 | MsG0880041863.01 | 0.813989 | 1.935626e-51 | 1.283027e-48 |
| MsG0680031431.01 | MsG0880041986.01 | 0.803106 | 4.083377e-49 | 2.034487e-46 |
| MsG0680031431.01 | MsG0880042091.01 | 0.814637 | 1.392274e-51 | 9.392518e-49 |
| MsG0680031431.01 | MsG0880042311.01 | 0.822961 | 1.790268e-53 | 1.520855e-50 |
| MsG0680031431.01 | MsG0880042520.01 | 0.822809 | 1.941992e-53 | 1.642710e-50 |
| MsG0680031431.01 | MsG0880043157.01 | 0.815588 | 8.561163e-52 | 5.926881e-49 |
| MsG0680031431.01 | MsG0880043479.01 | 0.839034 | 2.016344e-57 | 2.750107e-54 |
| MsG0680031431.01 | MsG0880043480.01 | 0.840078 | 1.079637e-57 | 1.520989e-54 |
| MsG0680031431.01 | MsG0880043937.01 | 0.835414 | 1.702015e-56 | 2.079865e-53 |
| MsG0680031431.01 | MsG0880043941.01 | 0.823403 | 1.411094e-53 | 1.213687e-50 |
| MsG0680031431.01 | MsG0880043979.01 | 0.801279 | 9.705719e-49 | 4.616602e-46 |
| MsG0680031431.01 | MsG0880044067.01 | 0.825651 | 4.174230e-54 | 3.827891e-51 |
| MsG0680031431.01 | MsG0880044131.01 | 0.814469 | 1.516487e-51 | 1.018459e-48 |
| MsG0680031431.01 | MsG0880044782.01 | 0.833799 | 4.332738e-56 | 5.044354e-53 |
| MsG0680031431.01 | MsG0880045294.01 | 0.832836 | 7.531589e-56 | 8.518345e-53 |
| MsG0680031431.01 | MsG0880045453.01 | 0.821368 | 4.189746e-53 | 3.401968e-50 |
| MsG0680031431.01 | MsG0880045765.01 | 0.827621 | 1.413881e-54 | 1.372080e-51 |
| MsG0680031431.01 | MsG0880046333.01 | -0.811462 | 6.917905e-51 | 4.284978e-48 |
| MsG0680031431.01 | MsG0880047473.01 | 0.804009 | 2.653704e-49 | 1.353286e-46 |
| MsG0480018653.01 | MsG0680031431.01 | 0.832645 | 8.400851e-56 | 9.447958e-53 |
| MsG0480019350.01 | MsG0680031431.01 | 0.808791 | 2.604015e-50 | 1.502642e-47 |
| MsG0480019711.01 | MsG0680031431.01 | 0.800986 | 1.114296e-48 | 5.261465e-46 |
| MsG0480020739.01 | MsG0680031431.01 | 0.834745 | 2.509033e-56 | 3.004655e-53 |
| MsG0480020887.01 | MsG0680031431.01 | 0.812073 | 5.092239e-51 | 3.205969e-48 |
| MsG0480021056.01 | MsG0680031431.01 | 0.839665 | 1.382876e-57 | 1.923013e-54 |
| MsG0480021195.01 | MsG0680031431.01 | 0.802943 | 4.412596e-49 | 2.189441e-46 |
| MsG0480021280.01 | MsG0680031431.01 | 0.811810 | 5.812481e-51 | 3.633425e-48 |
| MsG0480021870.01 | MsG0680031431.01 | 0.803677 | 3.109820e-49 | 1.572336e-46 |
| MsG0480022686.01 | MsG0680031431.01 | -0.803056 | 4.183028e-49 | 2.081449e-46 |
| MsG0480022788.01 | MsG0680031431.01 | 0.813439 | 2.557893e-51 | 1.670525e-48 |
| MsG0480023163.01 | MsG0680031431.01 | 0.808627 | 2.822607e-50 | 1.621783e-47 |
| MsG0480023221.01 | MsG0680031431.01 | 0.823805 | 1.136254e-53 | 9.886423e-51 |
| MsG0480023400.01 | MsG0680031431.01 | -0.808889 | 2.480340e-50 | 1.435001e-47 |
| MsG0480023463.01 | MsG0680031431.01 | 0.828398 | 9.189833e-55 | 9.124196e-52 |
| MsG0480023488.01 | MsG0680031431.01 | 0.830288 | 3.196040e-55 | 3.352609e-52 |
| MsG0480023489.01 | MsG0680031431.01 | 0.803189 | 3.926014e-49 | 1.960354e-46 |
| MsG0480023601.01 | MsG0680031431.01 | 0.825744 | 3.966360e-54 | 3.647131e-51 |
| MsG0480023636.01 | MsG0680031431.01 | 0.821807 | 3.317536e-53 | 2.727360e-50 |
| MsG0580024197.01 | MsG0680031431.01 | 0.818454 | 1.943458e-52 | 1.455541e-49 |
| MsG0580024790.01 | MsG0680031431.01 | -0.822181 | 2.717424e-53 | 2.257747e-50 |
| MsG0580025332.01 | MsG0680031431.01 | 0.818993 | 1.466943e-52 | 1.115146e-49 |
| MsG0580025407.01 | MsG0680031431.01 | -0.813920 | 2.005094e-51 | 1.326587e-48 |
| MsG0580025723.01 | MsG0680031431.01 | 0.829003 | 6.564199e-55 | 6.632299e-52 |
| MsG0580025814.01 | MsG0680031431.01 | 0.819078 | 1.402475e-52 | 1.068504e-49 |
| MsG0580025816.01 | MsG0680031431.01 | 0.828857 | 7.121436e-55 | 7.164333e-52 |
| MsG0580025987.01 | MsG0680031431.01 | 0.853379 | 2.485220e-61 | 5.359135e-58 |
| MsG0380015196.01 | MsG0680031431.01 | 0.819448 | 1.155145e-52 | 8.891943e-50 |
| MsG0380015332.01 | MsG0680031431.01 | 0.831439 | 1.668508e-55 | 1.810655e-52 |
| MsG0380015555.01 | MsG0680031431.01 | 0.824469 | 7.937398e-54 | 7.036558e-51 |
| MsG0380015677.01 | MsG0680031431.01 | 0.803316 | 3.695476e-49 | 1.851175e-46 |
| MsG0380015944.01 | MsG0680031431.01 | 0.810337 | 1.212286e-50 | 7.287667e-48 |
| MsG0380016126.01 | MsG0680031431.01 | 0.801581 | 8.414516e-49 | 4.032963e-46 |
| MsG0380016247.01 | MsG0680031431.01 | 0.811211 | 7.841088e-51 | 4.824847e-48 |
| MsG0380016387.01 | MsG0680031431.01 | 0.804228 | 2.389279e-49 | 1.225237e-46 |
| MsG0380016407.01 | MsG0680031431.01 | 0.832917 | 7.190377e-56 | 8.152312e-53 |
| MsG0380016529.01 | MsG0680031431.01 | 0.805996 | 1.019010e-49 | 5.469229e-47 |
| MsG0380017244.01 | MsG0680031431.01 | 0.803222 | 3.863371e-49 | 1.930699e-46 |
| MsG0380017584.01 | MsG0680031431.01 | 0.803430 | 3.499171e-49 | 1.758043e-46 |
| MsG0380017589.01 | MsG0680031431.01 | 0.810311 | 1.227884e-50 | 7.376534e-48 |
| MsG0380018075.01 | MsG0680031431.01 | 0.813145 | 2.968165e-51 | 1.922822e-48 |
| MsG0480018183.01 | MsG0680031431.01 | 0.815162 | 1.064731e-51 | 7.285010e-49 |
| MsG0480018278.01 | MsG0680031431.01 | 0.818027 | 2.428519e-52 | 1.797305e-49 |
| MsG0580027091.01 | MsG0680031431.01 | 0.800346 | 1.504851e-48 | 6.990817e-46 |
| MsG0580027925.01 | MsG0680031431.01 | 0.820591 | 6.327344e-53 | 5.027299e-50 |
| MsG0580028148.01 | MsG0680031431.01 | 0.807631 | 4.600632e-50 | 2.575331e-47 |
| MsG0580028436.01 | MsG0680031431.01 | 0.800449 | 1.433841e-48 | 6.678130e-46 |
| MsG0580029236.01 | MsG0680031431.01 | 0.838231 | 3.251141e-57 | 4.326663e-54 |
| MsG0580029736.01 | MsG0680031431.01 | 0.817289 | 3.562290e-52 | 2.583614e-49 |
| MsG0580029925.01 | MsG0680031431.01 | 0.811831 | 5.751264e-51 | 3.597139e-48 |
| MsG0680030447.01 | MsG0680031431.01 | 0.801724 | 7.867447e-49 | 3.784325e-46 |
| MsG0280006567.01 | MsG0680031431.01 | 0.829923 | 3.922214e-55 | 4.071562e-52 |
| MsG0280006766.01 | MsG0680031431.01 | 0.802523 | 5.389180e-49 | 2.645465e-46 |
| MsG0280006993.01 | MsG0680031431.01 | 0.802871 | 4.566496e-49 | 2.261759e-46 |
| MsG0280007307.01 | MsG0680031431.01 | 0.806064 | 9.859859e-50 | 5.301042e-47 |
| MsG0280007506.01 | MsG0680031431.01 | 0.803498 | 3.387735e-49 | 1.705075e-46 |
| MsG0280007527.01 | MsG0680031431.01 | 0.803574 | 3.266799e-49 | 1.647495e-46 |
| MsG0280007547.01 | MsG0680031431.01 | 0.816272 | 6.024645e-52 | 4.249779e-49 |
| MsG0280007903.01 | MsG0680031431.01 | 0.803427 | 3.504127e-49 | 1.760411e-46 |
| MsG0280007955.01 | MsG0680031431.01 | 0.843582 | 1.282245e-58 | 2.015490e-55 |
| MsG0280008377.01 | MsG0680031431.01 | 0.815434 | 9.265407e-52 | 6.387317e-49 |
| MsG0280008390.01 | MsG0680031431.01 | 0.840527 | 8.239569e-58 | 1.176951e-54 |
| MsG0280008391.01 | MsG0680031431.01 | 0.835227 | 1.897491e-56 | 2.305913e-53 |
| MsG0280008392.01 | MsG0680031431.01 | 0.837204 | 5.967705e-57 | 7.695917e-54 |
| MsG0280008395.01 | MsG0680031431.01 | 0.845186 | 4.751543e-59 | 7.854146e-56 |
| MsG0280008866.01 | MsG0680031431.01 | 0.800197 | 1.613663e-48 | 7.467596e-46 |
| MsG0280009794.01 | MsG0680031431.01 | 0.834115 | 3.611605e-56 | 4.244662e-53 |
| MsG0280010349.01 | MsG0680031431.01 | 0.836329 | 9.974050e-57 | 1.253016e-53 |
| MsG0280010350.01 | MsG0680031431.01 | 0.807971 | 3.893990e-50 | 2.199268e-47 |
| MsG0280010366.01 | MsG0680031431.01 | 0.835308 | 1.809357e-56 | 2.204274e-53 |
| MsG0280010489.01 | MsG0680031431.01 | 0.867861 | 1.001813e-65 | 3.549888e-62 |
| MsG0280010517.01 | MsG0680031431.01 | 0.818138 | 2.292314e-52 | 1.701721e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0680031431.01 | MsG0080048329.01 | PPI |
| MsG0680031431.01 | MsG0480023626.01 | PPI |
| MsG0680031431.01 | MsG0580024400.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031431.01.T01 | MTR_6g022830 | 94.669 | 694 | 15 | 1 | 1 | 694 | 1 | 672 | 0.0 | 1348 |
| MsG0680031431.01.T01 | MTR_6g023070 | 92.038 | 628 | 17 | 2 | 67 | 694 | 15 | 609 | 0.0 | 1162 |
| MsG0680031431.01.T01 | MTR_8g080080 | 47.889 | 687 | 298 | 18 | 1 | 678 | 1 | 636 | 0.0 | 544 |
| MsG0680031431.01.T01 | MTR_3g085830 | 45.084 | 712 | 300 | 19 | 1 | 684 | 1 | 649 | 6.26e-177 | 520 |
| MsG0680031431.01.T01 | MTR_7g117620 | 28.313 | 332 | 176 | 11 | 75 | 401 | 17 | 291 | 2.20e-14 | 77.0 |
| MsG0680031431.01.T01 | MTR_4g062100 | 28.125 | 224 | 124 | 7 | 192 | 415 | 108 | 294 | 7.69e-13 | 72.0 |
| MsG0680031431.01.T01 | MTR_1g032100 | 27.273 | 275 | 153 | 8 | 174 | 424 | 37 | 288 | 3.49e-11 | 66.6 |
| MsG0680031431.01.T01 | MTR_2g096190 | 27.434 | 226 | 131 | 8 | 193 | 400 | 31 | 241 | 8.00e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031431.01.T01 | AT3G01750 | 52.080 | 697 | 279 | 16 | 1 | 682 | 1 | 657 | 0.0 | 624 |
| MsG0680031431.01.T01 | AT3G01750 | 52.080 | 697 | 279 | 16 | 1 | 682 | 1 | 657 | 0.0 | 624 |
| MsG0680031431.01.T01 | AT3G04140 | 41.890 | 709 | 309 | 20 | 1 | 684 | 1 | 631 | 2.22e-153 | 459 |
| MsG0680031431.01.T01 | AT2G31820 | 28.352 | 261 | 149 | 9 | 192 | 415 | 154 | 413 | 6.76e-13 | 72.4 |
| MsG0680031431.01.T01 | AT5G60070 | 29.839 | 248 | 121 | 10 | 194 | 437 | 113 | 311 | 2.36e-12 | 70.5 |
| MsG0680031431.01.T01 | AT3G12360 | 26.837 | 313 | 189 | 10 | 133 | 425 | 71 | 363 | 1.16e-11 | 68.6 |
| MsG0680031431.01.T01 | AT3G12360 | 26.837 | 313 | 189 | 10 | 133 | 425 | 59 | 351 | 1.20e-11 | 68.2 |
| MsG0680031431.01.T01 | AT4G10720 | 27.941 | 272 | 154 | 11 | 161 | 418 | 1 | 244 | 5.07e-11 | 65.9 |
| MsG0680031431.01.T01 | AT4G10720 | 27.941 | 272 | 154 | 11 | 161 | 418 | 1 | 244 | 8.39e-11 | 65.1 |
Find 110 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGAATTCTTCGATTTCT+TGG | 0.161238 | 6:+20362493 | None:intergenic |
| TTTCTCCACAAAGCTGTTTC+TGG | 0.173886 | 6:-20361360 | MsG0680031431.01.T01:CDS |
| GGGAAATTCCTTCTGCTTAT+AGG | 0.191842 | 6:-20362226 | MsG0680031431.01.T01:CDS |
| AAATTGTTCTGATGATATTT+TGG | 0.217140 | 6:-20362129 | MsG0680031431.01.T01:CDS |
| GAGCATTAACCGCTGATAAT+TGG | 0.259457 | 6:+20361436 | None:intergenic |
| TACAAGTAGAGGTGGGATTA+TGG | 0.277088 | 6:-20362261 | MsG0680031431.01.T01:CDS |
| GAATTTCTCTTAACCAATTT+CGG | 0.284326 | 6:+20360343 | None:intergenic |
| GCAAATCTCTTCTTAGCATT+AGG | 0.284435 | 6:+20360523 | None:intergenic |
| CAAATCTCTTCTTAGCATTA+GGG | 0.301052 | 6:+20360524 | None:intergenic |
| ATCCAATGATGAAGTTTCAT+TGG | 0.331920 | 6:-20360683 | MsG0680031431.01.T01:CDS |
| ATCTCAGCTGGTGGAATGTT+TGG | 0.334203 | 6:-20361048 | MsG0680031431.01.T01:CDS |
| TTAAGAGAAATTCTGTTAGA+AGG | 0.339910 | 6:-20360333 | MsG0680031431.01.T01:CDS |
| AAGGGTCATTATTTCTGTTT+CGG | 0.353990 | 6:-20360304 | MsG0680031431.01.T01:CDS |
| GGGATTATGGAAGAAAATAT+TGG | 0.355564 | 6:-20362248 | MsG0680031431.01.T01:CDS |
| ACAAAAGAACACTTTCTGTT+AGG | 0.359130 | 6:-20360561 | MsG0680031431.01.T01:CDS |
| ATATCTGAATTCGATGAATT+CGG | 0.363865 | 6:+20361087 | None:intergenic |
| TCTTGAGAGGAATCCTTTGT+TGG | 0.364285 | 6:-20362396 | MsG0680031431.01.T01:CDS |
| TGCTTATTATCAATTGATCT+AGG | 0.375333 | 6:+20360451 | None:intergenic |
| TTTCTATGAGAGATTAATGT+TGG | 0.395639 | 6:+20361399 | None:intergenic |
| CGACTTGTCGGTCAAGTCTT+CGG | 0.396104 | 6:+20361319 | None:intergenic |
| GGATTATGGAAGAAAATATT+GGG | 0.405458 | 6:-20362247 | MsG0680031431.01.T01:CDS |
| TCACTTCCCTACGCCGAATC+AGG | 0.406153 | 6:-20362613 | MsG0680031431.01.T01:CDS |
| ATCAATTGATAATAAGCAAA+AGG | 0.410363 | 6:-20360446 | MsG0680031431.01.T01:CDS |
| AATAATGACGATATTGTTGC+TGG | 0.418310 | 6:-20360412 | MsG0680031431.01.T01:CDS |
| GGTATGCATCACCGATAGAT+TGG | 0.420212 | 6:-20362706 | MsG0680031431.01.T01:CDS |
| TGATGATGAGACACCGAAAT+TGG | 0.423038 | 6:-20360356 | MsG0680031431.01.T01:CDS |
| TATTTCTGTTTCGGTGCACC+TGG | 0.423063 | 6:-20360295 | MsG0680031431.01.T01:CDS |
| ATCCAATGAAACTTCATCAT+TGG | 0.426190 | 6:+20360681 | None:intergenic |
| AAGAATTCTTTGATCAAGTC+AGG | 0.426379 | 6:-20362482 | MsG0680031431.01.T01:CDS |
| CTCAACATATGTGATGTTCA+TGG | 0.426668 | 6:-20361141 | MsG0680031431.01.T01:CDS |
| CAACGAAGAGGAAAATTTGT+TGG | 0.433564 | 6:+20362752 | None:intergenic |
| GCACTTCATATGGCAATCAT+AGG | 0.435629 | 6:-20361216 | MsG0680031431.01.T01:CDS |
| TAAGCCACGGCAACAAAACT+AGG | 0.455876 | 6:+20360244 | None:intergenic |
| CATTTGAGAATGCAAAGTAT+TGG | 0.456293 | 6:-20360988 | MsG0680031431.01.T01:CDS |
| GAAAACCAGAAACAGCTTTG+TGG | 0.460960 | 6:+20361355 | None:intergenic |
| AATTCCTTCTGCTTATAGGT+TGG | 0.463912 | 6:-20362222 | MsG0680031431.01.T01:CDS |
| ATCAAGAAATTGATCTCAGC+TGG | 0.465918 | 6:-20361060 | MsG0680031431.01.T01:CDS |
| TGGAAGAACAGCACTTCATA+TGG | 0.470812 | 6:-20361226 | MsG0680031431.01.T01:CDS |
| ATCAACATCAAGAACAATGA+TGG | 0.471584 | 6:-20361246 | MsG0680031431.01.T01:CDS |
| TTTCACGAACCAAGTCATAA+TGG | 0.471725 | 6:+20362669 | None:intergenic |
| TACTAGCAAAAGGCCAAGTT+CGG | 0.475921 | 6:-20360791 | MsG0680031431.01.T01:CDS |
| CCACTTCCAGACGCCTGATT+CGG | 0.478800 | 6:+20362600 | None:intergenic |
| CCGAATCAGGCGTCTGGAAG+TGG | 0.484422 | 6:-20362600 | MsG0680031431.01.T01:CDS |
| GTATGCATCACCGATAGATT+GGG | 0.489724 | 6:-20362705 | MsG0680031431.01.T01:CDS |
| CATCATCGTGGTGGAATCGT+TGG | 0.495201 | 6:-20360886 | MsG0680031431.01.T01:CDS |
| TCAATTGATAATAAGCAAAA+GGG | 0.495816 | 6:-20360445 | MsG0680031431.01.T01:CDS |
| GCTGCATAATTAACCGAACT+TGG | 0.496926 | 6:+20360778 | None:intergenic |
| TTGAACAAAGTTGAAGTCTC+CGG | 0.501107 | 6:+20362424 | None:intergenic |
| CCTACGCCGAATCAGGCGTC+TGG | 0.501158 | 6:-20362606 | MsG0680031431.01.T01:CDS |
| ATGTACACGGCTGCATCAGC+CGG | 0.503217 | 6:-20362443 | MsG0680031431.01.T01:CDS |
| TTGCATGCAGCTGCAGCAAG+AGG | 0.504480 | 6:-20362077 | MsG0680031431.01.T01:CDS |
| TTCTGTTAGAAGGAAGTTGA+AGG | 0.511843 | 6:-20360323 | MsG0680031431.01.T01:CDS |
| GTTCATGAATCTCAAAATGC+AGG | 0.514967 | 6:-20361547 | MsG0680031431.01.T01:CDS |
| AAGATTTGAAATTTCGTGCC+GGG | 0.519401 | 6:+20360958 | None:intergenic |
| CCTCTTCGTTGGGAGAGTAC+CGG | 0.524023 | 6:-20362740 | MsG0680031431.01.T01:CDS |
| CCTCTACTTGTAACAAATCT+CGG | 0.526442 | 6:+20362272 | None:intergenic |
| GGTGTCTCATCATCATCATA+AGG | 0.528953 | 6:+20360364 | None:intergenic |
| TCTTTGATCAAGTCAGGCTA+TGG | 0.530610 | 6:-20362476 | MsG0680031431.01.T01:CDS |
| TTTGTGGAGAAAAGTTTCTC+CGG | 0.530803 | 6:+20361371 | None:intergenic |
| CGAAGAGGAAAATTTGTTGG+AGG | 0.532078 | 6:+20362755 | None:intergenic |
| TTAGCTGCGGCCCAATCTAT+CGG | 0.532635 | 6:+20362695 | None:intergenic |
| CAGACGCCTGATTCGGCGTA+GGG | 0.533144 | 6:+20362607 | None:intergenic |
| AACGAGTAATTCATCTTCAT+CGG | 0.533622 | 6:-20360863 | MsG0680031431.01.T01:CDS |
| TTGTTCAAATTCTTCTTGAG+AGG | 0.533631 | 6:-20362409 | MsG0680031431.01.T01:CDS |
| TACAGTCTATTTGAGTCTCA+TGG | 0.538055 | 6:-20361582 | MsG0680031431.01.T01:intron |
| CAAAGTATTGGAAGTAGTCC+CGG | 0.542869 | 6:-20360976 | MsG0680031431.01.T01:CDS |
| CCGAGATTTGTTACAAGTAG+AGG | 0.544674 | 6:-20362272 | MsG0680031431.01.T01:CDS |
| TTGATCAAGTCAGGCTATGG+TGG | 0.545204 | 6:-20362473 | MsG0680031431.01.T01:CDS |
| TTGGCTTATAGAGATGCTGA+TGG | 0.546563 | 6:-20362110 | MsG0680031431.01.T01:CDS |
| TCGGTGATGCATACCACCAT+TGG | 0.546778 | 6:+20362714 | None:intergenic |
| CAGTTTCAACTACTAGCAAA+AGG | 0.547071 | 6:-20360801 | MsG0680031431.01.T01:CDS |
| AGCTAACGGCCATTATGACT+TGG | 0.551217 | 6:-20362678 | MsG0680031431.01.T01:CDS |
| CAGGCGTCTGGAAGTGGTGT+GGG | 0.553479 | 6:-20362594 | MsG0680031431.01.T01:CDS |
| ATAGATTGGGCCGCAGCTAA+CGG | 0.553896 | 6:-20362692 | MsG0680031431.01.T01:CDS |
| GCTGTTCATGCTGCTGCTAG+AGG | 0.556808 | 6:-20362185 | MsG0680031431.01.T01:CDS |
| ATCAACTCAACAGATGATCA+AGG | 0.560248 | 6:-20361492 | MsG0680031431.01.T01:CDS |
| AAGAAATTGATCTCAGCTGG+TGG | 0.578703 | 6:-20361057 | MsG0680031431.01.T01:CDS |
| TGCATACCACCATTGGTCAC+CGG | 0.578751 | 6:+20362721 | None:intergenic |
| AGATTTGTTACAAGTAGAGG+TGG | 0.579667 | 6:-20362269 | MsG0680031431.01.T01:CDS |
| TCAAGTCAGGCTATGGTGGA+TGG | 0.580199 | 6:-20362469 | MsG0680031431.01.T01:CDS |
| CCAGACGCCTGATTCGGCGT+AGG | 0.584492 | 6:+20362606 | None:intergenic |
| GTCATAATGGCCGTTAGCTG+CGG | 0.586447 | 6:+20362682 | None:intergenic |
| TGTTGAGTTGATTATGTCAA+AGG | 0.589413 | 6:+20361503 | None:intergenic |
| TAAGATTTGAAATTTCGTGC+CGG | 0.591666 | 6:+20360957 | None:intergenic |
| GGGAGAGTACCGGTGACCAA+TGG | 0.592124 | 6:-20362730 | MsG0680031431.01.T01:CDS |
| ATTTCCAACCTATAAGCAGA+AGG | 0.601013 | 6:+20362218 | None:intergenic |
| GATTTGTTACAAGTAGAGGT+GGG | 0.601343 | 6:-20362268 | MsG0680031431.01.T01:CDS |
| ATATACTTTATGCTGCTGCT+AGG | 0.602966 | 6:-20362343 | MsG0680031431.01.T01:CDS |
| TTCTACATGAAAGTGATCTG+TGG | 0.604183 | 6:+20361275 | None:intergenic |
| TCTGTTAGAAGGAAGTTGAA+GGG | 0.605359 | 6:-20360322 | MsG0680031431.01.T01:CDS |
| TCAGGCGTCTGGAAGTGGTG+TGG | 0.609880 | 6:-20362595 | MsG0680031431.01.T01:CDS |
| AGTCGTTGATTCAAGCAAGA+TGG | 0.618755 | 6:+20360388 | None:intergenic |
| CCTTCACCGAAAACCAACAA+AGG | 0.619616 | 6:+20362383 | None:intergenic |
| TGGTGGATGGCTAATGTACA+CGG | 0.625072 | 6:-20362456 | MsG0680031431.01.T01:CDS |
| TTATGTCAAAGGATGATGCT+AGG | 0.625607 | 6:+20361514 | None:intergenic |
| ATCTCTCATAGAAACAACGC+CGG | 0.637369 | 6:-20361390 | MsG0680031431.01.T01:CDS |
| TTGTCAAATCATCATCGTGG+TGG | 0.638549 | 6:-20360895 | MsG0680031431.01.T01:CDS |
| AGAGTACCGGTGACCAATGG+TGG | 0.638604 | 6:-20362727 | MsG0680031431.01.T01:CDS |
| TTACATGTAGCTGCTTCGAG+AGG | 0.644456 | 6:-20361459 | MsG0680031431.01.T01:CDS |
| TGCAGCAAGAGGGAAAGTTG+AGG | 0.645161 | 6:-20362066 | MsG0680031431.01.T01:CDS |
| TGCATGCAGCTGCAGCAAGA+GGG | 0.645560 | 6:-20362076 | MsG0680031431.01.T01:CDS |
| CCGGTACTCTCCCAACGAAG+AGG | 0.645560 | 6:+20362740 | None:intergenic |
| GTTCATGCTGCTGCTAGAGG+TGG | 0.645816 | 6:-20362182 | MsG0680031431.01.T01:CDS |
| CATATGTTGAGATTTATGAA+AGG | 0.646086 | 6:+20361153 | None:intergenic |
| CATGAATCTCAAAATGCAGG+TGG | 0.651110 | 6:-20361544 | MsG0680031431.01.T01:CDS |
| ACCGCATCCCGATTAAGCCA+CGG | 0.654756 | 6:+20360231 | None:intergenic |
| GATTATGGAAGAAAATATTG+GGG | 0.658092 | 6:-20362246 | MsG0680031431.01.T01:CDS |
| GAATTCTTCACATTAAGACC+AGG | 0.663718 | 6:+20360277 | None:intergenic |
| TTCGAGAGGCCAATTATCAG+CGG | 0.663788 | 6:-20361445 | MsG0680031431.01.T01:CDS |
| GTATTGTCAAATCATCATCG+TGG | 0.776230 | 6:-20360898 | MsG0680031431.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAAATTATAAAGTTTTGTT+TGG | - | Chr6:20361006-20361025 | MsG0680031431.01.T01:CDS | 15.0% |
| !! | GTAATATCGTAATCAAATTA+AGG | - | Chr6:20361160-20361179 | MsG0680031431.01.T01:CDS | 20.0% |
| !!! | AAATTGTTCTGATGATATTT+TGG | - | Chr6:20360872-20360891 | MsG0680031431.01.T01:CDS | 20.0% |
| !!! | AATTCATCATAGATGAATTT+TGG | - | Chr6:20361098-20361117 | MsG0680031431.01.T01:CDS | 20.0% |
| !!! | ATCAATTGATAATAAGCAAA+AGG | - | Chr6:20362555-20362574 | MsG0680031431.01.T01:CDS | 20.0% |
| !!! | TCAATTGATAATAAGCAAAA+GGG | - | Chr6:20362556-20362575 | MsG0680031431.01.T01:CDS | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | + | Chr6:20361292-20361311 | None:intergenic | 20.0% |
| ! | ATATCTGAATTCGATGAATT+CGG | + | Chr6:20361917-20361936 | None:intergenic | 25.0% |
| ! | CATATGTTGAGATTTATGAA+AGG | + | Chr6:20361851-20361870 | None:intergenic | 25.0% |
| ! | GAATTTCTCTTAACCAATTT+CGG | + | Chr6:20362661-20362680 | None:intergenic | 25.0% |
| ! | GATTATGGAAGAAAATATTG+GGG | - | Chr6:20360755-20360774 | MsG0680031431.01.T01:CDS | 25.0% |
| ! | GGATTATGGAAGAAAATATT+GGG | - | Chr6:20360754-20360773 | MsG0680031431.01.T01:CDS | 25.0% |
| ! | TCTCTTATAGTAAAGTAGTA+TGG | - | Chr6:20360962-20360981 | MsG0680031431.01.T01:CDS | 25.0% |
| ! | TGCTTATTATCAATTGATCT+AGG | + | Chr6:20362553-20362572 | None:intergenic | 25.0% |
| ! | TTAAGAGAAATTCTGTTAGA+AGG | - | Chr6:20362668-20362687 | MsG0680031431.01.T01:CDS | 25.0% |
| ! | TTTCTATGAGAGATTAATGT+TGG | + | Chr6:20361605-20361624 | None:intergenic | 25.0% |
| !! | ACTTAGACAAAGATTTTCTT+CGG | - | Chr6:20362390-20362409 | MsG0680031431.01.T01:CDS | 25.0% |
| !! | CTTTCAATTTTCTTCTCTTT+TGG | + | Chr6:20362286-20362305 | None:intergenic | 25.0% |
| !! | TGGTAATTTGAAGATTTTAG+AGG | - | Chr6:20360839-20360858 | MsG0680031431.01.T01:CDS | 25.0% |
| !!! | AGTGAAATATTTTTGTACAC+CGG | - | Chr6:20362070-20362089 | MsG0680031431.01.T01:CDS | 25.0% |
| !!! | ATGAATTCGGATTTTGTTTA+AGG | + | Chr6:20361904-20361923 | None:intergenic | 25.0% |
| !!! | TAAGGTTTTAAAGAATAGAC+CGG | - | Chr6:20361178-20361197 | MsG0680031431.01.T01:CDS | 25.0% |
| !!! | TTTTCATTGGTTGATTCATA+TGG | + | Chr6:20362172-20362191 | None:intergenic | 25.0% |
| !!! | TTTTGTTTAAGGTAATCAAG+TGG | + | Chr6:20361893-20361912 | None:intergenic | 25.0% |
| AACGAGTAATTCATCTTCAT+CGG | - | Chr6:20362138-20362157 | MsG0680031431.01.T01:CDS | 30.0% | |
| AAGAATTCTTTGATCAAGTC+AGG | - | Chr6:20360519-20360538 | MsG0680031431.01.T01:CDS | 30.0% | |
| AATAATGACGATATTGTTGC+TGG | - | Chr6:20362589-20362608 | MsG0680031431.01.T01:CDS | 30.0% | |
| ACAAAAGAACACTTTCTGTT+AGG | - | Chr6:20362440-20362459 | MsG0680031431.01.T01:CDS | 30.0% | |
| ATCAACATCAAGAACAATGA+TGG | - | Chr6:20361755-20361774 | MsG0680031431.01.T01:intron | 30.0% | |
| ATCCAATGAAACTTCATCAT+TGG | + | Chr6:20362323-20362342 | None:intergenic | 30.0% | |
| ATCCAATGATGAAGTTTCAT+TGG | - | Chr6:20362318-20362337 | MsG0680031431.01.T01:CDS | 30.0% | |
| CAAAGAATTCTTCGATTTCT+TGG | + | Chr6:20360511-20360530 | None:intergenic | 30.0% | |
| CAAATCTCTTCTTAGCATTA+GGG | + | Chr6:20362480-20362499 | None:intergenic | 30.0% | |
| CATTTGAGAATGCAAAGTAT+TGG | - | Chr6:20362013-20362032 | MsG0680031431.01.T01:intron | 30.0% | |
| GGGATTATGGAAGAAAATAT+TGG | - | Chr6:20360753-20360772 | MsG0680031431.01.T01:CDS | 30.0% | |
| TTCAGTGTAATTATGTGTGT+CGG | - | Chr6:20361317-20361336 | MsG0680031431.01.T01:CDS | 30.0% | |
| TTGTTCAAATTCTTCTTGAG+AGG | - | Chr6:20360592-20360611 | MsG0680031431.01.T01:CDS | 30.0% | |
| ! | AACAAATTTTCCTCTTCGTT+GGG | - | Chr6:20360251-20360270 | MsG0680031431.01.T01:CDS | 30.0% |
| ! | AACTGGGATAGAATTTTCAT+TGG | + | Chr6:20362185-20362204 | None:intergenic | 30.0% |
| ! | TAAGATTTGAAATTTCGTGC+CGG | + | Chr6:20362047-20362066 | None:intergenic | 30.0% |
| ! | TGACAATACATTTTCGATTC+CGG | + | Chr6:20362092-20362111 | None:intergenic | 30.0% |
| ! | TTTTGCTAGTAGTTGAAACT+GGG | + | Chr6:20362201-20362220 | None:intergenic | 30.0% |
| !! | AAGGGTCATTATTTCTGTTT+CGG | - | Chr6:20362697-20362716 | MsG0680031431.01.T01:CDS | 30.0% |
| !! | AGTTGAAAAAAGCACTTCAT+TGG | - | Chr6:20362251-20362270 | MsG0680031431.01.T01:CDS | 30.0% |
| !! | ATCATAGATGAATTTTGGTG+TGG | - | Chr6:20361103-20361122 | MsG0680031431.01.T01:CDS | 30.0% |
| !! | TGTTGAGTTGATTATGTCAA+AGG | + | Chr6:20361501-20361520 | None:intergenic | 30.0% |
| !!! | GAAAGTGTTCTTTTGTTGTT+TGG | + | Chr6:20362436-20362455 | None:intergenic | 30.0% |
| AATTCCTTCTGCTTATAGGT+TGG | - | Chr6:20360779-20360798 | MsG0680031431.01.T01:CDS | 35.0% | |
| ATATACTTTATGCTGCTGCT+AGG | - | Chr6:20360658-20360677 | MsG0680031431.01.T01:CDS | 35.0% | |
| ATCAACTCAACAGATGATCA+AGG | - | Chr6:20361509-20361528 | MsG0680031431.01.T01:CDS | 35.0% | |
| ATCAAGAAATTGATCTCAGC+TGG | - | Chr6:20361941-20361960 | MsG0680031431.01.T01:intron | 35.0% | |
| ATTTCCAACCTATAAGCAGA+AGG | + | Chr6:20360786-20360805 | None:intergenic | 35.0% | |
| CAACGAAGAGGAAAATTTGT+TGG | + | Chr6:20360252-20360271 | None:intergenic | 35.0% | |
| CAGTTTCAACTACTAGCAAA+AGG | - | Chr6:20362200-20362219 | MsG0680031431.01.T01:CDS | 35.0% | |
| CCTCTACTTGTAACAAATCT+CGG | + | Chr6:20360732-20360751 | None:intergenic | 35.0% | |
| CTCAACATATGTGATGTTCA+TGG | - | Chr6:20361860-20361879 | MsG0680031431.01.T01:intron | 35.0% | |
| GAATTCTTCACATTAAGACC+AGG | + | Chr6:20362727-20362746 | None:intergenic | 35.0% | |
| GCAAATCTCTTCTTAGCATT+AGG | + | Chr6:20362481-20362500 | None:intergenic | 35.0% | |
| GTATTGTCAAATCATCATCG+TGG | - | Chr6:20362103-20362122 | MsG0680031431.01.T01:CDS | 35.0% | |
| GTTCATGAATCTCAAAATGC+AGG | - | Chr6:20361454-20361473 | MsG0680031431.01.T01:CDS | 35.0% | |
| TACAGTCTATTTGAGTCTCA+TGG | - | Chr6:20361419-20361438 | MsG0680031431.01.T01:CDS | 35.0% | |
| TCTGTTAGAAGGAAGTTGAA+GGG | - | Chr6:20362679-20362698 | MsG0680031431.01.T01:CDS | 35.0% | |
| TTATGTCAAAGGATGATGCT+AGG | + | Chr6:20361490-20361509 | None:intergenic | 35.0% | |
| TTCTACATGAAAGTGATCTG+TGG | + | Chr6:20361729-20361748 | None:intergenic | 35.0% | |
| TTCTGTTAGAAGGAAGTTGA+AGG | - | Chr6:20362678-20362697 | MsG0680031431.01.T01:CDS | 35.0% | |
| TTGAACAAAGTTGAAGTCTC+CGG | + | Chr6:20360580-20360599 | None:intergenic | 35.0% | |
| TTTCACGAACCAAGTCATAA+TGG | + | Chr6:20360335-20360354 | None:intergenic | 35.0% | |
| TTTGATATGAAGCACGGATA+CGG | - | Chr6:20361232-20361251 | MsG0680031431.01.T01:CDS | 35.0% | |
| TTTGTGGAGAAAAGTTTCTC+CGG | + | Chr6:20361633-20361652 | None:intergenic | 35.0% | |
| ! | AAGATTTGAAATTTCGTGCC+GGG | + | Chr6:20362046-20362065 | None:intergenic | 35.0% |
| ! | CAACAAATTTTCCTCTTCGT+TGG | - | Chr6:20360250-20360269 | MsG0680031431.01.T01:CDS | 35.0% |
| ! | CTTTTGCTAGTAGTTGAAAC+TGG | + | Chr6:20362202-20362221 | None:intergenic | 35.0% |
| !! | AGATTTGTTACAAGTAGAGG+TGG | - | Chr6:20360732-20360751 | MsG0680031431.01.T01:CDS | 35.0% |
| !! | GATTTGTTACAAGTAGAGGT+GGG | - | Chr6:20360733-20360752 | MsG0680031431.01.T01:CDS | 35.0% |
| !! | TTTTCAAAAGCTCGACTTGT+CGG | + | Chr6:20361697-20361716 | None:intergenic | 35.0% |
| !!! | AGGAATCCTTTGTTGGTTTT+CGG | - | Chr6:20360612-20360631 | MsG0680031431.01.T01:CDS | 35.0% |
| AAGAAATTGATCTCAGCTGG+TGG | - | Chr6:20361944-20361963 | MsG0680031431.01.T01:intron | 40.0% | |
| ACTGAGATCAAAGTGAAGCA+TGG | + | Chr6:20361394-20361413 | None:intergenic | 40.0% | |
| ATCTCTCATAGAAACAACGC+CGG | - | Chr6:20361611-20361630 | MsG0680031431.01.T01:intron | 40.0% | |
| CATGAATCTCAAAATGCAGG+TGG | - | Chr6:20361457-20361476 | MsG0680031431.01.T01:CDS | 40.0% | |
| GAAAACCAGAAACAGCTTTG+TGG | + | Chr6:20361649-20361668 | None:intergenic | 40.0% | |
| GAGCATTAACCGCTGATAAT+TGG | + | Chr6:20361568-20361587 | None:intergenic | 40.0% | |
| GCACTTCATATGGCAATCAT+AGG | - | Chr6:20361785-20361804 | MsG0680031431.01.T01:intron | 40.0% | |
| GCTGCATAATTAACCGAACT+TGG | + | Chr6:20362226-20362245 | None:intergenic | 40.0% | |
| GGGAAATTCCTTCTGCTTAT+AGG | - | Chr6:20360775-20360794 | MsG0680031431.01.T01:CDS | 40.0% | |
| GGTGTCTCATCATCATCATA+AGG | + | Chr6:20362640-20362659 | None:intergenic | 40.0% | |
| GTATGCATCACCGATAGATT+GGG | - | Chr6:20360296-20360315 | MsG0680031431.01.T01:CDS | 40.0% | |
| TACAAGTAGAGGTGGGATTA+TGG | - | Chr6:20360740-20360759 | MsG0680031431.01.T01:CDS | 40.0% | |
| TACTAGCAAAAGGCCAAGTT+CGG | - | Chr6:20362210-20362229 | MsG0680031431.01.T01:CDS | 40.0% | |
| TCTCAAATTATTAGCGGCGT+CGG | + | Chr6:20361286-20361305 | None:intergenic | 40.0% | |
| TCTTGAGAGGAATCCTTTGT+TGG | - | Chr6:20360605-20360624 | MsG0680031431.01.T01:CDS | 40.0% | |
| TCTTTGATCAAGTCAGGCTA+TGG | - | Chr6:20360525-20360544 | MsG0680031431.01.T01:CDS | 40.0% | |
| TGGAAGAACAGCACTTCATA+TGG | - | Chr6:20361775-20361794 | MsG0680031431.01.T01:intron | 40.0% | |
| TTGGCTTATAGAGATGCTGA+TGG | - | Chr6:20360891-20360910 | MsG0680031431.01.T01:CDS | 40.0% | |
| TTGTCAAATCATCATCGTGG+TGG | - | Chr6:20362106-20362125 | MsG0680031431.01.T01:CDS | 40.0% | |
| ! | GTTTTCGGTGAAGGAGAATA+TGG | - | Chr6:20360627-20360646 | MsG0680031431.01.T01:CDS | 40.0% |
| ! | TGATGATGAGACACCGAAAT+TGG | - | Chr6:20362645-20362664 | MsG0680031431.01.T01:CDS | 40.0% |
| ! | TTTCTCCACAAAGCTGTTTC+TGG | - | Chr6:20361641-20361660 | MsG0680031431.01.T01:intron | 40.0% |
| !! | AGTCGTTGATTCAAGCAAGA+TGG | + | Chr6:20362616-20362635 | None:intergenic | 40.0% |
| !! | CAAAGTATTGGAAGTAGTCC+CGG | - | Chr6:20362025-20362044 | MsG0680031431.01.T01:intron | 40.0% |
| !! | CCGAGATTTGTTACAAGTAG+AGG | - | Chr6:20360729-20360748 | MsG0680031431.01.T01:CDS | 40.0% |
| !! | CGAAGAGGAAAATTTGTTGG+AGG | + | Chr6:20360249-20360268 | None:intergenic | 40.0% |
| !! | GGTTGGTTTGATATGAAGCA+CGG | - | Chr6:20361226-20361245 | MsG0680031431.01.T01:CDS | 40.0% |
| !!! | GGTGGAATGTTTGGTTTTAG+AGG | - | Chr6:20361962-20361981 | MsG0680031431.01.T01:intron | 40.0% |
| !!! | TAAACCTAGTTTTGTTGCCG+TGG | - | Chr6:20362753-20362772 | MsG0680031431.01.T01:CDS | 40.0% |
| AGCTAACGGCCATTATGACT+TGG | - | Chr6:20360323-20360342 | MsG0680031431.01.T01:CDS | 45.0% | |
| ATCTCAGCTGGTGGAATGTT+TGG | - | Chr6:20361953-20361972 | MsG0680031431.01.T01:intron | 45.0% | |
| CCTTCACCGAAAACCAACAA+AGG | + | Chr6:20360621-20360640 | None:intergenic | 45.0% | |
| GGTATGCATCACCGATAGAT+TGG | - | Chr6:20360295-20360314 | MsG0680031431.01.T01:CDS | 45.0% | |
| TAAGCCACGGCAACAAAACT+AGG | + | Chr6:20362760-20362779 | None:intergenic | 45.0% | |
| TTACATGTAGCTGCTTCGAG+AGG | - | Chr6:20361542-20361561 | MsG0680031431.01.T01:CDS | 45.0% | |
| TTCGAGAGGCCAATTATCAG+CGG | - | Chr6:20361556-20361575 | MsG0680031431.01.T01:CDS | 45.0% | |
| TTGATCAAGTCAGGCTATGG+TGG | - | Chr6:20360528-20360547 | MsG0680031431.01.T01:CDS | 45.0% | |
| ! | TATTTCTGTTTCGGTGCACC+TGG | - | Chr6:20362706-20362725 | MsG0680031431.01.T01:CDS | 45.0% |
| ! | TGGTGGATGGCTAATGTACA+CGG | - | Chr6:20360545-20360564 | MsG0680031431.01.T01:CDS | 45.0% |
| !!! | CCTTTGTTGGTTTTCGGTGA+AGG | - | Chr6:20360618-20360637 | MsG0680031431.01.T01:CDS | 45.0% |
| ACCAGAAACCGGCTGTTTGT+CGG | - | Chr6:20361205-20361224 | MsG0680031431.01.T01:CDS | 50.0% | |
| AGACCGGTTGAACCAGAAAC+CGG | - | Chr6:20361194-20361213 | MsG0680031431.01.T01:CDS | 50.0% | |
| AGTGAAGCATGGACACTCCT+CGG | + | Chr6:20361383-20361402 | None:intergenic | 50.0% | |
| ATACGGACACAGACACGACA+CGG | - | Chr6:20361249-20361268 | MsG0680031431.01.T01:CDS | 50.0% | |
| ATAGATTGGGCCGCAGCTAA+CGG | - | Chr6:20360309-20360328 | MsG0680031431.01.T01:CDS | 50.0% | |
| CAAACCAACCGACAAACAGC+CGG | + | Chr6:20361216-20361235 | None:intergenic | 50.0% | |
| CGACTTGTCGGTCAAGTCTT+CGG | + | Chr6:20361685-20361704 | None:intergenic | 50.0% | |
| GTCATAATGGCCGTTAGCTG+CGG | + | Chr6:20360322-20360341 | None:intergenic | 50.0% | |
| TCGGTGATGCATACCACCAT+TGG | + | Chr6:20360290-20360309 | None:intergenic | 50.0% | |
| TGCAGCAAGAGGGAAAGTTG+AGG | - | Chr6:20360935-20360954 | MsG0680031431.01.T01:CDS | 50.0% | |
| TGCATACCACCATTGGTCAC+CGG | + | Chr6:20360283-20360302 | None:intergenic | 50.0% | |
| TTAGCTGCGGCCCAATCTAT+CGG | + | Chr6:20360309-20360328 | None:intergenic | 50.0% | |
| ! | CATCATCGTGGTGGAATCGT+TGG | - | Chr6:20362115-20362134 | MsG0680031431.01.T01:CDS | 50.0% |
| ! | TCAAGTCAGGCTATGGTGGA+TGG | - | Chr6:20360532-20360551 | MsG0680031431.01.T01:CDS | 50.0% |
| !! | TATGTGTGTCGGTGTCGTGT+CGG | - | Chr6:20361328-20361347 | MsG0680031431.01.T01:CDS | 50.0% |
| ATGTACACGGCTGCATCAGC+CGG | - | Chr6:20360558-20360577 | MsG0680031431.01.T01:CDS | 55.0% | |
| CCACTTCCAGACGCCTGATT+CGG | + | Chr6:20360404-20360423 | None:intergenic | 55.0% | |
| GAAACCGGCTGTTTGTCGGT+TGG | - | Chr6:20361209-20361228 | MsG0680031431.01.T01:CDS | 55.0% | |
| GCATGGACACTCCTCGGATT+AGG | + | Chr6:20361377-20361396 | None:intergenic | 55.0% | |
| GCTGTTCATGCTGCTGCTAG+AGG | - | Chr6:20360816-20360835 | MsG0680031431.01.T01:CDS | 55.0% | |
| GTTCATGCTGCTGCTAGAGG+TGG | - | Chr6:20360819-20360838 | MsG0680031431.01.T01:CDS | 55.0% | |
| TCACTTCCCTACGCCGAATC+AGG | - | Chr6:20360388-20360407 | MsG0680031431.01.T01:CDS | 55.0% | |
| TGCATGCAGCTGCAGCAAGA+GGG | - | Chr6:20360925-20360944 | MsG0680031431.01.T01:CDS | 55.0% | |
| TTGCATGCAGCTGCAGCAAG+AGG | - | Chr6:20360924-20360943 | MsG0680031431.01.T01:CDS | 55.0% | |
| ! | ACCGACAAACAGCCGGTTTC+TGG | + | Chr6:20361209-20361228 | None:intergenic | 55.0% |
| ! | CCTCTTCGTTGGGAGAGTAC+CGG | - | Chr6:20360261-20360280 | MsG0680031431.01.T01:CDS | 55.0% |
| !! | AGAGTACCGGTGACCAATGG+TGG | - | Chr6:20360274-20360293 | MsG0680031431.01.T01:CDS | 55.0% |
| !! | CAGCCGGTTTCTGGTTCAAC+CGG | + | Chr6:20361200-20361219 | None:intergenic | 55.0% |
| CAGGCGTCTGGAAGTGGTGT+GGG | - | Chr6:20360407-20360426 | MsG0680031431.01.T01:CDS | 60.0% | |
| CCGAATCAGGCGTCTGGAAG+TGG | - | Chr6:20360401-20360420 | MsG0680031431.01.T01:CDS | 60.0% | |
| CCGGTACTCTCCCAACGAAG+AGG | + | Chr6:20360264-20360283 | None:intergenic | 60.0% | |
| GATTAGGCGTGTCCCCGTGT+CGG | + | Chr6:20361361-20361380 | None:intergenic | 60.0% | |
| TCAGGCGTCTGGAAGTGGTG+TGG | - | Chr6:20360406-20360425 | MsG0680031431.01.T01:CDS | 60.0% | |
| TGTCGGTACGTGTCCGACAC+GGG | - | Chr6:20361345-20361364 | MsG0680031431.01.T01:CDS | 60.0% | |
| ! | GTGTCGGTACGTGTCCGACA+CGG | - | Chr6:20361344-20361363 | MsG0680031431.01.T01:CDS | 60.0% |
| !! | CAGACGCCTGATTCGGCGTA+GGG | + | Chr6:20360397-20360416 | None:intergenic | 60.0% |
| !! | GGGAGAGTACCGGTGACCAA+TGG | - | Chr6:20360271-20360290 | MsG0680031431.01.T01:CDS | 60.0% |
| ACGGGGACACGCCTAATCCG+AGG | - | Chr6:20361363-20361382 | MsG0680031431.01.T01:CDS | 65.0% | |
| CCTACGCCGAATCAGGCGTC+TGG | - | Chr6:20360395-20360414 | MsG0680031431.01.T01:CDS | 65.0% | |
| GTCGGTACGTGTCCGACACG+GGG | - | Chr6:20361346-20361365 | MsG0680031431.01.T01:CDS | 65.0% | |
| !! | CCAGACGCCTGATTCGGCGT+AGG | + | Chr6:20360398-20360417 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 20360243 | 20362780 | 20360243 | ID=MsG0680031431.01;Name=MsG0680031431.01 |
| Chr6 | mRNA | 20360243 | 20362780 | 20360243 | ID=MsG0680031431.01.T01;Parent=MsG0680031431.01;Name=MsG0680031431.01.T01;_AED=0.22;_eAED=0.24;_QI=0|0|0|1|0|0|2|0|694 |
| Chr6 | exon | 20362053 | 20362780 | 20362053 | ID=MsG0680031431.01.T01:exon:12960;Parent=MsG0680031431.01.T01 |
| Chr6 | exon | 20360243 | 20361599 | 20360243 | ID=MsG0680031431.01.T01:exon:12959;Parent=MsG0680031431.01.T01 |
| Chr6 | CDS | 20362053 | 20362780 | 20362053 | ID=MsG0680031431.01.T01:cds;Parent=MsG0680031431.01.T01 |
| Chr6 | CDS | 20360243 | 20361599 | 20360243 | ID=MsG0680031431.01.T01:cds;Parent=MsG0680031431.01.T01 |
| Gene Sequence |
| Protein sequence |
