Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040374.01.T01 | XP_003625087.2 | 80.845 | 355 | 27 | 4 | 1 | 355 | 1 | 314 | 1.69E-168 | 482 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040374.01.T01 | G7KSK5 | 80.845 | 355 | 27 | 4 | 1 | 355 | 1 | 314 | 8.09e-169 | 482 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047791.01 | MsG0780040374.01 | 0.803177 | 3.947544e-49 | 1.970507e-46 |
MsG0080048073.01 | MsG0780040374.01 | 0.801726 | 7.858446e-49 | 3.780204e-46 |
MsG0080048748.01 | MsG0780040374.01 | 0.800734 | 1.254370e-48 | 5.884590e-46 |
MsG0080048938.01 | MsG0780040374.01 | 0.812810 | 3.514808e-51 | 2.256591e-48 |
MsG0080049069.01 | MsG0780040374.01 | 0.803712 | 3.057866e-49 | 1.547455e-46 |
MsG0180000114.01 | MsG0780040374.01 | 0.822497 | 2.295253e-53 | 1.924368e-50 |
MsG0180000482.01 | MsG0780040374.01 | 0.829445 | 5.128530e-55 | 5.249797e-52 |
MsG0180000814.01 | MsG0780040374.01 | 0.835473 | 1.644009e-56 | 2.012410e-53 |
MsG0180001100.01 | MsG0780040374.01 | 0.800384 | 1.478094e-48 | 6.873156e-46 |
MsG0180001594.01 | MsG0780040374.01 | 0.826638 | 2.430788e-54 | 2.292656e-51 |
MsG0180003189.01 | MsG0780040374.01 | 0.810908 | 9.122278e-51 | 5.568493e-48 |
MsG0180003725.01 | MsG0780040374.01 | 0.815923 | 7.208823e-52 | 5.036355e-49 |
MsG0180004396.01 | MsG0780040374.01 | 0.804219 | 2.399788e-49 | 1.230338e-46 |
MsG0180004541.01 | MsG0780040374.01 | 0.808590 | 2.873768e-50 | 1.649638e-47 |
MsG0180004996.01 | MsG0780040374.01 | 0.801881 | 7.303521e-49 | 3.527403e-46 |
MsG0180005397.01 | MsG0780040374.01 | 0.815085 | 1.107332e-51 | 7.560875e-49 |
MsG0180005408.01 | MsG0780040374.01 | 0.802159 | 6.402592e-49 | 3.114122e-46 |
MsG0180006251.01 | MsG0780040374.01 | 0.800035 | 1.740912e-48 | 8.023493e-46 |
MsG0780040374.01 | MsG0780040888.01 | 0.812598 | 3.911781e-51 | 2.497639e-48 |
MsG0780040374.01 | MsG0780041491.01 | 0.806008 | 1.013131e-49 | 5.439291e-47 |
MsG0780040374.01 | MsG0780041747.01 | 0.814040 | 1.886236e-51 | 1.252093e-48 |
MsG0780040374.01 | MsG0880041852.01 | 0.806117 | 9.610110e-50 | 5.173711e-47 |
MsG0780040374.01 | MsG0880042134.01 | 0.802731 | 4.880447e-49 | 2.408713e-46 |
MsG0780040374.01 | MsG0880042622.01 | 0.802252 | 6.128126e-49 | 2.987707e-46 |
MsG0780040374.01 | MsG0880042857.01 | 0.839041 | 2.008029e-57 | 2.739359e-54 |
MsG0780040374.01 | MsG0880042987.01 | -0.814714 | 1.338658e-51 | 9.049370e-49 |
MsG0780040374.01 | MsG0880043829.01 | 0.804390 | 2.210268e-49 | 1.138210e-46 |
MsG0780040374.01 | MsG0880045285.01 | 0.843497 | 1.350960e-58 | 2.117579e-55 |
MsG0780040374.01 | MsG0880045783.01 | 0.815663 | 8.235918e-52 | 5.713485e-49 |
MsG0780040374.01 | MsG0880045992.01 | 0.839551 | 1.480802e-57 | 2.051852e-54 |
MsG0780040374.01 | MsG0880047045.01 | 0.870437 | 1.460565e-66 | 5.680975e-63 |
MsG0780040374.01 | MsG0880047046.01 | 0.863716 | 2.041549e-64 | 6.250682e-61 |
MsG0780040374.01 | MsG0880047052.01 | 0.819390 | 1.191114e-52 | 9.153105e-50 |
MsG0780040374.01 | MsG0880047152.01 | 0.809615 | 1.733222e-50 | 1.022524e-47 |
MsG0380011537.01 | MsG0780040374.01 | 0.833172 | 6.211187e-56 | 7.096520e-53 |
MsG0380011669.01 | MsG0780040374.01 | 0.816896 | 4.366708e-52 | 3.133125e-49 |
MsG0380011895.01 | MsG0780040374.01 | 0.836356 | 9.816729e-57 | 1.234171e-53 |
MsG0380013342.01 | MsG0780040374.01 | 0.837567 | 4.815459e-57 | 6.280227e-54 |
MsG0680031334.01 | MsG0780040374.01 | 0.821377 | 4.170635e-53 | 3.387215e-50 |
MsG0680031377.01 | MsG0780040374.01 | -0.806423 | 8.287058e-50 | 4.496139e-47 |
MsG0680031468.01 | MsG0780040374.01 | 0.845597 | 3.678497e-59 | 6.161241e-56 |
MsG0680031815.01 | MsG0780040374.01 | 0.822770 | 1.983475e-53 | 1.675998e-50 |
MsG0680032058.01 | MsG0780040374.01 | 0.807808 | 4.217866e-50 | 2.371997e-47 |
MsG0680032827.01 | MsG0780040374.01 | 0.815939 | 7.148431e-52 | 4.996458e-49 |
MsG0680033459.01 | MsG0780040374.01 | 0.823169 | 1.600568e-53 | 1.367717e-50 |
MsG0480018847.01 | MsG0780040374.01 | 0.812851 | 3.443818e-51 | 2.213432e-48 |
MsG0480018848.01 | MsG0780040374.01 | 0.815374 | 9.550993e-52 | 6.573407e-49 |
MsG0480018883.01 | MsG0780040374.01 | 0.806144 | 9.488803e-50 | 5.111820e-47 |
MsG0480018995.01 | MsG0780040374.01 | 0.816116 | 6.528047e-52 | 4.585171e-49 |
MsG0480020322.01 | MsG0780040374.01 | 0.810524 | 1.104583e-50 | 6.673246e-48 |
MsG0480021280.01 | MsG0780040374.01 | 0.828261 | 9.916473e-55 | 9.805463e-52 |
MsG0480021468.01 | MsG0780040374.01 | 0.815853 | 7.473772e-52 | 5.211401e-49 |
MsG0480021690.01 | MsG0780040374.01 | 0.811513 | 6.741616e-51 | 4.181583e-48 |
MsG0480022178.01 | MsG0780040374.01 | 0.815513 | 8.893798e-52 | 6.144786e-49 |
MsG0480022933.01 | MsG0780040374.01 | 0.809051 | 2.290225e-50 | 1.330825e-47 |
MsG0480023660.01 | MsG0780040374.01 | 0.812268 | 4.618168e-51 | 2.923004e-48 |
MsG0480023877.01 | MsG0780040374.01 | 0.812083 | 5.068246e-51 | 3.191709e-48 |
MsG0480023994.01 | MsG0780040374.01 | 0.810656 | 1.034316e-50 | 6.271104e-48 |
MsG0580024160.01 | MsG0780040374.01 | 0.811610 | 6.422230e-51 | 3.993342e-48 |
MsG0580024775.01 | MsG0780040374.01 | 0.828524 | 8.571887e-55 | 8.541538e-52 |
MsG0580025906.01 | MsG0780040374.01 | 0.806449 | 8.181315e-50 | 4.441916e-47 |
MsG0380015847.01 | MsG0780040374.01 | -0.816238 | 6.131095e-52 | 4.320703e-49 |
MsG0380015849.01 | MsG0780040374.01 | -0.830174 | 3.407770e-55 | 3.563067e-52 |
MsG0380015891.01 | MsG0780040374.01 | 0.820012 | 8.585436e-53 | 6.713900e-50 |
MsG0380016182.01 | MsG0780040374.01 | 0.807387 | 5.181608e-50 | 2.882304e-47 |
MsG0380017338.01 | MsG0780040374.01 | 0.804522 | 2.074816e-49 | 1.072040e-46 |
MsG0480018236.01 | MsG0780040374.01 | 0.830698 | 2.536139e-55 | 2.692643e-52 |
MsG0580026304.01 | MsG0780040374.01 | 0.851040 | 1.149591e-60 | 2.296811e-57 |
MsG0580028033.01 | MsG0780040374.01 | 0.825844 | 3.756584e-54 | 3.464134e-51 |
MsG0580029514.01 | MsG0780040374.01 | -0.820100 | 8.196529e-53 | 6.425856e-50 |
MsG0580029925.01 | MsG0780040374.01 | 0.808594 | 2.868246e-50 | 1.646660e-47 |
MsG0280007023.01 | MsG0780040374.01 | 0.821349 | 4.232112e-53 | 3.434600e-50 |
MsG0280007062.01 | MsG0780040374.01 | 0.812681 | 3.751301e-51 | 2.400477e-48 |
MsG0280008098.01 | MsG0780040374.01 | 0.807962 | 3.911571e-50 | 2.208656e-47 |
MsG0280008660.01 | MsG0780040374.01 | -0.800838 | 1.194231e-48 | 5.617507e-46 |
MsG0280008929.01 | MsG0780040374.01 | 0.809738 | 1.631537e-50 | 9.656130e-48 |
MsG0280010288.01 | MsG0780040374.01 | 0.814415 | 1.558576e-51 | 1.045201e-48 |
MsG0680035707.01 | MsG0780040374.01 | 0.803919 | 2.770254e-49 | 1.409519e-46 |
MsG0780035957.01 | MsG0780040374.01 | 0.810068 | 1.385418e-50 | 8.270458e-48 |
MsG0780036978.01 | MsG0780040374.01 | 0.825295 | 5.068346e-54 | 4.600993e-51 |
MsG0780037330.01 | MsG0780040374.01 | 0.810996 | 8.728329e-51 | 5.340978e-48 |
MsG0780039143.01 | MsG0780040374.01 | 0.809650 | 1.704254e-50 | 1.006310e-47 |
MsG0780039435.01 | MsG0780040374.01 | 0.804245 | 2.369554e-49 | 1.215636e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040374.01.T01 | MTR_7g090780 | 80.845 | 355 | 27 | 4 | 1 | 355 | 1 | 314 | 2.05e-172 | 482 |
MsG0780040374.01.T01 | MTR_7g090780 | 92.969 | 256 | 13 | 2 | 100 | 355 | 1 | 251 | 3.51e-143 | 405 |
MsG0780040374.01.T01 | MTR_7g090830 | 71.080 | 287 | 71 | 3 | 69 | 355 | 15 | 289 | 3.82e-131 | 377 |
MsG0780040374.01.T01 | MTR_7g090800 | 66.899 | 287 | 81 | 3 | 70 | 355 | 34 | 307 | 5.47e-128 | 369 |
MsG0780040374.01.T01 | MTR_7g090860 | 76.400 | 250 | 57 | 1 | 68 | 317 | 33 | 280 | 3.29e-124 | 367 |
MsG0780040374.01.T01 | MTR_7g090775 | 70.930 | 258 | 70 | 2 | 61 | 317 | 5 | 258 | 4.64e-121 | 350 |
MsG0780040374.01.T01 | MTR_7g090820 | 69.014 | 284 | 59 | 4 | 69 | 352 | 29 | 283 | 7.73e-115 | 337 |
MsG0780040374.01.T01 | MTR_1g051750 | 42.986 | 221 | 105 | 6 | 70 | 279 | 21 | 231 | 4.77e-51 | 170 |
MsG0780040374.01.T01 | MTR_3g023510 | 43.119 | 109 | 62 | 0 | 70 | 178 | 34 | 142 | 1.60e-28 | 114 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040374.01.T01 | AT5G03990 | 33.977 | 259 | 141 | 6 | 73 | 330 | 40 | 269 | 4.10e-33 | 125 |
MsG0780040374.01.T01 | AT3G51940 | 51.087 | 92 | 44 | 1 | 74 | 164 | 33 | 124 | 3.60e-28 | 114 |
MsG0780040374.01.T01 | AT3G51940 | 51.087 | 92 | 44 | 1 | 74 | 164 | 37 | 128 | 4.25e-28 | 114 |
MsG0780040374.01.T01 | AT5G03990 | 31.034 | 232 | 130 | 6 | 100 | 330 | 1 | 203 | 9.44e-20 | 87.4 |
Find 106 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGAATCAATTGGTAATTTA+AGG | 0.112372 | 7:-76703365 | None:intergenic |
CCAAAGGTGGCTTTCTTTAT+AGG | 0.144673 | 7:-76702038 | None:intergenic |
TGCATCCCAATGTGGTAAAT+TGG | 0.166892 | 7:+76703511 | MsG0780040374.01.T01:CDS |
GAAATGGCGGTAATGGAAAT+TGG | 0.216567 | 7:+76704042 | MsG0780040374.01.T01:CDS |
TTGATTCTATTTATTCCTTT+TGG | 0.228657 | 7:+76703379 | MsG0780040374.01.T01:CDS |
TTATTACTGAAATGGATAAT+TGG | 0.261329 | 7:+76701957 | None:intergenic |
TGTCGACCCCGAACTTTATC+TGG | 0.292705 | 7:+76703665 | MsG0780040374.01.T01:CDS |
GGCGAGGCAGCCGTGATTCT+TGG | 0.305461 | 7:+76703732 | MsG0780040374.01.T01:CDS |
GGAGGAGGAGGAAGAGGTGG+AGG | 0.309961 | 7:+76704191 | MsG0780040374.01.T01:CDS |
GGAGGAGGAAGAGGTGGAGG+AGG | 0.311785 | 7:+76704194 | MsG0780040374.01.T01:CDS |
GTTGAACCTTCAAAGGAATA+TGG | 0.318838 | 7:+76703936 | MsG0780040374.01.T01:CDS |
GGTGGAGGAGGAGGAAGGAG+GGG | 0.319614 | 7:+76704206 | MsG0780040374.01.T01:CDS |
AGGTGGAGGAGGAGGAAGGA+GGG | 0.326176 | 7:+76704205 | MsG0780040374.01.T01:CDS |
CGCCGCAACATGGAAGAAAA+AGG | 0.329418 | 7:+76703711 | MsG0780040374.01.T01:CDS |
GGAGGAAGAGGTGGAGGAGG+AGG | 0.330303 | 7:+76704197 | MsG0780040374.01.T01:CDS |
CGCCAACCATATTCCTTTGA+AGG | 0.340454 | 7:-76703942 | None:intergenic |
GGATGGGGACCTACTGGATG+GGG | 0.344597 | 7:+76703792 | MsG0780040374.01.T01:CDS |
GGAGGAAGAGGAGGAGGAGG+AGG | 0.345038 | 7:+76704179 | MsG0780040374.01.T01:CDS |
TCCATCCATGATAATCATTC+TGG | 0.346408 | 7:-76703971 | None:intergenic |
GAGGTGGAGGAGGAGGAAGG+AGG | 0.349043 | 7:+76704204 | MsG0780040374.01.T01:CDS |
CCTATAAAGAAAGCCACCTT+TGG | 0.353054 | 7:+76702038 | MsG0780040374.01.T01:CDS |
AAATGGCGGTAATGGAAATT+GGG | 0.360900 | 7:+76704043 | MsG0780040374.01.T01:CDS |
AGAAGAAGAAGCGGAGGAAG+AGG | 0.362675 | 7:+76704167 | MsG0780040374.01.T01:CDS |
AGCGGAGGAAGAGGAGGAGG+AGG | 0.362993 | 7:+76704176 | MsG0780040374.01.T01:CDS |
TTCCTTCTAGGTGTGATTAT+AGG | 0.366071 | 7:+76703337 | MsG0780040374.01.T01:intron |
AGAATCAATTGGTAATTTAA+GGG | 0.366209 | 7:-76703364 | None:intergenic |
GATGGGGACCTACTGGATGG+GGG | 0.369719 | 7:+76703793 | MsG0780040374.01.T01:CDS |
TCCTTTGAAGGTTCAACAAC+AGG | 0.379188 | 7:-76703930 | None:intergenic |
TTCCACATCCAGATAAAGTT+CGG | 0.380635 | 7:-76703673 | None:intergenic |
TCCACATCCAGATAAAGTTC+GGG | 0.382465 | 7:-76703672 | None:intergenic |
AAGGAATATGGTTGGCGAAA+TGG | 0.391675 | 7:+76703948 | MsG0780040374.01.T01:CDS |
CTGGATGGGGACCTACTGGA+TGG | 0.396986 | 7:+76703790 | MsG0780040374.01.T01:CDS |
GAAGAGGTGGAGGAGGAGGA+AGG | 0.407371 | 7:+76704201 | MsG0780040374.01.T01:CDS |
CAAGGAAGAAATGGCGGTAA+TGG | 0.409545 | 7:+76704035 | MsG0780040374.01.T01:CDS |
TGGATGGGGACCTACTGGAT+GGG | 0.411862 | 7:+76703791 | MsG0780040374.01.T01:CDS |
TGAACAGAATTATGCTGCTC+AGG | 0.411888 | 7:+76703848 | MsG0780040374.01.T01:CDS |
AGAAGCGGAGGAAGAGGAGG+AGG | 0.414895 | 7:+76704173 | MsG0780040374.01.T01:CDS |
AACAAGTATCAAGGAAGAAA+TGG | 0.421942 | 7:+76704026 | MsG0780040374.01.T01:CDS |
TCATCCCAATTTACCACATT+GGG | 0.428459 | 7:-76703516 | None:intergenic |
AAAATAATGAAACAAACTCT+TGG | 0.438543 | 7:+76703892 | MsG0780040374.01.T01:CDS |
TGGAATCAGACGGAGCAATA+TGG | 0.440258 | 7:+76703990 | MsG0780040374.01.T01:CDS |
GGTTTCCAACAGTGCCTTTG+TGG | 0.441064 | 7:+76703415 | MsG0780040374.01.T01:CDS |
TCCCCATCCAGGACCGGAAA+AGG | 0.450165 | 7:-76703778 | None:intergenic |
ATGGGGACCTACTGGATGGG+GGG | 0.451326 | 7:+76703794 | MsG0780040374.01.T01:CDS |
CCATGGCGAAAGGTAATAGA+AGG | 0.451419 | 7:+76703471 | MsG0780040374.01.T01:CDS |
GGTCCTGGATGGGGACCTAC+TGG | 0.453239 | 7:+76703786 | MsG0780040374.01.T01:CDS |
CTCACATTGATGATGTAGAT+TGG | 0.455451 | 7:+76703634 | MsG0780040374.01.T01:CDS |
TCATCATCAAGTGGGGTCAC+TGG | 0.458116 | 7:+76702002 | MsG0780040374.01.T01:CDS |
ATTAGTGCCATGATGATGTC+CGG | 0.466379 | 7:-76704123 | None:intergenic |
GATGATGATTACTGATCCCT+TGG | 0.467657 | 7:-76701987 | None:intergenic |
AAGGAATAAATAGAATCAAT+TGG | 0.469962 | 7:-76703375 | None:intergenic |
TCAATGTGAGTGTCGAGATC+AGG | 0.474988 | 7:-76703621 | None:intergenic |
CTATAAAGAAAGCCACCTTT+GGG | 0.475443 | 7:+76702039 | MsG0780040374.01.T01:CDS |
AAATAATGAAACAAACTCTT+GGG | 0.477297 | 7:+76703893 | MsG0780040374.01.T01:CDS |
TCAACAACAGGAGCACGATA+TGG | 0.478493 | 7:-76703918 | None:intergenic |
AGAAGAAGCGGAGGAAGAGG+AGG | 0.489710 | 7:+76704170 | MsG0780040374.01.T01:CDS |
AATGAATATCAGATGAATAG+AGG | 0.493050 | 7:+76704143 | MsG0780040374.01.T01:CDS |
AGAATTATGCTGCTCAGGGA+TGG | 0.497386 | 7:+76703853 | MsG0780040374.01.T01:CDS |
GCATCCCAATGTGGTAAATT+GGG | 0.497460 | 7:+76703512 | MsG0780040374.01.T01:CDS |
TCCTGTTGTTGAACCTTCAA+AGG | 0.497931 | 7:+76703929 | MsG0780040374.01.T01:CDS |
CCTATTATCTGCGAACCAAA+AGG | 0.500347 | 7:-76703394 | None:intergenic |
GTAATGGAAATTGGGGAGCA+TGG | 0.502202 | 7:+76704051 | MsG0780040374.01.T01:CDS |
GTTTCCAACAGTGCCTTTGT+GGG | 0.503784 | 7:+76703416 | MsG0780040374.01.T01:CDS |
GGAAATTGGGGAGCATGGGA+TGG | 0.507278 | 7:+76704056 | MsG0780040374.01.T01:CDS |
ATCAGGCAATGGTATGTCGC+AGG | 0.507842 | 7:-76703604 | None:intergenic |
TTAGTGCCATGATGATGTCC+GGG | 0.507899 | 7:-76704122 | None:intergenic |
CATCCAGTAGGTCCCCATCC+AGG | 0.508679 | 7:-76703789 | None:intergenic |
AGAGGAAGAAGAAGAAGCGG+AGG | 0.514759 | 7:+76704161 | MsG0780040374.01.T01:CDS |
AATCGATTGGCTCAGTTCCA+TGG | 0.520978 | 7:+76703454 | MsG0780040374.01.T01:CDS |
AGCAGAGGCCCGCCGCAACA+TGG | 0.520992 | 7:+76703701 | MsG0780040374.01.T01:CDS |
GTCATCCCAATTTACCACAT+TGG | 0.528139 | 7:-76703517 | None:intergenic |
TAATGGAAATTGGGGAGCAT+GGG | 0.534866 | 7:+76704052 | MsG0780040374.01.T01:CDS |
CCCCGAACTTTATCTGGATG+TGG | 0.535767 | 7:+76703671 | MsG0780040374.01.T01:CDS |
GTGGAAAAGGTAGCTACTCC+TGG | 0.538528 | 7:+76704242 | MsG0780040374.01.T01:CDS |
CCTTCTATTACCTTTCGCCA+TGG | 0.539041 | 7:-76703471 | None:intergenic |
ATCTTCATTTACCATGCACC+AGG | 0.539123 | 7:-76704260 | None:intergenic |
TAAGCCTCTTCTCACAAAAG+AGG | 0.541728 | 7:-76702426 | None:intergenic |
GAATTATGCTGCTCAGGGAT+GGG | 0.543052 | 7:+76703854 | MsG0780040374.01.T01:CDS |
GCCAGAATGATTATCATGGA+TGG | 0.543243 | 7:+76703970 | MsG0780040374.01.T01:CDS |
GACTTGCATAACAAGTATCA+AGG | 0.550052 | 7:+76704017 | MsG0780040374.01.T01:CDS |
AATAGAGGAAGAAGAAGAAG+CGG | 0.550756 | 7:+76704158 | MsG0780040374.01.T01:CDS |
ATCAGTAATCATCATCAAGT+GGG | 0.555152 | 7:+76701994 | MsG0780040374.01.T01:CDS |
AACCTTCAAAGGAATATGGT+TGG | 0.557337 | 7:+76703940 | MsG0780040374.01.T01:CDS |
AATGGCCAGAATGATTATCA+TGG | 0.560785 | 7:+76703966 | MsG0780040374.01.T01:CDS |
AGTAGGTCCCCATCCAGGAC+CGG | 0.560984 | 7:-76703784 | None:intergenic |
AATAACCCCGGACATCATCA+TGG | 0.580939 | 7:+76704116 | MsG0780040374.01.T01:CDS |
GAACAGAATTATGCTGCTCA+GGG | 0.595487 | 7:+76703849 | MsG0780040374.01.T01:CDS |
GATCAGTAATCATCATCAAG+TGG | 0.615022 | 7:+76701993 | MsG0780040374.01.T01:CDS |
AGGTAGCTACTCCTGGTGCA+TGG | 0.624734 | 7:+76704249 | MsG0780040374.01.T01:CDS |
GGATGTGGAAAGAGAAGCAG+AGG | 0.624882 | 7:+76703686 | MsG0780040374.01.T01:CDS |
GCTTTCTTTATAGGACGATG+AGG | 0.626542 | 7:-76702029 | None:intergenic |
TCAGGCAATGGTATGTCGCA+GGG | 0.628570 | 7:-76703603 | None:intergenic |
TGGCTCAGTTCCATGGCGAA+AGG | 0.630820 | 7:+76703461 | MsG0780040374.01.T01:CDS |
GGATGACTCTGCTGTCAAAG+AGG | 0.633767 | 7:+76703533 | MsG0780040374.01.T01:CDS |
AAGAGAACTACCAAGAATCA+CGG | 0.642265 | 7:-76703742 | None:intergenic |
AATGGCGGTAATGGAAATTG+GGG | 0.644690 | 7:+76704044 | MsG0780040374.01.T01:CDS |
AGAGAGAAAACAATATGTCG+TGG | 0.652185 | 7:+76704090 | MsG0780040374.01.T01:CDS |
AAGTATCAAGGAAGAAATGG+CGG | 0.663489 | 7:+76704029 | MsG0780040374.01.T01:CDS |
ATGTCGTGGTCTAATAACCC+CGG | 0.670337 | 7:+76704104 | MsG0780040374.01.T01:CDS |
CCACATCCAGATAAAGTTCG+GGG | 0.678042 | 7:-76703671 | None:intergenic |
GAATGGTACTAACCCAAAGG+TGG | 0.681196 | 7:-76702051 | None:intergenic |
TTATCATGGATGGAATCAGA+CGG | 0.682338 | 7:+76703980 | MsG0780040374.01.T01:CDS |
TGAGTGTCGAGATCAGGCAA+TGG | 0.693994 | 7:-76703615 | None:intergenic |
TAGTGCCATGATGATGTCCG+GGG | 0.697507 | 7:-76704121 | None:intergenic |
TCAGTAATCATCATCAAGTG+GGG | 0.699017 | 7:+76701995 | MsG0780040374.01.T01:CDS |
TATGTATCTGCATCCCAATG+TGG | 0.712444 | 7:+76703503 | MsG0780040374.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAACACTTATTTATTGAA+TGG | - | Chr7:76703274-76703293 | None:intergenic | 15.0% |
!! | ATTTAATTATAGAAATGTAC+AGG | + | Chr7:76702697-76702716 | MsG0780040374.01.T01:intron | 15.0% |
!! | TAACAAATAAAACTAAAGAA+AGG | - | Chr7:76702104-76702123 | None:intergenic | 15.0% |
!! | TTTAATTATAGAAATGTACA+GGG | + | Chr7:76702698-76702717 | MsG0780040374.01.T01:intron | 15.0% |
!!! | TATCTACTAATTAAATCTTT+TGG | + | Chr7:76703151-76703170 | MsG0780040374.01.T01:intron | 15.0% |
!! | AAAATAATGAAACAAACTCT+TGG | + | Chr7:76703892-76703911 | MsG0780040374.01.T01:CDS | 20.0% |
!! | AAATAATGAAACAAACTCTT+GGG | + | Chr7:76703893-76703912 | MsG0780040374.01.T01:CDS | 20.0% |
!! | AAATTTAACCAAACTTGAAA+TGG | - | Chr7:76702962-76702981 | None:intergenic | 20.0% |
!! | AAGGAATAAATAGAATCAAT+TGG | - | Chr7:76703378-76703397 | None:intergenic | 20.0% |
!! | AATTGAACATATTCAAAAGT+AGG | - | Chr7:76702262-76702281 | None:intergenic | 20.0% |
!! | ATTGAACATATTCAAAAGTA+GGG | - | Chr7:76702261-76702280 | None:intergenic | 20.0% |
!! | CAAGATATTCAATAATTGAA+GGG | + | Chr7:76702562-76702581 | MsG0780040374.01.T01:intron | 20.0% |
!! | TGAAATGTTGTAAAATATGA+TGG | + | Chr7:76702502-76702521 | MsG0780040374.01.T01:intron | 20.0% |
!! | TTCTATAATTAAATGACGTA+GGG | - | Chr7:76702691-76702710 | None:intergenic | 20.0% |
!! | TTTCTATAATTAAATGACGT+AGG | - | Chr7:76702692-76702711 | None:intergenic | 20.0% |
!!! | AAATTTTTCTTATGTGGAAA+AGG | + | Chr7:76704229-76704248 | MsG0780040374.01.T01:CDS | 20.0% |
!!! | ACTTTTGAATATGTTCAATT+GGG | + | Chr7:76702262-76702281 | MsG0780040374.01.T01:intron | 20.0% |
!!! | AGAATCAATTGGTAATTTAA+GGG | - | Chr7:76703367-76703386 | None:intergenic | 20.0% |
!!! | GATCAGTGATTTAAAATAAT+TGG | + | Chr7:76702163-76702182 | MsG0780040374.01.T01:intron | 20.0% |
!!! | TACTTTTGAATATGTTCAAT+TGG | + | Chr7:76702261-76702280 | MsG0780040374.01.T01:intron | 20.0% |
!!! | TAGAATCAATTGGTAATTTA+AGG | - | Chr7:76703368-76703387 | None:intergenic | 20.0% |
!!! | TTGATTCTATTTATTCCTTT+TGG | + | Chr7:76703379-76703398 | MsG0780040374.01.T01:CDS | 20.0% |
!!! | TTGTTTCATTATTTTCATGT+TGG | - | Chr7:76703887-76703906 | None:intergenic | 20.0% |
! | AATGAATATCAGATGAATAG+AGG | + | Chr7:76704143-76704162 | MsG0780040374.01.T01:CDS | 25.0% |
! | AATGTTGTAAAATATGATGG+AGG | + | Chr7:76702505-76702524 | MsG0780040374.01.T01:intron | 25.0% |
! | ACAAAAGATAGACTAAAGAA+AGG | - | Chr7:76702931-76702950 | None:intergenic | 25.0% |
! | ACAGGAAATTTAAGTATCTT+TGG | - | Chr7:76703089-76703108 | None:intergenic | 25.0% |
! | AGGTCATTCAATTATTGAAT+AGG | + | Chr7:76703202-76703221 | MsG0780040374.01.T01:intron | 25.0% |
! | CCAAGATATTCAATAATTGA+AGG | + | Chr7:76702561-76702580 | MsG0780040374.01.T01:intron | 25.0% |
! | CCTTCAATTATTGAATATCT+TGG | - | Chr7:76702564-76702583 | None:intergenic | 25.0% |
! | TTCAATAATTGAATGACCTA+AGG | - | Chr7:76703201-76703220 | None:intergenic | 25.0% |
!! | AAGAGTGTAGTTAAATAAAC+AGG | - | Chr7:76703107-76703126 | None:intergenic | 25.0% |
!! | ATGAATTGTTGTCATTTCTT+TGG | + | Chr7:76702600-76702619 | MsG0780040374.01.T01:intron | 25.0% |
!! | ATGTTGTAAAATATGATGGA+GGG | + | Chr7:76702506-76702525 | MsG0780040374.01.T01:intron | 25.0% |
!! | ATTTTTCTTAGGATGAGTTT+TGG | + | Chr7:76702376-76702395 | MsG0780040374.01.T01:intron | 25.0% |
!! | CTACTAATTAAATCTTTTGG+AGG | + | Chr7:76703154-76703173 | MsG0780040374.01.T01:intron | 25.0% |
!! | CTTTTGAATATGTTCAATTG+GGG | + | Chr7:76702263-76702282 | MsG0780040374.01.T01:intron | 25.0% |
!!! | AAATGAAACCATTTCAAGTT+TGG | + | Chr7:76702951-76702970 | MsG0780040374.01.T01:intron | 25.0% |
!!! | GGTTAAATTTGTTCTGAAAA+TGG | + | Chr7:76702972-76702991 | MsG0780040374.01.T01:intron | 25.0% |
!!! | TGGTTTTGAATGAACAATTT+TGG | + | Chr7:76702305-76702324 | MsG0780040374.01.T01:intron | 25.0% |
!!! | TTACTTTTCAAAGTATCCTT+AGG | + | Chr7:76703182-76703201 | MsG0780040374.01.T01:intron | 25.0% |
AACAAGTATCAAGGAAGAAA+TGG | + | Chr7:76704026-76704045 | MsG0780040374.01.T01:CDS | 30.0% | |
AGGTTGTAATTTCTTCTTGT+TGG | + | Chr7:76702636-76702655 | MsG0780040374.01.T01:intron | 30.0% | |
ATCAGTAATCATCATCAAGT+GGG | + | Chr7:76701994-76702013 | MsG0780040374.01.T01:CDS | 30.0% | |
ATTAAATTGACGAAGCTTAC+AGG | + | Chr7:76702894-76702913 | MsG0780040374.01.T01:intron | 30.0% | |
CATTTGACAATGCAAAAAAC+AGG | + | Chr7:76703556-76703575 | MsG0780040374.01.T01:CDS | 30.0% | |
GATAATTGGAGAAAAACCAA+GGG | + | Chr7:76701971-76701990 | MsG0780040374.01.T01:CDS | 30.0% | |
GTCAATTTAATGATGAGGTA+GGG | - | Chr7:76702885-76702904 | None:intergenic | 30.0% | |
TCAATGATGACACACATTAT+CGG | - | Chr7:76703050-76703069 | None:intergenic | 30.0% | |
TTCGTGTATTGAAAATGTCT+AGG | + | Chr7:76703128-76703147 | MsG0780040374.01.T01:intron | 30.0% | |
! | AACTATGTTTCTGTTTGTGT+TGG | + | Chr7:76702730-76702749 | MsG0780040374.01.T01:intron | 30.0% |
! | ACAATGCAAAAAACAGGTTT+TGG | + | Chr7:76703562-76703581 | MsG0780040374.01.T01:CDS | 30.0% |
! | CAATGCAAAAAACAGGTTTT+GGG | + | Chr7:76703563-76703582 | MsG0780040374.01.T01:CDS | 30.0% |
! | CTAGACAGATTTAGTTCAAA+AGG | - | Chr7:76703245-76703264 | None:intergenic | 30.0% |
! | TAAAATATGATGGAGGGTTT+AGG | + | Chr7:76702512-76702531 | MsG0780040374.01.T01:intron | 30.0% |
!! | AAGAAGTTTTGTGAATCGAT+TGG | + | Chr7:76703441-76703460 | MsG0780040374.01.T01:CDS | 30.0% |
!! | ATGTTCAAGTTGGTATCTAT+TGG | + | Chr7:76703009-76703028 | MsG0780040374.01.T01:intron | 30.0% |
!! | TCTGAAAATGGTCTTGATTT+TGG | + | Chr7:76702984-76703003 | MsG0780040374.01.T01:intron | 30.0% |
AACCTATAATCACACCTAGA+AGG | - | Chr7:76703342-76703361 | None:intergenic | 35.0% | |
AACCTTCAAAGGAATATGGT+TGG | + | Chr7:76703940-76703959 | MsG0780040374.01.T01:CDS | 35.0% | |
AAGAGAACTACCAAGAATCA+CGG | - | Chr7:76703745-76703764 | None:intergenic | 35.0% | |
AAGTATCAAGGAAGAAATGG+CGG | + | Chr7:76704029-76704048 | MsG0780040374.01.T01:CDS | 35.0% | |
AATAGAGGAAGAAGAAGAAG+CGG | + | Chr7:76704158-76704177 | MsG0780040374.01.T01:CDS | 35.0% | |
AATATGTTCAATTGGGGTGT+TGG | + | Chr7:76702269-76702288 | MsG0780040374.01.T01:intron | 35.0% | |
AATGATGACACACATTATCG+GGG | - | Chr7:76703048-76703067 | None:intergenic | 35.0% | |
AATGGCCAGAATGATTATCA+TGG | + | Chr7:76703966-76703985 | MsG0780040374.01.T01:CDS | 35.0% | |
AATTGAAGGGAGTTTCACTA+AGG | + | Chr7:76702575-76702594 | MsG0780040374.01.T01:intron | 35.0% | |
AGAGAGAAAACAATATGTCG+TGG | + | Chr7:76704090-76704109 | MsG0780040374.01.T01:CDS | 35.0% | |
ATTCAACTGCAACTCAATTG+TGG | - | Chr7:76702211-76702230 | None:intergenic | 35.0% | |
CAATGATGACACACATTATC+GGG | - | Chr7:76703049-76703068 | None:intergenic | 35.0% | |
CAATGTGTCACATCAAGATT+CGG | - | Chr7:76702854-76702873 | None:intergenic | 35.0% | |
CGTCAATTTAATGATGAGGT+AGG | - | Chr7:76702886-76702905 | None:intergenic | 35.0% | |
CTATAAAGAAAGCCACCTTT+GGG | + | Chr7:76702039-76702058 | MsG0780040374.01.T01:CDS | 35.0% | |
GACTTGCATAACAAGTATCA+AGG | + | Chr7:76704017-76704036 | MsG0780040374.01.T01:CDS | 35.0% | |
GATCAGTAATCATCATCAAG+TGG | + | Chr7:76701993-76702012 | MsG0780040374.01.T01:CDS | 35.0% | |
GCTTCGTCAATTTAATGATG+AGG | - | Chr7:76702890-76702909 | None:intergenic | 35.0% | |
GGATAATTGGAGAAAAACCA+AGG | + | Chr7:76701970-76701989 | MsG0780040374.01.T01:CDS | 35.0% | |
GTTGAACCTTCAAAGGAATA+TGG | + | Chr7:76703936-76703955 | MsG0780040374.01.T01:CDS | 35.0% | |
TCAGTAATCATCATCAAGTG+GGG | + | Chr7:76701995-76702014 | MsG0780040374.01.T01:CDS | 35.0% | |
TCATCCCAATTTACCACATT+GGG | - | Chr7:76703519-76703538 | None:intergenic | 35.0% | |
TCCATCCATGATAATCATTC+TGG | - | Chr7:76703974-76703993 | None:intergenic | 35.0% | |
TTATCATGGATGGAATCAGA+CGG | + | Chr7:76703980-76703999 | MsG0780040374.01.T01:CDS | 35.0% | |
TTCCACATCCAGATAAAGTT+CGG | - | Chr7:76703676-76703695 | None:intergenic | 35.0% | |
TTCCTTCTAGGTGTGATTAT+AGG | + | Chr7:76703337-76703356 | MsG0780040374.01.T01:intron | 35.0% | |
! | ATTGTTGTCATTTCTTTGGC+TGG | + | Chr7:76702604-76702623 | MsG0780040374.01.T01:intron | 35.0% |
! | CAAAACTTCTTTTCCCACAA+AGG | - | Chr7:76703432-76703451 | None:intergenic | 35.0% |
! | CTTTTGCATGTTTTCCTTCT+AGG | + | Chr7:76703325-76703344 | MsG0780040374.01.T01:intron | 35.0% |
! | GAGGGGAAATTTTTCTTATG+TGG | + | Chr7:76704223-76704242 | MsG0780040374.01.T01:CDS | 35.0% |
!! | AAATGGCGGTAATGGAAATT+GGG | + | Chr7:76704043-76704062 | MsG0780040374.01.T01:CDS | 35.0% |
!! | CTCACATTGATGATGTAGAT+TGG | + | Chr7:76703634-76703653 | MsG0780040374.01.T01:CDS | 35.0% |
!! | GATTTTGGCAATGTTCAAGT+TGG | + | Chr7:76702999-76703018 | MsG0780040374.01.T01:intron | 35.0% |
!! | GTGTTGGTTTAAAAATTGGC+TGG | + | Chr7:76702285-76702304 | MsG0780040374.01.T01:intron | 35.0% |
!! | TGGGGTGTTGGTTTAAAAAT+TGG | + | Chr7:76702281-76702300 | MsG0780040374.01.T01:intron | 35.0% |
!!! | CAATTTTGGTTTTGTGCTAG+TGG | + | Chr7:76702319-76702338 | MsG0780040374.01.T01:intron | 35.0% |
!!! | CTTGGTCATTTTTGTTGACA+AGG | - | Chr7:76702546-76702565 | None:intergenic | 35.0% |
!!! | TAGGATGAGTTTTGGTTTGA+TGG | + | Chr7:76702384-76702403 | MsG0780040374.01.T01:intron | 35.0% |
AAGGAATATGGTTGGCGAAA+TGG | + | Chr7:76703948-76703967 | MsG0780040374.01.T01:CDS | 40.0% | |
AGAGAATGGTACTAACCCAA+AGG | - | Chr7:76702057-76702076 | None:intergenic | 40.0% | |
ATGATGACACACATTATCGG+GGG | - | Chr7:76703047-76703066 | None:intergenic | 40.0% | |
CCAAAGGTGGCTTTCTTTAT+AGG | - | Chr7:76702041-76702060 | None:intergenic | 40.0% | |
CCTATAAAGAAAGCCACCTT+TGG | + | Chr7:76702038-76702057 | MsG0780040374.01.T01:CDS | 40.0% | |
CCTATTATCTGCGAACCAAA+AGG | - | Chr7:76703397-76703416 | None:intergenic | 40.0% | |
GAACAGAATTATGCTGCTCA+GGG | + | Chr7:76703849-76703868 | MsG0780040374.01.T01:CDS | 40.0% | |
GATGATGATTACTGATCCCT+TGG | - | Chr7:76701990-76702009 | None:intergenic | 40.0% | |
GCATCCCAATGTGGTAAATT+GGG | + | Chr7:76703512-76703531 | MsG0780040374.01.T01:CDS | 40.0% | |
GCCAGAATGATTATCATGGA+TGG | + | Chr7:76703970-76703989 | MsG0780040374.01.T01:CDS | 40.0% | |
GCTTTCTTTATAGGACGATG+AGG | - | Chr7:76702032-76702051 | None:intergenic | 40.0% | |
GTCATCCCAATTTACCACAT+TGG | - | Chr7:76703520-76703539 | None:intergenic | 40.0% | |
TAAGCCTCTTCTCACAAAAG+AGG | - | Chr7:76702429-76702448 | None:intergenic | 40.0% | |
TATGTATCTGCATCCCAATG+TGG | + | Chr7:76703503-76703522 | MsG0780040374.01.T01:CDS | 40.0% | |
TCCACATCCAGATAAAGTTC+GGG | - | Chr7:76703675-76703694 | None:intergenic | 40.0% | |
TCCTGTTGTTGAACCTTCAA+AGG | + | Chr7:76703929-76703948 | MsG0780040374.01.T01:CDS | 40.0% | |
TGAACAGAATTATGCTGCTC+AGG | + | Chr7:76703848-76703867 | MsG0780040374.01.T01:CDS | 40.0% | |
TGCATCCCAATGTGGTAAAT+TGG | + | Chr7:76703511-76703530 | MsG0780040374.01.T01:CDS | 40.0% | |
! | ATTAGTGCCATGATGATGTC+CGG | - | Chr7:76704126-76704145 | None:intergenic | 40.0% |
! | CTCTTGAATCAGTCCTTTTC+CGG | + | Chr7:76703765-76703784 | MsG0780040374.01.T01:CDS | 40.0% |
! | CTTTGATTTCATGTCGTCTG+TGG | + | Chr7:76702798-76702817 | MsG0780040374.01.T01:intron | 40.0% |
! | GTTTTGCATGATCATCAGGT+TGG | + | Chr7:76702660-76702679 | MsG0780040374.01.T01:intron | 40.0% |
! | TAATGGAAATTGGGGAGCAT+GGG | + | Chr7:76704052-76704071 | MsG0780040374.01.T01:CDS | 40.0% |
! | TCCTTTGAAGGTTCAACAAC+AGG | - | Chr7:76703933-76703952 | None:intergenic | 40.0% |
! | TGGTGTTTTGCATGATCATC+AGG | + | Chr7:76702656-76702675 | MsG0780040374.01.T01:intron | 40.0% |
! | TTGTCATTTCTTTGGCTGGT+GGG | + | Chr7:76702608-76702627 | MsG0780040374.01.T01:intron | 40.0% |
!! | AATGGCGGTAATGGAAATTG+GGG | + | Chr7:76704044-76704063 | MsG0780040374.01.T01:CDS | 40.0% |
!! | GAAATGGCGGTAATGGAAAT+TGG | + | Chr7:76704042-76704061 | MsG0780040374.01.T01:CDS | 40.0% |
!!! | CCTTTTGGTTCGCAGATAAT+AGG | + | Chr7:76703394-76703413 | MsG0780040374.01.T01:CDS | 40.0% |
!!! | TTTGGTTTTGTGCTAGTGGT+AGG | + | Chr7:76702323-76702342 | MsG0780040374.01.T01:intron | 40.0% |
AATAACCCCGGACATCATCA+TGG | + | Chr7:76704116-76704135 | MsG0780040374.01.T01:CDS | 45.0% | |
AGAATTATGCTGCTCAGGGA+TGG | + | Chr7:76703853-76703872 | MsG0780040374.01.T01:CDS | 45.0% | |
AGAGAGAGAGAGAGAGAGAA+TGG | - | Chr7:76702071-76702090 | None:intergenic | 45.0% | |
ATGTCGTGGTCTAATAACCC+CGG | + | Chr7:76704104-76704123 | MsG0780040374.01.T01:CDS | 45.0% | |
CAACATGGAAGAAAAAGGCG+AGG | + | Chr7:76703716-76703735 | MsG0780040374.01.T01:CDS | 45.0% | |
CAAGGAAGAAATGGCGGTAA+TGG | + | Chr7:76704035-76704054 | MsG0780040374.01.T01:CDS | 45.0% | |
CCACATCCAGATAAAGTTCG+GGG | - | Chr7:76703674-76703693 | None:intergenic | 45.0% | |
CCATGGCGAAAGGTAATAGA+AGG | + | Chr7:76703471-76703490 | MsG0780040374.01.T01:CDS | 45.0% | |
CCTTCTATTACCTTTCGCCA+TGG | - | Chr7:76703474-76703493 | None:intergenic | 45.0% | |
CGCCAACCATATTCCTTTGA+AGG | - | Chr7:76703945-76703964 | None:intergenic | 45.0% | |
GAATGGTACTAACCCAAAGG+TGG | - | Chr7:76702054-76702073 | None:intergenic | 45.0% | |
GAATTATGCTGCTCAGGGAT+GGG | + | Chr7:76703854-76703873 | MsG0780040374.01.T01:CDS | 45.0% | |
GTTTCCAACAGTGCCTTTGT+GGG | + | Chr7:76703416-76703435 | MsG0780040374.01.T01:CDS | 45.0% | |
TGGAATCAGACGGAGCAATA+TGG | + | Chr7:76703990-76704009 | MsG0780040374.01.T01:CDS | 45.0% | |
TGTGTGTGACTCATGTGACA+GGG | + | Chr7:76702476-76702495 | MsG0780040374.01.T01:intron | 45.0% | |
! | AATCGATTGGCTCAGTTCCA+TGG | + | Chr7:76703454-76703473 | MsG0780040374.01.T01:CDS | 45.0% |
! | CATGCCTCTTTTGTGAGAAG+AGG | + | Chr7:76702422-76702441 | MsG0780040374.01.T01:intron | 45.0% |
! | CGCCTTTTTCTTCCATGTTG+CGG | - | Chr7:76703716-76703735 | None:intergenic | 45.0% |
! | CTTTTTCTTCCATGTTGCGG+CGG | - | Chr7:76703713-76703732 | None:intergenic | 45.0% |
! | GTAATGGAAATTGGGGAGCA+TGG | + | Chr7:76704051-76704070 | MsG0780040374.01.T01:CDS | 45.0% |
! | GTTGTCATTTCTTTGGCTGG+TGG | + | Chr7:76702607-76702626 | MsG0780040374.01.T01:intron | 45.0% |
! | TCAACAACAGGAGCACGATA+TGG | - | Chr7:76703921-76703940 | None:intergenic | 45.0% |
! | TTAGTGCCATGATGATGTCC+GGG | - | Chr7:76704125-76704144 | None:intergenic | 45.0% |
! | TTTTTCTTCCATGTTGCGGC+GGG | - | Chr7:76703712-76703731 | None:intergenic | 45.0% |
!! | TCAATGTGAGTGTCGAGATC+AGG | - | Chr7:76703624-76703643 | None:intergenic | 45.0% |
!! | TGCATGATCATCAGGTTGGT+TGG | + | Chr7:76702664-76702683 | MsG0780040374.01.T01:intron | 45.0% |
!!! | AGGTTTTGGGCTGAGATCAA+CGG | + | Chr7:76703576-76703595 | MsG0780040374.01.T01:CDS | 45.0% |
!!! | TTTTCCCACAAAGGCACTGT+TGG | - | Chr7:76703423-76703442 | None:intergenic | 45.0% |
!!! | ATTTTAATTTAATTTTTCTT+AGG | + | Chr7:76702365-76702384 | MsG0780040374.01.T01:intron | 5.0% |
AGAAGAAGAAGCGGAGGAAG+AGG | + | Chr7:76704167-76704186 | MsG0780040374.01.T01:CDS | 50.0% | |
AGAGGAAGAAGAAGAAGCGG+AGG | + | Chr7:76704161-76704180 | MsG0780040374.01.T01:CDS | 50.0% | |
ATCAGGCAATGGTATGTCGC+AGG | - | Chr7:76703607-76703626 | None:intergenic | 50.0% | |
CCCCGAACTTTATCTGGATG+TGG | + | Chr7:76703671-76703690 | MsG0780040374.01.T01:CDS | 50.0% | |
CGCCGCAACATGGAAGAAAA+AGG | + | Chr7:76703711-76703730 | MsG0780040374.01.T01:CDS | 50.0% | |
GGATGACTCTGCTGTCAAAG+AGG | + | Chr7:76703533-76703552 | MsG0780040374.01.T01:CDS | 50.0% | |
GGATGTGGAAAGAGAAGCAG+AGG | + | Chr7:76703686-76703705 | MsG0780040374.01.T01:CDS | 50.0% | |
GGTTTCCAACAGTGCCTTTG+TGG | + | Chr7:76703415-76703434 | MsG0780040374.01.T01:CDS | 50.0% | |
GTGGAAAAGGTAGCTACTCC+TGG | + | Chr7:76704242-76704261 | MsG0780040374.01.T01:CDS | 50.0% | |
GTGTGTGTGACTCATGTGAC+AGG | + | Chr7:76702475-76702494 | MsG0780040374.01.T01:intron | 50.0% | |
TCAGGCAATGGTATGTCGCA+GGG | - | Chr7:76703606-76703625 | None:intergenic | 50.0% | |
TCATCATCAAGTGGGGTCAC+TGG | + | Chr7:76702002-76702021 | MsG0780040374.01.T01:CDS | 50.0% | |
TGTCGACCCCGAACTTTATC+TGG | + | Chr7:76703665-76703684 | MsG0780040374.01.T01:CDS | 50.0% | |
! | AATCAGTCCTTTTCCGGTCC+TGG | + | Chr7:76703771-76703790 | MsG0780040374.01.T01:CDS | 50.0% |
! | TAGTGCCATGATGATGTCCG+GGG | - | Chr7:76704124-76704143 | None:intergenic | 50.0% |
!! | TCTTTGGCTGGTGGGTTGTT+AGG | + | Chr7:76702616-76702635 | MsG0780040374.01.T01:intron | 50.0% |
!! | TGAGTGTCGAGATCAGGCAA+TGG | - | Chr7:76703618-76703637 | None:intergenic | 50.0% |
AGAAGAAGCGGAGGAAGAGG+AGG | + | Chr7:76704170-76704189 | MsG0780040374.01.T01:CDS | 55.0% | |
AGGTAGCTACTCCTGGTGCA+TGG | + | Chr7:76704249-76704268 | MsG0780040374.01.T01:CDS | 55.0% | |
TGGATGGGGACCTACTGGAT+GGG | + | Chr7:76703791-76703810 | MsG0780040374.01.T01:CDS | 55.0% | |
TGGCTCAGTTCCATGGCGAA+AGG | + | Chr7:76703461-76703480 | MsG0780040374.01.T01:CDS | 55.0% | |
! | AGTCCTTTTCCGGTCCTGGA+TGG | + | Chr7:76703775-76703794 | MsG0780040374.01.T01:CDS | 55.0% |
! | GGAAATTGGGGAGCATGGGA+TGG | + | Chr7:76704056-76704075 | MsG0780040374.01.T01:CDS | 55.0% |
! | GTCCTTTTCCGGTCCTGGAT+GGG | + | Chr7:76703776-76703795 | MsG0780040374.01.T01:CDS | 55.0% |
! | TCCTTTTCCGGTCCTGGATG+GGG | + | Chr7:76703777-76703796 | MsG0780040374.01.T01:CDS | 55.0% |
AGAAGCGGAGGAAGAGGAGG+AGG | + | Chr7:76704173-76704192 | MsG0780040374.01.T01:CDS | 60.0% | |
AGAGGAGGAGGAGGAGGAAG+AGG | + | Chr7:76704185-76704204 | MsG0780040374.01.T01:CDS | 60.0% | |
AGGTGGAGGAGGAGGAAGGA+GGG | + | Chr7:76704205-76704224 | MsG0780040374.01.T01:CDS | 60.0% | |
AGTAGGTCCCCATCCAGGAC+CGG | - | Chr7:76703787-76703806 | None:intergenic | 60.0% | |
ATGGGGACCTACTGGATGGG+GGG | + | Chr7:76703794-76703813 | MsG0780040374.01.T01:CDS | 60.0% | |
CATCCAGTAGGTCCCCATCC+AGG | - | Chr7:76703792-76703811 | None:intergenic | 60.0% | |
CTGGATGGGGACCTACTGGA+TGG | + | Chr7:76703790-76703809 | MsG0780040374.01.T01:CDS | 60.0% | |
GAAGAGGTGGAGGAGGAGGA+AGG | + | Chr7:76704201-76704220 | MsG0780040374.01.T01:CDS | 60.0% | |
GATGGGGACCTACTGGATGG+GGG | + | Chr7:76703793-76703812 | MsG0780040374.01.T01:CDS | 60.0% | |
GGATGGGGACCTACTGGATG+GGG | + | Chr7:76703792-76703811 | MsG0780040374.01.T01:CDS | 60.0% | |
TCCCCATCCAGGACCGGAAA+AGG | - | Chr7:76703781-76703800 | None:intergenic | 60.0% | |
TCTTCGTCCCCCCATCCAGT+AGG | - | Chr7:76703804-76703823 | None:intergenic | 60.0% | |
AGCGGAGGAAGAGGAGGAGG+AGG | + | Chr7:76704176-76704195 | MsG0780040374.01.T01:CDS | 65.0% | |
GAGGTGGAGGAGGAGGAAGG+AGG | + | Chr7:76704204-76704223 | MsG0780040374.01.T01:CDS | 65.0% | |
GGAGGAAGAGGAGGAGGAGG+AGG | + | Chr7:76704179-76704198 | MsG0780040374.01.T01:CDS | 65.0% | |
GGAGGAAGAGGTGGAGGAGG+AGG | + | Chr7:76704197-76704216 | MsG0780040374.01.T01:CDS | 65.0% | |
GGAGGAGGAAGAGGTGGAGG+AGG | + | Chr7:76704194-76704213 | MsG0780040374.01.T01:CDS | 65.0% | |
GGAGGAGGAGGAAGAGGTGG+AGG | + | Chr7:76704191-76704210 | MsG0780040374.01.T01:CDS | 65.0% | |
GGAGGAGGAGGAGGAAGAGG+TGG | + | Chr7:76704188-76704207 | MsG0780040374.01.T01:CDS | 65.0% | |
GGCGAGGCAGCCGTGATTCT+TGG | + | Chr7:76703732-76703751 | MsG0780040374.01.T01:CDS | 65.0% | |
GGTCCTGGATGGGGACCTAC+TGG | + | Chr7:76703786-76703805 | MsG0780040374.01.T01:CDS | 65.0% | |
GGTGGAGGAGGAGGAAGGAG+GGG | + | Chr7:76704206-76704225 | MsG0780040374.01.T01:CDS | 65.0% | |
AGCAGAGGCCCGCCGCAACA+TGG | + | Chr7:76703701-76703720 | MsG0780040374.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 76701968 | 76704274 | 76701968 | ID=MsG0780040374.01;Name=MsG0780040374.01 |
Chr7 | mRNA | 76701968 | 76704274 | 76701968 | ID=MsG0780040374.01.T01;Parent=MsG0780040374.01;Name=MsG0780040374.01.T01;_AED=0.45;_eAED=0.53;_QI=0|0|0|1|0|0.33|3|0|355 |
Chr7 | exon | 76701968 | 76702060 | 76701968 | ID=MsG0780040374.01.T01:exon:14691;Parent=MsG0780040374.01.T01 |
Chr7 | exon | 76702387 | 76702433 | 76702387 | ID=MsG0780040374.01.T01:exon:14692;Parent=MsG0780040374.01.T01 |
Chr7 | exon | 76703347 | 76704274 | 76703347 | ID=MsG0780040374.01.T01:exon:14693;Parent=MsG0780040374.01.T01 |
Chr7 | CDS | 76701968 | 76702060 | 76701968 | ID=MsG0780040374.01.T01:cds;Parent=MsG0780040374.01.T01 |
Chr7 | CDS | 76702387 | 76702433 | 76702387 | ID=MsG0780040374.01.T01:cds;Parent=MsG0780040374.01.T01 |
Chr7 | CDS | 76703347 | 76704274 | 76703347 | ID=MsG0780040374.01.T01:cds;Parent=MsG0780040374.01.T01 |
Gene Sequence |
Protein sequence |