AlfalfaGEDB | MsG0080047791.01

M. sativa cultivar ZhongmuNo.1 / MsG0080047791.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080047791.01.T01	GAU44650.1	92.683	41	3	0	96	136	21	61	3.76E-17	81.6

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080047791.01.T01	A0A2Z6P658	92.683	41	3	0	96	136	21	61	1.79e-17	81.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047791.01	MsG0080048152.01	0.807971	3.895037e-50	2.199810e-47
MsG0080047791.01	MsG0080049011.01	0.803767	2.979517e-49	1.509981e-46
MsG0080047791.01	MsG0180000205.01	0.820950	5.232031e-53	4.199503e-50
MsG0080047791.01	MsG0180000355.01	0.808080	3.691071e-50	2.090697e-47
MsG0080047791.01	MsG0180000384.01	0.810705	1.009092e-50	6.126370e-48
MsG0080047791.01	MsG0180000544.01	-0.807709	4.427668e-50	2.483555e-47
MsG0080047791.01	MsG0180000568.01	0.812699	3.718215e-51	2.380423e-48
MsG0080047791.01	MsG0180000614.01	0.806257	8.982310e-50	4.853045e-47
MsG0080047791.01	MsG0180000982.01	0.823755	1.167600e-53	1.014511e-50
MsG0080047791.01	MsG0180001118.01	0.826285	2.950766e-54	2.755265e-51
MsG0080047791.01	MsG0180001886.01	0.839814	1.265451e-57	1.767890e-54
MsG0080047791.01	MsG0180002547.01	0.823668	1.223619e-53	1.060540e-50
MsG0080047791.01	MsG0180002794.01	0.811992	5.303052e-51	3.331344e-48
MsG0080047791.01	MsG0180003124.01	0.817658	2.941433e-52	2.155078e-49
MsG0080047791.01	MsG0180003697.01	0.819567	1.085569e-52	8.383950e-50
MsG0080047791.01	MsG0180003793.01	0.806232	9.092724e-50	4.909673e-47
MsG0080047791.01	MsG0180004046.01	0.803609	3.212314e-49	1.621417e-46
MsG0080047791.01	MsG0180004398.01	0.814917	1.206705e-51	8.201797e-49
MsG0080047791.01	MsG0180004481.01	0.818328	2.076101e-52	1.549327e-49
MsG0080047791.01	MsG0180004482.01	0.807764	4.309229e-50	2.420613e-47
MsG0080047791.01	MsG0180004750.01	0.815987	6.973666e-52	4.880949e-49
MsG0080047791.01	MsG0180004861.01	0.808800	2.592421e-50	1.496298e-47
MsG0080047791.01	MsG0180005169.01	0.806674	7.336027e-50	4.005697e-47
MsG0080047791.01	MsG0180005193.01	0.807585	4.703146e-50	2.629479e-47
MsG0080047791.01	MsG0180005334.01	0.834103	3.636752e-56	4.272685e-53
MsG0080047791.01	MsG0180005787.01	0.805158	1.527592e-49	8.024030e-47
MsG0080047791.01	MsG0180005913.01	0.832774	7.800822e-56	8.807174e-53
MsG0080047791.01	MsG0180005990.01	0.821419	4.078768e-53	3.316582e-50
MsG0080047791.01	MsG0180006046.01	0.812736	3.649499e-51	2.338706e-48
MsG0080047791.01	MsG0180006096.01	0.816231	6.150805e-52	4.333811e-49
MsG0080047791.01	MsG0180006138.01	0.800089	1.697133e-48	7.832678e-46
MsG0080047791.01	MsG0180006144.01	0.812683	3.748091e-51	2.398538e-48
MsG0080047791.01	MsG0280006306.01	-0.840719	7.339190e-58	1.054595e-54
MsG0080047791.01	MsG0280006422.01	0.820978	5.154749e-53	4.140773e-50
MsG0080047791.01	MsG0280006593.01	0.823372	1.435087e-53	1.233244e-50
MsG0080047791.01	MsG0280007062.01	0.805095	1.574646e-49	8.257674e-47
MsG0080047791.01	MsG0280007193.01	-0.817381	3.397096e-52	2.470150e-49
MsG0080047791.01	MsG0280007847.01	0.842131	3.119048e-58	4.683610e-55
MsG0080047791.01	MsG0280008417.01	0.800666	1.295077e-48	6.065290e-46
MsG0080047791.01	MsG0280008429.01	0.856760	2.587379e-62	6.240364e-59
MsG0080047791.01	MsG0280008929.01	0.800190	1.619108e-48	7.491524e-46
MsG0080047791.01	MsG0280009353.01	0.821254	4.453033e-53	3.604110e-50
MsG0080047791.01	MsG0280010013.01	0.834326	3.197381e-56	3.782126e-53
MsG0080047791.01	MsG0280010205.01	0.803115	4.066528e-49	2.026567e-46
MsG0080047791.01	MsG0280010434.01	0.828132	1.065617e-54	1.049797e-51
MsG0080047791.01	MsG0280010595.01	0.825877	3.687964e-54	3.404024e-51
MsG0080047791.01	MsG0280010776.01	0.833546	5.010975e-56	5.789711e-53
MsG0080047791.01	MsG0280011371.01	0.816630	5.008670e-52	3.567731e-49
MsG0080047791.01	MsG0380011704.01	0.816446	5.508202e-52	3.903593e-49
MsG0080047791.01	MsG0380011747.01	0.839964	1.156335e-57	1.623165e-54
MsG0080047791.01	MsG0380012570.01	0.842526	2.450136e-58	3.725389e-55
MsG0080047791.01	MsG0380013085.01	0.815236	1.025324e-51	7.029562e-49
MsG0080047791.01	MsG0380014175.01	0.806024	1.005369e-49	5.399695e-47
MsG0080047791.01	MsG0380015027.01	0.867401	1.406745e-65	4.905686e-62
MsG0080047791.01	MsG0380015466.01	0.816037	6.798718e-52	4.765094e-49
MsG0080047791.01	MsG0380015818.01	0.818877	1.558416e-52	1.180797e-49
MsG0080047791.01	MsG0380016133.01	0.827855	1.242488e-54	1.214196e-51
MsG0080047791.01	MsG0380016559.01	0.847050	1.478016e-59	2.594582e-56
MsG0080047791.01	MsG0380016560.01	0.872100	4.122081e-67	1.703197e-63
MsG0080047791.01	MsG0380016671.01	0.802206	6.261978e-49	3.049253e-46
MsG0080047791.01	MsG0380016860.01	0.803263	3.789657e-49	1.895822e-46
MsG0080047791.01	MsG0380016886.01	0.800473	1.417941e-48	6.607942e-46
MsG0080047791.01	MsG0380017023.01	0.817950	2.527373e-52	1.866517e-49
MsG0080047791.01	MsG0380017540.01	0.805269	1.448106e-49	7.627968e-47
MsG0080047791.01	MsG0380018022.01	0.810242	1.270679e-50	7.619956e-48
MsG0080047791.01	MsG0380018033.01	0.828685	7.833962e-55	7.842805e-52
MsG0080047791.01	MsG0380018044.01	0.821619	3.667179e-53	2.998504e-50
MsG0080047791.01	MsG0480018104.01	0.813200	2.886451e-51	1.872722e-48
MsG0080047791.01	MsG0480018110.01	0.844104	9.297174e-59	1.485412e-55
MsG0080047791.01	MsG0480018214.01	0.827841	1.252055e-54	1.222950e-51
MsG0080047791.01	MsG0480018477.01	0.806816	6.845332e-50	3.751744e-47
MsG0080047791.01	MsG0480018906.01	0.806567	7.726001e-50	4.207331e-47
MsG0080047791.01	MsG0480018911.01	0.802713	4.923542e-49	2.428786e-46
MsG0080047791.01	MsG0480019380.01	0.846487	2.106337e-59	3.631458e-56
MsG0080047791.01	MsG0480021041.01	0.824787	6.681346e-54	5.978237e-51
MsG0080047791.01	MsG0480021280.01	0.816504	5.344393e-52	3.793630e-49
MsG0080047791.01	MsG0480021448.01	0.813335	2.696322e-51	1.755897e-48
MsG0080047791.01	MsG0480021453.01	0.806816	6.845332e-50	3.751744e-47
MsG0080047791.01	MsG0480021706.01	0.820747	5.824095e-53	4.647967e-50
MsG0080047791.01	MsG0480021750.01	0.827699	1.354656e-54	1.317666e-51
MsG0080047791.01	MsG0480021768.01	0.810736	9.939023e-51	6.039061e-48
MsG0080047791.01	MsG0480021776.01	-0.830341	3.101589e-55	3.258655e-52
MsG0080047791.01	MsG0480021994.01	0.823177	1.593937e-53	1.362360e-50
MsG0080047791.01	MsG0480022223.01	0.865237	6.832044e-65	2.206938e-61
MsG0080047791.01	MsG0480022672.01	0.821036	4.998824e-53	4.021978e-50
MsG0080047791.01	MsG0480022696.01	0.818544	1.854208e-52	1.392058e-49
MsG0080047791.01	MsG0480022711.01	0.813027	3.151207e-51	2.034975e-48
MsG0080047791.01	MsG0480022768.01	0.806519	7.909695e-50	4.302065e-47
MsG0080047791.01	MsG0480022780.01	0.811576	6.535169e-51	4.059984e-48
MsG0080047791.01	MsG0480023061.01	0.808837	2.544635e-50	1.470183e-47
MsG0080047791.01	MsG0480023162.01	0.804487	2.109548e-49	1.089044e-46
MsG0080047791.01	MsG0480023221.01	0.800385	1.477807e-48	6.871864e-46
MsG0080047791.01	MsG0480023356.01	0.815556	8.703702e-52	6.020178e-49
MsG0080047791.01	MsG0480023357.01	0.808797	2.595312e-50	1.497877e-47
MsG0080047791.01	MsG0480023652.01	0.814004	1.921056e-51	1.273936e-48
MsG0080047791.01	MsG0480023660.01	0.833242	5.969315e-56	6.834103e-53
MsG0080047791.01	MsG0480023814.01	0.806203	9.220322e-50	4.974867e-47
MsG0080047791.01	MsG0480023867.01	0.809645	1.708035e-50	1.008429e-47
MsG0080047791.01	MsG0480023994.01	0.816741	4.730151e-52	3.379540e-49
MsG0080047791.01	MsG0580024051.01	0.844533	7.126308e-59	1.153966e-55
MsG0080047791.01	MsG0580024084.01	0.829265	5.669246e-55	5.773748e-52
MsG0080047791.01	MsG0580024495.01	0.812020	5.229808e-51	3.287803e-48
MsG0080047791.01	MsG0580024619.01	0.831579	1.540943e-55	1.679356e-52
MsG0080047791.01	MsG0580024727.01	0.819390	1.191301e-52	9.154489e-50
MsG0080047791.01	MsG0580025268.01	0.830158	3.438105e-55	3.593155e-52
MsG0080047791.01	MsG0580025587.01	0.808374	3.196010e-50	1.824395e-47
MsG0080047791.01	MsG0580025756.01	0.866296	3.162816e-65	1.060670e-61
MsG0080047791.01	MsG0580026137.01	0.824481	7.884019e-54	6.991990e-51
MsG0080047791.01	MsG0580026301.01	0.827992	1.151502e-54	1.129811e-51
MsG0080047791.01	MsG0580026439.01	0.819736	9.930524e-53	7.705694e-50
MsG0080047791.01	MsG0580026485.01	0.861898	7.422441e-64	2.132750e-60
MsG0080047791.01	MsG0580026718.01	0.838401	2.940454e-57	3.933943e-54
MsG0080047791.01	MsG0580027605.01	0.822344	2.491076e-53	2.079529e-50
MsG0080047791.01	MsG0580028044.01	0.805349	1.393493e-49	7.355458e-47
MsG0080047791.01	MsG0580029514.01	-0.821417	4.082060e-53	3.319107e-50
MsG0080047791.01	MsG0580029717.01	0.855368	6.609828e-62	1.522703e-58
MsG0080047791.01	MsG0580029924.01	0.833106	6.450465e-56	7.355823e-53
MsG0080047791.01	MsG0680030320.01	0.805283	1.438724e-49	7.581041e-47
MsG0080047791.01	MsG0680030350.01	0.849712	2.711447e-60	5.185866e-57
MsG0080047791.01	MsG0680030415.01	0.827123	1.861424e-54	1.780499e-51
MsG0080047791.01	MsG0680030555.01	0.820108	8.162267e-53	6.400760e-50
MsG0080047791.01	MsG0680031000.01	0.808574	2.896401e-50	1.661965e-47
MsG0080047791.01	MsG0680031468.01	0.823583	1.280800e-53	1.107372e-50
MsG0080047791.01	MsG0680031628.01	0.804984	1.661097e-49	8.686421e-47
MsG0080047791.01	MsG0680031646.01	0.802862	4.585670e-49	2.270740e-46
MsG0080047791.01	MsG0680031967.01	0.803436	3.489073e-49	1.753254e-46
MsG0080047791.01	MsG0680033459.01	0.811988	5.313881e-51	3.337755e-48
MsG0080047791.01	MsG0680035765.01	0.847218	1.328822e-59	2.345155e-56
MsG0080047791.01	MsG0680035877.01	0.822274	2.586111e-53	2.154496e-50
MsG0080047791.01	MsG0680035888.01	0.810237	1.273861e-50	7.637997e-48
MsG0080047791.01	MsG0780036186.01	0.808694	2.730745e-50	1.571770e-47
MsG0080047791.01	MsG0780037082.01	0.800322	1.521999e-48	7.066126e-46
MsG0080047791.01	MsG0780037124.01	0.826135	3.202032e-54	2.977174e-51
MsG0080047791.01	MsG0780038400.01	0.823095	1.665613e-53	1.420392e-50
MsG0080047791.01	MsG0780038892.01	0.803252	3.810190e-49	1.905548e-46
MsG0080047791.01	MsG0780040374.01	0.803177	3.947544e-49	1.970507e-46
MsG0080047791.01	MsG0780040545.01	0.820102	8.187807e-53	6.419447e-50
MsG0080047791.01	MsG0780041137.01	0.819431	1.165591e-52	8.967799e-50
MsG0080047791.01	MsG0780041223.01	0.835135	2.001684e-56	2.425404e-53
MsG0080047791.01	MsG0780041268.01	0.835753	1.396594e-56	1.724059e-53
MsG0080047791.01	MsG0780041440.01	0.800162	1.639982e-48	7.582622e-46
MsG0080047791.01	MsG0880042033.01	0.816937	4.273522e-52	3.070013e-49
MsG0080047791.01	MsG0880042108.01	0.806196	9.249560e-50	4.989684e-47
MsG0080047791.01	MsG0880042134.01	0.823874	1.095151e-53	9.546862e-51
MsG0080047791.01	MsG0880042519.01	0.832623	8.504593e-56	9.558368e-53
MsG0080047791.01	MsG0880042857.01	0.801780	7.659622e-49	3.689689e-46
MsG0080047791.01	MsG0880043498.01	0.807629	4.604516e-50	2.577382e-47
MsG0080047791.01	MsG0880043749.01	0.836380	9.679448e-57	1.217727e-53
MsG0080047791.01	MsG0880044394.01	0.825163	5.444542e-54	4.924214e-51
MsG0080047791.01	MsG0880044975.01	0.849395	3.325039e-60	6.294458e-57
MsG0080047791.01	MsG0880045017.01	0.818162	2.263849e-52	1.681682e-49
MsG0080047791.01	MsG0880045684.01	0.820036	8.481013e-53	6.636524e-50
MsG0080047791.01	MsG0880046377.01	0.827169	1.814590e-54	1.738144e-51
MsG0080047791.01	MsG0880046517.01	0.811521	6.714710e-51	4.165719e-48
MsG0080047791.01	MsG0880046963.01	-0.818720	1.692150e-52	1.276491e-49
MsG0080047791.01	MsG0880047045.01	0.801492	8.776358e-49	4.197095e-46
MsG0080047791.01	MsG0880047052.01	0.817071	3.988866e-52	2.875876e-49
MsG0080047791.01	MsG0880047212.01	0.859292	4.574672e-63	1.202039e-59
MsG0080047791.01	MsG0880047427.01	0.825622	4.240022e-54	3.885063e-51
MsG0080047791.01	MsG0880047763.01	0.850024	2.218874e-60	4.288029e-57
MsG0080047791.01	MsG0880047764.01	0.806789	6.936666e-50	3.798957e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080047791.01.T01	MTR_4g134900	81.818	44	8	0	93	136	20	63	1.10e-17	72.4
MsG0080047791.01.T01	MTR_4g134900	75.000	44	7	1	1	44	1	40	4.99e-15	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080047791.01.T01	AT1G09794	63.636	44	12	1	1	44	1	40	9.25e-12	57.0

Find 16 sgRNAs with CRISPR-Local

Find 64 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCAGCAATTCAATAACTTTA+AGG	0.154340	contig103end:-18209	None:intergenic
TATGTTAGTGTTAATATAAT+TGG	0.164452	contig103end:+17477	MsG0080047791.01.T01:intron
CCTTAAAGTTATTGAATTGC+TGG	0.305156	contig103end:+18209	MsG0080047791.01.T01:CDS
TTGCGGGAGAAAGTTGTTCT+TGG	0.356092	contig103end:-17276	None:intergenic
ATAGCTTGGTTGGTGAGTTA+AGG	0.376035	contig103end:-18112	None:intergenic
TAGCTTGGTTGGTGAGTTAA+GGG	0.388206	contig103end:-18111	None:intergenic
ACTCACTGTGCTTCGCTCTC+TGG	0.391788	contig103end:+18264	MsG0080047791.01.T01:CDS
ATGTTAGTGTTAATATAATT+GGG	0.403039	contig103end:+17478	MsG0080047791.01.T01:intron
AGTATAATTCATCACTTACT+TGG	0.421958	contig103end:-18304	None:intergenic
CATTGTTGAAACAAAACTGT+TGG	0.465328	contig103end:+18145	MsG0080047791.01.T01:CDS
CAAAGAGCCTTGCAAGAAAG+AGG	0.485000	contig103end:+17229	MsG0080047791.01.T01:CDS
TTACAAGCCTCTTTCTTGCA+AGG	0.522587	contig103end:-17236	None:intergenic
AAGGTTTGAGAAAATGGGGC+AGG	0.531461	contig103end:+17202	None:intergenic
AAGTTTCTTATAATACTGCT+AGG	0.583345	contig103end:+18184	MsG0080047791.01.T01:CDS
GGAGAAAGTTGTTCTTGGAG+AGG	0.604134	contig103end:-17271	None:intergenic
ACAGTCTGACAGGAATGAAG+AGG	0.637824	contig103end:-17516	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTTTTATAAGCAAATAT+TGG	+	contig103end:18017-18036	MsG0080047791.01.T01:intron	10.0%
!!	AAAATCCCTAATAATATAAT+TGG	+	contig103end:17401-17420	MsG0080047791.01.T01:intron	15.0%
!!	AATTATATTAACACTAACAT+AGG	-	contig103end:17478-17497	None:intergenic	15.0%
!!	ATGTTAGTGTTAATATAATT+GGG	+	contig103end:17478-17497	MsG0080047791.01.T01:intron	15.0%
!!	TATGTTAGTGTTAATATAAT+TGG	+	contig103end:17477-17496	MsG0080047791.01.T01:intron	15.0%
!!	TCAATCCAATTATATTATTA+GGG	-	contig103end:17409-17428	None:intergenic	15.0%
!!	TTCAATCCAATTATATTATT+AGG	-	contig103end:17410-17429	None:intergenic	15.0%
!!!	TTAATGGTTATGTTAATTTT+TGG	+	contig103end:18044-18063	MsG0080047791.01.T01:intron	15.0%
!!	AAAATTCCAGTTTCTAATAT+TGG	-	contig103end:18002-18021	None:intergenic	20.0%
!!	CAAAACAAATCAAATGAAAT+AGG	-	contig103end:17444-17463	None:intergenic	20.0%
!!	TGACATAGTTAATTATAAGT+TGG	+	contig103end:17551-17570	MsG0080047791.01.T01:intron	20.0%
!!!	GTTTTTAATTAAAACAACCA+CGG	+	contig103end:17743-17762	MsG0080047791.01.T01:intron	20.0%
!!!	TTAATTTTTGGAATTGAACT+CGG	+	contig103end:18056-18075	MsG0080047791.01.T01:intron	20.0%
!	AAGTTTCTTATAATACTGCT+AGG	+	contig103end:18184-18203	MsG0080047791.01.T01:CDS	25.0%
!	AGCAAATATTGGTAAGTTAA+TGG	+	contig103end:18028-18047	MsG0080047791.01.T01:intron	25.0%
!	TAAAGAATACTTGAACACTA+CGG	+	contig103end:17821-17840	MsG0080047791.01.T01:intron	25.0%
!	TATATCACAATCAAAATCAG+TGG	-	contig103end:17377-17396	None:intergenic	25.0%
!	TATTTAATTAACAGTCTGAC+AGG	-	contig103end:17529-17548	None:intergenic	25.0%
!!	AAACAAAAACATACTTTTGC+GGG	-	contig103end:17295-17314	None:intergenic	25.0%
!!	AATGTTTTGTAAAGATAGCT+TGG	-	contig103end:18129-18148	None:intergenic	25.0%
!!	CAAACAAAAACATACTTTTG+CGG	-	contig103end:17296-17315	None:intergenic	25.0%
!!!	GTTTTCTAACTTTTCTAAGA+AGG	-	contig103end:17687-17706	None:intergenic	25.0%
	AGTTAGAAAACTTTCTTCTG+CGG	+	contig103end:17696-17715	MsG0080047791.01.T01:intron	30.0%
	CATTGTTGAAACAAAACTGT+TGG	+	contig103end:18145-18164	MsG0080047791.01.T01:CDS	30.0%
	CCAGCAATTCAATAACTTTA+AGG	-	contig103end:18212-18231	None:intergenic	30.0%
	CCTTAAAGTTATTGAATTGC+TGG	+	contig103end:18209-18228	MsG0080047791.01.T01:CDS	30.0%
!	TTTTGTAAAGATAGCTTGGT+TGG	-	contig103end:18125-18144	None:intergenic	30.0%
	ACAACGCCAATATTAGAAAC+TGG	+	contig103end:17993-18012	MsG0080047791.01.T01:intron	35.0%
	CAAATGATGCAAATGTCAGA+AGG	+	contig103end:17929-17948	MsG0080047791.01.T01:intron	35.0%
	CTTCTGACATTTGCATCATT+TGG	-	contig103end:17931-17950	None:intergenic	35.0%
	TATGCCGGAATAGAGTTTAA+TGG	-	contig103end:17637-17656	None:intergenic	35.0%
	TCCACCATTAAACTCTATTC+CGG	+	contig103end:17630-17649	MsG0080047791.01.T01:intron	35.0%
!!!	TTTTGGAATTGAACTCGGAA+GGG	+	contig103end:18061-18080	MsG0080047791.01.T01:intron	35.0%
!!!	TTTTTGGAATTGAACTCGGA+AGG	+	contig103end:18060-18079	MsG0080047791.01.T01:intron	35.0%
	GCACAGTGGTATCATCTAAA+TGG	+	contig103end:17953-17972	MsG0080047791.01.T01:intron	40.0%
	TCTAAATGGCTATGCCTATG+CGG	+	contig103end:17967-17986	MsG0080047791.01.T01:intron	40.0%
	TTACAAGCCTCTTTCTTGCA+AGG	-	contig103end:17239-17258	None:intergenic	40.0%
!!	ATAGCTTGGTTGGTGAGTTA+AGG	-	contig103end:18115-18134	None:intergenic	40.0%
!!	TAGCTTGGTTGGTGAGTTAA+GGG	-	contig103end:18114-18133	None:intergenic	40.0%
	AAAACTCTCTTCCTGGTGAC+TGG	+	contig103end:17784-17803	MsG0080047791.01.T01:intron	45.0%
	ACAGTCTGACAGGAATGAAG+AGG	-	contig103end:17519-17538	None:intergenic	45.0%
	CAAAGAGCCTTGCAAGAAAG+AGG	+	contig103end:17229-17248	MsG0080047791.01.T01:CDS	45.0%
	CCTACCAAACACCTTTCATG+AGG	-	contig103end:17724-17743	None:intergenic	45.0%
	GCCGGAATAGAGTTTAATGG+TGG	-	contig103end:17634-17653	None:intergenic	45.0%
	GGAGAAAGTTGTTCTTGGAG+AGG	-	contig103end:17274-17293	None:intergenic	45.0%
	GTGGATATGCAGAAGCCATT+GGG	-	contig103end:17615-17634	None:intergenic	45.0%
	TTGCGGGAGAAAGTTGTTCT+TGG	-	contig103end:17279-17298	None:intergenic	45.0%
!	AAATGTCAGAAGGTGCACAG+TGG	+	contig103end:17939-17958	MsG0080047791.01.T01:intron	45.0%
!	AAGGAGTGCGAAAACAGTCT+CGG	-	contig103end:17668-17687	None:intergenic	45.0%
!!	CCTCATGAAAGGTGTTTGGT+AGG	+	contig103end:17721-17740	MsG0080047791.01.T01:intron	45.0%
	ATTGGCGTTGTGTTCCGCAT+AGG	-	contig103end:17984-18003	None:intergenic	50.0%
	GCGCTGAAAAACTCTCTTCC+TGG	+	contig103end:17777-17796	MsG0080047791.01.T01:intron	50.0%
	GGTGGATATGCAGAAGCCAT+TGG	-	contig103end:17616-17635	None:intergenic	50.0%
	ACTCACTGTGCTTCGCTCTC+TGG	+	contig103end:18264-18283	MsG0080047791.01.T01:CDS	55.0%
	CTCTGATCTCACCAGTCACC+AGG	-	contig103end:17798-17817	None:intergenic	55.0%
	GAGTGCGAAAACAGTCTCGG+AGG	-	contig103end:17665-17684	None:intergenic	55.0%
	GCAGAAGCCATTGGGACAGA+GGG	-	contig103end:17607-17626	None:intergenic	55.0%
	GCGAAAACAGTCTCGGAGGT+TGG	-	contig103end:17661-17680	None:intergenic	55.0%
	TGCAGAAGCCATTGGGACAG+AGG	-	contig103end:17608-17627	None:intergenic	55.0%
	TGTAACGCCCTCTGTCCCAA+TGG	+	contig103end:17597-17616	MsG0080047791.01.T01:intron	55.0%
!	GTCTCGGAGGTTGGTTATGC+CGG	-	contig103end:17652-17671	None:intergenic	55.0%
!!	GGCGCCTCATGAAAGGTGTT+TGG	+	contig103end:17717-17736	MsG0080047791.01.T01:intron	55.0%
	CAGCGCAACTGTGATGTCCG+TGG	-	contig103end:17763-17782	None:intergenic	60.0%
	CTTCTGCGGCGCCTCATGAA+AGG	+	contig103end:17710-17729	MsG0080047791.01.T01:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
contig103end	gene	17215	18311	17215	ID=MsG0080047791.01;Name=MsG0080047791.01
contig103end	mRNA	17215	18311	17215	ID=MsG0080047791.01.T01;Parent=MsG0080047791.01;Name=MsG0080047791.01.T01;_AED=0.39;_eAED=0.61;_QI=0\|0\|0\|1\|0\|0\|3\|0\|136
contig103end	exon	17215	17351	17215	ID=MsG0080047791.01.T01:exon:2952;Parent=MsG0080047791.01.T01
contig103end	exon	17485	17528	17485	ID=MsG0080047791.01.T01:exon:2951;Parent=MsG0080047791.01.T01
contig103end	exon	18082	18311	18082	ID=MsG0080047791.01.T01:exon:2950;Parent=MsG0080047791.01.T01
contig103end	CDS	17215	17351	17215	ID=MsG0080047791.01.T01:cds;Parent=MsG0080047791.01.T01
contig103end	CDS	17485	17528	17485	ID=MsG0080047791.01.T01:cds;Parent=MsG0080047791.01.T01
contig103end	CDS	18082	18311	18082	ID=MsG0080047791.01.T01:cds;Parent=MsG0080047791.01.T01

Gene Sequence

>MsG0080047791.01.T01

ATGGGGCAGGAAAGCAAAGAGCCTTGCAAGAAAGAGGCTTGTAACATTCAAGCTTGCCTCTCCAAGAACAACTTTCTCCCGCAAAAGTATGTTTTTGTTTGTTTCGATTTTATTTATTTAATTTCTGTTTGCATATATGTTAATATAATTGGGTTAGAAGATCAATTACCTCTTCATTCCTGGATCTCGTGCTTAAAACTTCTTGAGTGTCCCTTAACTCACCAACCAAGCTATCTTTACAAAACATTGTTGAAACAAAACTGTTGGACTGAGTTGCTGTCTGAAGTTTCTTATAATACTGCTAGGTGCCTTAAAGTTATTGAATTGCTGGACTCTTGCTGCTCAAGATGCGATTATAATTCAACTCACTGTGCTTCGCTCTCTGGACTATTGAAGCAAAATTCCAAGTAA

Protein sequence

>MsG0080047791.01.T01

MGQESKEPCKKEACNIQACLSKNNFLPQKYVFVCFDFIYLISVCIYVNIIGLEDQLPLHSWISCLKLLECPLTHQPSYLYKTLLKQNCWTELLSEVSYNTARCLKVIELLDSCCSRCDYNSTHCASLSGLLKQNSK*