Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042134.01.T01 | XP_003626951.1 | 100 | 83 | 0 | 0 | 1 | 83 | 253 | 335 | 1.20E-52 | 178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042134.01.T01 | G7LF69 | 100.000 | 83 | 0 | 0 | 1 | 83 | 253 | 335 | 5.73e-53 | 178 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047791.01 | MsG0880042134.01 | 0.823874 | 1.095151e-53 | 9.546862e-51 |
| MsG0080048761.01 | MsG0880042134.01 | -0.816295 | 5.953419e-52 | 4.202269e-49 |
| MsG0080048849.01 | MsG0880042134.01 | 0.816628 | 5.014791e-52 | 3.571833e-49 |
| MsG0080049011.01 | MsG0880042134.01 | 0.814843 | 1.253088e-51 | 8.500437e-49 |
| MsG0080049069.01 | MsG0880042134.01 | 0.827449 | 1.555044e-54 | 1.501804e-51 |
| MsG0180000355.01 | MsG0880042134.01 | 0.812108 | 5.005385e-51 | 3.154194e-48 |
| MsG0180000544.01 | MsG0880042134.01 | -0.807925 | 3.982462e-50 | 2.246427e-47 |
| MsG0180000546.01 | MsG0880042134.01 | 0.803437 | 3.487551e-49 | 1.752530e-46 |
| MsG0180000790.01 | MsG0880042134.01 | 0.825217 | 5.286913e-54 | 4.788918e-51 |
| MsG0180000982.01 | MsG0880042134.01 | 0.801628 | 8.233185e-49 | 3.950588e-46 |
| MsG0180001118.01 | MsG0880042134.01 | 0.810707 | 1.008212e-50 | 6.121353e-48 |
| MsG0180003124.01 | MsG0880042134.01 | 0.828251 | 9.972753e-55 | 9.858374e-52 |
| MsG0180003189.01 | MsG0880042134.01 | 0.810580 | 1.074054e-50 | 6.498752e-48 |
| MsG0180003697.01 | MsG0880042134.01 | 0.811362 | 7.272469e-51 | 4.492473e-48 |
| MsG0180004025.01 | MsG0880042134.01 | 0.818807 | 1.616761e-52 | 1.222538e-49 |
| MsG0180005106.01 | MsG0880042134.01 | 0.800640 | 1.311031e-48 | 6.135874e-46 |
| MsG0180005193.01 | MsG0880042134.01 | 0.820021 | 8.547786e-53 | 6.686219e-50 |
| MsG0180005303.01 | MsG0880042134.01 | -0.801056 | 1.078220e-48 | 5.100069e-46 |
| MsG0180005397.01 | MsG0880042134.01 | 0.803368 | 3.604791e-49 | 1.808145e-46 |
| MsG0180005509.01 | MsG0880042134.01 | 0.820769 | 5.756846e-53 | 4.597175e-50 |
| MsG0180005787.01 | MsG0880042134.01 | 0.844501 | 7.268815e-59 | 1.175860e-55 |
| MsG0180005913.01 | MsG0880042134.01 | 0.812644 | 3.821177e-51 | 2.442843e-48 |
| MsG0180005990.01 | MsG0880042134.01 | 0.836565 | 8.688771e-57 | 1.099050e-53 |
| MsG0180006096.01 | MsG0880042134.01 | 0.834719 | 2.547569e-56 | 3.048323e-53 |
| MsG0180006144.01 | MsG0880042134.01 | 0.837144 | 6.181664e-57 | 7.957466e-54 |
| MsG0180006220.01 | MsG0880042134.01 | 0.835729 | 1.416471e-56 | 1.747321e-53 |
| MsG0280006306.01 | MsG0880042134.01 | -0.808988 | 2.363118e-50 | 1.370823e-47 |
| MsG0780040374.01 | MsG0880042134.01 | 0.802731 | 4.880447e-49 | 2.408713e-46 |
| MsG0780040566.01 | MsG0880042134.01 | -0.801417 | 9.092871e-49 | 4.340113e-46 |
| MsG0780040596.01 | MsG0880042134.01 | 0.800437 | 1.441598e-48 | 6.712487e-46 |
| MsG0780040858.01 | MsG0880042134.01 | 0.800090 | 1.696227e-48 | 7.828705e-46 |
| MsG0780041137.01 | MsG0880042134.01 | 0.802050 | 6.743520e-49 | 3.270799e-46 |
| MsG0780041729.01 | MsG0880042134.01 | -0.822351 | 2.482043e-53 | 2.072398e-50 |
| MsG0780041747.01 | MsG0880042134.01 | 0.826356 | 2.837850e-54 | 2.655238e-51 |
| MsG0880042031.01 | MsG0880042134.01 | 0.810949 | 8.935757e-51 | 5.460971e-48 |
| MsG0880042062.01 | MsG0880042134.01 | 0.820689 | 6.007800e-53 | 4.786573e-50 |
| MsG0880042065.01 | MsG0880042134.01 | 0.813651 | 2.297636e-51 | 1.509184e-48 |
| MsG0880042133.01 | MsG0880042134.01 | 0.838582 | 2.639902e-57 | 3.551617e-54 |
| MsG0880042134.01 | MsG0880042137.01 | 0.828498 | 8.692777e-55 | 8.655686e-52 |
| MsG0880042134.01 | MsG0880042622.01 | 0.806544 | 7.811887e-50 | 4.251694e-47 |
| MsG0880042134.01 | MsG0880042700.01 | 0.800721 | 1.261693e-48 | 5.917029e-46 |
| MsG0880042134.01 | MsG0880042857.01 | 0.818833 | 1.595022e-52 | 1.207032e-49 |
| MsG0880042134.01 | MsG0880042987.01 | -0.824731 | 6.886069e-54 | 6.151660e-51 |
| MsG0880042134.01 | MsG0880043498.01 | 0.805626 | 1.218913e-49 | 6.479989e-47 |
| MsG0880042134.01 | MsG0880043749.01 | 0.813068 | 3.086450e-51 | 1.995325e-48 |
| MsG0880042134.01 | MsG0880043867.01 | 0.817409 | 3.348383e-52 | 2.436548e-49 |
| MsG0880042134.01 | MsG0880044394.01 | 0.831175 | 1.937398e-55 | 2.086002e-52 |
| MsG0880042134.01 | MsG0880045387.01 | 0.819739 | 9.917151e-53 | 7.696003e-50 |
| MsG0880042134.01 | MsG0880045765.01 | 0.804801 | 1.814506e-49 | 9.444141e-47 |
| MsG0880042134.01 | MsG0880046377.01 | 0.835495 | 1.622908e-56 | 1.987995e-53 |
| MsG0880042134.01 | MsG0880046517.01 | 0.821385 | 4.151869e-53 | 3.372844e-50 |
| MsG0880042134.01 | MsG0880046963.01 | -0.826522 | 2.591256e-54 | 2.435810e-51 |
| MsG0880042134.01 | MsG0880047052.01 | 0.813356 | 2.667905e-51 | 1.738422e-48 |
| MsG0880042134.01 | MsG0880047212.01 | 0.806375 | 8.480648e-50 | 4.595673e-47 |
| MsG0880042134.01 | MsG0880047267.01 | 0.800685 | 1.283395e-48 | 6.013312e-46 |
| MsG0880042134.01 | MsG0880047703.01 | 0.807037 | 6.145482e-50 | 3.387498e-47 |
| MsG0880042134.01 | MsG0880047763.01 | 0.851708 | 7.442265e-61 | 1.519457e-57 |
| MsG0280010595.01 | MsG0880042134.01 | 0.845546 | 3.796503e-59 | 6.348851e-56 |
| MsG0280010776.01 | MsG0880042134.01 | 0.801450 | 8.954368e-49 | 4.277569e-46 |
| MsG0280011059.01 | MsG0880042134.01 | -0.801092 | 1.059830e-48 | 5.017745e-46 |
| MsG0280011371.01 | MsG0880042134.01 | 0.821498 | 3.911582e-53 | 3.187497e-50 |
| MsG0280011376.01 | MsG0880042134.01 | 0.805659 | 1.199957e-49 | 6.384562e-47 |
| MsG0380011531.01 | MsG0880042134.01 | 0.828241 | 1.002683e-54 | 9.909209e-52 |
| MsG0380011537.01 | MsG0880042134.01 | 0.823738 | 1.178354e-53 | 1.023392e-50 |
| MsG0380011669.01 | MsG0880042134.01 | 0.814851 | 1.248235e-51 | 8.469184e-49 |
| MsG0380011704.01 | MsG0880042134.01 | 0.800136 | 1.660093e-48 | 7.670900e-46 |
| MsG0380011895.01 | MsG0880042134.01 | 0.823209 | 1.566854e-53 | 1.340391e-50 |
| MsG0380012005.01 | MsG0880042134.01 | 0.824608 | 7.360249e-54 | 6.552424e-51 |
| MsG0380012570.01 | MsG0880042134.01 | 0.808535 | 2.953311e-50 | 1.692899e-47 |
| MsG0380013467.01 | MsG0880042134.01 | 0.837814 | 4.162043e-57 | 5.469745e-54 |
| MsG0380013853.01 | MsG0880042134.01 | 0.812795 | 3.541800e-51 | 2.273019e-48 |
| MsG0680030764.01 | MsG0880042134.01 | 0.805901 | 1.067401e-49 | 5.714701e-47 |
| MsG0680030992.01 | MsG0880042134.01 | 0.814851 | 1.248072e-51 | 8.468174e-49 |
| MsG0680031000.01 | MsG0880042134.01 | 0.817538 | 3.130828e-52 | 2.286299e-49 |
| MsG0680031334.01 | MsG0880042134.01 | 0.851186 | 1.045357e-60 | 2.098771e-57 |
| MsG0680031468.01 | MsG0880042134.01 | 0.832678 | 8.242882e-56 | 9.279325e-53 |
| MsG0680032510.01 | MsG0880042134.01 | -0.817962 | 2.512026e-52 | 1.855788e-49 |
| MsG0680032827.01 | MsG0880042134.01 | 0.821753 | 3.413733e-53 | 2.801930e-50 |
| MsG0680033459.01 | MsG0880042134.01 | 0.830290 | 3.192542e-55 | 3.349136e-52 |
| MsG0480018473.01 | MsG0880042134.01 | 0.809816 | 1.569227e-50 | 9.306397e-48 |
| MsG0480018847.01 | MsG0880042134.01 | 0.855559 | 5.816132e-62 | 1.348170e-58 |
| MsG0480018906.01 | MsG0880042134.01 | 0.808551 | 2.929622e-50 | 1.680052e-47 |
| MsG0480018911.01 | MsG0880042134.01 | 0.830855 | 2.320840e-55 | 2.475478e-52 |
| MsG0480019434.01 | MsG0880042134.01 | 0.827288 | 1.699832e-54 | 1.633926e-51 |
| MsG0480020024.01 | MsG0880042134.01 | 0.830323 | 3.132534e-55 | 3.289342e-52 |
| MsG0480021280.01 | MsG0880042134.01 | 0.830136 | 3.479506e-55 | 3.634171e-52 |
| MsG0480021750.01 | MsG0880042134.01 | 0.804983 | 1.662165e-49 | 8.691709e-47 |
| MsG0480021768.01 | MsG0880042134.01 | 0.816242 | 6.118963e-52 | 4.312658e-49 |
| MsG0480021776.01 | MsG0880042134.01 | -0.842018 | 3.340856e-58 | 4.998747e-55 |
| MsG0480023162.01 | MsG0880042134.01 | 0.831768 | 1.384518e-55 | 1.517431e-52 |
| MsG0480023370.01 | MsG0880042134.01 | 0.827213 | 1.771058e-54 | 1.698658e-51 |
| MsG0480023448.01 | MsG0880042134.01 | 0.805159 | 1.526825e-49 | 8.020134e-47 |
| MsG0480023638.01 | MsG0880042134.01 | 0.818704 | 1.705889e-52 | 1.286293e-49 |
| MsG0480023652.01 | MsG0880042134.01 | 0.836813 | 7.510858e-57 | 9.572807e-54 |
| MsG0480023660.01 | MsG0880042134.01 | 0.833403 | 5.442082e-56 | 6.260686e-53 |
| MsG0480023867.01 | MsG0880042134.01 | 0.801645 | 8.163902e-49 | 3.919139e-46 |
| MsG0480023994.01 | MsG0880042134.01 | 0.806423 | 8.284280e-50 | 4.494754e-47 |
| MsG0580024698.01 | MsG0880042134.01 | 0.804769 | 1.842628e-49 | 9.582477e-47 |
| MsG0580024775.01 | MsG0880042134.01 | 0.811093 | 8.316840e-51 | 5.101651e-48 |
| MsG0580024935.01 | MsG0880042134.01 | 0.813691 | 2.251156e-51 | 1.480248e-48 |
| MsG0580025756.01 | MsG0880042134.01 | 0.820240 | 7.614598e-53 | 5.991957e-50 |
| MsG0380015166.01 | MsG0880042134.01 | 0.801935 | 7.119368e-49 | 3.442949e-46 |
| MsG0380015216.01 | MsG0880042134.01 | 0.809256 | 2.070106e-50 | 1.209543e-47 |
| MsG0380015703.01 | MsG0880042134.01 | 0.808069 | 3.711779e-50 | 2.101764e-47 |
| MsG0380016133.01 | MsG0880042134.01 | 0.802214 | 6.240116e-49 | 3.039219e-46 |
| MsG0380016182.01 | MsG0880042134.01 | 0.806505 | 7.963409e-50 | 4.329714e-47 |
| MsG0380016191.01 | MsG0880042134.01 | -0.806951 | 6.408507e-50 | 3.524511e-47 |
| MsG0380016560.01 | MsG0880042134.01 | 0.814041 | 1.885758e-51 | 1.251783e-48 |
| MsG0380016740.01 | MsG0880042134.01 | 0.822764 | 1.989393e-53 | 1.680727e-50 |
| MsG0380016820.01 | MsG0880042134.01 | 0.809085 | 2.252739e-50 | 1.310246e-47 |
| MsG0380017023.01 | MsG0880042134.01 | 0.837671 | 4.529821e-57 | 5.927307e-54 |
| MsG0380017085.01 | MsG0880042134.01 | 0.850004 | 2.246820e-60 | 4.339101e-57 |
| MsG0380017126.01 | MsG0880042134.01 | 0.840575 | 8.006141e-58 | 1.145251e-54 |
| MsG0380017178.01 | MsG0880042134.01 | -0.819509 | 1.118761e-52 | 8.626541e-50 |
| MsG0380017198.01 | MsG0880042134.01 | 0.808078 | 3.695763e-50 | 2.093208e-47 |
| MsG0380017878.01 | MsG0880042134.01 | -0.810236 | 1.274093e-50 | 7.639292e-48 |
| MsG0380017891.01 | MsG0880042134.01 | -0.823405 | 1.409651e-53 | 1.212519e-50 |
| MsG0380018022.01 | MsG0880042134.01 | 0.824484 | 7.872973e-54 | 6.982667e-51 |
| MsG0480018214.01 | MsG0880042134.01 | 0.842975 | 1.861266e-58 | 2.869668e-55 |
| MsG0480018402.01 | MsG0880042134.01 | 0.822860 | 1.889820e-53 | 1.600903e-50 |
| MsG0580026137.01 | MsG0880042134.01 | 0.802782 | 4.764854e-49 | 2.354697e-46 |
| MsG0580026301.01 | MsG0880042134.01 | 0.805545 | 1.267567e-49 | 6.724456e-47 |
| MsG0580026485.01 | MsG0880042134.01 | 0.805337 | 1.401358e-49 | 7.394659e-47 |
| MsG0580026718.01 | MsG0880042134.01 | 0.814374 | 1.591254e-51 | 1.065898e-48 |
| MsG0580027605.01 | MsG0880042134.01 | 0.810700 | 1.011911e-50 | 6.142569e-48 |
| MsG0580028033.01 | MsG0880042134.01 | 0.811620 | 6.391732e-51 | 3.975433e-48 |
| MsG0580029514.01 | MsG0880042134.01 | -0.829982 | 3.795686e-55 | 3.946736e-52 |
| MsG0580029717.01 | MsG0880042134.01 | 0.830550 | 2.757928e-55 | 2.915012e-52 |
| MsG0580029879.01 | MsG0880042134.01 | 0.822029 | 2.946730e-53 | 2.437679e-50 |
| MsG0580029925.01 | MsG0880042134.01 | 0.801608 | 8.309378e-49 | 3.985210e-46 |
| MsG0680030350.01 | MsG0880042134.01 | 0.810597 | 1.065136e-50 | 6.447786e-48 |
| MsG0680030415.01 | MsG0880042134.01 | 0.801620 | 8.262633e-49 | 3.963974e-46 |
| MsG0680030555.01 | MsG0880042134.01 | 0.836492 | 9.065832e-57 | 1.144279e-53 |
| MsG0680030636.01 | MsG0880042134.01 | 0.838480 | 2.805586e-57 | 3.762510e-54 |
| MsG0280007062.01 | MsG0880042134.01 | 0.804923 | 1.710741e-49 | 8.932609e-47 |
| MsG0280007193.01 | MsG0880042134.01 | -0.812057 | 5.133654e-51 | 3.230488e-48 |
| MsG0280007847.01 | MsG0880042134.01 | 0.806292 | 8.830947e-50 | 4.775367e-47 |
| MsG0280008928.01 | MsG0880042134.01 | 0.810471 | 1.134033e-50 | 6.841838e-48 |
| MsG0280008929.01 | MsG0880042134.01 | 0.822075 | 2.876255e-53 | 2.382441e-50 |
| MsG0280009054.01 | MsG0880042134.01 | 0.806956 | 6.393108e-50 | 3.516525e-47 |
| MsG0280009685.01 | MsG0880042134.01 | 0.804117 | 2.519314e-49 | 1.288322e-46 |
| MsG0280010013.01 | MsG0880042134.01 | 0.818788 | 1.632589e-52 | 1.233919e-49 |
| MsG0280010182.01 | MsG0880042134.01 | 0.801094 | 1.058726e-48 | 5.012834e-46 |
| MsG0280010204.01 | MsG0880042134.01 | 0.802584 | 5.233912e-49 | 2.573383e-46 |
| MsG0280010288.01 | MsG0880042134.01 | 0.842950 | 1.890235e-58 | 2.911921e-55 |
| MsG0680035765.01 | MsG0880042134.01 | 0.858477 | 8.022384e-63 | 2.050199e-59 |
| MsG0680035877.01 | MsG0880042134.01 | 0.805836 | 1.101176e-49 | 5.885914e-47 |
| MsG0780035957.01 | MsG0880042134.01 | 0.831545 | 1.570647e-55 | 1.710042e-52 |
| MsG0780036183.01 | MsG0880042134.01 | 0.811401 | 7.132769e-51 | 4.411049e-48 |
| MsG0780036288.01 | MsG0880042134.01 | 0.810100 | 1.363124e-50 | 8.144386e-48 |
| MsG0780036978.01 | MsG0880042134.01 | 0.808457 | 3.068710e-50 | 1.755535e-47 |
| MsG0780037082.01 | MsG0880042134.01 | 0.843161 | 1.661599e-58 | 2.576756e-55 |
| MsG0780037330.01 | MsG0880042134.01 | 0.819490 | 1.130226e-52 | 8.710199e-50 |
| MsG0780038911.01 | MsG0880042134.01 | 0.838394 | 2.952068e-57 | 3.948626e-54 |
| MsG0780039143.01 | MsG0880042134.01 | 0.837006 | 6.706122e-57 | 8.597097e-54 |
| MsG0780039439.01 | MsG0880042134.01 | 0.814553 | 1.452687e-51 | 9.778085e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042134.01.T01 | MTR_8g012420 | 100.000 | 83 | 0 | 0 | 1 | 83 | 253 | 335 | 1.45e-56 | 178 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 20 sgRNAs with CRISPR-Local
Find 19 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTAAAGAGGCTGTGAATT+TGG | 0.233214 | 8:+4185156 | MsG0880042134.01.T01:CDS |
| GGGTTCGAGGACGACATCTT+TGG | 0.387264 | 8:+4185010 | MsG0880042134.01.T01:CDS |
| GTTAAAGATATGTGTCCATA+TGG | 0.387690 | 8:+4184989 | None:intergenic |
| ACTTGAAGTGTTATGTTATG+AGG | 0.433392 | 8:+4185095 | MsG0880042134.01.T01:CDS |
| CTTATTAGCCCTTGCCCGAT+CGG | 0.435733 | 8:-4185052 | None:intergenic |
| GCACACCTCTGCAATGATCC+AGG | 0.438675 | 8:-4185124 | None:intergenic |
| AAGAGGCTGTGAATTTGGTT+AGG | 0.449980 | 8:+4185161 | MsG0880042134.01.T01:CDS |
| ATGTCGTCCTCGAACCCATA+TGG | 0.461362 | 8:-4185004 | None:intergenic |
| AACATGAAACCGATCGGGCA+AGG | 0.516793 | 8:+4185043 | MsG0880042134.01.T01:CDS |
| CGGGCAAGGGCTAATAAGAC+AGG | 0.537440 | 8:+4185057 | MsG0880042134.01.T01:CDS |
| TGCTAAATTGAGATCTAAAG+AGG | 0.547974 | 8:+4185144 | MsG0880042134.01.T01:CDS |
| AGGGCTAATAAGACAGGAAG+AGG | 0.551019 | 8:+4185063 | MsG0880042134.01.T01:CDS |
| TGAGTAACATGAAACCGATC+GGG | 0.557241 | 8:+4185038 | MsG0880042134.01.T01:CDS |
| TTAAAGATATGTGTCCATAT+GGG | 0.570422 | 8:+4184990 | None:intergenic |
| ACATGAAACCGATCGGGCAA+GGG | 0.575846 | 8:+4185044 | MsG0880042134.01.T01:CDS |
| TTGAGTAACATGAAACCGAT+CGG | 0.579919 | 8:+4185037 | MsG0880042134.01.T01:CDS |
| TATGTGTCCATATGGGTTCG+AGG | 0.583345 | 8:+4184997 | None:intergenic |
| TTCACCCTGGATCATTGCAG+AGG | 0.619675 | 8:+4185119 | MsG0880042134.01.T01:CDS |
| CACACCTCTGCAATGATCCA+GGG | 0.620978 | 8:-4185123 | None:intergenic |
| TATGTTATGAGGTTTCACCC+TGG | 0.650313 | 8:+4185106 | MsG0880042134.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TGCTAAATTGAGATCTAAAG+AGG | + | Chr8:4185144-4185163 | MsG0880042134.01.T01:CDS | 30.0% | |
| ! | ACTTGAAGTGTTATGTTATG+AGG | + | Chr8:4185095-4185114 | MsG0880042134.01.T01:CDS | 30.0% |
| ATCTAAAGAGGCTGTGAATT+TGG | + | Chr8:4185156-4185175 | MsG0880042134.01.T01:CDS | 35.0% | |
| TTGAGTAACATGAAACCGAT+CGG | + | Chr8:4185037-4185056 | MsG0880042134.01.T01:CDS | 35.0% | |
| ! | CTGCTCTTTTTAACAGTGAA+GGG | + | Chr8:4185194-4185213 | MsG0880042134.01.T01:CDS | 35.0% |
| ! | TCTGCTCTTTTTAACAGTGA+AGG | + | Chr8:4185193-4185212 | MsG0880042134.01.T01:CDS | 35.0% |
| AAGAGGCTGTGAATTTGGTT+AGG | + | Chr8:4185161-4185180 | MsG0880042134.01.T01:CDS | 40.0% | |
| TATGTTATGAGGTTTCACCC+TGG | + | Chr8:4185106-4185125 | MsG0880042134.01.T01:CDS | 40.0% | |
| TGAGTAACATGAAACCGATC+GGG | + | Chr8:4185038-4185057 | MsG0880042134.01.T01:CDS | 40.0% | |
| AGGGCTAATAAGACAGGAAG+AGG | + | Chr8:4185063-4185082 | MsG0880042134.01.T01:CDS | 45.0% | |
| AACATGAAACCGATCGGGCA+AGG | + | Chr8:4185043-4185062 | MsG0880042134.01.T01:CDS | 50.0% | |
| ACATGAAACCGATCGGGCAA+GGG | + | Chr8:4185044-4185063 | MsG0880042134.01.T01:CDS | 50.0% | |
| ATGTCGTCCTCGAACCCATA+TGG | - | Chr8:4185007-4185026 | None:intergenic | 50.0% | |
| CACACCTCTGCAATGATCCA+GGG | - | Chr8:4185126-4185145 | None:intergenic | 50.0% | |
| CTTATTAGCCCTTGCCCGAT+CGG | - | Chr8:4185055-4185074 | None:intergenic | 50.0% | |
| TTCACCCTGGATCATTGCAG+AGG | + | Chr8:4185119-4185138 | MsG0880042134.01.T01:CDS | 50.0% | |
| CGGGCAAGGGCTAATAAGAC+AGG | + | Chr8:4185057-4185076 | MsG0880042134.01.T01:CDS | 55.0% | |
| GCACACCTCTGCAATGATCC+AGG | - | Chr8:4185127-4185146 | None:intergenic | 55.0% | |
| GGGTTCGAGGACGACATCTT+TGG | + | Chr8:4185010-4185029 | MsG0880042134.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 4184998 | 4185249 | 4184998 | ID=MsG0880042134.01;Name=MsG0880042134.01 |
| Chr8 | mRNA | 4184998 | 4185249 | 4184998 | ID=MsG0880042134.01.T01;Parent=MsG0880042134.01;Name=MsG0880042134.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|83 |
| Chr8 | exon | 4184998 | 4185249 | 4184998 | ID=MsG0880042134.01.T01:exon:1707;Parent=MsG0880042134.01.T01 |
| Chr8 | CDS | 4184998 | 4185249 | 4184998 | ID=MsG0880042134.01.T01:cds;Parent=MsG0880042134.01.T01 |
| Gene Sequence |
| Protein sequence |
