AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043882.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043882.01.T01 MTR_8g042910 89.338 272 27 2 1 270 113 384 2.46e-163 474
MsG0880043882.01.T01 MTR_8g042910 94.000 150 9 0 288 437 467 616 2.24e-101 315
MsG0880043882.01.T01 MTR_3g010770 68.145 248 76 2 1 245 74 321 1.72e-107 329
MsG0880043882.01.T01 MTR_3g010770 76.667 150 35 0 284 433 426 575 5.53e-82 263
MsG0880043882.01.T01 MTR_7g108900 34.086 487 220 14 29 433 93 560 2.58e-68 227
MsG0880043882.01.T01 MTR_1g088020 31.693 508 260 13 1 433 60 555 1.11e-64 217
MsG0880043882.01.T01 MTR_7g108905 32.479 468 219 12 31 429 113 552 3.92e-64 216
MsG0880043882.01.T01 MTR_1g088225 31.299 508 260 14 1 433 60 553 1.27e-60 206
MsG0880043882.01.T01 MTR_0458s0010 31.315 479 263 13 1 433 60 518 3.83e-59 202
MsG0880043882.01.T01 MTR_1g008140 30.407 467 257 10 30 433 146 607 2.55e-52 185
MsG0880043882.01.T01 MTR_0458s0030 58.088 136 57 0 298 433 179 314 3.24e-51 175
MsG0880043882.01.T01 MTR_1g088040 58.088 136 57 0 298 433 179 314 3.24e-51 175
MsG0880043882.01.T01 MTR_1g054880 59.559 136 55 0 298 433 423 558 7.19e-51 181
MsG0880043882.01.T01 MTR_1g054880 36.818 220 127 4 29 245 94 304 1.12e-29 121
MsG0880043882.01.T01 MTR_3g091380 54.902 153 68 1 282 433 445 597 2.92e-50 179
MsG0880043882.01.T01 MTR_4g087980 50.000 162 80 1 275 435 357 518 6.87e-49 174
MsG0880043882.01.T01 MTR_2g044880 54.248 153 69 1 284 435 375 527 2.32e-48 173
MsG0880043882.01.T01 MTR_2g044810 54.815 135 61 0 299 433 331 465 3.13e-48 171
MsG0880043882.01.T01 MTR_4g025690 58.394 137 56 1 298 433 377 513 3.46e-48 172
MsG0880043882.01.T01 MTR_7g108875 56.618 136 59 0 298 433 429 564 9.74e-48 172
MsG0880043882.01.T01 MTR_7g108875 35.039 254 139 8 1 245 74 310 3.80e-34 134
MsG0880043882.01.T01 MTR_2g044810 54.815 135 61 0 299 433 400 534 1.10e-47 171
MsG0880043882.01.T01 MTR_7g108890 56.738 141 61 0 293 433 422 562 1.52e-46 169
MsG0880043882.01.T01 MTR_7g108890 30.769 325 185 9 1 318 72 363 1.45e-31 127
MsG0880043882.01.T01 MTR_4g124520 55.147 136 59 1 300 433 386 521 5.57e-46 166
MsG0880043882.01.T01 MTR_4g124520 30.857 175 88 4 71 245 124 265 1.08e-12 70.1
MsG0880043882.01.T01 MTR_8g104580 30.374 428 238 10 44 433 95 500 1.33e-45 165
MsG0880043882.01.T01 MTR_4g087970 50.993 151 73 1 284 433 367 517 1.59e-45 165
MsG0880043882.01.T01 MTR_8g023310 28.067 481 257 12 23 433 128 589 3.77e-45 166
MsG0880043882.01.T01 MTR_1g083520 55.000 140 60 1 298 434 390 529 5.23e-44 161
MsG0880043882.01.T01 MTR_1g083520 27.126 247 143 4 1 245 60 271 7.03e-22 98.6
MsG0880043882.01.T01 MTR_0618s0020 49.007 151 76 1 284 433 78 228 1.02e-43 153
MsG0880043882.01.T01 MTR_4g025730 54.074 135 59 2 300 433 377 509 6.02e-43 158
MsG0880043882.01.T01 MTR_8g104645 49.007 151 76 1 284 433 222 372 6.87e-43 155
MsG0880043882.01.T01 MTR_3g008640 48.684 152 76 2 284 433 376 527 1.03e-42 157
MsG0880043882.01.T01 MTR_8g104655 49.669 151 75 1 284 433 391 541 1.56e-42 157
MsG0880043882.01.T01 MTR_4g035980 50.685 146 69 3 290 433 395 539 3.93e-42 156
MsG0880043882.01.T01 MTR_3g008720 48.026 152 77 2 284 433 376 527 5.46e-42 155
MsG0880043882.01.T01 MTR_3g033690 48.684 152 76 2 284 433 375 526 6.13e-42 155
MsG0880043882.01.T01 MTR_7g053360 48.684 152 76 2 284 433 376 527 7.61e-42 155
MsG0880043882.01.T01 MTR_3g008700 47.368 152 78 2 284 433 376 527 1.82e-40 151
MsG0880043882.01.T01 MTR_4g025670 47.020 151 79 1 284 433 339 489 3.23e-40 150
MsG0880043882.01.T01 MTR_7g050950 48.299 147 74 1 289 433 407 553 1.60e-39 149
MsG0880043882.01.T01 MTR_7g050980 48.649 148 73 2 289 433 408 555 9.77e-39 147
MsG0880043882.01.T01 MTR_8g042900 50.365 137 64 1 297 433 449 581 1.68e-38 147
MsG0880043882.01.T01 MTR_8g042900 29.767 215 121 7 31 245 147 331 3.38e-11 65.5
MsG0880043882.01.T01 MTR_7g050870 48.649 148 73 2 289 433 407 554 3.90e-37 142
MsG0880043882.01.T01 MTR_3g010780 49.231 130 62 1 300 429 445 570 8.83e-37 142
MsG0880043882.01.T01 MTR_3g010780 28.111 217 122 8 31 245 140 324 7.87e-11 64.3
MsG0880043882.01.T01 MTR_7g112580 49.275 138 60 2 297 433 414 542 1.99e-36 140
MsG0880043882.01.T01 MTR_7g112580 27.803 223 137 6 23 245 98 296 9.34e-13 70.5
MsG0880043882.01.T01 MTR_4g124550 43.791 153 85 1 282 434 443 594 1.10e-34 136
MsG0880043882.01.T01 MTR_4g124550 27.389 314 169 10 28 326 143 412 3.70e-16 81.3
MsG0880043882.01.T01 MTR_7g110430 25.647 464 249 13 31 435 108 534 3.80e-34 134
MsG0880043882.01.T01 MTR_2g044660 48.551 138 67 2 297 434 500 633 1.86e-33 133
MsG0880043882.01.T01 MTR_1g086210 43.038 158 83 2 284 434 413 570 8.00e-33 130
MsG0880043882.01.T01 MTR_1g083510 43.226 155 82 3 282 432 430 582 4.24e-32 129
MsG0880043882.01.T01 MTR_1g086190 38.889 144 87 1 290 433 421 563 1.07e-30 124
MsG0880043882.01.T01 MTR_1g086190 25.965 285 183 9 25 304 106 367 7.14e-13 70.9
MsG0880043882.01.T01 MTR_7g112590 42.647 136 75 1 300 432 447 582 2.03e-30 124
MsG0880043882.01.T01 MTR_7g112590 27.542 236 130 9 31 251 123 332 2.61e-14 75.5
MsG0880043882.01.T01 MTR_3g095920 45.736 129 64 2 298 422 427 553 2.09e-30 124
MsG0880043882.01.T01 MTR_8g093460 44.186 129 66 2 298 422 414 540 1.19e-28 118
MsG0880043882.01.T01 MTR_7g110560 40.876 137 79 2 298 433 414 549 1.04e-27 115
MsG0880043882.01.T01 MTR_4g120290 22.605 522 276 15 1 432 88 571 1.03e-25 110
MsG0880043882.01.T01 MTR_8g023150 41.791 134 73 3 298 429 448 578 3.35e-25 108
MsG0880043882.01.T01 MTR_7g111560 37.415 147 80 4 297 435 416 558 1.04e-24 107
MsG0880043882.01.T01 MTR_1g083490 34.810 158 100 1 275 429 414 571 1.20e-24 107
MsG0880043882.01.T01 MTR_1g083470 35.220 159 98 3 275 429 409 566 1.31e-24 107
MsG0880043882.01.T01 MTR_1g083500 35.220 159 98 3 275 429 409 566 1.31e-24 107
MsG0880043882.01.T01 MTR_4g005170 35.849 159 97 3 275 429 414 571 1.51e-24 107
MsG0880043882.01.T01 MTR_7g110440 39.024 164 88 5 276 435 413 568 2.52e-24 105
MsG0880043882.01.T01 MTR_8g088610 34.459 148 95 2 284 430 227 373 1.87e-23 101
MsG0880043882.01.T01 MTR_4g005180 35.220 159 98 3 275 429 396 553 2.12e-23 103
MsG0880043882.01.T01 MTR_7g110490 38.889 144 78 3 298 437 433 570 3.99e-22 99.4
MsG0880043882.01.T01 MTR_7g110510 38.889 144 78 3 298 437 433 570 3.99e-22 99.4
MsG0880043882.01.T01 MTR_2g105560 35.556 135 85 2 300 433 206 339 4.52e-22 97.1
MsG0880043882.01.T01 MTR_5g083620 34.615 156 93 4 284 434 206 357 1.84e-21 95.5
MsG0880043882.01.T01 MTR_7g107180 34.815 135 86 2 300 433 174 307 4.67e-21 93.6
MsG0880043882.01.T01 MTR_2g436040 34.307 137 83 2 300 430 408 543 5.76e-21 95.9
MsG0880043882.01.T01 MTR_6g042660 26.389 288 137 8 171 396 22 296 1.74e-19 89.4
MsG0880043882.01.T01 MTR_2g436050 32.258 155 98 2 284 432 410 563 4.76e-19 90.1
MsG0880043882.01.T01 MTR_6g088810 35.156 128 72 2 295 422 261 377 1.65e-17 84.3
MsG0880043882.01.T01 MTR_0408s0030 37.113 97 52 1 300 396 36 123 2.74e-17 79.0
MsG0880043882.01.T01 MTR_4g120280 28.025 157 106 2 282 432 416 571 3.98e-17 84.0
MsG0880043882.01.T01 MTR_7g110420 33.562 146 89 3 298 435 435 580 5.57e-17 83.6
MsG0880043882.01.T01 MTR_8g102380 34.400 125 71 2 298 422 264 377 2.57e-16 80.5
MsG0880043882.01.T01 MTR_6g042690 37.113 97 52 1 300 396 216 303 5.53e-16 79.0
MsG0880043882.01.T01 MTR_5g095490 36.800 125 68 2 298 422 244 357 1.41e-15 78.2
MsG0880043882.01.T01 MTR_1g086540 33.065 124 72 2 299 422 232 344 1.79e-15 77.8
MsG0880043882.01.T01 MTR_6g024200 29.448 163 97 4 267 422 125 276 1.14e-14 74.3
MsG0880043882.01.T01 MTR_7g092780 33.835 133 73 3 290 422 270 387 1.30e-13 72.4
MsG0880043882.01.T01 MTR_6g024165 35.075 134 73 4 291 422 213 334 8.48e-13 69.7
MsG0880043882.01.T01 MTR_1g033050 32.990 97 56 1 300 396 197 284 1.12e-12 68.9
MsG0880043882.01.T01 MTR_6g012800 33.333 102 62 1 295 396 182 277 1.91e-12 68.2
MsG0880043882.01.T01 MTR_7g102570 31.193 109 65 2 294 402 16 114 2.24e-12 63.9
MsG0880043882.01.T01 MTR_2g033970 22.712 295 163 6 189 423 58 347 6.19e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043882.01.T01 AT3G10720 39.881 504 226 11 1 433 118 615 3.04e-109 335
MsG0880043882.01.T01 AT5G04970 39.087 504 230 11 1 433 123 620 4.46e-106 327
MsG0880043882.01.T01 AT3G10720 63.333 150 55 0 284 433 110 259 1.75e-66 213
MsG0880043882.01.T01 AT4G02330 58.088 136 57 0 298 433 436 571 3.09e-49 176
MsG0880043882.01.T01 AT4G02330 28.909 339 211 10 1 326 68 389 4.12e-31 125
MsG0880043882.01.T01 AT1G02810 58.088 136 57 0 298 433 442 577 4.80e-48 173
MsG0880043882.01.T01 AT1G02810 30.581 327 187 11 1 302 64 375 1.82e-28 118
MsG0880043882.01.T01 AT4G33220 51.634 153 73 1 284 435 252 404 9.04e-47 166
MsG0880043882.01.T01 AT4G33220 51.634 153 73 1 284 435 373 525 3.89e-46 167
MsG0880043882.01.T01 AT4G33220 29.412 221 130 7 31 245 68 268 2.62e-11 65.9
MsG0880043882.01.T01 AT2G26450 27.349 479 245 14 25 434 168 612 5.73e-46 168
MsG0880043882.01.T01 AT2G45220 52.318 151 69 3 284 433 363 511 9.42e-46 166
MsG0880043882.01.T01 AT3G43270 55.797 138 60 1 297 433 388 525 1.34e-45 166
MsG0880043882.01.T01 AT2G47550 54.412 136 62 0 298 433 423 558 5.82e-45 164
MsG0880043882.01.T01 AT2G47550 30.466 279 174 7 27 302 95 356 6.52e-24 104
MsG0880043882.01.T01 AT3G49220 50.980 153 74 1 284 435 446 598 2.48e-44 163
MsG0880043882.01.T01 AT3G49220 50.980 153 74 1 284 435 491 643 3.17e-44 164
MsG0880043882.01.T01 AT3G14310 51.370 146 70 1 289 433 447 592 5.71e-43 159
MsG0880043882.01.T01 AT2G43050 31.567 434 236 13 44 433 100 516 2.05e-42 157
MsG0880043882.01.T01 AT5G53370 50.340 147 72 1 288 433 439 585 2.61e-42 157
MsG0880043882.01.T01 AT3G59010 50.000 152 66 2 283 433 386 528 2.79e-42 157
MsG0880043882.01.T01 AT5G53370 50.340 147 72 1 288 433 475 621 3.21e-42 158
MsG0880043882.01.T01 AT1G53830 51.724 145 69 1 290 433 443 587 4.00e-42 157
MsG0880043882.01.T01 AT4G33230 29.399 449 230 11 53 434 179 607 5.80e-42 157
MsG0880043882.01.T01 AT4G03930 47.020 151 73 3 288 433 376 524 1.22e-40 152
MsG0880043882.01.T01 AT3G60730 47.682 151 78 1 284 433 369 519 1.40e-40 152
MsG0880043882.01.T01 AT3G60730 25.000 260 149 7 68 317 95 318 3.69e-13 71.6
MsG0880043882.01.T01 AT5G20860 28.059 474 223 15 33 433 110 538 1.91e-40 152
MsG0880043882.01.T01 AT3G05620 51.825 137 57 1 297 433 414 541 2.57e-40 151
MsG0880043882.01.T01 AT3G05620 26.957 230 132 6 23 245 96 296 6.08e-11 64.7
MsG0880043882.01.T01 AT1G11580 51.449 138 66 1 297 433 420 557 3.33e-40 151
MsG0880043882.01.T01 AT1G11580 25.581 301 173 10 30 326 121 374 5.24e-14 74.3
MsG0880043882.01.T01 AT1G11580 47.059 153 80 1 282 433 426 578 3.65e-40 151
MsG0880043882.01.T01 AT1G11580 25.581 301 173 10 30 326 142 395 4.91e-14 74.7
MsG0880043882.01.T01 AT2G26440 50.000 134 67 0 300 433 414 547 2.21e-39 149
MsG0880043882.01.T01 AT1G11590 45.695 151 75 3 288 433 376 524 4.68e-39 147
MsG0880043882.01.T01 AT3G10710 50.365 137 64 1 297 433 429 561 5.64e-39 148
MsG0880043882.01.T01 AT5G04960 51.493 134 60 2 297 429 431 560 6.96e-39 148
MsG0880043882.01.T01 AT3G27980 45.695 151 75 3 288 433 349 497 2.46e-38 145
MsG0880043882.01.T01 AT5G51490 51.079 139 65 3 298 433 398 536 3.36e-38 145
MsG0880043882.01.T01 AT4G02300 47.682 151 78 1 284 433 382 532 1.48e-36 140
MsG0880043882.01.T01 AT4G02320 45.946 148 79 1 284 430 368 515 3.23e-36 140
MsG0880043882.01.T01 AT5G51500 48.921 139 68 2 298 433 402 540 5.72e-36 139
MsG0880043882.01.T01 AT3G47400 48.201 139 69 2 298 433 456 594 1.05e-35 139
MsG0880043882.01.T01 AT5G49180 46.154 130 70 0 300 429 437 566 3.62e-35 137
MsG0880043882.01.T01 AT3G05610 44.203 138 77 0 300 437 432 569 3.86e-35 138
MsG0880043882.01.T01 AT4G00190 46.269 134 69 2 298 430 340 471 1.79e-34 134
MsG0880043882.01.T01 AT1G23200 41.722 151 78 2 284 433 413 554 1.25e-33 133
MsG0880043882.01.T01 AT5G27870 42.754 138 79 0 300 437 429 566 2.28e-33 133
MsG0880043882.01.T01 AT3G06830 40.136 147 88 0 284 430 419 565 8.20e-32 128
MsG0880043882.01.T01 AT1G53840 43.182 132 68 3 298 427 455 581 3.58e-29 120
MsG0880043882.01.T01 AT5G20860 42.636 129 71 2 288 413 362 490 3.39e-27 114
MsG0880043882.01.T01 AT3G14300 43.077 130 65 4 298 423 835 959 1.34e-26 113
MsG0880043882.01.T01 AT5G64640 38.571 140 80 2 290 425 464 601 1.50e-26 112
MsG0880043882.01.T01 AT4G15980 43.846 130 73 0 300 429 569 698 2.16e-26 112
MsG0880043882.01.T01 AT4G15980 43.846 130 73 0 300 429 579 708 3.20e-26 112
MsG0880043882.01.T01 AT5G09760 42.308 130 67 3 297 421 446 572 2.27e-25 109
MsG0880043882.01.T01 AT5G09760 42.308 130 67 3 297 421 420 546 3.17e-25 108
MsG0880043882.01.T01 AT2G47040 39.310 145 86 2 290 433 452 595 2.11e-22 100
MsG0880043882.01.T01 AT3G62170 36.424 151 94 2 284 433 439 588 3.54e-21 96.7
MsG0880043882.01.T01 AT2G47030 36.496 137 85 2 298 433 453 588 1.20e-19 92.0
MsG0880043882.01.T01 AT2G21610 32.800 125 73 2 298 422 224 337 2.72e-18 86.3
MsG0880043882.01.T01 AT2G21610 32.800 125 73 2 298 422 219 332 2.87e-18 86.3
MsG0880043882.01.T01 AT2G36710 31.538 130 78 2 298 427 272 390 9.32e-16 79.3
MsG0880043882.01.T01 AT5G19730 33.600 125 72 2 298 422 268 381 3.99e-15 77.0
MsG0880043882.01.T01 AT1G05310 31.884 138 79 3 290 427 271 393 1.36e-13 72.4
MsG0880043882.01.T01 AT1G11370 41.791 67 39 0 298 364 220 286 1.42e-13 71.2
MsG0880043882.01.T01 AT3G24130 31.008 129 78 2 300 428 217 334 4.14e-13 70.5
MsG0880043882.01.T01 AT5G18990 37.113 97 52 1 300 396 212 299 1.84e-12 68.6
MsG0880043882.01.T01 AT5G07430 32.308 130 76 4 294 422 237 355 3.29e-12 68.2
MsG0880043882.01.T01 AT3G17060 27.907 129 82 2 295 423 220 337 6.85e-12 67.0
MsG0880043882.01.T01 AT2G36700 30.400 125 76 2 298 422 220 333 8.45e-12 66.6
MsG0880043882.01.T01 AT5G55590 32.824 131 77 2 292 422 259 378 2.58e-11 65.5
MsG0880043882.01.T01 AT2G19150 32.800 125 73 2 298 422 219 332 6.07e-11 63.9

Find 65 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGGTGAGTTTGATAATTA+TGG 0.151521 8:-32033767 MsG0880043882.01.T01:CDS
AAGAAGAATATCTTGCTTAT+TGG 0.206210 8:-32034690 MsG0880043882.01.T01:CDS
GTTTATTTGCAATCATATAT+TGG 0.279888 8:-32033854 MsG0880043882.01.T01:CDS
GAAATTCCTGTGTTCTGATT+TGG 0.280507 8:+32033977 None:intergenic
TCTTCTGCCTTCAAATTATC+AGG 0.287742 8:+32034777 None:intergenic
CTGGTGCTATAACTCATAAT+AGG 0.296276 8:-32033742 MsG0880043882.01.T01:CDS
GGTGATTTAATTCAACCTTC+TGG 0.303001 8:-32033833 MsG0880043882.01.T01:CDS
GTGAAGTTCCAAGCTTGATT+AGG 0.372862 8:+32033689 None:intergenic
GATTGAAGCTGCAGATGATT+TGG 0.384083 8:-32033939 MsG0880043882.01.T01:CDS
TATGTTATTGTGAGTCTTGT+TGG 0.384776 8:-32034843 MsG0880043882.01.T01:CDS
ACAGAAAACTACACTTCTAT+TGG 0.387214 8:-32034819 MsG0880043882.01.T01:CDS
GAATTTCAATACAAAATTGT+AGG 0.393628 8:-32033961 MsG0880043882.01.T01:CDS
GTGTAAGGTACATCAGTATC+AGG 0.398032 8:+32033632 None:intergenic
AACCTTCTGGATGGTTAGAA+TGG 0.401213 8:-32033820 MsG0880043882.01.T01:CDS
GAGAAAGTCTTTGAATACTT+TGG 0.418166 8:+32036803 None:intergenic
TTTCTTATCTATGTCAAAGA+AGG 0.432591 8:-32034747 MsG0880043882.01.T01:CDS
CACCGATGTGTTGGTGGAAA+AGG 0.434972 8:-32036637 MsG0880043882.01.T01:CDS
TGGTGCTATAACTCATAATA+GGG 0.435985 8:-32033741 MsG0880043882.01.T01:CDS
TACAGAGAATGTGACATCTA+TGG 0.441861 8:-32034113 MsG0880043882.01.T01:CDS
AGCTGCACCTGATAATTTGA+AGG 0.445519 8:-32034784 MsG0880043882.01.T01:CDS
AATTCAACTAAGAATTACTT+AGG 0.450056 8:-32033905 MsG0880043882.01.T01:CDS
ATCGTCTAGTGCCGCAATCT+CGG 0.451993 8:+32036746 None:intergenic
AAATGTAGTCCTTCAGTGTA+AGG 0.452995 8:+32033617 None:intergenic
CTGACCTTGTAAGCCTTAGT+AGG 0.460092 8:+32036417 None:intergenic
TAATGACTCCTAATCAAGCT+TGG 0.467954 8:-32033697 MsG0880043882.01.T01:CDS
GACCATGGAAAGTGTATTCA+AGG 0.469948 8:-32033880 MsG0880043882.01.T01:CDS
CAAACAAGGTCTTCCTACTA+AGG 0.479222 8:-32036430 MsG0880043882.01.T01:CDS
TGTAGAATTGTCTGAGGGAA+TGG 0.482417 8:+32034132 None:intergenic
TAGAATGGAATGGAACAGTT+GGG 0.490562 8:-32033805 MsG0880043882.01.T01:CDS
CCTTTCGTGTCTTATACAGT+TGG 0.500763 8:+32034908 None:intergenic
CAATTGTATAGTATTTCACT+TGG 0.503200 8:-32036501 MsG0880043882.01.T01:CDS
AATATCTTGCTTATTGGTGA+TGG 0.511844 8:-32034684 MsG0880043882.01.T01:intron
CTTAAAGAAAGTGAAAATAG+AGG 0.512875 8:-32034882 MsG0880043882.01.T01:CDS
GTATAGTATTTCACTTGGGT+TGG 0.513615 8:-32036496 MsG0880043882.01.T01:CDS
GATAATTTGAAGGCAGAAGA+TGG 0.515759 8:-32034774 MsG0880043882.01.T01:CDS
CTAAGTAATCTACATTGAGC+TGG 0.522297 8:+32036709 None:intergenic
CTCGGCATGGTTAAGAGAAG+TGG 0.523798 8:+32036764 None:intergenic
TCTTCCTACTAAGGCTTACA+AGG 0.530926 8:-32036421 MsG0880043882.01.T01:CDS
TTCTACCGTTGCAGTTTCGA+AGG 0.533305 8:-32034176 MsG0880043882.01.T01:intron
GTCCTTGAATACACTTTCCA+TGG 0.545707 8:+32033878 None:intergenic
ATTTAATTCAACCTTCTGGA+TGG 0.546192 8:-32033829 MsG0880043882.01.T01:CDS
TAACAACACCGATGTGTTGG+TGG 0.552935 8:-32036643 MsG0880043882.01.T01:CDS
CAGCTGATTTAAGTTCATCT+CGG 0.554463 8:+32036679 None:intergenic
TCTGGATGGTTAGAATGGAA+TGG 0.564904 8:-32033815 MsG0880043882.01.T01:CDS
TTAGAATGGAATGGAACAGT+TGG 0.566790 8:-32033806 MsG0880043882.01.T01:CDS
TCTTAACCATGCCGAGATTG+CGG 0.571735 8:-32036757 MsG0880043882.01.T01:CDS
AAGCGTAAGACTCGCAAACA+AGG 0.581727 8:-32036444 MsG0880043882.01.T01:CDS
TTCCATTCTAACCATCCAGA+AGG 0.594789 8:+32033818 None:intergenic
CTATTATGAGTTATAGCACC+AGG 0.598060 8:+32033743 None:intergenic
AATGGACATAGAGTGTGTCT+TGG 0.606022 8:+32034150 None:intergenic
AATTGTATAGTATTTCACTT+GGG 0.612303 8:-32036500 MsG0880043882.01.T01:CDS
TGAAACTTATCTTAGTGCTG+TGG 0.613599 8:-32036613 MsG0880043882.01.T01:CDS
GAGTTTGATAATTATGGACC+TGG 0.614496 8:-32033761 MsG0880043882.01.T01:CDS
ACTGATGTACCTTACACTGA+AGG 0.618967 8:-32033626 MsG0880043882.01.T01:CDS
TTCTCTGTAGAATTGTCTGA+GGG 0.620308 8:+32034127 None:intergenic
ATTCTCTGTAGAATTGTCTG+AGG 0.621472 8:+32034126 None:intergenic
CTAGTGCCGCAATCTCGGCA+TGG 0.621885 8:+32036751 None:intergenic
AGAATTACTTAGGAAGACCA+TGG 0.635888 8:-32033895 MsG0880043882.01.T01:CDS
ACTGATCCAAATCAGAACAC+AGG 0.639047 8:-32033983 MsG0880043882.01.T01:CDS
TAACTCATAATAGGGTACAA+TGG 0.642097 8:-32033733 MsG0880043882.01.T01:CDS
CATAATAGGGTACAATGGCA+CGG 0.649224 8:-32033728 MsG0880043882.01.T01:CDS
AATTGTGTAACATTACTCAA+CGG 0.661988 8:+32036519 None:intergenic
CATGGTTAAGAGAAGTGGAG+TGG 0.677604 8:+32036769 None:intergenic
CCAACTGTATAAGACACGAA+AGG 0.694183 8:-32034908 MsG0880043882.01.T01:CDS
GTTGCAAGATTGAAGTACTG+CGG 0.720720 8:+32034061 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTAATGAAACAAAATA+AGG + Chr8:32034096-32034115 None:intergenic 10.0%
!!! GTAATTGTTTTTTAATTTTT+TGG + Chr8:32035318-32035337 None:intergenic 10.0%
!! AAAAATTCATATGAATATGA+TGG - Chr8:32034775-32034794 MsG0880043882.01.T01:CDS 15.0%
!! AACTAAAACAAATAAAAAGA+AGG - Chr8:32034799-32034818 MsG0880043882.01.T01:CDS 15.0%
!! ACAAGTTAATAATTTAAGTA+TGG - Chr8:32034853-32034872 MsG0880043882.01.T01:CDS 15.0%
!! ACATAAATTAAATGCATTTA+AGG + Chr8:32035346-32035365 None:intergenic 15.0%
!! ACTAAAACAAATAAAAAGAA+GGG - Chr8:32034800-32034819 MsG0880043882.01.T01:CDS 15.0%
!! ACTCAAAATAAATATTTGTA+AGG + Chr8:32034160-32034179 None:intergenic 15.0%
!! CTCAAAATAAATATTTGTAA+GGG + Chr8:32034159-32034178 None:intergenic 15.0%
!! TTAATTTAGTTACATTATGA+AGG - Chr8:32034395-32034414 MsG0880043882.01.T01:intron 15.0%
!!! AAATATATGTGTTCATTTTA+TGG - Chr8:32034422-32034441 MsG0880043882.01.T01:intron 15.0%
!! AATTCAACTAAGAATTACTT+AGG - Chr8:32036527-32036546 MsG0880043882.01.T01:CDS 20.0%
!! AATTGTATAGTATTTCACTT+GGG - Chr8:32033932-32033951 MsG0880043882.01.T01:CDS 20.0%
!! ATAACGTAAAATATGTTAAC+TGG - Chr8:32035083-32035102 MsG0880043882.01.T01:intron 20.0%
!! ATTTAACAGTAACATTATGA+AGG - Chr8:32035412-32035431 MsG0880043882.01.T01:intron 20.0%
!! ATTTATAAAGTAATGCTCTT+GGG + Chr8:32034222-32034241 None:intergenic 20.0%
!! GAATTTCAATACAAAATTGT+AGG - Chr8:32036471-32036490 MsG0880043882.01.T01:CDS 20.0%
!! GTTTATTTGCAATCATATAT+TGG - Chr8:32036578-32036597 MsG0880043882.01.T01:CDS 20.0%
!! TAAGTATGGAAATAATTCAT+TGG - Chr8:32034867-32034886 MsG0880043882.01.T01:CDS 20.0%
!! TGCATTATGCAAATAAATTA+AGG + Chr8:32036128-32036147 None:intergenic 20.0%
!! TTATGCAAATAAATTAAGGT+CGG + Chr8:32036124-32036143 None:intergenic 20.0%
!! TTGTAACAAAACAAAAGTAA+CGG + Chr8:32034679-32034698 None:intergenic 20.0%
!!! AATCATTATACTTGTTTTGA+TGG - Chr8:32033847-32033866 MsG0880043882.01.T01:CDS 20.0%
!!! ATATAAGAAGTTGATATAAC+TGG + Chr8:32035266-32035285 None:intergenic 20.0%
!!! ATCATTATACTTGTTTTGAT+GGG - Chr8:32033848-32033867 MsG0880043882.01.T01:CDS 20.0%
!!! ATTTTACATTAGGAAATACT+TGG - Chr8:32036774-32036793 MsG0880043882.01.T01:CDS 20.0%
!!! CACAACAATATTTCTTTTTA+TGG + Chr8:32035007-32035026 None:intergenic 20.0%
!!! TATAAGAAGTTGATATAACT+GGG + Chr8:32035265-32035284 None:intergenic 20.0%
! AAAGGTTGAAGAATTAAAAG+TGG + Chr8:32035823-32035842 None:intergenic 25.0%
! AAATATAACATCTCACATCT+CGG - Chr8:32035988-32036007 MsG0880043882.01.T01:intron 25.0%
! AAGAAGAATATCTTGCTTAT+TGG - Chr8:32035742-32035761 MsG0880043882.01.T01:intron 25.0%
! AATTGTGTAACATTACTCAA+CGG + Chr8:32033916-32033935 None:intergenic 25.0%
! ACGCAAATTAAATGTTTAGT+GGG - Chr8:32035056-32035075 MsG0880043882.01.T01:intron 25.0%
! AGCATTACTTTATAAATGTG+AGG - Chr8:32034225-32034244 MsG0880043882.01.T01:intron 25.0%
! ATTATATACAAGATGACAAG+TGG + Chr8:32035290-32035309 None:intergenic 25.0%
! CAATTGTATAGTATTTCACT+TGG - Chr8:32033931-32033950 MsG0880043882.01.T01:CDS 25.0%
! CATTTATAAAGTAATGCTCT+TGG + Chr8:32034223-32034242 None:intergenic 25.0%
! CTTAAAGAAAGTGAAAATAG+AGG - Chr8:32035550-32035569 MsG0880043882.01.T01:intron 25.0%
! TACGCAAATTAAATGTTTAG+TGG - Chr8:32035055-32035074 MsG0880043882.01.T01:intron 25.0%
! TTTCTTATCTATGTCAAAGA+AGG - Chr8:32035685-32035704 MsG0880043882.01.T01:intron 25.0%
! TTTGTTTGTTTGTGTCATAA+TGG - Chr8:32035206-32035225 MsG0880043882.01.T01:intron 25.0%
!! ACTGTGCTTAATTTTACATT+AGG - Chr8:32036764-32036783 MsG0880043882.01.T01:CDS 25.0%
!! CTTGGGTTATTGATTAAAAA+TGG + Chr8:32034205-32034224 None:intergenic 25.0%
!! GAAAAAATTTGACTTACCAA+AGG + Chr8:32035841-32035860 None:intergenic 25.0%
!! GTTCGTATATATGCTTTATT+AGG + Chr8:32035907-32035926 None:intergenic 25.0%
!! TATGGTGAGTTTGATAATTA+TGG - Chr8:32036665-32036684 MsG0880043882.01.T01:CDS 25.0%
!!! ACCTTAATAAGCTTTTTAAG+TGG + Chr8:32034045-32034064 None:intergenic 25.0%
!!! ACTTTTAATTCTTCAACCTT+TGG - Chr8:32035822-32035841 MsG0880043882.01.T01:intron 25.0%
!!! ATAAGAAGTTGATATAACTG+GGG + Chr8:32035264-32035283 None:intergenic 25.0%
!!! ATCCTCACATTTTTTTTTTG+TGG + Chr8:32034709-32034728 None:intergenic 25.0%
!!! GAATACTTTGGATAGTTTTT+TGG + Chr8:32033620-32033639 None:intergenic 25.0%
AAAAATGCTATAACAGCACA+AGG - Chr8:32036422-32036441 MsG0880043882.01.T01:CDS 30.0%
AAACTCTTAGAAATTGTGGT+TGG - Chr8:32034525-32034544 MsG0880043882.01.T01:intron 30.0%
AACTCTTAGAAATTGTGGTT+GGG - Chr8:32034526-32034545 MsG0880043882.01.T01:intron 30.0%
AATATCTTGCTTATTGGTGA+TGG - Chr8:32035748-32035767 MsG0880043882.01.T01:intron 30.0%
ACAGAAAACTACACTTCTAT+TGG - Chr8:32035613-32035632 MsG0880043882.01.T01:intron 30.0%
ATCTCGAAAGTCTTACATAA+TGG - Chr8:32034367-32034386 MsG0880043882.01.T01:intron 30.0%
ATTTAATTCAACCTTCTGGA+TGG - Chr8:32036603-32036622 MsG0880043882.01.T01:CDS 30.0%
CACCACAAAAAAAAAATGTG+AGG - Chr8:32034704-32034723 MsG0880043882.01.T01:CDS 30.0%
CATTTGTCACATTGTGAATA+AGG + Chr8:32034311-32034330 None:intergenic 30.0%
GAGAAAGTCTTTGAATACTT+TGG + Chr8:32033632-32033651 None:intergenic 30.0%
GCCACTTAAAAAGCTTATTA+AGG - Chr8:32034041-32034060 MsG0880043882.01.T01:CDS 30.0%
TAACTCATAATAGGGTACAA+TGG - Chr8:32036699-32036718 MsG0880043882.01.T01:CDS 30.0%
TCTCGAAAGTCTTACATAAT+GGG - Chr8:32034368-32034387 MsG0880043882.01.T01:intron 30.0%
TTAGAGTCTCTTCTTCTAAA+AGG - Chr8:32034501-32034520 MsG0880043882.01.T01:intron 30.0%
! ACATTTTGCAAGAAAACCAA+TGG - Chr8:32036392-32036411 MsG0880043882.01.T01:CDS 30.0%
! ATGTGTTCATTTTATGGCTA+AGG - Chr8:32034428-32034447 MsG0880043882.01.T01:intron 30.0%
! ATTTTTACTCAAAGCTTGAG+TGG + Chr8:32033962-32033981 None:intergenic 30.0%
! TATGTTATTGTGAGTCTTGT+TGG - Chr8:32035589-32035608 MsG0880043882.01.T01:intron 30.0%
!! AATTATTAACTTGTGCCTTG+AGG + Chr8:32034847-32034866 None:intergenic 30.0%
!! ATTATTAACTTGTGCCTTGA+GGG + Chr8:32034846-32034865 None:intergenic 30.0%
!! TAAGAAGTTGATATAACTGG+GGG + Chr8:32035263-32035282 None:intergenic 30.0%
!! TGGTGCTATAACTCATAATA+GGG - Chr8:32036691-32036710 MsG0880043882.01.T01:CDS 30.0%
!!! AGCATTTTTTGATTTGCCAT+TGG + Chr8:32036411-32036430 None:intergenic 30.0%
!!! GGGTTAGATACACTTTTTTA+TGG - Chr8:32036647-32036666 MsG0880043882.01.T01:CDS 30.0%
!!! TTATACTTGTTTTGATGGGT+TGG - Chr8:32033852-32033871 MsG0880043882.01.T01:CDS 30.0%
AAATGTAGTCCTTCAGTGTA+AGG + Chr8:32036818-32036837 None:intergenic 35.0%
AAGAAGAGACTCTAAACTAG+CGG + Chr8:32034496-32034515 None:intergenic 35.0%
AAGTTAGCTAAAACCTAGGT+TGG + Chr8:32035135-32035154 None:intergenic 35.0%
AGAATTACTTAGGAAGACCA+TGG - Chr8:32036537-32036556 MsG0880043882.01.T01:CDS 35.0%
AGGCAAACTCTTAGAAATTG+TGG - Chr8:32034521-32034540 MsG0880043882.01.T01:intron 35.0%
ATAACATTCAGAAACACAGC+AGG - Chr8:32036181-32036200 MsG0880043882.01.T01:intron 35.0%
ATTCTCTGTAGAATTGTCTG+AGG + Chr8:32036309-32036328 None:intergenic 35.0%
ATTTCTTAACATGTGCCCTA+GGG - Chr8:32034966-32034985 MsG0880043882.01.T01:intron 35.0%
CTAAGTAATCTACATTGAGC+TGG + Chr8:32033726-32033745 None:intergenic 35.0%
CTATTATGAGTTATAGCACC+AGG + Chr8:32036692-32036711 None:intergenic 35.0%
CTGGCAATGTGTTTATAAGT+GGG + Chr8:32034596-32034615 None:intergenic 35.0%
CTTCAGATTAAAGTCGTATC+TGG + Chr8:32036041-32036060 None:intergenic 35.0%
GAAATTCCTGTGTTCTGATT+TGG + Chr8:32036458-32036477 None:intergenic 35.0%
GATAATTTGAAGGCAGAAGA+TGG - Chr8:32035658-32035677 MsG0880043882.01.T01:intron 35.0%
GGTGATTTAATTCAACCTTC+TGG - Chr8:32036599-32036618 MsG0880043882.01.T01:CDS 35.0%
GTAAGACTTTCGAGATTTCA+AGG + Chr8:32034363-32034382 None:intergenic 35.0%
GTATAGTATTTCACTTGGGT+TGG - Chr8:32033936-32033955 MsG0880043882.01.T01:CDS 35.0%
GTTAATGATGTGTACGTGTT+AGG + Chr8:32035945-32035964 None:intergenic 35.0%
TAATGACTCCTAATCAAGCT+TGG - Chr8:32036735-32036754 MsG0880043882.01.T01:CDS 35.0%
TACAGAGAATGTGACATCTA+TGG - Chr8:32036319-32036338 MsG0880043882.01.T01:intron 35.0%
TAGAATGGAATGGAACAGTT+GGG - Chr8:32036627-32036646 MsG0880043882.01.T01:CDS 35.0%
TATAACAAGACTTGCATCAC+AGG - Chr8:32035771-32035790 MsG0880043882.01.T01:intron 35.0%
TCAGAAGTTAGCTAAAACCT+AGG + Chr8:32035139-32035158 None:intergenic 35.0%
TCTGGTGTTCAACATATGTT+TGG + Chr8:32036023-32036042 None:intergenic 35.0%
TCTTCTGCCTTCAAATTATC+AGG + Chr8:32035658-32035677 None:intergenic 35.0%
TGAAACTTATCTTAGTGCTG+TGG - Chr8:32033819-32033838 MsG0880043882.01.T01:CDS 35.0%
TGGCAATGTGTTTATAAGTG+GGG + Chr8:32034595-32034614 None:intergenic 35.0%
TGTGAGGATTAAAATGAGCT+TGG - Chr8:32034241-32034260 MsG0880043882.01.T01:intron 35.0%
TTAGAATGGAATGGAACAGT+TGG - Chr8:32036626-32036645 MsG0880043882.01.T01:CDS 35.0%
TTCTCTGTAGAATTGTCTGA+GGG + Chr8:32036308-32036327 None:intergenic 35.0%
! ACGACTTTAATCTGAAGTGT+CGG - Chr8:32036044-32036063 MsG0880043882.01.T01:intron 35.0%
! CAGCTGATTTAAGTTCATCT+CGG + Chr8:32033756-32033775 None:intergenic 35.0%
! GAGTTTGATAATTATGGACC+TGG - Chr8:32036671-32036690 MsG0880043882.01.T01:CDS 35.0%
! TTTTAACAACACCGATGTGT+TGG - Chr8:32033786-32033805 MsG0880043882.01.T01:CDS 35.0%
!! AAGAAGTTGATATAACTGGG+GGG + Chr8:32035262-32035281 None:intergenic 35.0%
!! CTGGTGCTATAACTCATAAT+AGG - Chr8:32036690-32036709 MsG0880043882.01.T01:CDS 35.0%
!! GGCACAGTTGATTTCATTTT+CGG - Chr8:32036340-32036359 MsG0880043882.01.T01:intron 35.0%
AACCTTCTGGATGGTTAGAA+TGG - Chr8:32036612-32036631 MsG0880043882.01.T01:CDS 40.0%
AATGGACATAGAGTGTGTCT+TGG + Chr8:32036285-32036304 None:intergenic 40.0%
ACTGATCCAAATCAGAACAC+AGG - Chr8:32036449-32036468 MsG0880043882.01.T01:CDS 40.0%
ACTGATGTACCTTACACTGA+AGG - Chr8:32036806-32036825 MsG0880043882.01.T01:CDS 40.0%
AGCTGCACCTGATAATTTGA+AGG - Chr8:32035648-32035667 MsG0880043882.01.T01:intron 40.0%
ATCATAGTGTGGTAGATGGT+TGG - Chr8:32035796-32035815 MsG0880043882.01.T01:intron 40.0%
ATGTTAACTGGCTAGATCCA+AGG - Chr8:32035095-32035114 MsG0880043882.01.T01:intron 40.0%
CAAACAAGGTCTTCCTACTA+AGG - Chr8:32034002-32034021 MsG0880043882.01.T01:CDS 40.0%
CATAATAGGGTACAATGGCA+CGG - Chr8:32036704-32036723 MsG0880043882.01.T01:CDS 40.0%
CATCACAGGAAATCATAGTG+TGG - Chr8:32035785-32035804 MsG0880043882.01.T01:intron 40.0%
CATTTCTTAACATGTGCCCT+AGG - Chr8:32034965-32034984 MsG0880043882.01.T01:intron 40.0%
CCAACTGTATAAGACACGAA+AGG - Chr8:32035524-32035543 MsG0880043882.01.T01:intron 40.0%
CCACTTATAAACACATTGCC+AGG - Chr8:32034594-32034613 MsG0880043882.01.T01:intron 40.0%
CCTGGCAATGTGTTTATAAG+TGG + Chr8:32034597-32034616 None:intergenic 40.0%
CCTTTCGTGTCTTATACAGT+TGG + Chr8:32035527-32035546 None:intergenic 40.0%
GAAACTGCAACGGTAGAATA+TGG + Chr8:32036254-32036273 None:intergenic 40.0%
GATCCAAGGAGGTTAAATTC+TGG - Chr8:32035109-32035128 MsG0880043882.01.T01:intron 40.0%
GATTGAAGCTGCAGATGATT+TGG - Chr8:32036493-32036512 MsG0880043882.01.T01:CDS 40.0%
GGAAATCATAGTGTGGTAGA+TGG - Chr8:32035792-32035811 MsG0880043882.01.T01:intron 40.0%
GGCAATGTGTTTATAAGTGG+GGG + Chr8:32034594-32034613 None:intergenic 40.0%
GTCCTTGAATACACTTTCCA+TGG + Chr8:32036557-32036576 None:intergenic 40.0%
GTGAAGTTCCAAGCTTGATT+AGG + Chr8:32036746-32036765 None:intergenic 40.0%
GTGTAAGGTACATCAGTATC+AGG + Chr8:32036803-32036822 None:intergenic 40.0%
TCGAGATTTCAAGGAACACA+GGG + Chr8:32034354-32034373 None:intergenic 40.0%
TCTGGATGGTTAGAATGGAA+TGG - Chr8:32036617-32036636 MsG0880043882.01.T01:CDS 40.0%
TCTTCCTACTAAGGCTTACA+AGG - Chr8:32034011-32034030 MsG0880043882.01.T01:CDS 40.0%
TGGAGAGAGATTTATAGCAG+TGG - Chr8:32036156-32036175 MsG0880043882.01.T01:intron 40.0%
TGTAGAATTGTCTGAGGGAA+TGG + Chr8:32036303-32036322 None:intergenic 40.0%
TGTTTCTTACTGCTACTGCT+TGG + Chr8:32036219-32036238 None:intergenic 40.0%
TTCCATTCTAACCATCCAGA+AGG + Chr8:32036617-32036636 None:intergenic 40.0%
TTCGAGATTTCAAGGAACAC+AGG + Chr8:32034355-32034374 None:intergenic 40.0%
! AACCTTTTCCACCAACACAT+CGG + Chr8:32033800-32033819 None:intergenic 40.0%
! GACCATGGAAAGTGTATTCA+AGG - Chr8:32036552-32036571 MsG0880043882.01.T01:CDS 40.0%
! TAACTTGTATCCTTCCCTCA+AGG - Chr8:32034829-32034848 MsG0880043882.01.T01:CDS 40.0%
! TGATTTCATTTTCGGCAACG+CGG - Chr8:32036348-32036367 MsG0880043882.01.T01:intron 40.0%
! TTGCATAATGCAGCTGTTTC+TGG - Chr8:32036136-32036155 MsG0880043882.01.T01:intron 40.0%
!! ACCTCACAAGTCGATTTTGT+GGG + Chr8:32034563-32034582 None:intergenic 40.0%
!! AGAAGTTGATATAACTGGGG+GGG + Chr8:32035261-32035280 None:intergenic 40.0%
!! GTTGCAAGATTGAAGTACTG+CGG + Chr8:32036374-32036393 None:intergenic 40.0%
!! TAGTGTTAACTTGTGCCCTA+GGG + Chr8:32034984-32035003 None:intergenic 40.0%
!! TTAACCGCAAGAGTGTTGTT+TGG - Chr8:32034275-32034294 MsG0880043882.01.T01:intron 40.0%
AAGAGACTCTAAACTAGCGG+CGG + Chr8:32034493-32034512 None:intergenic 45.0%
AAGCGTAAGACTCGCAAACA+AGG - Chr8:32033988-32034007 MsG0880043882.01.T01:CDS 45.0%
CATGGTTAAGAGAAGTGGAG+TGG + Chr8:32033666-32033685 None:intergenic 45.0%
CGAGATTTCAAGGAACACAG+GGG + Chr8:32034353-32034372 None:intergenic 45.0%
CTGACCTTGTAAGCCTTAGT+AGG + Chr8:32034018-32034037 None:intergenic 45.0%
GATGATTCCAGTGAGATGAG+TGG + Chr8:32034471-32034490 None:intergenic 45.0%
GCTTCCAAACAACACTCTTG+CGG + Chr8:32034282-32034301 None:intergenic 45.0%
GGTATCCTTCGAAACTGCAA+CGG + Chr8:32036264-32036283 None:intergenic 45.0%
GGTTAAATTCTGGCCAACCT+AGG - Chr8:32035119-32035138 MsG0880043882.01.T01:intron 45.0%
TAACAACACCGATGTGTTGG+TGG - Chr8:32033789-32033808 MsG0880043882.01.T01:CDS 45.0%
TCTTAACCATGCCGAGATTG+CGG - Chr8:32033675-32033694 MsG0880043882.01.T01:CDS 45.0%
TGAGTAGTATCTCAGTCACG+TGG - Chr8:32035162-32035181 MsG0880043882.01.T01:intron 45.0%
TGGCCAGAATTTAACCTCCT+TGG + Chr8:32035115-32035134 None:intergenic 45.0%
TTAACTGGCTAGATCCAAGG+AGG - Chr8:32035098-32035117 MsG0880043882.01.T01:intron 45.0%
TTAAGAGTCCCACATCGAAC+AGG + Chr8:32034626-32034645 None:intergenic 45.0%
TTCTACCGTTGCAGTTTCGA+AGG - Chr8:32036256-32036275 MsG0880043882.01.T01:intron 45.0%
! CGATTTTGTGGGGTTGAGTT+AGG + Chr8:32034552-32034571 None:intergenic 45.0%
! CGTGTTAGGTGTCATATGTC+TGG + Chr8:32035931-32035950 None:intergenic 45.0%
!! CAAAATCGACTTGTGAGGTG+AGG - Chr8:32034564-32034583 MsG0880043882.01.T01:intron 45.0%
!! CACCTCACAAGTCGATTTTG+TGG + Chr8:32034564-32034583 None:intergenic 45.0%
!! CCTCACAAGTCGATTTTGTG+GGG + Chr8:32034562-32034581 None:intergenic 45.0%
!! GAAGTTGATATAACTGGGGG+GGG + Chr8:32035260-32035279 None:intergenic 45.0%
!! GTAGTGTTAACTTGTGCCCT+AGG + Chr8:32034985-32035004 None:intergenic 45.0%
!! TTAACTTGTGCCTTGAGGGA+AGG + Chr8:32034842-32034861 None:intergenic 45.0%
!! TATAAAGAATAAATATTAAA+CGG - Chr8:32034747-32034766 MsG0880043882.01.T01:CDS 5.0%
ATCGTCTAGTGCCGCAATCT+CGG + Chr8:32033689-32033708 None:intergenic 50.0%
CTCGGCATGGTTAAGAGAAG+TGG + Chr8:32033671-32033690 None:intergenic 50.0%
GTGAGATGAGTGGAGCAGAA+TGG + Chr8:32034461-32034480 None:intergenic 50.0%
TTCTGCTCCACTCATCTCAC+TGG - Chr8:32034461-32034480 MsG0880043882.01.T01:intron 50.0%
! CACCGATGTGTTGGTGGAAA+AGG - Chr8:32033795-32033814 MsG0880043882.01.T01:CDS 50.0%
!! CCCCACAAAATCGACTTGTG+AGG - Chr8:32034559-32034578 MsG0880043882.01.T01:intron 50.0%
!!! GCTACTGCTTGGTGCTTTTG+AGG + Chr8:32036208-32036227 None:intergenic 50.0%
ACATCGAACAGGAGAAGGCC+TGG + Chr8:32034615-32034634 None:intergenic 55.0%
AGGCCTTCTCCTGTTCGATG+TGG - Chr8:32034614-32034633 MsG0880043882.01.T01:intron 55.0%
GGCCTTCTCCTGTTCGATGT+GGG - Chr8:32034615-32034634 MsG0880043882.01.T01:intron 55.0%
GTCCCACATCGAACAGGAGA+AGG + Chr8:32034620-32034639 None:intergenic 55.0%
GTTGATATAACTGGGGGGGG+TGG + Chr8:32035257-32035276 None:intergenic 55.0%
CTAGTGCCGCAATCTCGGCA+TGG + Chr8:32033684-32033703 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 32033607 32036847 32033607 ID=MsG0880043882.01;Name=MsG0880043882.01
Chr8 mRNA 32033607 32036847 32033607 ID=MsG0880043882.01.T01;Parent=MsG0880043882.01;Name=MsG0880043882.01.T01;_AED=0.19;_eAED=0.19;_QI=0|0|0|1|1|1|3|0|437
Chr8 exon 32036392 32036847 32036392 ID=MsG0880043882.01.T01:exon:7684;Parent=MsG0880043882.01.T01
Chr8 exon 32034685 32034964 32034685 ID=MsG0880043882.01.T01:exon:7683;Parent=MsG0880043882.01.T01
Chr8 exon 32033607 32034184 32033607 ID=MsG0880043882.01.T01:exon:7682;Parent=MsG0880043882.01.T01
Chr8 CDS 32036392 32036847 32036392 ID=MsG0880043882.01.T01:cds;Parent=MsG0880043882.01.T01
Chr8 CDS 32034685 32034964 32034685 ID=MsG0880043882.01.T01:cds;Parent=MsG0880043882.01.T01
Chr8 CDS 32033607 32034184 32033607 ID=MsG0880043882.01.T01:cds;Parent=MsG0880043882.01.T01
Gene Sequence

>MsG0880043882.01.T01

CTGAAACAAGCCAAAAAACTATCCAAAGTATTCAAAGACTTTCTCAAAAAACATCACCACTCCACTTCTCTTAACCATGCCGAGATTGCGGCACTAGACGATTGTAGTGAACTAAACCAGCTCAATGTAGATTACTTAGAGTTAGTCCGAGATGAACTTAAATCAGCTGATACTTCATCTTTTAACAACACCGATGTGTTGGTGGAAAAGGTTGAAACTTATCTTAGTGCTGTGGCTACTAATCATTATACTTGTTTTGATGGGTTGGTTGTGACTAAAAGTAACATTGCTAATGCACTTGCTGTGCCGTTGAGTAATGTTACACAATTGTATAGTATTTCACTTGGGTTGGCCACTCAAGCTTTGAGTAAAAATGTTAAGAAGCGTAAGACTCGCAAACAAGGTCTTCCTACTAAGGCTTACAAGGTCAGACAGCCACTTAAAAAGCTTATTAAGCTTCTTCACACGAAACACAGTTGCAATAACTCATCCAACTGTATAAGACACGAAAGGATTCTTAAAGAAAGTGAAAATAGAGGAATTTTACTGAAAGAATATGTTATTGTGAGTCTTGTTGGAACAGAAAACTACACTTCTATTGGTGAAGCTATTGAAGCTGCACCTGATAATTTGAAGGCAGAAGATGGCTATTTTCTTATCTATGTCAAAGAAGGAGTATATGAAGAATATGTTACTATTACAAAACATAAGAAGAATATCTTGCTTATTGGTGATGTTTCGAAGGATACCAAGACACACTCTATGTCCATTCCCTCAGACAATTCTACAGAGAATGTGACATCTATGGCACAGTTGATTTCATTTTCGGCAACGCGGCCGCAGTACTTCAATCTTGCAACATTTTGCAAGAAAACCAATGGCAAATCAAAAAATGCTATAACAGCACAAGGTAGAACTGATCCAAATCAGAACACAGGAATTTCAATACAAAATTGTAGGATTGAAGCTGCAGATGATTTGGCTGAAGATTTGAATTCAACTAAGAATTACTTAGGAAGACCATGGAAAGTGTATTCAAGGACTGTTTATTTGCAATCATATATTGGTGATTTAATTCAACCTTCTGGATGGTTAGAATGGAATGGAACAGTTGGGTTAGATACACTTTTTTATGGTGAGTTTGATAATTATGGACCTGGTGCTATAACTCATAATAGGGTACAATGGCACGGTTACAATTTAATGACTCCTAATCAAGCTTGGAACTTCACTGTGCTTAATTTTACATTAGGAAATACTTGGCTTCCTGATACTGATGTACCTTACACTGAAGGACTACATTTAGATAATTGA

Protein sequence

>MsG0880043882.01.T01

LKQAKKLSKVFKDFLKKHHHSTSLNHAEIAALDDCSELNQLNVDYLELVRDELKSADTSSFNNTDVLVEKVETYLSAVATNHYTCFDGLVVTKSNIANALAVPLSNVTQLYSISLGLATQALSKNVKKRKTRKQGLPTKAYKVRQPLKKLIKLLHTKHSCNNSSNCIRHERILKESENRGILLKEYVIVSLVGTENYTSIGEAIEAAPDNLKAEDGYFLIYVKEGVYEEYVTITKHKKNILLIGDVSKDTKTHSMSIPSDNSTENVTSMAQLISFSATRPQYFNLATFCKKTNGKSKNAITAQGRTDPNQNTGISIQNCRIEAADDLAEDLNSTKNYLGRPWKVYSRTVYLQSYIGDLIQPSGWLEWNGTVGLDTLFYGEFDNYGPGAITHNRVQWHGYNLMTPNQAWNFTVLNFTLGNTWLPDTDVPYTEGLHLDN*