AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027854.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027854.01.T01 MTR_5g064120 96.516 287 5 2 1 286 1 283 0.0 546
MsG0580027854.01.T01 MTR_3g116130 59.585 193 73 4 7 199 20 207 2.82e-59 191
MsG0580027854.01.T01 MTR_3g116130 59.896 192 72 4 8 199 21 207 7.38e-59 192
MsG0580027854.01.T01 MTR_4g035310 63.636 121 38 2 9 127 9 125 3.20e-47 159
MsG0580027854.01.T01 MTR_4g035310 63.636 121 38 2 9 127 9 125 3.51e-47 159
MsG0580027854.01.T01 MTR_8g024520 77.273 88 20 0 7 94 16 103 7.49e-46 156
MsG0580027854.01.T01 MTR_8g024520 77.273 88 20 0 7 94 16 103 7.90e-46 156
MsG0580027854.01.T01 MTR_7g117495 73.333 90 24 0 8 97 10 99 1.52e-44 152
MsG0580027854.01.T01 MTR_7g117495 73.333 90 24 0 8 97 10 99 1.60e-44 152
MsG0580027854.01.T01 MTR_3g092490 70.330 91 26 1 9 99 19 108 1.16e-42 144
MsG0580027854.01.T01 MTR_3g092490 69.565 92 27 1 8 99 18 108 2.28e-41 143
MsG0580027854.01.T01 MTR_3g092490 69.565 92 27 1 8 99 18 108 2.34e-41 143
MsG0580027854.01.T01 MTR_2g026180 40.367 109 49 3 17 110 5 112 2.23e-21 94.0
MsG0580027854.01.T01 MTR_2g026180 29.530 149 95 2 17 159 107 251 1.82e-13 70.5
MsG0580027854.01.T01 MTR_4g088010 48.193 83 43 0 12 94 72 154 3.39e-18 84.0
MsG0580027854.01.T01 MTR_8g463890 44.578 83 46 0 12 94 69 151 4.80e-18 84.0
MsG0580027854.01.T01 MTR_8g463890 31.967 122 75 2 12 125 161 282 7.55e-13 68.6
MsG0580027854.01.T01 MTR_7g088140 41.667 84 49 0 11 94 122 205 7.19e-17 80.9
MsG0580027854.01.T01 MTR_3g055990 41.096 73 42 1 12 84 2 73 7.40e-17 80.5
MsG0580027854.01.T01 MTR_3g055990 41.096 73 42 1 12 84 2 73 7.64e-17 80.5
MsG0580027854.01.T01 MTR_7g088140 41.667 84 49 0 11 94 122 205 1.65e-16 79.7
MsG0580027854.01.T01 MTR_1g073690 38.750 80 48 1 12 91 2 80 5.85e-16 77.8
MsG0580027854.01.T01 MTR_5g088220 39.759 83 50 0 12 94 161 243 1.67e-15 76.6
MsG0580027854.01.T01 MTR_4g070190 44.737 76 41 1 17 91 9 84 2.80e-15 72.4
MsG0580027854.01.T01 MTR_5g097580 40.000 75 44 1 17 91 7 80 2.82e-14 73.2
MsG0580027854.01.T01 MTR_5g097580 40.000 75 44 1 17 91 7 80 3.54e-14 72.8
MsG0580027854.01.T01 MTR_4g070140 43.421 76 42 1 17 91 9 84 3.64e-14 69.7
MsG0580027854.01.T01 MTR_2g026180 29.530 149 95 2 17 159 37 181 1.11e-13 70.9
MsG0580027854.01.T01 MTR_4g070080 41.892 74 42 1 17 89 7 80 1.17e-13 67.0
MsG0580027854.01.T01 MTR_3g084040 40.580 69 41 0 16 84 36 104 2.51e-13 66.6
MsG0580027854.01.T01 MTR_4g070080 41.892 74 42 1 17 89 7 80 2.82e-13 66.6
MsG0580027854.01.T01 MTR_3g084040 40.909 66 39 0 16 81 36 101 3.30e-13 65.1
MsG0580027854.01.T01 MTR_4g109540 40.964 83 47 2 16 97 42 123 4.39e-13 68.2
MsG0580027854.01.T01 MTR_4g063560 42.254 71 40 1 16 85 33 103 9.81e-13 63.9
MsG0580027854.01.T01 MTR_3g080130 37.037 81 41 2 16 96 36 106 1.40e-12 64.3
MsG0580027854.01.T01 MTR_3g025880 40.449 89 51 2 10 97 38 125 1.62e-12 67.8
MsG0580027854.01.T01 MTR_7g013740 40.964 83 47 2 17 98 41 122 2.09e-12 63.9
MsG0580027854.01.T01 MTR_7g105260 34.831 89 54 1 17 105 33 117 4.08e-12 63.2
MsG0580027854.01.T01 MTR_3g103420 32.800 125 73 3 12 129 6 126 7.19e-12 65.5
MsG0580027854.01.T01 MTR_3g082650 34.722 72 46 1 17 88 19 89 9.49e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027854.01.T01 AT1G22330 65.217 207 51 7 5 203 6 199 1.10e-64 205
MsG0580027854.01.T01 AT1G78260 53.992 263 73 12 5 235 6 252 1.24e-56 184
MsG0580027854.01.T01 AT1G78260 56.604 265 63 12 5 235 6 252 6.01e-56 182
MsG0580027854.01.T01 AT1G76460 48.661 224 101 6 5 217 12 232 9.27e-55 179
MsG0580027854.01.T01 AT1G20880 43.643 291 123 13 5 282 12 274 6.37e-51 169
MsG0580027854.01.T01 AT1G20880 43.643 291 123 13 5 282 12 274 6.37e-51 169
MsG0580027854.01.T01 AT1G20880 43.643 291 123 13 5 282 12 274 6.37e-51 169
MsG0580027854.01.T01 AT1G33470 51.899 158 70 4 12 167 3 156 3.83e-46 155
MsG0580027854.01.T01 AT1G33470 51.899 158 70 4 12 167 3 156 3.89e-46 155
MsG0580027854.01.T01 AT2G46780 49.223 193 85 6 12 192 18 209 3.90e-45 155
MsG0580027854.01.T01 AT2G46780 49.223 193 85 6 12 192 18 209 3.90e-45 155
MsG0580027854.01.T01 AT1G33470 52.632 152 66 4 12 161 3 150 1.34e-44 151
MsG0580027854.01.T01 AT1G22910 69.388 98 28 1 10 105 7 104 2.06e-43 148
MsG0580027854.01.T01 AT1G22910 69.388 98 28 1 10 105 7 104 5.88e-43 147
MsG0580027854.01.T01 AT1G22910 67.308 104 27 2 10 111 7 105 9.84e-43 149
MsG0580027854.01.T01 AT3G54770 66.304 92 30 1 10 100 11 102 1.30e-37 134
MsG0580027854.01.T01 AT3G54770 66.304 92 30 1 10 100 11 102 1.88e-37 134
MsG0580027854.01.T01 AT5G11412 58.889 90 37 0 5 94 41 130 1.07e-34 124
MsG0580027854.01.T01 AT5G53680 49.000 100 47 2 5 101 3 101 1.68e-29 110
MsG0580027854.01.T01 AT5G53720 54.430 79 36 0 16 94 9 87 1.21e-25 98.2
MsG0580027854.01.T01 AT3G06970 47.423 97 50 1 12 107 8 104 1.50e-25 103
MsG0580027854.01.T01 AT3G54770 66.176 68 22 1 32 98 1 68 8.14e-25 99.4
MsG0580027854.01.T01 AT5G47620 47.826 69 35 1 16 84 6 73 2.28e-18 85.1
MsG0580027854.01.T01 AT5G47620 47.826 69 35 1 16 84 6 73 2.28e-18 85.1
MsG0580027854.01.T01 AT5G47620 47.826 69 35 1 16 84 6 73 2.28e-18 85.1
MsG0580027854.01.T01 AT5G47620 47.826 69 35 1 16 84 6 73 2.49e-18 85.1
MsG0580027854.01.T01 AT2G22090 43.373 83 47 0 12 94 100 182 1.50e-17 82.0
MsG0580027854.01.T01 AT2G22090 43.373 83 47 0 12 94 100 182 1.50e-17 82.0
MsG0580027854.01.T01 AT4G26650 41.667 72 41 1 13 84 9 79 2.86e-17 81.6
MsG0580027854.01.T01 AT4G26650 41.667 72 41 1 13 84 12 82 3.06e-17 81.6
MsG0580027854.01.T01 AT3G15010 45.783 83 45 0 12 94 71 153 3.51e-17 81.3
MsG0580027854.01.T01 AT3G15010 36.364 88 56 0 8 95 159 246 1.27e-15 76.6
MsG0580027854.01.T01 AT3G15010 45.783 83 45 0 12 94 71 153 3.51e-17 81.3
MsG0580027854.01.T01 AT3G15010 36.364 88 56 0 8 95 159 246 1.27e-15 76.6
MsG0580027854.01.T01 AT4G39260 40.625 96 45 3 17 111 7 91 4.75e-17 75.1
MsG0580027854.01.T01 AT5G55550 41.096 73 42 1 12 84 2 73 5.23e-17 80.9
MsG0580027854.01.T01 AT5G55550 41.096 73 42 1 12 84 2 73 5.23e-17 80.9
MsG0580027854.01.T01 AT5G55550 41.096 73 42 1 12 84 2 73 5.23e-17 80.9
MsG0580027854.01.T01 AT5G55550 41.096 73 42 1 12 84 2 73 5.23e-17 80.9
MsG0580027854.01.T01 AT5G55550 41.096 73 42 1 12 84 2 73 5.23e-17 80.9
MsG0580027854.01.T01 AT5G55550 41.096 73 42 1 12 84 2 73 6.00e-17 80.9
MsG0580027854.01.T01 AT5G55550 41.096 73 42 1 12 84 2 73 6.00e-17 80.9
MsG0580027854.01.T01 AT5G55550 41.096 73 42 1 12 84 2 73 6.00e-17 80.9
MsG0580027854.01.T01 AT5G55550 41.096 73 42 1 12 84 2 73 6.00e-17 80.9
MsG0580027854.01.T01 AT5G55550 41.096 73 42 1 12 84 2 73 6.54e-17 80.9
MsG0580027854.01.T01 AT5G55550 41.096 73 42 1 12 84 2 73 6.68e-17 80.9
MsG0580027854.01.T01 AT4G39260 43.421 76 42 1 17 91 7 82 7.68e-17 75.5
MsG0580027854.01.T01 AT4G39260 43.421 76 42 1 17 91 7 82 2.11e-16 75.5
MsG0580027854.01.T01 AT4G13850 40.909 88 48 2 16 102 35 119 3.32e-16 74.3
MsG0580027854.01.T01 AT4G13850 40.909 88 48 2 16 102 35 119 4.09e-16 74.3
MsG0580027854.01.T01 AT2G41060 39.759 83 50 0 12 94 124 206 4.15e-16 78.6
MsG0580027854.01.T01 AT2G41060 39.759 83 50 0 12 94 124 206 4.15e-16 78.6
MsG0580027854.01.T01 AT2G41060 39.759 83 50 0 12 94 124 206 4.15e-16 78.6
MsG0580027854.01.T01 AT4G13850 40.909 88 48 2 16 102 35 119 4.58e-16 74.3
MsG0580027854.01.T01 AT3G23830 38.636 88 50 2 16 102 35 119 6.34e-16 73.2
MsG0580027854.01.T01 AT3G23830 38.636 88 50 2 16 102 35 119 6.34e-16 73.2
MsG0580027854.01.T01 AT4G39260 45.161 62 34 0 17 78 7 68 6.90e-16 72.4
MsG0580027854.01.T01 AT3G07810 40.000 75 44 1 17 91 7 80 2.86e-15 75.9
MsG0580027854.01.T01 AT3G07810 40.000 75 44 1 17 91 7 80 2.88e-15 75.9
MsG0580027854.01.T01 AT2G21660 42.683 82 45 2 11 91 4 84 5.04e-15 71.6
MsG0580027854.01.T01 AT2G21660 42.683 82 45 2 11 91 4 84 7.20e-15 71.6
MsG0580027854.01.T01 AT4G13850 41.667 72 38 1 16 87 35 102 8.93e-15 70.1
MsG0580027854.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 9.62e-15 74.3
MsG0580027854.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 9.62e-15 74.3
MsG0580027854.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 9.62e-15 74.3
MsG0580027854.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 9.62e-15 74.3
MsG0580027854.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 9.62e-15 74.3
MsG0580027854.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 9.62e-15 74.3
MsG0580027854.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 9.62e-15 74.3
MsG0580027854.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 9.62e-15 74.3
MsG0580027854.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 9.62e-15 74.3
MsG0580027854.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 9.62e-15 74.3
MsG0580027854.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 9.62e-15 74.3
MsG0580027854.01.T01 AT2G33410 35.870 92 57 2 17 108 7 96 2.17e-14 73.2
MsG0580027854.01.T01 AT2G19380 39.506 81 49 0 12 92 404 484 2.50e-14 73.6
MsG0580027854.01.T01 AT4G14300 37.500 80 49 1 12 91 2 80 4.69e-14 72.0
MsG0580027854.01.T01 AT4G14300 37.500 80 49 1 12 91 2 80 4.69e-14 72.0
MsG0580027854.01.T01 AT1G17640 41.667 72 41 1 17 88 67 137 8.44e-14 71.2
MsG0580027854.01.T01 AT1G17640 41.667 72 41 1 17 88 67 137 8.44e-14 71.2
MsG0580027854.01.T01 AT1G17640 41.667 72 41 1 17 88 67 137 8.44e-14 71.2
MsG0580027854.01.T01 AT2G22100 34.940 83 54 0 6 88 153 235 1.89e-13 70.1
MsG0580027854.01.T01 AT3G26420 40.580 69 40 1 17 84 8 76 3.89e-12 65.1
MsG0580027854.01.T01 AT1G74230 37.662 77 48 0 16 92 34 110 1.13e-11 64.3
MsG0580027854.01.T01 AT5G04280 35.294 102 60 2 16 115 7 104 1.22e-11 64.3
MsG0580027854.01.T01 AT5G61030 33.333 78 48 1 16 93 40 113 1.41e-11 64.3
MsG0580027854.01.T01 AT5G61030 33.333 78 48 1 16 93 40 113 1.41e-11 64.3
MsG0580027854.01.T01 AT1G18630 41.429 70 40 1 16 84 36 105 1.80e-11 61.6
MsG0580027854.01.T01 AT1G22910 65.217 46 14 1 62 105 8 53 2.92e-11 62.0
MsG0580027854.01.T01 AT5G59865 48.980 49 25 0 16 64 26 74 3.14e-11 59.7

Find 105 sgRNAs with CRISPR-Local

Find 408 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTATGGCATTCCAAATT+TGG 0.131556 5:+69663369 MsG0580027854.01.T01:three_prime_UTR
TTGATTAATCAGTCCAAATT+TGG 0.158048 5:-69663382 None:intergenic
CAATACTATCAACAACTTTA+TGG 0.198535 5:+69660219 MsG0580027854.01.T01:CDS
CCACATTATCGATCACAATT+TGG 0.217645 5:+69656222 MsG0580027854.01.T01:CDS
GGAGAAGGTTGCCTTATTAA+TGG 0.270286 5:-69660426 None:intergenic
ATGGGTTCACCATATTATTA+TGG 0.277771 5:+69660258 MsG0580027854.01.T01:CDS
CTTCCATCAATTACCGGGTT+TGG 0.284543 5:-69656534 None:intergenic
CCATATGGTTGGTACATTAC+TGG 0.289287 5:-69657192 None:intergenic
ACTTGAGGGTACCCGTATTC+AGG 0.296691 5:-69660033 None:intergenic
CAAGCCCTTCTAGCTGATTC+TGG 0.316155 5:-69656504 None:intergenic
CACTTCAACAACCATTAATA+AGG 0.322262 5:+69660415 MsG0580027854.01.T01:CDS
AGCTTGTATGCGATGTGGTT+GGG 0.337761 5:-69660325 None:intergenic
GCTCTTCTTCCATCAATTAC+CGG 0.348588 5:-69656540 None:intergenic
GGACTGATTAATCAACTTCA+TGG 0.352176 5:+69663390 MsG0580027854.01.T01:three_prime_UTR
GTTCCTTCCATTGGTGTAGT+AGG 0.375457 5:-69660369 None:intergenic
TACGCCGCTGCTGCTCCTCC+TGG 0.388874 5:-69657114 None:intergenic
ATTGAATTTGAAGATTATAC+AGG 0.389867 5:-69663265 None:intergenic
ATAGAATAGCCATAATAATA+TGG 0.394438 5:-69660267 None:intergenic
CCAGTAATGTACCAACCATA+TGG 0.396412 5:+69657192 MsG0580027854.01.T01:CDS
ATGACTTGTGTTCTTCACTA+TGG 0.398359 5:+69663355 MsG0580027854.01.T01:three_prime_UTR
CCCACCTACACTCCTGAATA+CGG 0.401412 5:+69660021 MsG0580027854.01.T01:CDS
GTGATCCAGAATCAGCTAGA+AGG 0.404501 5:+69656499 MsG0580027854.01.T01:CDS
GGCAGGAGGGCCACCACAAA+TGG 0.409472 5:+69657149 MsG0580027854.01.T01:CDS
TGTAGTAGGGTAGTATAGAT+AGG 0.410340 5:-69660355 None:intergenic
AATTGTAACATTGCTTCTCT+TGG 0.414331 5:+69656564 MsG0580027854.01.T01:CDS
CCTCTTGGTGGTGATGGTCT+AGG 0.428010 5:-69656591 None:intergenic
GTTGCTCCTCCTGCCATTTG+TGG 0.434650 5:-69657162 None:intergenic
AGCGGCGTACGGCGGTGTTC+CGG 0.436874 5:+69657128 MsG0580027854.01.T01:CDS
GAGAAAGTTGTTCCTTCCAT+TGG 0.439869 5:-69660378 None:intergenic
GATTATACAGGTTGAAACTA+AGG 0.440593 5:-69663253 None:intergenic
ACATAGCTAACTTACCCATA+TGG 0.452271 5:-69657207 None:intergenic
GATCCAAACCCGGTAATTGA+TGG 0.454852 5:+69656531 MsG0580027854.01.T01:CDS
TAATTACCTCTTGGTGGTGA+TGG 0.454939 5:-69656597 None:intergenic
TGGACCATCATCTTCAACAA+TGG 0.459048 5:+69660239 MsG0580027854.01.T01:CDS
ACCTCATCAGAGACAGCATC+TGG 0.463906 5:+69663158 MsG0580027854.01.T01:CDS
CTCTTCTTCCATCAATTACC+GGG 0.464479 5:-69656539 None:intergenic
TTCCTTCCATTGGTGTAGTA+GGG 0.466026 5:-69660368 None:intergenic
ATTATCACTGATAAGAATAC+AGG 0.469048 5:+69656351 MsG0580027854.01.T01:CDS
GGAGGGCCACCACAAATGGC+AGG 0.475742 5:+69657153 MsG0580027854.01.T01:CDS
GGAGGAGCAGCAGCGGCGTA+CGG 0.476509 5:+69657117 MsG0580027854.01.T01:CDS
GGACCATCATCTTCAACAAT+GGG 0.476751 5:+69660240 MsG0580027854.01.T01:CDS
GGTGTGGGGACAGGAGCACC+AGG 0.477832 5:+69657096 MsG0580027854.01.T01:CDS
AGCACCAGGAGGAGCAGCAG+CGG 0.478510 5:+69657110 MsG0580027854.01.T01:CDS
TGAAATTAATTACCTCTTGG+TGG 0.486134 5:-69656603 None:intergenic
ATTTGTGGTGGCCCTCCTGC+CGG 0.491579 5:-69657147 None:intergenic
CAGCTTGTATGCGATGTGGT+TGG 0.492117 5:-69660326 None:intergenic
TATGTCCTCATTTCATCAGT+TGG 0.492209 5:-69656294 None:intergenic
TACGGCGGTGTTCCGGCAGG+AGG 0.505951 5:+69657135 MsG0580027854.01.T01:CDS
TGGAGACACAACATTCACTA+AGG 0.512883 5:+69656242 MsG0580027854.01.T01:CDS
TATTGTGCTTGCTGAATCTG+TGG 0.514006 5:-69660201 None:intergenic
TACAGGTTGAAACTAAGGGG+GGG 0.517381 5:-69663248 None:intergenic
AAGAATACAGGAAAATCTAA+AGG 0.522577 5:+69656363 MsG0580027854.01.T01:CDS
GCTCCTCCTGCCATTTGTGG+TGG 0.523998 5:-69657159 None:intergenic
GCAGGGAGGGGTACATATCA+AGG 0.525507 5:+69657069 MsG0580027854.01.T01:intron
GCGTACGGCGGTGTTCCGGC+AGG 0.531532 5:+69657132 MsG0580027854.01.T01:CDS
AGGGGTACATATCAAGGTGG+GGG 0.532228 5:+69657075 MsG0580027854.01.T01:CDS
CAGTAATGTACCAACCATAT+GGG 0.532662 5:+69657193 MsG0580027854.01.T01:CDS
ACAGGAAAATCTAAAGGATA+CGG 0.534361 5:+69656369 MsG0580027854.01.T01:CDS
GCTTGTATGCGATGTGGTTG+GGG 0.534607 5:-69660324 None:intergenic
CAACCACATCGCATACAAGC+TGG 0.537393 5:+69660327 MsG0580027854.01.T01:CDS
CCCGTATTCAGGAGTGTAGG+TGG 0.540062 5:-69660022 None:intergenic
ATTATACAGGTTGAAACTAA+GGG 0.541207 5:-69663252 None:intergenic
CTTATTAATGGTTGTTGAAG+TGG 0.545928 5:-69660414 None:intergenic
AAAGATTACCACTAGGAGAA+GGG 0.546590 5:-69660452 None:intergenic
ATCTGGAGTGGTTATAACTT+CGG 0.549585 5:+69663175 MsG0580027854.01.T01:CDS
GAGGGGTACATATCAAGGTG+GGG 0.550871 5:+69657074 MsG0580027854.01.T01:CDS
CCAAATTGTGATCGATAATG+TGG 0.553655 5:-69656222 None:intergenic
GAAAGATTACCACTAGGAGA+AGG 0.553884 5:-69660453 None:intergenic
GGGAGGGGTACATATCAAGG+TGG 0.557161 5:+69657072 MsG0580027854.01.T01:intron
CTAGGAGAAGGGGTAGGAGA+AGG 0.561216 5:-69660441 None:intergenic
TCGGAAAGTTCAAATACTCA+AGG 0.561904 5:+69663194 MsG0580027854.01.T01:CDS
AGCTAACTTACCCATATGGT+TGG 0.570433 5:-69657203 None:intergenic
GGAGGGGTACATATCAAGGT+GGG 0.575240 5:+69657073 MsG0580027854.01.T01:CDS
ATTGTGCTTGCTGAATCTGT+GGG 0.576111 5:-69660200 None:intergenic
CCACCTACACTCCTGAATAC+GGG 0.576471 5:+69660022 MsG0580027854.01.T01:CDS
TGATCCAGAATCAGCTAGAA+GGG 0.577679 5:+69656500 MsG0580027854.01.T01:CDS
GGAGCAGCAGCGGCGTACGG+CGG 0.578552 5:+69657120 MsG0580027854.01.T01:CDS
ATACTACCCTACTACACCAA+TGG 0.581425 5:+69660362 MsG0580027854.01.T01:CDS
TATGCAAGCAGCAGCACCAA+GGG 0.588236 5:+69660287 MsG0580027854.01.T01:CDS
GTAGGGTAGTATAGATAGGA+TGG 0.589808 5:-69660351 None:intergenic
CCGTATTCAGGAGTGTAGGT+GGG 0.589906 5:-69660021 None:intergenic
TCTCCTACCCCTTCTCCTAG+TGG 0.593229 5:+69660444 MsG0580027854.01.T01:CDS
AAGATTACCACTAGGAGAAG+GGG 0.593298 5:-69660451 None:intergenic
GGTGTTGAAAATGTACCCCT+TGG 0.604699 5:-69660303 None:intergenic
AAACTCCAACTGATGAAATG+AGG 0.611186 5:+69656289 MsG0580027854.01.T01:CDS
GAACCCATTGTTGAAGATGA+TGG 0.613054 5:-69660243 None:intergenic
CGGAAAGTTCAAATACTCAA+GGG 0.613076 5:+69663195 MsG0580027854.01.T01:CDS
GGCTTGTGCTGATCCAAACC+CGG 0.613733 5:+69656521 MsG0580027854.01.T01:CDS
ATACAGGTTGAAACTAAGGG+GGG 0.621432 5:-69663249 None:intergenic
GGGCCACCACAAATGGCAGG+AGG 0.622370 5:+69657156 MsG0580027854.01.T01:CDS
CGTATTCAGGAGTGTAGGTG+GGG 0.623905 5:-69660020 None:intergenic
TACCCTACTACACCAATGGA+AGG 0.628793 5:+69660366 MsG0580027854.01.T01:CDS
ACGGCGGTGTTCCGGCAGGA+GGG 0.631360 5:+69657136 MsG0580027854.01.T01:CDS
TCCAGATGCTGTCTCTGATG+AGG 0.638137 5:-69663159 None:intergenic
TTATACAGGTTGAAACTAAG+GGG 0.641425 5:-69663251 None:intergenic
ATCAGAGACAGCATCTGGAG+TGG 0.649028 5:+69663163 MsG0580027854.01.T01:CDS
CTATGCAAGCAGCAGCACCA+AGG 0.651575 5:+69660286 MsG0580027854.01.T01:CDS
GTACCCGTATTCAGGAGTGT+AGG 0.661197 5:-69660025 None:intergenic
AGTGAAGAACACAAGTCATG+TGG 0.666369 5:-69663351 None:intergenic
GTGGGGACAGGAGCACCAGG+AGG 0.675679 5:+69657099 MsG0580027854.01.T01:CDS
CCTAGACCATCACCACCAAG+AGG 0.681390 5:+69656591 MsG0580027854.01.T01:CDS
TTACCACTAGGAGAAGGGGT+AGG 0.689545 5:-69660447 None:intergenic
TATACAGGTTGAAACTAAGG+GGG 0.689755 5:-69663250 None:intergenic
GGTCCAGCTTGTATGCGATG+TGG 0.710376 5:-69660330 None:intergenic
ATGCAAGCAGCAGCACCAAG+GGG 0.733849 5:+69660288 MsG0580027854.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTAAAAATAGAAAG+GGG + Chr5:69657882-69657901 MsG0580027854.01.T01:intron 10.0%
!! AACAATAGTATTAAAATAAA+TGG - Chr5:69663053-69663072 None:intergenic 10.0%
!! AGAAAATATTAAAAATAGAA+AGG + Chr5:69657880-69657899 MsG0580027854.01.T01:intron 10.0%
!! ATTAAATTAATATAAAGAAG+AGG - Chr5:69660482-69660501 None:intergenic 10.0%
!! GAAAATATTAAAAATAGAAA+GGG + Chr5:69657881-69657900 MsG0580027854.01.T01:intron 10.0%
!! TCTAAATTAATAAATTTCTT+TGG - Chr5:69658757-69658776 None:intergenic 10.0%
!!! AATAATCGTTTTATATATAA+GGG - Chr5:69658257-69658276 None:intergenic 10.0%
!!! ACATATTTTTTTTTTTTGAA+AGG - Chr5:69661894-69661913 None:intergenic 10.0%
!!! ATATTTTTATGTAAATAGAT+CGG + Chr5:69656878-69656897 MsG0580027854.01.T01:intron 10.0%
!!! ATTATATCTTCAATTTTTTT+CGG + Chr5:69663327-69663346 MsG0580027854.01.T01:three_prime_UTR 10.0%
!!! TAATAAGATAATAATTTTTC+GGG - Chr5:69659076-69659095 None:intergenic 10.0%
!!! TAATAATCGTTTTATATATA+AGG - Chr5:69658258-69658277 None:intergenic 10.0%
!!! TATTAATTTATGATTTTCTT+GGG + Chr5:69659028-69659047 MsG0580027854.01.T01:intron 10.0%
!!! TCATATATTTTTTTAGTATT+AGG + Chr5:69660132-69660151 MsG0580027854.01.T01:intron 10.0%
!!! TTATTAATTTATGATTTTCT+TGG + Chr5:69659027-69659046 MsG0580027854.01.T01:intron 10.0%
!!! TTTAAAATAATAAATTTGTC+CGG - Chr5:69659142-69659161 None:intergenic 10.0%
!!! TTTAATATTATTTTCTAAAC+AGG + Chr5:69663006-69663025 MsG0580027854.01.T01:intron 10.0%
!!! TTTAATTTAATATTCAACTT+TGG + Chr5:69660686-69660705 MsG0580027854.01.T01:intron 10.0%
!! AAACATATAAATGTTACAAA+TGG - Chr5:69661864-69661883 None:intergenic 15.0%
!! AAACTCTTTAAATTAATACT+CGG - Chr5:69659180-69659199 None:intergenic 15.0%
!! AAATATTAAAAATAGAAAGG+GGG + Chr5:69657883-69657902 MsG0580027854.01.T01:intron 15.0%
!! AATTGAATGAATCAATAAAA+TGG - Chr5:69661705-69661724 None:intergenic 15.0%
!! AGTAAATTTGAAAAGATTAA+AGG - Chr5:69660513-69660532 None:intergenic 15.0%
!! ATACAAATTCATTGTATAAA+AGG - Chr5:69662136-69662155 None:intergenic 15.0%
!! ATTAAATTACAAAGCAAAAA+AGG - Chr5:69659976-69659995 None:intergenic 15.0%
!! GTAAATTTGAAAAGATTAAA+GGG - Chr5:69660512-69660531 None:intergenic 15.0%
!! TTCATAAATAAAAACATTAG+TGG - Chr5:69656643-69656662 None:intergenic 15.0%
!! TTTCATATTATAAGTTAGTT+CGG + Chr5:69659321-69659340 MsG0580027854.01.T01:intron 15.0%
!!! AAAAAATGATGATGATAAAT+AGG + Chr5:69657994-69658013 MsG0580027854.01.T01:intron 15.0%
!!! AAAAAATGTATTGATTATGT+TGG - Chr5:69659362-69659381 None:intergenic 15.0%
!!! AAATATTTTTTATGCAAAAG+AGG - Chr5:69658470-69658489 None:intergenic 15.0%
!!! AAGTTATACATGAATTTTAT+AGG + Chr5:69657849-69657868 MsG0580027854.01.T01:intron 15.0%
!!! AATATTAAATAGGTTGAAAT+TGG - Chr5:69662881-69662900 None:intergenic 15.0%
!!! AATATTTTTTATGCAAAAGA+GGG - Chr5:69658469-69658488 None:intergenic 15.0%
!!! AGTTTTTCAATTTTTTACAT+TGG + Chr5:69659104-69659123 MsG0580027854.01.T01:intron 15.0%
!!! GATTAATATATTTAGAGTAA+GGG - Chr5:69657512-69657531 None:intergenic 15.0%
!!! TAATTATTGTTTCTTATGAT+TGG + Chr5:69663106-69663125 MsG0580027854.01.T01:intron 15.0%
!!! TGAAATGATAAAGTATATTT+TGG + Chr5:69657027-69657046 MsG0580027854.01.T01:intron 15.0%
!!! TGATTAATATATTTAGAGTA+AGG - Chr5:69657513-69657532 None:intergenic 15.0%
!!! TTTCATTAATTTTTAGAGTA+AGG - Chr5:69657550-69657569 None:intergenic 15.0%
!!! TTTTTTTTTTTACGTAAACA+TGG - Chr5:69662628-69662647 None:intergenic 15.0%
!! AAATATCAAAAACTAGAGAA+AGG + Chr5:69657943-69657962 MsG0580027854.01.T01:intron 20.0%
!! AATATTAAAAATAGAAAGGG+GGG + Chr5:69657884-69657903 MsG0580027854.01.T01:intron 20.0%
!! AATCTTATTCGATATAATGT+CGG - Chr5:69658428-69658447 None:intergenic 20.0%
!! AATGTAACGTGTAAATAATT+TGG - Chr5:69658700-69658719 None:intergenic 20.0%
!! AATTTGTAATTTATGAGTAC+AGG + Chr5:69660164-69660183 MsG0580027854.01.T01:intron 20.0%
!! ATAAAGTGCATTAAAAAGAA+TGG - Chr5:69659571-69659590 None:intergenic 20.0%
!! ATAATAATGTGTGTATTTCT+TGG + Chr5:69657668-69657687 MsG0580027854.01.T01:intron 20.0%
!! ATAGAATAGCCATAATAATA+TGG - Chr5:69660270-69660289 None:intergenic 20.0%
!! ATAGTAGTTAAGAAAAGAAA+AGG - Chr5:69662345-69662364 None:intergenic 20.0%
!! ATATCACCATAAAAATTAAG+TGG + Chr5:69656838-69656857 MsG0580027854.01.T01:intron 20.0%
!! ATGTATGTAGTCTTTATTAT+AGG + Chr5:69661729-69661748 MsG0580027854.01.T01:intron 20.0%
!! ATTGAATTTGAAGATTATAC+AGG - Chr5:69663268-69663287 None:intergenic 20.0%
!! ATTTCACATTGATCAATTTA+AGG + Chr5:69659772-69659791 MsG0580027854.01.T01:intron 20.0%
!! CAATACATATAAAAATAGCT+TGG + Chr5:69659399-69659418 MsG0580027854.01.T01:intron 20.0%
!! CTCTATAAATTAATAATGTC+AGG + Chr5:69658730-69658749 MsG0580027854.01.T01:intron 20.0%
!! GTATGATCTTAAATGATTAT+GGG - Chr5:69660071-69660090 None:intergenic 20.0%
!! TAAATAATAGAGGTCAAATA+TGG - Chr5:69662947-69662966 None:intergenic 20.0%
!! TAGTAATGTGACTTTAATAA+TGG - Chr5:69657791-69657810 None:intergenic 20.0%
!! TCAAATAAACCAATTTAAAC+AGG + Chr5:69662848-69662867 MsG0580027854.01.T01:intron 20.0%
!! TCATAATCAATTCAATCTTA+GGG + Chr5:69659678-69659697 MsG0580027854.01.T01:intron 20.0%
!! TGTATGATCTTAAATGATTA+TGG - Chr5:69660072-69660091 None:intergenic 20.0%
!!! AACTACAAATTTTGATGTTT+TGG + Chr5:69662475-69662494 MsG0580027854.01.T01:intron 20.0%
!!! AATCAATACATTTTTTTCTG+AGG + Chr5:69659366-69659385 MsG0580027854.01.T01:intron 20.0%
!!! AATGATAAAGTATATTTTGG+TGG + Chr5:69657030-69657049 MsG0580027854.01.T01:intron 20.0%
!!! AATTTCTTATCAATAGCTTT+TGG - Chr5:69659812-69659831 None:intergenic 20.0%
!!! ACTACAAATTTTGATGTTTT+GGG + Chr5:69662476-69662495 MsG0580027854.01.T01:intron 20.0%
!!! AGAGATGAATTTCATTTTTT+TGG - Chr5:69656962-69656981 None:intergenic 20.0%
!!! AGCATTTTCAATTTTGTTAT+TGG + Chr5:69662105-69662124 MsG0580027854.01.T01:intron 20.0%
!!! ATCAATACATTTTTTTCTGA+GGG + Chr5:69659367-69659386 MsG0580027854.01.T01:intron 20.0%
!!! TATGAGATAATTTTTCACAT+GGG + Chr5:69661594-69661613 MsG0580027854.01.T01:intron 20.0%
!!! TTATGAGATAATTTTTCACA+TGG + Chr5:69661593-69661612 MsG0580027854.01.T01:intron 20.0%
!!! TTGTTTATCTTTGAGTTTAA+AGG - Chr5:69662595-69662614 None:intergenic 20.0%
!!! TTTATTTGTGAAGAAGATTT+TGG + Chr5:69662250-69662269 MsG0580027854.01.T01:intron 20.0%
! AAAAAATGTTCTTAAGACAC+TGG - Chr5:69661957-69661976 None:intergenic 25.0%
! AAAATGAGAAAATGCAAAGT+GGG - Chr5:69661451-69661470 None:intergenic 25.0%
! AAATATGTCAAACAAAGAAG+AGG - Chr5:69663085-69663104 None:intergenic 25.0%
! AAATTTCACAGTTGTTCTTA+AGG + Chr5:69658514-69658533 MsG0580027854.01.T01:intron 25.0%
! AAGAATACAGGAAAATCTAA+AGG + Chr5:69656363-69656382 MsG0580027854.01.T01:CDS 25.0%
! AATTTCACAGTTGTTCTTAA+GGG + Chr5:69658515-69658534 MsG0580027854.01.T01:intron 25.0%
! AATTTGAAAAGATTAAAGGG+TGG - Chr5:69660509-69660528 None:intergenic 25.0%
! ACAACTTATAGACATATCAT+CGG + Chr5:69662775-69662794 MsG0580027854.01.T01:intron 25.0%
! ACATTATTAACTTTCTTGCA+TGG - Chr5:69659437-69659456 None:intergenic 25.0%
! ACTTATAACTAAAAAACCGA+CGG + Chr5:69660927-69660946 MsG0580027854.01.T01:intron 25.0%
! AGTACATGAAATGAATTTGT+AGG - Chr5:69661487-69661506 None:intergenic 25.0%
! AGTTACCATTTACATAACAT+GGG - Chr5:69657264-69657283 None:intergenic 25.0%
! ATCTTCATCACAAATTAGAA+AGG - Chr5:69660844-69660863 None:intergenic 25.0%
! ATGAAATGAATTTGTAGGTT+GGG - Chr5:69661482-69661501 None:intergenic 25.0%
! ATGATATGAAATGATATGTG+AGG - Chr5:69657421-69657440 None:intergenic 25.0%
! ATTATCACTGATAAGAATAC+AGG + Chr5:69656351-69656370 MsG0580027854.01.T01:CDS 25.0%
! ATTTACCCATGTTATGTAAA+TGG + Chr5:69657256-69657275 MsG0580027854.01.T01:intron 25.0%
! ATTTATATAAGCTCTCAATC+AGG + Chr5:69662800-69662819 MsG0580027854.01.T01:intron 25.0%
! CAATACTATCAACAACTTTA+TGG + Chr5:69660219-69660238 MsG0580027854.01.T01:CDS 25.0%
! CAATGAAATTAATTACCTCT+TGG - Chr5:69656609-69656628 None:intergenic 25.0%
! CAGTTATCTAATTAATACCA+TGG - Chr5:69657312-69657331 None:intergenic 25.0%
! CATGATGATTTAAAAGAGTA+AGG - Chr5:69657483-69657502 None:intergenic 25.0%
! CCATAGAAACTTATTATTCA+AGG + Chr5:69662052-69662071 MsG0580027854.01.T01:intron 25.0%
! CCTTAGAATGACATAATATT+GGG + Chr5:69658538-69658557 MsG0580027854.01.T01:intron 25.0%
! CCTTGAATAATAAGTTTCTA+TGG - Chr5:69662055-69662074 None:intergenic 25.0%
! CTTAGAATGACATAATATTG+GGG + Chr5:69658539-69658558 MsG0580027854.01.T01:intron 25.0%
! GAAATGACCAAAAAATTCTA+CGG - Chr5:69660963-69660982 None:intergenic 25.0%
! GACATTATATCGAATAAGAT+TGG + Chr5:69658427-69658446 MsG0580027854.01.T01:intron 25.0%
! GTCATAATCAATTCAATCTT+AGG + Chr5:69659677-69659696 MsG0580027854.01.T01:intron 25.0%
! TAAAATGAGAAAATGCAAAG+TGG - Chr5:69661452-69661471 None:intergenic 25.0%
! TAAACATTGAATTAATGTGC+AGG + Chr5:69656467-69656486 MsG0580027854.01.T01:intron 25.0%
! TAACCGTATTATGTATGTAT+GGG + Chr5:69661304-69661323 MsG0580027854.01.T01:intron 25.0%
! TAACTACTATTATCATGTGA+AGG + Chr5:69662355-69662374 MsG0580027854.01.T01:intron 25.0%
! TATGACATAAGTTCAATTTC+AGG - Chr5:69661652-69661671 None:intergenic 25.0%
! TCAAATAGATCGATTATTGT+AGG - Chr5:69656702-69656721 None:intergenic 25.0%
! TCAAATTAACCTACCTATAT+AGG - Chr5:69658094-69658113 None:intergenic 25.0%
! TCAATAAAAAATGTAGTCCA+CGG + Chr5:69658051-69658070 MsG0580027854.01.T01:intron 25.0%
! TTAACCGTATTATGTATGTA+TGG + Chr5:69661303-69661322 MsG0580027854.01.T01:intron 25.0%
! TTAGAATGACATAATATTGG+GGG + Chr5:69658540-69658559 MsG0580027854.01.T01:intron 25.0%
! TTGATTAATCAGTCCAAATT+TGG - Chr5:69663385-69663404 None:intergenic 25.0%
!! AGTGTCAATTCAACATTTTA+TGG - Chr5:69660536-69660555 None:intergenic 25.0%
!! ATTATACAGGTTGAAACTAA+GGG - Chr5:69663255-69663274 None:intergenic 25.0%
!! TTTAGAGTAAGGTTACATAA+GGG - Chr5:69657539-69657558 None:intergenic 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG + Chr5:69661790-69661809 MsG0580027854.01.T01:intron 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG - Chr5:69661809-69661790 None:intergenic 25.0%
!!! AATTTTGTCGAATTTGAGTT+TGG + Chr5:69657710-69657729 MsG0580027854.01.T01:intron 25.0%
!!! AGGACATATTTTGAACAATT+TGG + Chr5:69656309-69656328 MsG0580027854.01.T01:CDS 25.0%
!!! ATGATGATGTGTTTGTTTTA+GGG + Chr5:69657640-69657659 MsG0580027854.01.T01:intron 25.0%
!!! ATTTTCTCTTTGACTTCATT+AGG + Chr5:69661559-69661578 MsG0580027854.01.T01:intron 25.0%
!!! CAATTTCTTGTTTTGTAGTA+TGG - Chr5:69659723-69659742 None:intergenic 25.0%
!!! CTACAAATTTTGATGTTTTG+GGG + Chr5:69662477-69662496 MsG0580027854.01.T01:intron 25.0%
!!! CTTTAAAGTTTAAGTCTCTT+TGG - Chr5:69658935-69658954 None:intergenic 25.0%
!!! GTTTTTTAGTTATAAGTCAG+TGG - Chr5:69660924-69660943 None:intergenic 25.0%
!!! TATAGTGAAGTTAATTTGTG+AGG - Chr5:69659864-69659883 None:intergenic 25.0%
!!! TATGATTTTGCTATAACATG+TGG + Chr5:69661220-69661239 MsG0580027854.01.T01:intron 25.0%
!!! TTAACTACCGTAGAATTTTT+TGG + Chr5:69660953-69660972 MsG0580027854.01.T01:intron 25.0%
!!! TTTTAGAGTAAGGTTACATA+AGG - Chr5:69657540-69657559 None:intergenic 25.0%
!!! TTTTCTCTTTGACTTCATTA+GGG + Chr5:69661560-69661579 MsG0580027854.01.T01:intron 25.0%
AAAAACTAGAGAAAGGTCTA+AGG + Chr5:69657950-69657969 MsG0580027854.01.T01:intron 30.0%
AAATGCTAATAAGTTGTCCT+AGG - Chr5:69662092-69662111 None:intergenic 30.0%
AAGATGTTCATGATAACACA+TGG - Chr5:69660985-69661004 None:intergenic 30.0%
AAGTTAGTTCGGTAAGAATA+AGG + Chr5:69659332-69659351 MsG0580027854.01.T01:intron 30.0%
AATAGTAGATATGTAGTCCA+TGG + Chr5:69658023-69658042 MsG0580027854.01.T01:intron 30.0%
AATGCTAATAAGTTGTCCTA+GGG - Chr5:69662091-69662110 None:intergenic 30.0%
AATTGTAACATTGCTTCTCT+TGG + Chr5:69656564-69656583 MsG0580027854.01.T01:CDS 30.0%
ACAGGAAAATCTAAAGGATA+CGG + Chr5:69656369-69656388 MsG0580027854.01.T01:CDS 30.0%
ACTGTACATACCAAACAAAA+AGG + Chr5:69658837-69658856 MsG0580027854.01.T01:intron 30.0%
AGAACTAGATTAACCTCTAA+TGG + Chr5:69662171-69662190 MsG0580027854.01.T01:intron 30.0%
AGAGAAGCAACAACTTAAAA+TGG - Chr5:69659914-69659933 None:intergenic 30.0%
AGTCACATTACTATCTAATG+TGG + Chr5:69657798-69657817 MsG0580027854.01.T01:intron 30.0%
ATAATGTCGGATACTAAATG+TGG - Chr5:69658415-69658434 None:intergenic 30.0%
ATAGATCGATTATTGTAGGA+CGG - Chr5:69656698-69656717 None:intergenic 30.0%
ATGAATAGAGAGAATTAGAG+TGG + Chr5:69661122-69661141 MsG0580027854.01.T01:intron 30.0%
ATGCCTTAGTTACATGAAAA+AGG + Chr5:69659636-69659655 MsG0580027854.01.T01:intron 30.0%
ATGGGTTCACCATATTATTA+TGG + Chr5:69660258-69660277 MsG0580027854.01.T01:CDS 30.0%
ATGTATATGAAGTCTCTCAT+GGG - Chr5:69659500-69659519 None:intergenic 30.0%
CACTTCAACAACCATTAATA+AGG + Chr5:69660415-69660434 MsG0580027854.01.T01:CDS 30.0%
CATGAAATGAATTTGTAGGT+TGG - Chr5:69661483-69661502 None:intergenic 30.0%
CCCAATATTATGTCATTCTA+AGG - Chr5:69658541-69658560 None:intergenic 30.0%
CTTATTAATGGTTGTTGAAG+TGG - Chr5:69660417-69660436 None:intergenic 30.0%
CTTGTCTCATGTTTGAATTA+TGG + Chr5:69660640-69660659 MsG0580027854.01.T01:intron 30.0%
GAGATGACATTATAATGGTA+TGG - Chr5:69659546-69659565 None:intergenic 30.0%
GAGTTACCATTTACATAACA+TGG - Chr5:69657265-69657284 None:intergenic 30.0%
GATCTTAAATGATTATGGGA+GGG - Chr5:69660067-69660086 None:intergenic 30.0%
GCAACTTCTTATAGTACATA+TGG - Chr5:69657611-69657630 None:intergenic 30.0%
GCCTTAGAATGACATAATAT+TGG + Chr5:69658537-69658556 MsG0580027854.01.T01:intron 30.0%
GCTATGTGAATTTATTACTG+TGG + Chr5:69657223-69657242 MsG0580027854.01.T01:intron 30.0%
GTCAAATGTTAGATATACCA+AGG - Chr5:69660568-69660587 None:intergenic 30.0%
GTCACATTACTATCTAATGT+GGG + Chr5:69657799-69657818 MsG0580027854.01.T01:intron 30.0%
GTTGAATGCAGTAATGTATT+TGG - Chr5:69659943-69659962 None:intergenic 30.0%
TAAGACAACAATAACATTGC+TGG - Chr5:69658197-69658216 None:intergenic 30.0%
TAGGCTAAACTTTCATAATG+TGG + Chr5:69658355-69658374 MsG0580027854.01.T01:intron 30.0%
TAGTGTATAACGTACAATGT+AGG + Chr5:69661080-69661099 MsG0580027854.01.T01:intron 30.0%
TATGTATATGAAGTCTCTCA+TGG - Chr5:69659501-69659520 None:intergenic 30.0%
TGAAATTAATTACCTCTTGG+TGG - Chr5:69656606-69656625 None:intergenic 30.0%
TGAATAGAGAGAATTAGAGT+GGG + Chr5:69661123-69661142 MsG0580027854.01.T01:intron 30.0%
TGACCCATACATACATAATA+CGG - Chr5:69661310-69661329 None:intergenic 30.0%
TGAGAACTGTATAAATTGCA+TGG + Chr5:69658217-69658236 MsG0580027854.01.T01:intron 30.0%
TGATCTTAAATGATTATGGG+AGG - Chr5:69660068-69660087 None:intergenic 30.0%
TGCAATTTGGATGTCTTAAT+TGG - Chr5:69662514-69662533 None:intergenic 30.0%
TTAGAGTAAGGTTACATAAG+GGG - Chr5:69657538-69657557 None:intergenic 30.0%
TTGACACTAATATTCAACCT+TGG + Chr5:69660548-69660567 MsG0580027854.01.T01:intron 30.0%
TTGGGACCGAAAATTATAAA+GGG + Chr5:69659046-69659065 MsG0580027854.01.T01:intron 30.0%
TTTCATAATGTGGTGAATCT+AGG + Chr5:69658365-69658384 MsG0580027854.01.T01:intron 30.0%
! AATTAAGTGGTCATCGTTTT+AGG + Chr5:69656851-69656870 MsG0580027854.01.T01:intron 30.0%
! ACAAATGGTGTTAAGAGATT+CGG - Chr5:69661849-69661868 None:intergenic 30.0%
! ACATTCACTAAGGTTTTTGT+TGG + Chr5:69656252-69656271 MsG0580027854.01.T01:CDS 30.0%
! ATGCTTCTAATTTTTCTCAC+CGG + Chr5:69659833-69659852 MsG0580027854.01.T01:intron 30.0%
! CGATGACCACTTAATTTTTA+TGG - Chr5:69656847-69656866 None:intergenic 30.0%
! CTTTAAAGATCCAGTCAAAA+TGG + Chr5:69661404-69661423 MsG0580027854.01.T01:intron 30.0%
! GATTATACAGGTTGAAACTA+AGG - Chr5:69663256-69663275 None:intergenic 30.0%
! GGAGATCCCTTTATAATTTT+CGG - Chr5:69659055-69659074 None:intergenic 30.0%
! TGCTAAGTCTATGTGTTATT+AGG - Chr5:69660890-69660909 None:intergenic 30.0%
! TTATACAGGTTGAAACTAAG+GGG - Chr5:69663254-69663273 None:intergenic 30.0%
!! ATACAAAAGTACCAAGAGAT+GGG - Chr5:69658147-69658166 None:intergenic 30.0%
!! CATGATGATGTGTTTGTTTT+AGG + Chr5:69657639-69657658 MsG0580027854.01.T01:intron 30.0%
!! CTCTAATTTGCCTTTTTGTT+TGG - Chr5:69658850-69658869 None:intergenic 30.0%
!! GATTCATAAGCTTGTTTTCA+GGG - Chr5:69657746-69657765 None:intergenic 30.0%
!! TGATTCATAAGCTTGTTTTC+AGG - Chr5:69657747-69657766 None:intergenic 30.0%
!!! ATTTTTTATTGACCATGCCA+TGG - Chr5:69658043-69658062 None:intergenic 30.0%
AAACTCCAACTGATGAAATG+AGG + Chr5:69656289-69656308 MsG0580027854.01.T01:CDS 35.0%
AAAGATTACCACTAGGAGAA+GGG - Chr5:69660455-69660474 None:intergenic 35.0%
AAAGTAACAGTGAATGCATG+TGG + Chr5:69661357-69661376 MsG0580027854.01.T01:intron 35.0%
AAATACAACACCTGAGCTAT+TGG + Chr5:69658881-69658900 MsG0580027854.01.T01:intron 35.0%
AAGTAAGCGTCATTTGTGAT+TGG + Chr5:69661015-69661034 MsG0580027854.01.T01:intron 35.0%
ACAATGAGACCTACTGTAAT+TGG - Chr5:69657386-69657405 None:intergenic 35.0%
ACATAGCTAACTTACCCATA+TGG - Chr5:69657210-69657229 None:intergenic 35.0%
AGAGTTGAGTCTAGCATATT+AGG + Chr5:69658336-69658355 MsG0580027854.01.T01:intron 35.0%
AGATCATATCGACAAGTTCA+TGG - Chr5:69662537-69662556 None:intergenic 35.0%
AGGATAGAAAGATTACCACT+AGG - Chr5:69660462-69660481 None:intergenic 35.0%
AGGTGAGTCAAAAAGGAAAT+AGG + Chr5:69662375-69662394 MsG0580027854.01.T01:intron 35.0%
ATGGTAGAGTTCTATTGTTG+TGG - Chr5:69659895-69659914 None:intergenic 35.0%
ATTATGACTCACTTCAGTGA+TGG - Chr5:69659665-69659684 None:intergenic 35.0%
CAGTAATGTACCAACCATAT+GGG + Chr5:69657193-69657212 MsG0580027854.01.T01:CDS 35.0%
CCAAATTGTGATCGATAATG+TGG - Chr5:69656225-69656244 None:intergenic 35.0%
CCACATTATCGATCACAATT+TGG + Chr5:69656222-69656241 MsG0580027854.01.T01:CDS 35.0%
CCTTAGTTACATGAAAAAGG+AGG + Chr5:69659639-69659658 MsG0580027854.01.T01:intron 35.0%
CGGAAAGTTCAAATACTCAA+GGG + Chr5:69663195-69663214 MsG0580027854.01.T01:CDS 35.0%
CTTGGGACCGAAAATTATAA+AGG + Chr5:69659045-69659064 MsG0580027854.01.T01:intron 35.0%
GAATAGAGAGAATTAGAGTG+GGG + Chr5:69661124-69661143 MsG0580027854.01.T01:intron 35.0%
GAATTTGTATTCACAGAAGG+AGG - Chr5:69662202-69662221 None:intergenic 35.0%
GATTGTAATGTAATGCTGCA+GGG + Chr5:69657052-69657071 MsG0580027854.01.T01:intron 35.0%
GCAGAATTTGTATTCACAGA+AGG - Chr5:69662205-69662224 None:intergenic 35.0%
GGACTGATTAATCAACTTCA+TGG + Chr5:69663390-69663409 MsG0580027854.01.T01:three_prime_UTR 35.0%
GGACTTTCACCTGTTTAAAT+TGG - Chr5:69662860-69662879 None:intergenic 35.0%
GTAACTCATAGTCAGTCAAA+GGG + Chr5:69657278-69657297 MsG0580027854.01.T01:intron 35.0%
TAAACCCATCAAGCAGAAAA+TGG - Chr5:69659599-69659618 None:intergenic 35.0%
TAACTCATAGTCAGTCAAAG+GGG + Chr5:69657279-69657298 MsG0580027854.01.T01:intron 35.0%
TAGAGTAAGGTTACATAAGG+GGG - Chr5:69657537-69657556 None:intergenic 35.0%
TAGATCGATTATTGTAGGAC+GGG - Chr5:69656697-69656716 None:intergenic 35.0%
TAGCTGCAAACAAAGATGAA+AGG - Chr5:69660000-69660019 None:intergenic 35.0%
TATGTCCTCATTTCATCAGT+TGG - Chr5:69656297-69656316 None:intergenic 35.0%
TCACTATGGCATTCCAAATT+TGG + Chr5:69663369-69663388 MsG0580027854.01.T01:three_prime_UTR 35.0%
TCCAATAATGTTAGTCCTGA+GGG + Chr5:69659214-69659233 MsG0580027854.01.T01:intron 35.0%
TCGGAAAGTTCAAATACTCA+AGG + Chr5:69663194-69663213 MsG0580027854.01.T01:CDS 35.0%
TGGATATGATCATCTATGCA+TGG - Chr5:69657591-69657610 None:intergenic 35.0%
TGGTCGAGATGACATTATAA+TGG - Chr5:69659551-69659570 None:intergenic 35.0%
TGTAGTAGGGTAGTATAGAT+AGG - Chr5:69660358-69660377 None:intergenic 35.0%
! ATCTGGAGTGGTTATAACTT+CGG + Chr5:69663175-69663194 MsG0580027854.01.T01:CDS 35.0%
! ATGACTTGTGTTCTTCACTA+TGG + Chr5:69663355-69663374 MsG0580027854.01.T01:three_prime_UTR 35.0%
! TAAGAGAGTGTGAGATGATA+TGG - Chr5:69662449-69662468 None:intergenic 35.0%
! TATACAGGTTGAAACTAAGG+GGG - Chr5:69663253-69663272 None:intergenic 35.0%
! TTCACTAAGGTTTTTGTTGG+AGG + Chr5:69656255-69656274 MsG0580027854.01.T01:CDS 35.0%
!! AAAGCAAAGACCATTTTGAC+TGG - Chr5:69661417-69661436 None:intergenic 35.0%
!! CATACAAAAGTACCAAGAGA+TGG - Chr5:69658148-69658167 None:intergenic 35.0%
!! CCTCCTTTTTCATGTAACTA+AGG - Chr5:69659642-69659661 None:intergenic 35.0%
!! GTTAATTTGTGAGGTGTTTC+CGG - Chr5:69659855-69659874 None:intergenic 35.0%
!! GTTGTTGATAGTATTGTGCT+TGG - Chr5:69660215-69660234 None:intergenic 35.0%
!! TACAAAAGTACCAAGAGATG+GGG - Chr5:69658146-69658165 None:intergenic 35.0%
!! TTCTAAAACAATACACCCTC+CGG - Chr5:69661812-69661831 None:intergenic 35.0%
!!! TTTTTTACATTGGCCCAAGT+CGG + Chr5:69659114-69659133 MsG0580027854.01.T01:intron 35.0%
AACTTATGTCATACACCCTC+CGG + Chr5:69661659-69661678 MsG0580027854.01.T01:intron 40.0%
AAGATTACCACTAGGAGAAG+GGG - Chr5:69660454-69660473 None:intergenic 40.0%
AGAGTAAGGTTACATAAGGG+GGG - Chr5:69657536-69657555 None:intergenic 40.0%
AGAGTGGGGTAAAAAGAAAG+AGG + Chr5:69661138-69661157 MsG0580027854.01.T01:intron 40.0%
AGCTAACTTACCCATATGGT+TGG - Chr5:69657206-69657225 None:intergenic 40.0%
AGTGAAGAACACAAGTCATG+TGG - Chr5:69663354-69663373 None:intergenic 40.0%
AGTGGGGTAAAAAGAAAGAG+GGG + Chr5:69661140-69661159 MsG0580027854.01.T01:intron 40.0%
ATACTACCCTACTACACCAA+TGG + Chr5:69660362-69660381 MsG0580027854.01.T01:CDS 40.0%
ATGAGACCTACTGTAATTGG+AGG - Chr5:69657383-69657402 None:intergenic 40.0%
CACATGTAGTGGTCCTATAT+AGG + Chr5:69658078-69658097 MsG0580027854.01.T01:intron 40.0%
CATGTGAAGGTGAGTCAAAA+AGG + Chr5:69662368-69662387 MsG0580027854.01.T01:intron 40.0%
CCAATAATGTTAGTCCTGAG+GGG + Chr5:69659215-69659234 MsG0580027854.01.T01:intron 40.0%
CCAGTAATGTACCAACCATA+TGG + Chr5:69657192-69657211 MsG0580027854.01.T01:CDS 40.0%
CTCTTCTTCCATCAATTACC+GGG - Chr5:69656542-69656561 None:intergenic 40.0%
CTGGTGAGAAAATGACTTGA+TGG - Chr5:69658178-69658197 None:intergenic 40.0%
CTTATTGCATCCAATAGCTC+AGG - Chr5:69658894-69658913 None:intergenic 40.0%
GAAAGATTACCACTAGGAGA+AGG - Chr5:69660456-69660475 None:intergenic 40.0%
GAACCCATTGTTGAAGATGA+TGG - Chr5:69660246-69660265 None:intergenic 40.0%
GACAAGTTCATGGTGCAATT+TGG - Chr5:69662527-69662546 None:intergenic 40.0%
GAGAAAGTTGTTCCTTCCAT+TGG - Chr5:69660381-69660400 None:intergenic 40.0%
GAGTAAGGCAGAACAAAGTT+TGG - Chr5:69657468-69657487 None:intergenic 40.0%
GAGTGGGGTAAAAAGAAAGA+GGG + Chr5:69661139-69661158 MsG0580027854.01.T01:intron 40.0%
GCTCTTCTTCCATCAATTAC+CGG - Chr5:69656543-69656562 None:intergenic 40.0%
GGACCATCATCTTCAACAAT+GGG + Chr5:69660240-69660259 MsG0580027854.01.T01:CDS 40.0%
GGATTGTAATGTAATGCTGC+AGG + Chr5:69657051-69657070 MsG0580027854.01.T01:intron 40.0%
GGTAACTCATAGTCAGTCAA+AGG + Chr5:69657277-69657296 MsG0580027854.01.T01:intron 40.0%
GGTGAATCTAGGTTCAATCT+CGG + Chr5:69658376-69658395 MsG0580027854.01.T01:intron 40.0%
GTAGGGTAGTATAGATAGGA+TGG - Chr5:69660354-69660373 None:intergenic 40.0%
GTCCAATAATGTTAGTCCTG+AGG + Chr5:69659213-69659232 MsG0580027854.01.T01:intron 40.0%
TAGATATGTAGTCCATGGCA+TGG + Chr5:69658028-69658047 MsG0580027854.01.T01:intron 40.0%
TGAGACCTACTGTAATTGGA+GGG - Chr5:69657382-69657401 None:intergenic 40.0%
TGATAAAATCCCCCATCTCT+TGG + Chr5:69658133-69658152 MsG0580027854.01.T01:intron 40.0%
TGATCCAGAATCAGCTAGAA+GGG + Chr5:69656500-69656519 MsG0580027854.01.T01:CDS 40.0%
TGCTATAACATGTGGACACA+GGG + Chr5:69661228-69661247 MsG0580027854.01.T01:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG + Chr5:69661794-69661813 MsG0580027854.01.T01:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG - Chr5:69661813-69661794 None:intergenic 40.0%
TGGACCATCATCTTCAACAA+TGG + Chr5:69660239-69660258 MsG0580027854.01.T01:CDS 40.0%
TGGAGACACAACATTCACTA+AGG + Chr5:69656242-69656261 MsG0580027854.01.T01:CDS 40.0%
TGTAGTGGTCCTATATAGGT+AGG + Chr5:69658082-69658101 MsG0580027854.01.T01:intron 40.0%
TTCCTTCCATTGGTGTAGTA+GGG - Chr5:69660371-69660390 None:intergenic 40.0%
TTGCTATAACATGTGGACAC+AGG + Chr5:69661227-69661246 MsG0580027854.01.T01:intron 40.0%
TTGCTTATATTAGTGACCGG+AGG + Chr5:69661793-69661812 MsG0580027854.01.T01:intron 40.0%
TTGCTTATATTAGTGACCGG+AGG - Chr5:69661812-69661793 None:intergenic 40.0%
! ATACAGGTTGAAACTAAGGG+GGG - Chr5:69663252-69663271 None:intergenic 40.0%
! CCATATGGTTGGTACATTAC+TGG - Chr5:69657195-69657214 None:intergenic 40.0%
! CCTTCCATTTTCTGCTTGAT+GGG + Chr5:69659592-69659611 MsG0580027854.01.T01:intron 40.0%
! GGAGAAGGTTGCCTTATTAA+TGG - Chr5:69660429-69660448 None:intergenic 40.0%
! TCCTTCCATTTTCTGCTTGA+TGG + Chr5:69659591-69659610 MsG0580027854.01.T01:intron 40.0%
! TTTTTACATTGGCCCAAGTC+GGG + Chr5:69659115-69659134 MsG0580027854.01.T01:intron 40.0%
!! AATAGCTTTTGGTTGTCGTG+TGG - Chr5:69659801-69659820 None:intergenic 40.0%
!! ACAAAAGTACCAAGAGATGG+GGG - Chr5:69658145-69658164 None:intergenic 40.0%
!! ATAGCTTTTGGTTGTCGTGT+GGG - Chr5:69659800-69659819 None:intergenic 40.0%
!! GGTCTTTGCTTTTCATGCAT+TGG + Chr5:69661425-69661444 MsG0580027854.01.T01:intron 40.0%
!! TAATTACCTCTTGGTGGTGA+TGG - Chr5:69656600-69656619 None:intergenic 40.0%
!!! TTTTGTTGGAGGACTAGCTT+GGG + Chr5:69656266-69656285 MsG0580027854.01.T01:CDS 40.0%
!!! TTTTTGTTGGAGGACTAGCT+TGG + Chr5:69656265-69656284 MsG0580027854.01.T01:CDS 40.0%
!!! TTTTTTCCAATAGACCCCTC+AGG - Chr5:69659232-69659251 None:intergenic 40.0%
ACCAAGACAGCTCATTCACA+TGG - Chr5:69661276-69661295 None:intergenic 45.0%
AGACCTACTGTAATTGGAGG+GGG - Chr5:69657380-69657399 None:intergenic 45.0%
AGCTCATTCACATGGGTCTT+GGG - Chr5:69661268-69661287 None:intergenic 45.0%
AGCTTGTATGCGATGTGGTT+GGG - Chr5:69660328-69660347 None:intergenic 45.0%
AGGTACTTAAATCGTGCCCT+AGG + Chr5:69662072-69662091 MsG0580027854.01.T01:intron 45.0%
CCAAGACAGCTCATTCACAT+GGG - Chr5:69661275-69661294 None:intergenic 45.0%
CCCATCAAGCAGAAAATGGA+AGG - Chr5:69659595-69659614 None:intergenic 45.0%
CCCCTCAGGACTAACATTAT+TGG - Chr5:69659218-69659237 None:intergenic 45.0%
CTACGGTAGTTAACTACCGT+CGG - Chr5:69660946-69660965 None:intergenic 45.0%
CTTCCATCAATTACCGGGTT+TGG - Chr5:69656537-69656556 None:intergenic 45.0%
GAAGGAGGAGAAACCATTAG+AGG - Chr5:69662187-69662206 None:intergenic 45.0%
GAGACCTACTGTAATTGGAG+GGG - Chr5:69657381-69657400 None:intergenic 45.0%
GATCCAAACCCGGTAATTGA+TGG + Chr5:69656531-69656550 MsG0580027854.01.T01:CDS 45.0%
GCATGTGGTTTCTGTATGCA+AGG + Chr5:69661372-69661391 MsG0580027854.01.T01:intron 45.0%
GCTATAACATGTGGACACAG+GGG + Chr5:69661229-69661248 MsG0580027854.01.T01:intron 45.0%
GGTCAATGAGAGAGAGAAGA+GGG + Chr5:69661325-69661344 MsG0580027854.01.T01:intron 45.0%
GTAATGTAATGCTGCAGGGA+GGG + Chr5:69657056-69657075 MsG0580027854.01.T01:intron 45.0%
GTGATCCAGAATCAGCTAGA+AGG + Chr5:69656499-69656518 MsG0580027854.01.T01:CDS 45.0%
GTTCCTTCCATTGGTGTAGT+AGG - Chr5:69660372-69660391 None:intergenic 45.0%
TAATGTAATGCTGCAGGGAG+GGG + Chr5:69657057-69657076 MsG0580027854.01.T01:intron 45.0%
TACCCTACTACACCAATGGA+AGG + Chr5:69660366-69660385 MsG0580027854.01.T01:CDS 45.0%
TAGAAAGGGGGGCTATAATG+TGG + Chr5:69657895-69657914 MsG0580027854.01.T01:intron 45.0%
TGTAATGTAATGCTGCAGGG+AGG + Chr5:69657055-69657074 MsG0580027854.01.T01:intron 45.0%
TGTGGTTTCTGTATGCAAGG+TGG + Chr5:69661375-69661394 MsG0580027854.01.T01:intron 45.0%
! ATAGTCAGTCAAAGGGGTAC+TGG + Chr5:69657285-69657304 MsG0580027854.01.T01:intron 45.0%
! GGTGTTGAAAATGTACCCCT+TGG - Chr5:69660306-69660325 None:intergenic 45.0%
! TACAGGTTGAAACTAAGGGG+GGG - Chr5:69663251-69663270 None:intergenic 45.0%
!! TAGCTTTTGGTTGTCGTGTG+GGG - Chr5:69659799-69659818 None:intergenic 45.0%
!!! GCTTGTTTTCAGGGTTAGCT+AGG - Chr5:69657737-69657756 None:intergenic 45.0%
!! ACTAAATATATAAAATTTAT+TGG + Chr5:69658661-69658680 MsG0580027854.01.T01:intron 5.0%
!! TAAATAATATTAAATAATAG+AGG - Chr5:69662957-69662976 None:intergenic 5.0%
!! TTATATACTATTTATAATTT+CGG + Chr5:69656671-69656690 MsG0580027854.01.T01:intron 5.0%
!! TTTAGAAAATAATATTAAAT+AGG - Chr5:69662891-69662910 None:intergenic 5.0%
!!! ATAATAAGATAATAATTTTT+CGG - Chr5:69659077-69659096 None:intergenic 5.0%
!!! TTTTATTTATTTGTTAAATA+GGG + Chr5:69662399-69662418 MsG0580027854.01.T01:intron 5.0%
!!! TTTTTATTTATTTGTTAAAT+AGG + Chr5:69662398-69662417 MsG0580027854.01.T01:intron 5.0%
AAAGGGGGGCTATAATGTGG+TGG + Chr5:69657898-69657917 MsG0580027854.01.T01:intron 50.0%
AAATTTGTCCGGTCCCGACT+TGG - Chr5:69659131-69659150 None:intergenic 50.0%
AAGGGGGGCTATAATGTGGT+GGG + Chr5:69657899-69657918 MsG0580027854.01.T01:intron 50.0%
AATTTGTCCGGTCCCGACTT+GGG - Chr5:69659130-69659149 None:intergenic 50.0%
ACCACTACATGTGTTTGCCG+TGG - Chr5:69658071-69658090 None:intergenic 50.0%
ACCTCATCAGAGACAGCATC+TGG + Chr5:69663158-69663177 MsG0580027854.01.T01:CDS 50.0%
ATCAGAGACAGCATCTGGAG+TGG + Chr5:69663163-69663182 MsG0580027854.01.T01:CDS 50.0%
CAACCACATCGCATACAAGC+TGG + Chr5:69660327-69660346 MsG0580027854.01.T01:CDS 50.0%
CAGCTCATTCACATGGGTCT+TGG - Chr5:69661269-69661288 None:intergenic 50.0%
CAGCTTGTATGCGATGTGGT+TGG - Chr5:69660329-69660348 None:intergenic 50.0%
CCACCTACACTCCTGAATAC+GGG + Chr5:69660022-69660041 MsG0580027854.01.T01:CDS 50.0%
CCCACCTACACTCCTGAATA+CGG + Chr5:69660021-69660040 MsG0580027854.01.T01:CDS 50.0%
CCCATGTGAATGAGCTGTCT+TGG + Chr5:69661272-69661291 MsG0580027854.01.T01:intron 50.0%
GCTTGTATGCGATGTGGTTG+GGG - Chr5:69660327-69660346 None:intergenic 50.0%
GGAGGGAGATGCTTACTTGA+GGG - Chr5:69660050-69660069 None:intergenic 50.0%
GGGAGCAGTCAAGAGACATA+TGG - Chr5:69657360-69657379 None:intergenic 50.0%
GGGTCAATGAGAGAGAGAAG+AGG + Chr5:69661324-69661343 MsG0580027854.01.T01:intron 50.0%
GTTAGTCCTGAGGGGTCTAT+TGG + Chr5:69659223-69659242 MsG0580027854.01.T01:intron 50.0%
TACATATCAAGGTGGGGGTG+TGG + Chr5:69657080-69657099 MsG0580027854.01.T01:CDS 50.0%
TATGCAAGCAGCAGCACCAA+GGG + Chr5:69660287-69660306 MsG0580027854.01.T01:CDS 50.0%
TCCACGGCAAACACATGTAG+TGG + Chr5:69658067-69658086 MsG0580027854.01.T01:intron 50.0%
TCCAGATGCTGTCTCTGATG+AGG - Chr5:69663162-69663181 None:intergenic 50.0%
TTACCACTAGGAGAAGGGGT+AGG - Chr5:69660450-69660469 None:intergenic 50.0%
! ACAGGTTGAAACTAAGGGGG+GGG - Chr5:69663250-69663269 None:intergenic 50.0%
! ACATATCAAGGTGGGGGTGT+GGG + Chr5:69657081-69657100 MsG0580027854.01.T01:CDS 50.0%
! AGGGGTACATATCAAGGTGG+GGG + Chr5:69657075-69657094 MsG0580027854.01.T01:CDS 50.0%
! CAAGCCCTTCTAGCTGATTC+TGG - Chr5:69656507-69656526 None:intergenic 50.0%
! CCGTATTCAGGAGTGTAGGT+GGG - Chr5:69660024-69660043 None:intergenic 50.0%
! CGTATTCAGGAGTGTAGGTG+GGG - Chr5:69660023-69660042 None:intergenic 50.0%
! GAGGGGTACATATCAAGGTG+GGG + Chr5:69657074-69657093 MsG0580027854.01.T01:CDS 50.0%
! GGAGGGGTACATATCAAGGT+GGG + Chr5:69657073-69657092 MsG0580027854.01.T01:CDS 50.0%
! GTACCCGTATTCAGGAGTGT+AGG - Chr5:69660028-69660047 None:intergenic 50.0%
!! ACTTGAGGGTACCCGTATTC+AGG - Chr5:69660036-69660055 None:intergenic 50.0%
ATGCAAGCAGCAGCACCAAG+GGG + Chr5:69660288-69660307 MsG0580027854.01.T01:CDS 55.0%
CCTAGACCATCACCACCAAG+AGG + Chr5:69656591-69656610 MsG0580027854.01.T01:CDS 55.0%
CTAGGAGAAGGGGTAGGAGA+AGG - Chr5:69660444-69660463 None:intergenic 55.0%
CTATGCAAGCAGCAGCACCA+AGG + Chr5:69660286-69660305 MsG0580027854.01.T01:CDS 55.0%
GCTCCCCCTCCAATTACAGT+AGG + Chr5:69657374-69657393 MsG0580027854.01.T01:intron 55.0%
GGGAGGGAGATGCTTACTTG+AGG - Chr5:69660051-69660070 None:intergenic 55.0%
GGTCCAGCTTGTATGCGATG+TGG - Chr5:69660333-69660352 None:intergenic 55.0%
TCTCCTACCCCTTCTCCTAG+TGG + Chr5:69660444-69660463 MsG0580027854.01.T01:CDS 55.0%
TGGGTCTTGGGTTACCCATG+TGG - Chr5:69661256-69661275 None:intergenic 55.0%
! CAGGTTGAAACTAAGGGGGG+GGG - Chr5:69663249-69663268 None:intergenic 55.0%
! CATATCAAGGTGGGGGTGTG+GGG + Chr5:69657082-69657101 MsG0580027854.01.T01:CDS 55.0%
! CCCGTATTCAGGAGTGTAGG+TGG - Chr5:69660025-69660044 None:intergenic 55.0%
! GCAGGGAGGGGTACATATCA+AGG + Chr5:69657069-69657088 MsG0580027854.01.T01:intron 55.0%
! GGCTTGTGCTGATCCAAACC+CGG + Chr5:69656521-69656540 MsG0580027854.01.T01:CDS 55.0%
! GGGAGGGGTACATATCAAGG+TGG + Chr5:69657072-69657091 MsG0580027854.01.T01:intron 55.0%
! GTTGCTCCTCCTGCCATTTG+TGG - Chr5:69657165-69657184 None:intergenic 55.0%
!! CCTCTTGGTGGTGATGGTCT+AGG - Chr5:69656594-69656613 None:intergenic 55.0%
!! GTCAAAGGGGTACTGGTCCA+TGG + Chr5:69657292-69657311 MsG0580027854.01.T01:intron 55.0%
ACATTGGCCCAAGTCGGGAC+CGG + Chr5:69659120-69659139 MsG0580027854.01.T01:intron 60.0%
ATTTGTGGTGGCCCTCCTGC+CGG - Chr5:69657150-69657169 None:intergenic 60.0%
GTGGACACAGGGGTCCACAT+GGG + Chr5:69661239-69661258 MsG0580027854.01.T01:intron 60.0%
TGTGGACACAGGGGTCCACA+TGG + Chr5:69661238-69661257 MsG0580027854.01.T01:intron 60.0%
! GCTCCTCCTGCCATTTGTGG+TGG - Chr5:69657162-69657181 None:intergenic 60.0%
AGCACCAGGAGGAGCAGCAG+CGG + Chr5:69657110-69657129 MsG0580027854.01.T01:CDS 65.0%
GGAGGGCCACCACAAATGGC+AGG + Chr5:69657153-69657172 MsG0580027854.01.T01:CDS 65.0%
GGCAGGAGGGCCACCACAAA+TGG + Chr5:69657149-69657168 MsG0580027854.01.T01:CDS 65.0%
GGGCCACCACAAATGGCAGG+AGG + Chr5:69657156-69657175 MsG0580027854.01.T01:CDS 65.0%
ACGGCGGTGTTCCGGCAGGA+GGG + Chr5:69657136-69657155 MsG0580027854.01.T01:CDS 70.0%
AGCGGCGTACGGCGGTGTTC+CGG + Chr5:69657128-69657147 MsG0580027854.01.T01:CDS 70.0%
GGAGGAGCAGCAGCGGCGTA+CGG + Chr5:69657117-69657136 MsG0580027854.01.T01:CDS 70.0%
TACGCCGCTGCTGCTCCTCC+TGG - Chr5:69657117-69657136 None:intergenic 70.0%
TACGGCGGTGTTCCGGCAGG+AGG + Chr5:69657135-69657154 MsG0580027854.01.T01:CDS 70.0%
! CAAGGTGGGGGTGTGGGGAC+AGG + Chr5:69657087-69657106 MsG0580027854.01.T01:CDS 70.0%
!! GGTGTGGGGACAGGAGCACC+AGG + Chr5:69657096-69657115 MsG0580027854.01.T01:CDS 70.0%
!! GTGGGGACAGGAGCACCAGG+AGG + Chr5:69657099-69657118 MsG0580027854.01.T01:CDS 70.0%
GCGTACGGCGGTGTTCCGGC+AGG + Chr5:69657132-69657151 MsG0580027854.01.T01:CDS 75.0%
GGAGCAGCAGCGGCGTACGG+CGG + Chr5:69657120-69657139 MsG0580027854.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 69656213 69663443 69656213 ID=MsG0580027854.01;Name=MsG0580027854.01
Chr5 mRNA 69656213 69663443 69656213 ID=MsG0580027854.01.T01;Parent=MsG0580027854.01;Name=MsG0580027854.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0.4|0.33|1|1|1|6|211|286
Chr5 exon 69656213 69656395 69656213 ID=MsG0580027854.01.T01:exon:4298;Parent=MsG0580027854.01.T01
Chr5 exon 69656489 69656612 69656489 ID=MsG0580027854.01.T01:exon:4299;Parent=MsG0580027854.01.T01
Chr5 exon 69657073 69657214 69657073 ID=MsG0580027854.01.T01:exon:4300;Parent=MsG0580027854.01.T01
Chr5 exon 69660017 69660053 69660017 ID=MsG0580027854.01.T01:exon:4301;Parent=MsG0580027854.01.T01
Chr5 exon 69660186 69660465 69660186 ID=MsG0580027854.01.T01:exon:4302;Parent=MsG0580027854.01.T01
Chr5 exon 69663138 69663443 69663138 ID=MsG0580027854.01.T01:exon:4303;Parent=MsG0580027854.01.T01
Chr5 CDS 69656213 69656395 69656213 ID=MsG0580027854.01.T01:cds;Parent=MsG0580027854.01.T01
Chr5 CDS 69656489 69656612 69656489 ID=MsG0580027854.01.T01:cds;Parent=MsG0580027854.01.T01
Chr5 CDS 69657073 69657214 69657073 ID=MsG0580027854.01.T01:cds;Parent=MsG0580027854.01.T01
Chr5 CDS 69660017 69660053 69660017 ID=MsG0580027854.01.T01:cds;Parent=MsG0580027854.01.T01
Chr5 CDS 69660186 69660465 69660186 ID=MsG0580027854.01.T01:cds;Parent=MsG0580027854.01.T01
Chr5 CDS 69663138 69663232 69663138 ID=MsG0580027854.01.T01:cds;Parent=MsG0580027854.01.T01
Chr5 three_prime_UTR 69663233 69663443 69663233 ID=MsG0580027854.01.T01:three_prime_utr;Parent=MsG0580027854.01.T01
Gene Sequence

>MsG0580027854.01.T01

ATGGCTTATCCACATTATCGATCACAATTTGGAGACACAACATTCACTAAGGTTTTTGTTGGAGGACTAGCTTGGGAAACTCCAACTGATGAAATGAGGACATATTTTGAACAATTTGGTGACATACTTGAAGCTGTCATTATCACTGATAAGAATACAGGAAAATCTAAAGGATACGGATTTGTAACATTTCGTGATCCAGAATCAGCTAGAAGGGCTTGTGCTGATCCAAACCCGGTAATTGATGGAAGAAGAGCTAATTGTAACATTGCTTCTCTTGGTCGTCCTAGACCATCACCACCAAGAGGGAGGGGTACATATCAAGGTGGGGGTGTGGGGACAGGAGCACCAGGAGGAGCAGCAGCGGCGTACGGCGGTGTTCCGGCAGGAGGGCCACCACAAATGGCAGGAGGAGCAACAGCAGCTCCAGTAATGTACCAACCATATGGCTACCCCACCTACACTCCTGAATACGGGTACCCTCAAGCTACAATGTATAACCCACAGATTCAGCAAGCACAATACTATCAACAACTTTATGGACCATCATCTTCAACAATGGGTTCACCATATTATTATGGCTATTCTATGCAAGCAGCAGCACCAAGGGGTACATTTTCAACACCCCAACCACATCGCATACAAGCTGGACCATCCTATCTATACTACCCTACTACACCAATGGAAGGAACAACTTTCTCTGCTGCATATCGTCCACTTCAACAACCATTAATAAGGCAACCTTCTCCTACCCCTTCTCCTAGTGATTCACAGACTCAGCAACGTACCTCATCAGAGACAGCATCTGGAGTGGTTATAACTTCGGAAAGTTCAAATACTCAAGGGAAGAACAACAACTAA
Protein sequence

>MsG0580027854.01.T01

MAYPHYRSQFGDTTFTKVFVGGLAWETPTDEMRTYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACADPNPVIDGRRANCNIASLGRPRPSPPRGRGTYQGGGVGTGAPGGAAAAYGGVPAGGPPQMAGGATAAPVMYQPYGYPTYTPEYGYPQATMYNPQIQQAQYYQQLYGPSSSTMGSPYYYGYSMQAAAPRGTFSTPQPHRIQAGPSYLYYPTTPMEGTTFSAAYRPLQQPLIRQPSPTPSPSDSQTQQRTSSETASGVVITSESSNTQGKNNN*