Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033696.01.T01 | XP_003593807.1 | 97.619 | 294 | 7 | 0 | 1 | 294 | 1 | 294 | 0 | 585 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033696.01.T01 | P58465 | 46.626 | 163 | 86 | 1 | 106 | 268 | 105 | 266 | 2.19E-37 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033696.01.T01 | G7ILM8 | 97.619 | 294 | 7 | 0 | 1 | 294 | 1 | 294 | 0.0 | 585 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0680033696.01 | 0.809438 | 1.892101e-50 | 1.110918e-47 |
| MsG0080048006.01 | MsG0680033696.01 | 0.830564 | 2.735227e-55 | 2.892331e-52 |
| MsG0080048258.01 | MsG0680033696.01 | 0.833568 | 4.950330e-56 | 5.722981e-53 |
| MsG0080048311.01 | MsG0680033696.01 | 0.819180 | 1.329678e-52 | 1.015908e-49 |
| MsG0080048775.01 | MsG0680033696.01 | 0.812313 | 4.515455e-51 | 2.861374e-48 |
| MsG0080048781.01 | MsG0680033696.01 | 0.867777 | 1.065805e-65 | 3.765875e-62 |
| MsG0080049140.01 | MsG0680033696.01 | 0.800435 | 1.443280e-48 | 6.719885e-46 |
| MsG0180000111.01 | MsG0680033696.01 | 0.810623 | 1.051424e-50 | 6.369229e-48 |
| MsG0180001293.01 | MsG0680033696.01 | 0.835349 | 1.766990e-56 | 2.155239e-53 |
| MsG0180002218.01 | MsG0680033696.01 | 0.821116 | 4.790623e-53 | 3.862819e-50 |
| MsG0180002397.01 | MsG0680033696.01 | 0.846182 | 2.549734e-59 | 4.352185e-56 |
| MsG0180002583.01 | MsG0680033696.01 | 0.812555 | 3.996103e-51 | 2.548713e-48 |
| MsG0180002984.01 | MsG0680033696.01 | 0.804295 | 2.314060e-49 | 1.188757e-46 |
| MsG0180003427.01 | MsG0680033696.01 | 0.823507 | 1.334493e-53 | 1.151314e-50 |
| MsG0180003485.01 | MsG0680033696.01 | 0.818421 | 1.977543e-52 | 1.479686e-49 |
| MsG0180003658.01 | MsG0680033696.01 | 0.864762 | 9.629704e-65 | 3.058087e-61 |
| MsG0180003698.01 | MsG0680033696.01 | 0.835503 | 1.615500e-56 | 1.979379e-53 |
| MsG0180003796.01 | MsG0680033696.01 | 0.856902 | 2.350474e-62 | 5.696734e-59 |
| MsG0180003857.01 | MsG0680033696.01 | 0.843383 | 1.449117e-58 | 2.263619e-55 |
| MsG0180004120.01 | MsG0680033696.01 | 0.807321 | 5.352765e-50 | 2.972404e-47 |
| MsG0180004126.01 | MsG0680033696.01 | 0.879566 | 1.122848e-69 | 6.116574e-66 |
| MsG0180004185.01 | MsG0680033696.01 | 0.846542 | 2.034078e-59 | 3.513018e-56 |
| MsG0180004299.01 | MsG0680033696.01 | 0.856083 | 4.088901e-62 | 9.644733e-59 |
| MsG0180004375.01 | MsG0680033696.01 | 0.804269 | 2.342776e-49 | 1.202663e-46 |
| MsG0180004538.01 | MsG0680033696.01 | 0.834355 | 3.143670e-56 | 3.721552e-53 |
| MsG0180004583.01 | MsG0680033696.01 | 0.839906 | 1.197236e-57 | 1.677506e-54 |
| MsG0180004995.01 | MsG0680033696.01 | 0.817602 | 3.028419e-52 | 2.215336e-49 |
| MsG0180005002.01 | MsG0680033696.01 | 0.807382 | 5.194168e-50 | 2.888908e-47 |
| MsG0180005048.01 | MsG0680033696.01 | 0.809425 | 1.904047e-50 | 1.117577e-47 |
| MsG0180005435.01 | MsG0680033696.01 | 0.809238 | 2.089024e-50 | 1.220045e-47 |
| MsG0180005835.01 | MsG0680033696.01 | 0.822735 | 2.020466e-53 | 1.705584e-50 |
| MsG0180006133.01 | MsG0680033696.01 | 0.834251 | 3.338675e-56 | 3.940088e-53 |
| MsG0280010579.01 | MsG0680033696.01 | 0.849651 | 2.820695e-60 | 5.384224e-57 |
| MsG0280011154.01 | MsG0680033696.01 | 0.808168 | 3.536722e-50 | 2.007988e-47 |
| MsG0280011331.01 | MsG0680033696.01 | 0.812666 | 3.778970e-51 | 2.417232e-48 |
| MsG0380011846.01 | MsG0680033696.01 | 0.806818 | 6.838277e-50 | 3.748071e-47 |
| MsG0380012118.01 | MsG0680033696.01 | 0.809042 | 2.300440e-50 | 1.336451e-47 |
| MsG0380012788.01 | MsG0680033696.01 | 0.802399 | 5.714487e-49 | 2.796582e-46 |
| MsG0380013041.01 | MsG0680033696.01 | 0.807408 | 5.129452e-50 | 2.854899e-47 |
| MsG0380014751.01 | MsG0680033696.01 | 0.802802 | 4.718435e-49 | 2.332967e-46 |
| MsG0680031616.01 | MsG0680033696.01 | 0.833312 | 5.731673e-56 | 6.576276e-53 |
| MsG0680032772.01 | MsG0680033696.01 | 0.806831 | 6.795185e-50 | 3.725651e-47 |
| MsG0680033696.01 | MsG0680035350.01 | 0.848751 | 5.018530e-60 | 9.304394e-57 |
| MsG0680033696.01 | MsG0680035776.01 | 0.824894 | 6.301299e-54 | 5.655744e-51 |
| MsG0680033696.01 | MsG0780036534.01 | 0.811172 | 7.996451e-51 | 4.915121e-48 |
| MsG0680033696.01 | MsG0780037158.01 | 0.816880 | 4.401037e-52 | 3.156584e-49 |
| MsG0680033696.01 | MsG0780037741.01 | 0.827731 | 1.330367e-54 | 1.295292e-51 |
| MsG0680033696.01 | MsG0780038402.01 | 0.859679 | 3.500729e-63 | 9.322267e-60 |
| MsG0680033696.01 | MsG0780038445.01 | 0.802871 | 4.566006e-49 | 2.261530e-46 |
| MsG0680033696.01 | MsG0780038736.01 | 0.818565 | 1.834705e-52 | 1.378123e-49 |
| MsG0680033696.01 | MsG0780039861.01 | 0.873585 | 1.312406e-67 | 5.725678e-64 |
| MsG0680033696.01 | MsG0780040364.01 | 0.861328 | 1.108428e-63 | 3.125037e-60 |
| MsG0680033696.01 | MsG0780040620.01 | 0.838394 | 2.951588e-57 | 3.948031e-54 |
| MsG0680033696.01 | MsG0780040641.01 | 0.822891 | 1.858774e-53 | 1.575940e-50 |
| MsG0680033696.01 | MsG0780040828.01 | 0.821317 | 4.304592e-53 | 3.490268e-50 |
| MsG0680033696.01 | MsG0780041063.01 | 0.806302 | 8.785519e-50 | 4.752073e-47 |
| MsG0680033696.01 | MsG0780041132.01 | 0.832786 | 7.749702e-56 | 8.752220e-53 |
| MsG0680033696.01 | MsG0780041141.01 | 0.838613 | 2.592163e-57 | 3.490623e-54 |
| MsG0680033696.01 | MsG0780041142.01 | 0.819522 | 1.111447e-52 | 8.573003e-50 |
| MsG0680033696.01 | MsG0780041143.01 | 0.869724 | 2.498173e-66 | 9.470082e-63 |
| MsG0680033696.01 | MsG0780041340.01 | 0.865900 | 4.221965e-65 | 1.396308e-61 |
| MsG0680033696.01 | MsG0780041359.01 | 0.816479 | 5.414304e-52 | 3.840680e-49 |
| MsG0680033696.01 | MsG0780041756.01 | 0.825047 | 5.800337e-54 | 5.228782e-51 |
| MsG0680033696.01 | MsG0880041930.01 | 0.813997 | 1.927650e-51 | 1.278055e-48 |
| MsG0680033696.01 | MsG0880042366.01 | 0.800101 | 1.687643e-48 | 7.791163e-46 |
| MsG0680033696.01 | MsG0880042906.01 | 0.837001 | 6.722139e-57 | 8.616525e-54 |
| MsG0680033696.01 | MsG0880042927.01 | 0.814851 | 1.248368e-51 | 8.470034e-49 |
| MsG0680033696.01 | MsG0880042929.01 | 0.809594 | 1.751773e-50 | 1.032840e-47 |
| MsG0680033696.01 | MsG0880043684.01 | 0.809013 | 2.333996e-50 | 1.354835e-47 |
| MsG0680033696.01 | MsG0880043714.01 | 0.837653 | 4.578591e-57 | 5.987758e-54 |
| MsG0680033696.01 | MsG0880044103.01 | 0.819215 | 1.305762e-52 | 9.985960e-50 |
| MsG0680033696.01 | MsG0880044340.01 | 0.818287 | 2.120596e-52 | 1.580714e-49 |
| MsG0680033696.01 | MsG0880044437.01 | 0.801560 | 8.502052e-49 | 4.072670e-46 |
| MsG0680033696.01 | MsG0880045439.01 | 0.827763 | 1.306834e-54 | 1.273555e-51 |
| MsG0680033696.01 | MsG0880045552.01 | 0.821675 | 3.559704e-53 | 2.915360e-50 |
| MsG0680033696.01 | MsG0880045584.01 | 0.809626 | 1.724553e-50 | 1.017687e-47 |
| MsG0680033696.01 | MsG0880045612.01 | 0.882303 | 1.166836e-70 | 7.071327e-67 |
| MsG0680033696.01 | MsG0880045647.01 | 0.815489 | 9.007547e-52 | 6.219350e-49 |
| MsG0680033696.01 | MsG0880046208.01 | 0.810262 | 1.258167e-50 | 7.548880e-48 |
| MsG0680033696.01 | MsG0880046431.01 | 0.830208 | 3.341700e-55 | 3.497596e-52 |
| MsG0680033696.01 | MsG0880046646.01 | 0.841063 | 5.964092e-58 | 8.660597e-55 |
| MsG0680033696.01 | MsG0880046885.01 | 0.856194 | 3.792488e-62 | 8.978402e-59 |
| MsG0680033696.01 | MsG0880046904.01 | 0.839183 | 1.845536e-57 | 2.528723e-54 |
| MsG0680033696.01 | MsG0880046905.01 | 0.803767 | 2.979660e-49 | 1.510049e-46 |
| MsG0680033696.01 | MsG0880046906.01 | 0.822220 | 2.662280e-53 | 2.214419e-50 |
| MsG0680033696.01 | MsG0880047223.01 | 0.812327 | 4.482155e-51 | 2.841490e-48 |
| MsG0680033696.01 | MsG0880047226.01 | 0.817183 | 3.764161e-52 | 2.722099e-49 |
| MsG0680033696.01 | MsG0880047640.01 | 0.830758 | 2.451892e-55 | 2.607738e-52 |
| MsG0680033696.01 | MsG0880047649.01 | 0.871985 | 4.502419e-67 | 1.852030e-63 |
| MsG0480018526.01 | MsG0680033696.01 | 0.882462 | 1.021347e-70 | 6.227093e-67 |
| MsG0480018785.01 | MsG0680033696.01 | 0.822400 | 2.417232e-53 | 2.021188e-50 |
| MsG0480018885.01 | MsG0680033696.01 | 0.814443 | 1.537010e-51 | 1.031465e-48 |
| MsG0480020856.01 | MsG0680033696.01 | 0.811393 | 7.161144e-51 | 4.427533e-48 |
| MsG0480021016.01 | MsG0680033696.01 | 0.800658 | 1.299743e-48 | 6.085921e-46 |
| MsG0480021902.01 | MsG0680033696.01 | 0.819927 | 8.979108e-53 | 7.004908e-50 |
| MsG0480022559.01 | MsG0680033696.01 | 0.848506 | 5.870610e-60 | 1.079825e-56 |
| MsG0480022784.01 | MsG0680033696.01 | 0.839491 | 1.535111e-57 | 2.123443e-54 |
| MsG0480022991.01 | MsG0680033696.01 | 0.832369 | 9.833855e-56 | 1.096865e-52 |
| MsG0480023003.01 | MsG0680033696.01 | 0.818548 | 1.850510e-52 | 1.389427e-49 |
| MsG0480023194.01 | MsG0680033696.01 | 0.846397 | 2.228526e-59 | 3.830880e-56 |
| MsG0480023296.01 | MsG0680033696.01 | 0.856877 | 2.389601e-62 | 5.786737e-59 |
| MsG0480023484.01 | MsG0680033696.01 | 0.802890 | 4.525565e-49 | 2.242568e-46 |
| MsG0480023653.01 | MsG0680033696.01 | 0.822044 | 2.923888e-53 | 2.419811e-50 |
| MsG0480023672.01 | MsG0680033696.01 | 0.879253 | 1.449568e-69 | 7.806148e-66 |
| MsG0480023706.01 | MsG0680033696.01 | 0.823511 | 1.331445e-53 | 1.148814e-50 |
| MsG0580024657.01 | MsG0680033696.01 | 0.898177 | 6.849971e-77 | 8.007976e-73 |
| MsG0580024742.01 | MsG0680033696.01 | 0.815266 | 1.009703e-51 | 6.928511e-49 |
| MsG0580024787.01 | MsG0680033696.01 | 0.881161 | 3.021379e-70 | 1.751110e-66 |
| MsG0580024813.01 | MsG0680033696.01 | 0.850426 | 1.711335e-60 | 3.351103e-57 |
| MsG0580024954.01 | MsG0680033696.01 | 0.826382 | 2.797162e-54 | 2.619159e-51 |
| MsG0580025056.01 | MsG0680033696.01 | 0.807000 | 6.258397e-50 | 3.446331e-47 |
| MsG0580025093.01 | MsG0680033696.01 | 0.865361 | 6.242051e-65 | 2.025246e-61 |
| MsG0580025177.01 | MsG0680033696.01 | 0.805206 | 1.492721e-49 | 7.850423e-47 |
| MsG0580025186.01 | MsG0680033696.01 | 0.819755 | 9.832324e-53 | 7.633608e-50 |
| MsG0580025506.01 | MsG0680033696.01 | 0.803459 | 3.451147e-49 | 1.735222e-46 |
| MsG0580025515.01 | MsG0680033696.01 | 0.803848 | 2.866272e-49 | 1.455680e-46 |
| MsG0580025775.01 | MsG0680033696.01 | 0.873012 | 2.043425e-67 | 8.730808e-64 |
| MsG0380015161.01 | MsG0680033696.01 | 0.801079 | 1.066268e-48 | 5.046449e-46 |
| MsG0380015219.01 | MsG0680033696.01 | 0.833085 | 6.531513e-56 | 7.443340e-53 |
| MsG0380015394.01 | MsG0680033696.01 | 0.840183 | 1.013627e-57 | 1.432569e-54 |
| MsG0380015816.01 | MsG0680033696.01 | 0.813847 | 2.080759e-51 | 1.373934e-48 |
| MsG0380015954.01 | MsG0680033696.01 | 0.811656 | 6.277746e-51 | 3.908113e-48 |
| MsG0380016091.01 | MsG0680033696.01 | 0.822752 | 2.002471e-53 | 1.691217e-50 |
| MsG0380016217.01 | MsG0680033696.01 | 0.836920 | 7.050654e-57 | 9.014827e-54 |
| MsG0380016225.01 | MsG0680033696.01 | 0.819201 | 1.315491e-52 | 1.005622e-49 |
| MsG0380016703.01 | MsG0680033696.01 | 0.800298 | 1.539279e-48 | 7.142021e-46 |
| MsG0380016722.01 | MsG0680033696.01 | 0.801849 | 7.415950e-49 | 3.578663e-46 |
| MsG0380017164.01 | MsG0680033696.01 | 0.834233 | 3.373729e-56 | 3.978998e-53 |
| MsG0380017282.01 | MsG0680033696.01 | 0.800029 | 1.745653e-48 | 8.044206e-46 |
| MsG0380017361.01 | MsG0680033696.01 | 0.862437 | 5.069574e-64 | 1.484797e-60 |
| MsG0380017605.01 | MsG0680033696.01 | 0.849420 | 3.270331e-60 | 6.195724e-57 |
| MsG0380017632.01 | MsG0680033696.01 | 0.820265 | 7.514879e-53 | 5.917659e-50 |
| MsG0580028756.01 | MsG0680033696.01 | 0.847128 | 1.406769e-59 | 2.475982e-56 |
| MsG0580028923.01 | MsG0680033696.01 | 0.840700 | 7.423948e-58 | 1.066141e-54 |
| MsG0580029123.01 | MsG0680033696.01 | 0.852489 | 4.464110e-61 | 9.343096e-58 |
| MsG0580029261.01 | MsG0680033696.01 | 0.839983 | 1.143128e-57 | 1.605674e-54 |
| MsG0580029298.01 | MsG0680033696.01 | 0.801319 | 9.525304e-49 | 4.535287e-46 |
| MsG0580029591.01 | MsG0680033696.01 | 0.854740 | 1.006540e-61 | 2.270430e-58 |
| MsG0280006540.01 | MsG0680033696.01 | 0.861226 | 1.190267e-63 | 3.343565e-60 |
| MsG0280006563.01 | MsG0680033696.01 | 0.885093 | 1.093902e-71 | 7.407907e-68 |
| MsG0280007359.01 | MsG0680033696.01 | 0.842265 | 2.873917e-58 | 4.333943e-55 |
| MsG0280007419.01 | MsG0680033696.01 | 0.808008 | 3.823892e-50 | 2.161806e-47 |
| MsG0280007761.01 | MsG0680033696.01 | 0.826236 | 3.030054e-54 | 2.825356e-51 |
| MsG0280009752.01 | MsG0680033696.01 | 0.813741 | 2.195791e-51 | 1.445762e-48 |
| MsG0280009866.01 | MsG0680033696.01 | 0.819445 | 1.157265e-52 | 8.907329e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033696.01.T01 | MTR_2g017810 | 97.619 | 294 | 7 | 0 | 1 | 294 | 1 | 294 | 0.0 | 585 |
| MsG0680033696.01.T01 | MTR_5g045920 | 37.714 | 175 | 103 | 2 | 101 | 274 | 123 | 292 | 1.97e-28 | 111 |
| MsG0680033696.01.T01 | MTR_3g006690 | 41.143 | 175 | 99 | 3 | 98 | 269 | 284 | 457 | 1.53e-26 | 108 |
| MsG0680033696.01.T01 | MTR_2g049420 | 36.325 | 234 | 138 | 5 | 54 | 280 | 103 | 332 | 2.36e-26 | 106 |
| MsG0680033696.01.T01 | MTR_2g049420 | 36.325 | 234 | 138 | 5 | 54 | 280 | 240 | 469 | 6.30e-26 | 107 |
| MsG0680033696.01.T01 | MTR_2g049420 | 36.325 | 234 | 138 | 5 | 54 | 280 | 231 | 460 | 7.46e-26 | 106 |
| MsG0680033696.01.T01 | MTR_3g085400 | 40.972 | 144 | 83 | 2 | 109 | 251 | 323 | 465 | 1.87e-25 | 105 |
| MsG0680033696.01.T01 | MTR_3g085395 | 39.583 | 144 | 85 | 2 | 109 | 251 | 201 | 343 | 5.41e-23 | 97.8 |
| MsG0680033696.01.T01 | MTR_3g070810 | 38.217 | 157 | 78 | 4 | 106 | 243 | 70 | 226 | 3.84e-20 | 88.2 |
| MsG0680033696.01.T01 | MTR_5g082660 | 37.580 | 157 | 79 | 4 | 106 | 243 | 96 | 252 | 6.68e-17 | 79.7 |
| MsG0680033696.01.T01 | MTR_5g095530 | 31.210 | 157 | 89 | 2 | 91 | 244 | 172 | 312 | 1.06e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033696.01.T01 | AT5G45700 | 43.463 | 283 | 146 | 6 | 1 | 280 | 1 | 272 | 1.96e-62 | 199 |
| MsG0680033696.01.T01 | AT1G29780 | 56.886 | 167 | 71 | 1 | 107 | 272 | 49 | 215 | 6.81e-59 | 188 |
| MsG0680033696.01.T01 | AT1G29770 | 52.571 | 175 | 81 | 2 | 107 | 279 | 102 | 276 | 4.38e-57 | 185 |
| MsG0680033696.01.T01 | AT5G11860 | 37.576 | 165 | 101 | 2 | 109 | 272 | 113 | 276 | 2.63e-27 | 108 |
| MsG0680033696.01.T01 | AT5G11860 | 37.576 | 165 | 101 | 2 | 109 | 272 | 113 | 276 | 2.63e-27 | 108 |
| MsG0680033696.01.T01 | AT5G11860 | 37.576 | 165 | 101 | 2 | 109 | 272 | 113 | 276 | 2.63e-27 | 108 |
| MsG0680033696.01.T01 | AT5G11860 | 37.576 | 165 | 101 | 2 | 109 | 272 | 113 | 276 | 2.63e-27 | 108 |
| MsG0680033696.01.T01 | AT5G11860 | 37.576 | 165 | 101 | 2 | 109 | 272 | 113 | 276 | 2.63e-27 | 108 |
| MsG0680033696.01.T01 | AT5G46410 | 39.884 | 173 | 102 | 2 | 109 | 280 | 285 | 456 | 3.48e-25 | 104 |
| MsG0680033696.01.T01 | AT5G46410 | 39.884 | 173 | 102 | 2 | 109 | 280 | 282 | 453 | 3.83e-25 | 104 |
| MsG0680033696.01.T01 | AT5G46410 | 39.884 | 173 | 102 | 2 | 109 | 280 | 282 | 453 | 3.83e-25 | 104 |
| MsG0680033696.01.T01 | AT4G18140 | 39.884 | 173 | 102 | 2 | 109 | 280 | 270 | 441 | 1.44e-23 | 100 |
| MsG0680033696.01.T01 | AT4G18140 | 39.884 | 173 | 102 | 2 | 109 | 280 | 270 | 441 | 1.44e-23 | 100 |
| MsG0680033696.01.T01 | AT4G18140 | 39.884 | 173 | 102 | 2 | 109 | 280 | 270 | 441 | 1.44e-23 | 100 |
| MsG0680033696.01.T01 | AT4G18140 | 40.606 | 165 | 96 | 2 | 109 | 272 | 270 | 433 | 4.13e-23 | 99.0 |
| MsG0680033696.01.T01 | AT4G18140 | 40.606 | 165 | 96 | 2 | 109 | 272 | 270 | 433 | 4.13e-23 | 99.0 |
| MsG0680033696.01.T01 | AT4G18140 | 40.606 | 165 | 96 | 2 | 109 | 272 | 270 | 433 | 5.88e-23 | 98.2 |
| MsG0680033696.01.T01 | AT1G55900 | 31.792 | 173 | 99 | 2 | 91 | 260 | 171 | 327 | 4.60e-19 | 86.7 |
| MsG0680033696.01.T01 | AT1G55900 | 31.792 | 173 | 99 | 2 | 91 | 260 | 171 | 327 | 4.64e-19 | 86.7 |
| MsG0680033696.01.T01 | AT3G55960 | 36.184 | 152 | 78 | 4 | 106 | 238 | 96 | 247 | 2.38e-16 | 78.2 |
Find 59 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAAGCTTCTCACAAAAC+TGG | 0.265788 | 6:+71830230 | MsG0680033696.01.T01:CDS |
| AGGGAAGCTTGTGAAAGATT+TGG | 0.293676 | 6:+71830701 | MsG0680033696.01.T01:CDS |
| TTATTTCGCATCGGCTTTAT+AGG | 0.299291 | 6:+71830658 | MsG0680033696.01.T01:CDS |
| GGGAAGCTTGTGAAAGATTT+GGG | 0.307134 | 6:+71830702 | MsG0680033696.01.T01:CDS |
| GCTTAAGGAGTATGCGAGTT+TGG | 0.339130 | 6:+71830608 | MsG0680033696.01.T01:CDS |
| GGTTGATTCGAAAACGAAAC+TGG | 0.341731 | 6:-71830771 | None:intergenic |
| GTTAATGTCTTTGATTGATT+TGG | 0.348380 | 6:-71830124 | None:intergenic |
| TTCCACCTTCAATATCTAAT+CGG | 0.378188 | 6:+71830391 | MsG0680033696.01.T01:CDS |
| TATTTCGCATCGGCTTTATA+GGG | 0.378274 | 6:+71830659 | MsG0680033696.01.T01:CDS |
| GCCGCGACGACGTTCTTTAT+CGG | 0.415564 | 6:-71830171 | None:intergenic |
| TGGACCGGTTGGACCGGAAC+GGG | 0.415871 | 6:+71830634 | MsG0680033696.01.T01:CDS |
| ATGCTTGTGATCGTGAGCTT+TGG | 0.419497 | 6:+71830829 | MsG0680033696.01.T01:CDS |
| TTAATCAAAATCGCATTCTC+AGG | 0.423966 | 6:-71830792 | None:intergenic |
| GTAGTCCGGCCGGTGATTGA+TGG | 0.425963 | 6:+71830489 | MsG0680033696.01.T01:CDS |
| CTCGTCTCAGTTCTTCAAAT+CGG | 0.429741 | 6:+71830259 | MsG0680033696.01.T01:CDS |
| GATCTGATCAAAGGCGTGTC+TGG | 0.434592 | 6:+71830948 | MsG0680033696.01.T01:CDS |
| TCTTGATTTAGATGAAACTT+TGG | 0.436405 | 6:+71830425 | MsG0680033696.01.T01:CDS |
| TGTGGGAAGGGATTTGAAGA+AGG | 0.467439 | 6:+71830728 | MsG0680033696.01.T01:CDS |
| TAAACCCGTTCCGGTCCAAC+CGG | 0.468555 | 6:-71830638 | None:intergenic |
| GATGCGAAATAAACCCGTTC+CGG | 0.471268 | 6:-71830647 | None:intergenic |
| ACCGGGGATTGATGAATTGT+TGG | 0.482144 | 6:+71830542 | MsG0680033696.01.T01:CDS |
| GTGGACCGGTTGGACCGGAA+CGG | 0.486922 | 6:+71830633 | MsG0680033696.01.T01:CDS |
| CTTTGAAATGCGGCGGTGGA+TGG | 0.490657 | 6:-71830214 | None:intergenic |
| GGAGTATGCGAGTTTGGTTG+TGG | 0.507228 | 6:+71830614 | MsG0680033696.01.T01:CDS |
| TTCTACGTGTTGAAGCGACC+GGG | 0.513582 | 6:+71830525 | MsG0680033696.01.T01:CDS |
| TAGGGATTCGTGTAGGAATG+TGG | 0.519949 | 6:+71830677 | MsG0680033696.01.T01:CDS |
| AAATCAAATTTCTCCGGCGG+TGG | 0.522620 | 6:-71830465 | None:intergenic |
| TCACAAGCATCATCAACAAA+AGG | 0.529060 | 6:-71830816 | None:intergenic |
| AGCGTTGAAATATGAGGTGG+TGG | 0.529684 | 6:+71830572 | MsG0680033696.01.T01:CDS |
| CGTGAGCTTTGGAAATTGAG+AGG | 0.530120 | 6:+71830840 | MsG0680033696.01.T01:CDS |
| TTTCTACGTGTTGAAGCGAC+CGG | 0.530989 | 6:+71830524 | MsG0680033696.01.T01:CDS |
| TGGTTGTGGACCGGTTGGAC+CGG | 0.534625 | 6:+71830628 | MsG0680033696.01.T01:CDS |
| ATGCGAGTTTGGTTGTGGAC+CGG | 0.538407 | 6:+71830619 | MsG0680033696.01.T01:CDS |
| TCAAAGCTTCTCACAAAACT+GGG | 0.544321 | 6:+71830231 | MsG0680033696.01.T01:CDS |
| ACTACAAAATCAAATTTCTC+CGG | 0.568154 | 6:-71830471 | None:intergenic |
| GGAACGGGTTTATTTCGCAT+CGG | 0.571199 | 6:+71830649 | MsG0680033696.01.T01:CDS |
| GATTCGTGTAGGAATGTGGA+AGG | 0.572672 | 6:+71830681 | MsG0680033696.01.T01:CDS |
| AAGACATTAACCGTCGTCGT+TGG | 0.574857 | 6:+71830136 | MsG0680033696.01.T01:CDS |
| GAAGCTTTGAAATGCGGCGG+TGG | 0.579230 | 6:-71830218 | None:intergenic |
| TTGTGAGAAGCTTTGAAATG+CGG | 0.588582 | 6:-71830224 | None:intergenic |
| ATCGGTTCACCATCAATCAC+CGG | 0.589525 | 6:-71830498 | None:intergenic |
| TCCAACAATTCATCAATCCC+CGG | 0.590132 | 6:-71830543 | None:intergenic |
| TCTACGTGTTGAAGCGACCG+GGG | 0.598046 | 6:+71830526 | MsG0680033696.01.T01:CDS |
| GATGGAAGAAAGAACGGCGG+AGG | 0.608748 | 6:-71830196 | None:intergenic |
| TCCGATAAAGAACGTCGTCG+CGG | 0.612729 | 6:+71830170 | MsG0680033696.01.T01:CDS |
| TTCAACACGTAGAAATCCAT+CGG | 0.617017 | 6:-71830516 | None:intergenic |
| TCGTGTTCAGATCTGATCAA+AGG | 0.617362 | 6:+71830939 | MsG0680033696.01.T01:CDS |
| GGTGATTGATGGTGAACCGA+TGG | 0.621208 | 6:+71830500 | MsG0680033696.01.T01:CDS |
| GGCTTTATAGGGATTCGTGT+AGG | 0.622796 | 6:+71830670 | MsG0680033696.01.T01:CDS |
| GCGGTGGATGGAAGAAAGAA+CGG | 0.625468 | 6:-71830202 | None:intergenic |
| TTCCGATTAGATATTGAAGG+TGG | 0.632258 | 6:-71830393 | None:intergenic |
| AGCGTTAGCGTTGAAATATG+AGG | 0.636943 | 6:+71830566 | MsG0680033696.01.T01:CDS |
| GTTCACCATCAATCACCGGC+CGG | 0.662293 | 6:-71830494 | None:intergenic |
| TGAGAAGCTTTGAAATGCGG+CGG | 0.672239 | 6:-71830221 | None:intergenic |
| ACAAAATCAAATTTCTCCGG+CGG | 0.674025 | 6:-71830468 | None:intergenic |
| ATTCGTGTAGGAATGTGGAA+GGG | 0.678685 | 6:+71830682 | MsG0680033696.01.T01:CDS |
| GAGTTTGGTTGTGGACCGGT+TGG | 0.681067 | 6:+71830623 | MsG0680033696.01.T01:CDS |
| GTTAGCGTTGAAATATGAGG+TGG | 0.719947 | 6:+71830569 | MsG0680033696.01.T01:CDS |
| GTGGATGGAAGAAAGAACGG+CGG | 0.776465 | 6:-71830199 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATCTAAATCAAGAAAAA+CGG | - | Chr6:71830421-71830440 | None:intergenic | 20.0% |
| ! | ACTACAAAATCAAATTTCTC+CGG | - | Chr6:71830474-71830493 | None:intergenic | 25.0% |
| ! | GTTAATGTCTTTGATTGATT+TGG | - | Chr6:71830127-71830146 | None:intergenic | 25.0% |
| ! | TCTTGATTTAGATGAAACTT+TGG | + | Chr6:71830425-71830444 | MsG0680033696.01.T01:CDS | 25.0% |
| !!! | AGAAATTTGATTTTGTAGTC+CGG | + | Chr6:71830475-71830494 | MsG0680033696.01.T01:CDS | 25.0% |
| !!! | TGATTGTTTTGATGATATGA+GGG | + | Chr6:71830878-71830897 | MsG0680033696.01.T01:CDS | 25.0% |
| TTAATCAAAATCGCATTCTC+AGG | - | Chr6:71830795-71830814 | None:intergenic | 30.0% | |
| TTCCACCTTCAATATCTAAT+CGG | + | Chr6:71830391-71830410 | MsG0680033696.01.T01:CDS | 30.0% | |
| ! | GTTTTCCGATTAGATATTGA+AGG | - | Chr6:71830399-71830418 | None:intergenic | 30.0% |
| !!! | AAATTGAGAGGCTTTTTTGA+TGG | + | Chr6:71830852-71830871 | MsG0680033696.01.T01:CDS | 30.0% |
| !!! | AATTGAGAGGCTTTTTTGAT+GGG | + | Chr6:71830853-71830872 | MsG0680033696.01.T01:CDS | 30.0% |
| !!! | GTGATTGTTTTGATGATATG+AGG | + | Chr6:71830877-71830896 | MsG0680033696.01.T01:CDS | 30.0% |
| ACAAAATCAAATTTCTCCGG+CGG | - | Chr6:71830471-71830490 | None:intergenic | 35.0% | |
| TCAAAGCTTCTCACAAAACT+GGG | + | Chr6:71830231-71830250 | MsG0680033696.01.T01:CDS | 35.0% | |
| TCACAAGCATCATCAACAAA+AGG | - | Chr6:71830819-71830838 | None:intergenic | 35.0% | |
| TTCAAAGCTTCTCACAAAAC+TGG | + | Chr6:71830230-71830249 | MsG0680033696.01.T01:CDS | 35.0% | |
| TTCAACACGTAGAAATCCAT+CGG | - | Chr6:71830519-71830538 | None:intergenic | 35.0% | |
| TTCCGATTAGATATTGAAGG+TGG | - | Chr6:71830396-71830415 | None:intergenic | 35.0% | |
| ! | AAAAAGCAGGGTTTTGCAAA+CGG | - | Chr6:71830346-71830365 | None:intergenic | 35.0% |
| !! | ATATGAGGTGGTGGTTTTTA+CGG | + | Chr6:71830581-71830600 | MsG0680033696.01.T01:CDS | 35.0% |
| !! | GTGAAAGATTTGGGTTTTGT+GGG | + | Chr6:71830711-71830730 | MsG0680033696.01.T01:CDS | 35.0% |
| !! | TATTTCGCATCGGCTTTATA+GGG | + | Chr6:71830659-71830678 | MsG0680033696.01.T01:CDS | 35.0% |
| !! | TGTGAAAGATTTGGGTTTTG+TGG | + | Chr6:71830710-71830729 | MsG0680033696.01.T01:CDS | 35.0% |
| !! | TTATTTCGCATCGGCTTTAT+AGG | + | Chr6:71830658-71830677 | MsG0680033696.01.T01:CDS | 35.0% |
| !! | TTGTGAGAAGCTTTGAAATG+CGG | - | Chr6:71830227-71830246 | None:intergenic | 35.0% |
| AGGGAAGCTTGTGAAAGATT+TGG | + | Chr6:71830701-71830720 | MsG0680033696.01.T01:CDS | 40.0% | |
| ATTCGTGTAGGAATGTGGAA+GGG | + | Chr6:71830682-71830701 | MsG0680033696.01.T01:CDS | 40.0% | |
| CTCGTCTCAGTTCTTCAAAT+CGG | + | Chr6:71830259-71830278 | MsG0680033696.01.T01:CDS | 40.0% | |
| GACGCTATCTTCAAAAAGCA+GGG | - | Chr6:71830358-71830377 | None:intergenic | 40.0% | |
| GGGAAGCTTGTGAAAGATTT+GGG | + | Chr6:71830702-71830721 | MsG0680033696.01.T01:CDS | 40.0% | |
| TCCAACAATTCATCAATCCC+CGG | - | Chr6:71830546-71830565 | None:intergenic | 40.0% | |
| TCGTGTTCAGATCTGATCAA+AGG | + | Chr6:71830939-71830958 | MsG0680033696.01.T01:CDS | 40.0% | |
| ! | AGCGTTAGCGTTGAAATATG+AGG | + | Chr6:71830566-71830585 | MsG0680033696.01.T01:CDS | 40.0% |
| ! | GTTAGCGTTGAAATATGAGG+TGG | + | Chr6:71830569-71830588 | MsG0680033696.01.T01:CDS | 40.0% |
| !! | AAGATTTGGGTTTTGTGGGA+AGG | + | Chr6:71830715-71830734 | MsG0680033696.01.T01:CDS | 40.0% |
| !! | AGATTTGGGTTTTGTGGGAA+GGG | + | Chr6:71830716-71830735 | MsG0680033696.01.T01:CDS | 40.0% |
| !! | ATTTGATTTTGTAGTCCGGC+CGG | + | Chr6:71830479-71830498 | MsG0680033696.01.T01:CDS | 40.0% |
| !! | GGTTGATTCGAAAACGAAAC+TGG | - | Chr6:71830774-71830793 | None:intergenic | 40.0% |
| AAATCAAATTTCTCCGGCGG+TGG | - | Chr6:71830468-71830487 | None:intergenic | 45.0% | |
| AAGACATTAACCGTCGTCGT+TGG | + | Chr6:71830136-71830155 | MsG0680033696.01.T01:CDS | 45.0% | |
| ACCGGGGATTGATGAATTGT+TGG | + | Chr6:71830542-71830561 | MsG0680033696.01.T01:CDS | 45.0% | |
| ATGCTTGTGATCGTGAGCTT+TGG | + | Chr6:71830829-71830848 | MsG0680033696.01.T01:CDS | 45.0% | |
| CGACGCTATCTTCAAAAAGC+AGG | - | Chr6:71830359-71830378 | None:intergenic | 45.0% | |
| GATGCGAAATAAACCCGTTC+CGG | - | Chr6:71830650-71830669 | None:intergenic | 45.0% | |
| GATTCGTGTAGGAATGTGGA+AGG | + | Chr6:71830681-71830700 | MsG0680033696.01.T01:CDS | 45.0% | |
| TAGGGATTCGTGTAGGAATG+TGG | + | Chr6:71830677-71830696 | MsG0680033696.01.T01:CDS | 45.0% | |
| TGTGGGAAGGGATTTGAAGA+AGG | + | Chr6:71830728-71830747 | MsG0680033696.01.T01:CDS | 45.0% | |
| TTCAAAAACTTCACCACCGC+CGG | + | Chr6:71830452-71830471 | MsG0680033696.01.T01:CDS | 45.0% | |
| TTTCTACGTGTTGAAGCGAC+CGG | + | Chr6:71830524-71830543 | MsG0680033696.01.T01:CDS | 45.0% | |
| ! | AGCGTTGAAATATGAGGTGG+TGG | + | Chr6:71830572-71830591 | MsG0680033696.01.T01:CDS | 45.0% |
| ! | ATCGGTTCACCATCAATCAC+CGG | - | Chr6:71830501-71830520 | None:intergenic | 45.0% |
| ! | GCTTAAGGAGTATGCGAGTT+TGG | + | Chr6:71830608-71830627 | MsG0680033696.01.T01:CDS | 45.0% |
| ! | GGAACGGGTTTATTTCGCAT+CGG | + | Chr6:71830649-71830668 | MsG0680033696.01.T01:CDS | 45.0% |
| ! | GGCTTTATAGGGATTCGTGT+AGG | + | Chr6:71830670-71830689 | MsG0680033696.01.T01:CDS | 45.0% |
| !! | CGTGAGCTTTGGAAATTGAG+AGG | + | Chr6:71830840-71830859 | MsG0680033696.01.T01:CDS | 45.0% |
| !! | TGAGAAGCTTTGAAATGCGG+CGG | - | Chr6:71830224-71830243 | None:intergenic | 45.0% |
| ATGCGAGTTTGGTTGTGGAC+CGG | + | Chr6:71830619-71830638 | MsG0680033696.01.T01:CDS | 50.0% | |
| GCGGTGGATGGAAGAAAGAA+CGG | - | Chr6:71830205-71830224 | None:intergenic | 50.0% | |
| GGAGTATGCGAGTTTGGTTG+TGG | + | Chr6:71830614-71830633 | MsG0680033696.01.T01:CDS | 50.0% | |
| GTGGATGGAAGAAAGAACGG+CGG | - | Chr6:71830202-71830221 | None:intergenic | 50.0% | |
| TCCGATAAAGAACGTCGTCG+CGG | + | Chr6:71830170-71830189 | MsG0680033696.01.T01:CDS | 50.0% | |
| TTCTACGTGTTGAAGCGACC+GGG | + | Chr6:71830525-71830544 | MsG0680033696.01.T01:CDS | 50.0% | |
| ! | GATCTGATCAAAGGCGTGTC+TGG | + | Chr6:71830948-71830967 | MsG0680033696.01.T01:CDS | 50.0% |
| !! | GGTGATTGATGGTGAACCGA+TGG | + | Chr6:71830500-71830519 | MsG0680033696.01.T01:CDS | 50.0% |
| !! | TGAGGTGGTGGTTTTTACGG+CGG | + | Chr6:71830584-71830603 | MsG0680033696.01.T01:CDS | 50.0% |
| !! | TTTTTCGACGCCAACGACGA+CGG | - | Chr6:71830149-71830168 | None:intergenic | 50.0% |
| GAGTTTGGTTGTGGACCGGT+TGG | + | Chr6:71830623-71830642 | MsG0680033696.01.T01:CDS | 55.0% | |
| GATGGAAGAAAGAACGGCGG+AGG | - | Chr6:71830199-71830218 | None:intergenic | 55.0% | |
| GCCGCGACGACGTTCTTTAT+CGG | - | Chr6:71830174-71830193 | None:intergenic | 55.0% | |
| GTTCACCATCAATCACCGGC+CGG | - | Chr6:71830497-71830516 | None:intergenic | 55.0% | |
| TAAACCCGTTCCGGTCCAAC+CGG | - | Chr6:71830641-71830660 | None:intergenic | 55.0% | |
| TCTACGTGTTGAAGCGACCG+GGG | + | Chr6:71830526-71830545 | MsG0680033696.01.T01:CDS | 55.0% | |
| ! | GGTTTTTACGGCGGCGCTTA+AGG | + | Chr6:71830593-71830612 | MsG0680033696.01.T01:CDS | 55.0% |
| !! | CTTTGAAATGCGGCGGTGGA+TGG | - | Chr6:71830217-71830236 | None:intergenic | 55.0% |
| !! | GAAGCTTTGAAATGCGGCGG+TGG | - | Chr6:71830221-71830240 | None:intergenic | 55.0% |
| GTAGTCCGGCCGGTGATTGA+TGG | + | Chr6:71830489-71830508 | MsG0680033696.01.T01:CDS | 60.0% | |
| TGGTTGTGGACCGGTTGGAC+CGG | + | Chr6:71830628-71830647 | MsG0680033696.01.T01:CDS | 60.0% | |
| GTGGACCGGTTGGACCGGAA+CGG | + | Chr6:71830633-71830652 | MsG0680033696.01.T01:CDS | 65.0% | |
| TGGACCGGTTGGACCGGAAC+GGG | + | Chr6:71830634-71830653 | MsG0680033696.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 71830093 | 71830977 | 71830093 | ID=MsG0680033696.01;Name=MsG0680033696.01 |
| Chr6 | mRNA | 71830093 | 71830977 | 71830093 | ID=MsG0680033696.01.T01;Parent=MsG0680033696.01;Name=MsG0680033696.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|294 |
| Chr6 | exon | 71830093 | 71830977 | 71830093 | ID=MsG0680033696.01.T01:exon:2446;Parent=MsG0680033696.01.T01 |
| Chr6 | CDS | 71830093 | 71830977 | 71830093 | ID=MsG0680033696.01.T01:cds;Parent=MsG0680033696.01.T01 |
| Gene Sequence |
| Protein sequence |
