AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1375780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1375780 MtrunA17_Chr4g0068871 96.677 632 7 2 1 618 1 632 0.0 1264
Msa1375780 MtrunA17_Chr4g0043091 25.478 471 260 15 132 522 46 505 1.18e-32 132
Msa1375780 MtrunA17_Chr4g0042171 28.009 432 225 16 168 524 86 506 2.64e-31 128
Msa1375780 MtrunA17_Chr4g0033311 27.913 412 218 13 169 510 103 505 4.68e-31 127
Msa1375780 MtrunA17_Chr4g0033201 28.058 417 227 14 169 518 100 510 3.11e-30 124
Msa1375780 MtrunA17_Chr4g0074551 26.457 446 241 16 169 538 113 547 2.94e-29 122
Msa1375780 MtrunA17_Chr3g0088441 25.870 460 247 16 133 510 57 504 6.00e-29 121
Msa1375780 MtrunA17_Chr4g0033321 25.882 425 230 12 169 520 97 509 1.01e-28 120
Msa1375780 MtrunA17_Chr4g0033191 27.273 418 229 13 169 518 107 517 1.85e-28 119
Msa1375780 MtrunA17_Chr4g0033401 26.024 415 222 12 169 510 98 500 2.95e-28 119
Msa1375780 MtrunA17_Chr2g0317841 25.641 429 239 15 169 529 95 511 5.91e-28 118
Msa1375780 MtrunA17_Chr3g0087261 25.647 425 245 10 162 522 94 511 1.03e-27 117
Msa1375780 MtrunA17_Chr4g0006131 25.874 429 215 13 169 523 105 504 1.05e-27 117
Msa1375780 MtrunA17_Chr4g0010501 25.743 404 231 12 169 510 88 484 1.14e-27 117
Msa1375780 MtrunA17_Chr6g0482071 26.230 427 240 12 169 527 101 520 1.30e-27 117
Msa1375780 MtrunA17_Chr2g0329201 25.980 408 221 15 169 505 95 492 1.48e-27 116
Msa1375780 MtrunA17_Chr4g0033331 26.392 413 223 13 169 510 103 505 1.51e-27 117
Msa1375780 MtrunA17_Chr6g0482131 26.406 409 228 14 169 510 100 502 1.57e-27 117
Msa1375780 MtrunA17_Chr4g0006111 26.291 426 208 14 169 518 128 523 1.87e-27 116
Msa1375780 MtrunA17_Chr4g0033231 27.157 394 228 13 169 514 105 487 1.91e-27 116
Msa1375780 MtrunA17_Chr3g0087271 28.000 425 235 13 162 522 95 512 2.45e-27 116
Msa1375780 MtrunA17_Chr2g0329191 26.139 417 234 14 169 518 98 507 3.51e-27 115
Msa1375780 MtrunA17_Chr2g0288071 25.882 425 235 12 169 523 131 545 4.67e-27 115
Msa1375780 MtrunA17_Chr4g0074561 26.168 428 234 15 169 524 99 516 5.11e-27 115
Msa1375780 MtrunA17_Chr2g0301231 27.229 415 206 15 174 518 2 390 6.78e-27 113
Msa1375780 MtrunA17_Chr3g0090131 26.764 411 234 11 169 521 84 485 2.82e-26 112
Msa1375780 MtrunA17_Chr4g0033341 26.450 431 235 13 155 510 110 533 3.27e-26 113
Msa1375780 MtrunA17_Chr4g0033271 26.379 417 234 14 169 518 99 509 5.27e-26 112
Msa1375780 MtrunA17_Chr4g0033261 27.750 400 218 15 169 514 105 487 7.99e-26 111
Msa1375780 MtrunA17_Chr7g0234131 26.777 422 226 13 169 523 132 537 8.67e-26 111
Msa1375780 MtrunA17_Chr7g0234111 27.007 411 220 15 174 519 137 532 1.13e-25 111
Msa1375780 MtrunA17_Chr7g0234091 25.708 424 243 13 157 519 120 532 1.39e-25 111
Msa1375780 MtrunA17_Chr2g0317821 25.754 431 236 15 169 529 95 511 1.89e-25 110
Msa1375780 MtrunA17_Chr2g0288021 24.292 424 241 11 169 522 98 511 2.32e-25 110
Msa1375780 MtrunA17_Chr3g0090111 25.325 462 255 15 133 521 38 482 3.30e-25 109
Msa1375780 MtrunA17_Chr6g0482081 25.362 414 227 14 169 510 100 503 7.86e-23 102
Msa1375780 MtrunA17_Chr2g0329321 23.990 421 213 13 169 518 102 486 7.18e-22 99.4
Msa1375780 MtrunA17_Chr1g0195611 26.316 399 230 12 169 510 88 479 8.45e-21 96.3
Msa1375780 MtrunA17_Chr6g0482951 24.471 425 246 15 161 522 102 514 5.17e-20 94.0
Msa1375780 MtrunA17_Chr5g0430451 23.131 428 217 14 169 518 103 496 3.13e-19 91.3
Msa1375780 MtrunA17_Chr5g0428831 24.265 408 244 10 169 518 88 488 2.27e-18 88.6
Msa1375780 MtrunA17_Chr5g0418871 30.534 131 85 2 169 298 46 171 1.62e-14 75.1
Msa1375780 MtrunA17_Chr3g0087201 24.299 321 169 12 256 510 22 334 1.98e-14 75.1
Msa1375780 MtrunA17_Chr1g0195641 29.050 179 117 4 169 342 88 261 3.88e-14 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1375780 AT3G06510.1 64.039 609 183 4 4 597 1 588 0.0 823
Msa1375780 AT3G06510.2 60.653 643 183 5 4 597 1 622 0.0 808
Msa1375780 AT3G60140.1 26.834 477 261 18 145 547 68 530 9.05e-32 130
Msa1375780 AT3G60120.1 26.606 436 239 12 155 518 63 489 2.34e-31 129
Msa1375780 AT1G26560.1 25.219 456 247 15 148 520 64 508 2.66e-31 128
Msa1375780 AT3G60130.3 28.431 408 222 14 169 518 42 437 3.52e-31 127
Msa1375780 AT3G60130.2 28.162 419 220 14 169 518 42 448 7.01e-31 126
Msa1375780 AT3G60130.1 28.162 419 220 14 169 518 94 500 7.12e-31 127
Msa1375780 AT5G44640.1 26.683 416 238 10 169 522 95 505 3.11e-30 125
Msa1375780 AT2G44470.3 27.477 444 234 17 152 519 75 506 4.26e-30 125
Msa1375780 AT2G44490.1 26.202 416 224 12 169 510 78 484 2.97e-29 122
Msa1375780 AT2G25630.1 26.434 401 241 10 169 522 94 487 4.18e-29 121
Msa1375780 AT5G42260.1 26.961 408 231 10 169 514 95 497 4.59e-29 121
Msa1375780 AT2G44450.1 26.442 416 238 12 169 522 95 504 1.96e-28 119
Msa1375780 AT1G66270.1 27.460 437 239 15 155 521 85 513 2.88e-28 119
Msa1375780 AT2G32860.2 24.726 457 253 17 147 520 125 573 3.40e-28 120
Msa1375780 AT2G32860.1 25.000 456 252 16 147 520 125 572 3.57e-28 120
Msa1375780 AT3G09260.1 26.366 421 237 14 169 521 98 513 6.23e-28 118
Msa1375780 AT1G75940.1 24.236 458 252 12 144 521 78 520 6.85e-28 118
Msa1375780 AT1G66280.1 28.132 423 226 16 169 521 99 513 8.99e-28 118
Msa1375780 AT3G21370.1 24.449 454 258 14 142 521 72 514 1.35e-27 117
Msa1375780 AT5G36890.1 25.828 453 261 13 133 518 35 479 2.04e-27 116
Msa1375780 AT5G36890.2 25.828 453 261 13 133 518 35 479 2.52e-27 116
Msa1375780 AT2G44460.1 26.824 425 224 16 169 518 92 504 4.97e-27 116
Msa1375780 AT4G21760.2 24.645 422 248 12 169 527 117 531 8.70e-27 115
Msa1375780 AT4G21760.1 24.757 412 250 12 169 527 117 521 2.56e-26 114
Msa1375780 AT1G52400.3 24.762 420 240 11 169 518 102 515 5.32e-26 112
Msa1375780 AT1G52400.1 24.762 420 240 11 169 518 102 515 5.32e-26 112
Msa1375780 AT1G66270.2 27.231 437 238 16 155 521 85 511 1.01e-25 111
Msa1375780 AT5G24550.1 24.711 433 251 14 152 514 78 505 2.18e-25 110
Msa1375780 AT5G54570.1 25.708 424 231 14 168 518 93 505 8.13e-25 109
Msa1375780 AT5G28510.1 23.191 470 275 14 133 521 58 522 8.33e-25 108
Msa1375780 AT2G44480.2 24.634 410 234 11 174 514 2 405 4.21e-24 105
Msa1375780 AT5G54570.2 25.837 418 226 14 174 518 2 408 4.61e-24 105
Msa1375780 AT2G44480.1 24.634 410 234 11 174 514 104 507 4.80e-24 106
Msa1375780 AT2G44480.3 24.634 410 234 11 174 514 135 538 5.35e-24 106
Msa1375780 AT5G24540.1 24.667 450 244 15 141 505 57 496 7.69e-24 106
Msa1375780 AT3G03640.1 24.590 427 247 16 162 518 91 512 1.03e-23 105
Msa1375780 AT1G61810.1 25.917 436 236 18 169 530 97 519 1.32e-23 105
Msa1375780 AT1G61820.1 26.389 432 221 16 177 529 102 515 1.36e-23 105
Msa1375780 AT1G61810.5 26.168 428 229 18 177 530 5 419 1.41e-23 104
Msa1375780 AT1G61810.3 25.054 459 251 19 169 546 97 543 2.26e-22 101
Msa1375780 AT1G51470.1 24.879 414 239 11 169 519 106 510 3.43e-22 100
Msa1375780 AT1G47600.2 24.460 417 236 12 169 519 106 509 7.18e-22 100
Msa1375780 AT1G47600.1 24.402 418 236 12 169 519 106 510 1.08e-21 99.4
Msa1375780 AT1G02850.1 27.532 385 231 14 169 518 87 458 3.73e-21 97.4
Msa1375780 AT1G02850.2 27.251 411 226 16 169 518 87 485 6.61e-20 93.6
Msa1375780 AT3G18080.1 24.519 416 238 14 169 518 102 507 6.76e-20 94.0
Msa1375780 AT3G18070.1 22.947 414 245 13 169 518 93 496 7.45e-20 93.6
Msa1375780 AT3G18070.3 22.947 414 239 13 169 518 93 490 6.49e-19 90.5
Msa1375780 AT1G02850.5 25.806 434 226 16 169 518 87 508 1.08e-18 90.1
Msa1375780 AT4G27820.1 23.434 431 264 12 169 540 82 505 1.09e-18 90.1
Msa1375780 AT4G22100.1 24.694 409 242 12 169 518 81 482 1.99e-18 89.4
Msa1375780 AT3G62750.1 23.810 378 233 10 169 498 82 452 3.96e-18 88.2
Msa1375780 AT3G62750.2 23.810 378 233 10 169 498 108 478 4.60e-18 88.2
Msa1375780 AT1G45191.2 24.645 422 237 15 169 524 88 494 4.61e-18 88.2
Msa1375780 AT4G27830.1 24.750 400 235 14 169 510 85 476 9.38e-18 87.0
Msa1375780 AT2G44450.2 25.562 356 200 11 229 522 1 353 1.14e-17 85.5
Msa1375780 AT4G27820.2 23.404 423 258 12 177 540 5 420 1.17e-17 86.3
Msa1375780 AT4G27820.3 23.404 423 258 12 177 540 5 420 1.17e-17 86.3
Msa1375780 AT2G44460.2 26.158 367 187 15 227 518 1 358 1.32e-17 86.3
Msa1375780 AT1G45191.4 24.265 408 250 15 169 524 88 488 1.49e-17 86.7
Msa1375780 AT1G02850.4 25.747 435 226 17 169 518 87 509 2.80e-17 85.9
Msa1375780 AT1G45191.6 23.684 418 251 15 169 524 88 499 3.54e-17 85.5
Msa1375780 AT1G45191.1 23.684 418 251 15 169 524 100 511 4.64e-17 85.1
Msa1375780 AT1G61820.3 25.840 387 194 15 222 529 4 376 7.66e-17 83.2
Msa1375780 AT1G60090.2 22.947 414 241 13 169 518 83 482 1.47e-15 80.1
Msa1375780 AT3G60140.2 25.698 358 191 15 145 440 68 412 5.25e-15 78.2
Msa1375780 AT3G18070.2 23.404 329 186 10 253 518 94 419 7.66e-15 77.4
Msa1375780 AT2G44470.1 24.422 389 207 16 152 465 75 451 1.93e-14 76.6
Msa1375780 AT1G60090.1 22.276 413 252 14 169 518 83 489 7.40e-14 75.1
Msa1375780 AT5G24540.2 28.125 160 101 4 141 289 57 213 8.22e-14 74.3
Msa1375780 AT2G44480.4 27.222 180 125 4 174 350 135 311 9.53e-14 73.9
Msa1375780 AT1G52400.2 22.466 365 208 10 169 464 102 460 2.41e-13 73.2
Msa1375780 AT5G54570.3 28.272 191 120 6 168 350 93 274 6.88e-13 71.6
Msa1375780 AT3G62750.4 23.209 349 213 10 169 469 108 449 6.94e-13 71.6
Msa1375780 AT3G62750.7 31.126 151 83 4 169 304 82 226 7.15e-13 70.9
Msa1375780 AT3G62750.8 31.126 151 83 4 169 304 82 226 7.15e-13 70.9
Msa1375780 AT2G44470.2 25.869 259 142 10 169 386 92 341 1.26e-12 70.5
Msa1375780 AT3G62750.3 31.126 151 83 4 169 304 108 252 1.35e-12 70.5
Msa1375780 AT1G02850.3 31.452 124 79 2 169 291 87 205 4.18e-12 68.9
Msa1375780 AT1G45191.3 29.365 126 83 2 169 293 88 208 5.06e-12 68.6
Msa1375780 AT1G45191.5 29.365 126 83 2 169 293 88 208 5.26e-12 68.6
Msa1375780 AT3G18070.7 23.226 310 172 10 272 518 1 307 1.19e-11 66.6

Find 182 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGACTTACAGATTCTTTA+AGG 0.139827 tig0019745:-66384 None:intergenic
CCTTTCATTATTGCTGAAAA+TGG 0.160067 tig0019745:+67792 Msa1375780:CDS
ATATAAGTATTGCTGTTAAT+TGG 0.180457 tig0019745:-69711 None:intergenic
TCTGGACTATTTCTGATAAC+TGG 0.226760 tig0019745:+68010 Msa1375780:CDS
CTGTGCTTGGTTACCTCTTC+TGG 0.248895 tig0019745:+67992 Msa1375780:CDS
CGCCAATCTCTTTCTATATA+AGG 0.257777 tig0019745:-69105 None:intergenic
TTCAACGATTCTCCCTAAAA+AGG 0.257864 tig0019745:+69190 Msa1375780:CDS
TTAGATGCTTGTATCTTTCA+TGG 0.258804 tig0019745:-67764 None:intergenic
TCCTGATACAGAACTAAAAT+TGG 0.270840 tig0019745:+66285 Msa1375780:CDS
GGGAGGAGAGATTAAGGTTT+TGG 0.271168 tig0019745:+66257 Msa1375780:intron
TGTACATCAGGAAGCGATTT+CGG 0.284236 tig0019745:+67650 Msa1375780:intron
GATTCTTTAAGGCTGTTTAC+TGG 0.292666 tig0019745:-66373 None:intergenic
CCCTCGTTGCGCAGATGATA+TGG 0.300230 tig0019745:-65353 None:intergenic
GTACATCAGGAAGCGATTTC+GGG 0.300370 tig0019745:+67651 Msa1375780:intron
TGTATGCTTACTTACTGTTC+TGG 0.302328 tig0019745:+67068 Msa1375780:CDS
CTAAAATTGGCCAAGGATAC+TGG 0.313762 tig0019745:+66298 Msa1375780:CDS
GAAACAAGTAACACTCCTTT+TGG 0.322285 tig0019745:-69675 None:intergenic
CATCTTCAATTCGGACTCAT+TGG 0.327888 tig0019745:-69766 None:intergenic
TATCAGATTTAGTAGACTAT+TGG 0.332759 tig0019745:+67018 Msa1375780:CDS
TTGTCCACAGCCCGATAAAA+TGG 0.337862 tig0019745:-68307 None:intergenic
GAATAATGAATCTTGAGAAT+TGG 0.341853 tig0019745:-69170 None:intergenic
GATGGATATGGTCCCAAGTT+TGG 0.341947 tig0019745:+68042 Msa1375780:CDS
TTTATAGGCGTTAACTATTA+CGG 0.351253 tig0019745:+67553 Msa1375780:CDS
TTCTATATAAGGCCGCTGTA+TGG 0.354083 tig0019745:-69094 None:intergenic
AAAGACAGTGGATTATTTCA+TGG 0.355262 tig0019745:+66727 Msa1375780:CDS
GCTATAAGTGGATTATCAAT+AGG 0.360657 tig0019745:+66615 Msa1375780:CDS
ATCAATAGGGTTCGATCATA+TGG 0.366808 tig0019745:+66629 Msa1375780:CDS
CGGCGAGTTTAGTGGCAGTT+AGG 0.376526 tig0019745:-64629 None:intergenic
ATCTGCGCAACGAGGGCTTA+AGG 0.376736 tig0019745:+65360 Msa1375780:CDS
TCCGCTACAGAGATTCATTC+TGG 0.381756 tig0019745:+69437 Msa1375780:intron
GTAGCAGCCTCTAGCATATC+AGG 0.383932 tig0019745:-67110 None:intergenic
ATAGAAAGAGATTGGCGGTT+TGG 0.384777 tig0019745:+69111 Msa1375780:CDS
ATCAGATTTAGTAGACTATT+GGG 0.388367 tig0019745:+67019 Msa1375780:CDS
TCGTAGTTTCCAGAACTTAA+CGG 0.389659 tig0019745:+64538 Msa1375780:five_prime_UTR
AATGATGAGTACAGTGAATC+TGG 0.391568 tig0019745:+67696 Msa1375780:CDS
TTATGCCAAGCAGTTACATT+AGG 0.392142 tig0019745:-65481 None:intergenic
TTGGATATTTCATCGATGAA+TGG 0.395990 tig0019745:-67520 None:intergenic
TACTAGAACGCTGAGTCATT+TGG 0.403300 tig0019745:-69340 None:intergenic
AAATGGAAGAGAATTGCATT+TGG 0.403820 tig0019745:+69479 Msa1375780:three_prime_UTR
TGGGAGTGGGCTGATGGATA+TGG 0.403938 tig0019745:+68030 Msa1375780:CDS
TACTGTTCTGGAACCTGGCC+TGG 0.406059 tig0019745:+67080 Msa1375780:CDS
TCATCACTCACTTCCACCCT+GGG 0.420608 tig0019745:+66676 Msa1375780:CDS
ATGGGCTCTGCCACTGCTGA+TGG 0.420767 tig0019745:+65316 Msa1375780:CDS
AAGGAGTGTTACTTGTTTCA+AGG 0.421826 tig0019745:+69679 Msa1375780:three_prime_UTR
AACTGCGACAAGTCCAAACT+TGG 0.422766 tig0019745:-68055 None:intergenic
TTCATCACTCACTTCCACCC+TGG 0.424450 tig0019745:+66675 Msa1375780:CDS
AATGGAAGAGAATTGCATTT+GGG 0.424548 tig0019745:+69480 Msa1375780:three_prime_UTR
TTACTTACTGTTCTGGAACC+TGG 0.428685 tig0019745:+67075 Msa1375780:CDS
CTACAGGGTGTGCCTGTGCT+TGG 0.432531 tig0019745:+67979 Msa1375780:intron
GAGAAATACATGGAAGTAGA+TGG 0.433306 tig0019745:+65433 Msa1375780:CDS
GCAGAAAGTAGATGCTTTGA+TGG 0.437544 tig0019745:+65297 Msa1375780:CDS
GGCTCTGCCACTGCTGATGG+TGG 0.438257 tig0019745:+65319 Msa1375780:CDS
TCTGCGCAACGAGGGCTTAA+GGG 0.438340 tig0019745:+65361 Msa1375780:CDS
TCTGAACAATGCAGCAAAGC+TGG 0.438401 tig0019745:-69538 None:intergenic
CAAATATTCACCTGAGTTCG+TGG 0.439262 tig0019745:-67211 None:intergenic
GCTGAACAAGAGAGTGTTGC+CGG 0.439290 tig0019745:+65268 Msa1375780:CDS
ATATCCAATGCATGGCCTGC+TGG 0.439716 tig0019745:-67157 None:intergenic
AGAATTGGCTTAAGTAATCC+TGG 0.442485 tig0019745:-69155 None:intergenic
ATTACCGGTAATGTTGAAAT+CGG 0.448793 tig0019745:-64763 None:intergenic
ACACTCATACCGTTAAGTTC+TGG 0.450502 tig0019745:-64547 None:intergenic
TGGGACTGCATTATATATCA+AGG 0.451628 tig0019745:+69499 Msa1375780:three_prime_UTR
TGATATTGCTGCCGTTTCAC+TGG 0.452144 tig0019745:+67477 Msa1375780:CDS
ACCTCCATAATCACCGGCCC+AGG 0.458461 tig0019745:-66693 None:intergenic
GGGTAACAAGAAGTCTCTTA+AGG 0.459175 tig0019745:+65381 Msa1375780:CDS
CAGGAAGCGATTTCGGGTGC+TGG 0.460871 tig0019745:+67657 Msa1375780:intron
TTAGGTCAACTATGCTGCAT+TGG 0.461249 tig0019745:+66589 Msa1375780:intron
GTATTACTTTGAGTAGTAAG+AGG 0.462422 tig0019745:-69293 None:intergenic
AGGACAGGCTTGATGATGCT+TGG 0.463999 tig0019745:+65236 Msa1375780:CDS
TGGATATTTCATCGATGAAT+GGG 0.467254 tig0019745:-67519 None:intergenic
AGTAAATGCTCCAAGAGATA+TGG 0.467848 tig0019745:-67846 None:intergenic
AACAGTAACACCAGTATCCT+TGG 0.478658 tig0019745:-66308 None:intergenic
GAGATTTGATAAGTTATCAA+TGG 0.479234 tig0019745:-69264 None:intergenic
AACTCATCAAATCAAATAGT+TGG 0.480032 tig0019745:+67412 Msa1375780:CDS
TCTATATAAGGCCGCTGTAT+GGG 0.481662 tig0019745:-69093 None:intergenic
CTCGCCGATTTCAACATTAC+CGG 0.484377 tig0019745:+64759 Msa1375780:CDS
CAAGTGAGAGCTTACGGATG+TGG 0.488260 tig0019745:-65508 None:intergenic
GGCCTTATATAGAAAGAGAT+TGG 0.490186 tig0019745:+69103 Msa1375780:CDS
GAAGTCTCTTAAGGTAGCTA+TGG 0.490346 tig0019745:+65390 Msa1375780:CDS
TCTTGTCTTCTTCTCTTTAG+CGG 0.491603 tig0019745:-68284 None:intergenic
GATCCGCCGACCATATCTCT+TGG 0.492133 tig0019745:+67836 Msa1375780:CDS
CTGGACTATTTCTGATAACT+GGG 0.492878 tig0019745:+68011 Msa1375780:CDS
CTATAAGTGGATTATCAATA+GGG 0.493867 tig0019745:+66616 Msa1375780:CDS
CACTCACTTCCACCCTGGGC+CGG 0.494939 tig0019745:+66680 Msa1375780:CDS
TAAAGCTCCGGCGAGTTTAG+TGG 0.495185 tig0019745:-64637 None:intergenic
ATCAGGATGTCCACCAGGCC+AGG 0.496467 tig0019745:-67093 None:intergenic
AACATGCGATATAAGCCATC+AGG 0.498179 tig0019745:-67732 None:intergenic
CATCGATAGGGGAAGTGAAA+CGG 0.498202 tig0019745:-64722 None:intergenic
TAATTAAATTATGTCTCACT+TGG 0.498480 tig0019745:-64337 None:intergenic
GCTACTTCCGCACTTCCTAC+AGG 0.498844 tig0019745:+67128 Msa1375780:CDS
TGTATTAATGATATGCCAAA+AGG 0.499253 tig0019745:+69660 Msa1375780:three_prime_UTR
TGATTATGGAGGTTGGAAGC+TGG 0.500135 tig0019745:+66703 Msa1375780:CDS
ATATCTAGAAATGAATGAAA+AGG 0.501587 tig0019745:+64391 Msa1375780:five_prime_UTR
GTTGAAATCGGCGAGAGTAT+CGG 0.506142 tig0019745:-64751 None:intergenic
TTAGAAAACAGATGGTAAGA+AGG 0.506880 tig0019745:-68111 None:intergenic
GATAACTGGGAGTGGGCTGA+TGG 0.509425 tig0019745:+68024 Msa1375780:CDS
TCCGTGCAAGATTATTTGCT+CGG 0.509949 tig0019745:-68080 None:intergenic
TTATGAGATGGATGACCTCC+AGG 0.512096 tig0019745:+69137 Msa1375780:CDS
TTTCTCAAATCCTCTGATCA+TGG 0.512160 tig0019745:-65416 None:intergenic
ATCATCGCGTGTAACTTTAC+CGG 0.512237 tig0019745:-68230 None:intergenic
CTGCATTGGAGCGCTATAAG+TGG 0.513111 tig0019745:+66603 Msa1375780:CDS
GGGTGCTGGCCTGAAGCTTG+TGG 0.519846 tig0019745:+67671 Msa1375780:CDS
TGAAACTATCGTCATGGTAG+TGG 0.527279 tig0019745:-64601 None:intergenic
ATCTACTTTCTGCTCAGCAC+CGG 0.527534 tig0019745:-65287 None:intergenic
GCTCTGCCACTGCTGATGGT+GGG 0.527582 tig0019745:+65320 Msa1375780:CDS
ATACATGGAAGTAGATGGAC+AGG 0.527787 tig0019745:+65438 Msa1375780:CDS
TTTGTTGCGAAAACGAGAGA+AGG 0.531839 tig0019745:-64691 None:intergenic
CACCGGCACATGTTGAGGAC+AGG 0.532272 tig0019745:+65221 Msa1375780:CDS
TACATATGGATCTTCAGCAC+AGG 0.533400 tig0019745:+69402 Msa1375780:three_prime_UTR
GGGCCGGTGATTATGGAGGT+TGG 0.535413 tig0019745:+66696 Msa1375780:CDS
AGCCTGTCCTCAACATGTGC+CGG 0.537611 tig0019745:-65223 None:intergenic
TCTAGAAATGAATGAAAAGG+AGG 0.538209 tig0019745:+64394 Msa1375780:five_prime_UTR
GTATCGGAGGATTCATCGAT+AGG 0.538658 tig0019745:-64735 None:intergenic
GCGATGATCGTGATAACGCT+TGG 0.539634 tig0019745:+68245 Msa1375780:CDS
CAGAGGATTTGAGAAATACA+TGG 0.540066 tig0019745:+65423 Msa1375780:CDS
TGATTGCAGGTTGTAAGTAC+CGG 0.546506 tig0019745:+68211 Msa1375780:intron
TATCGGAGGATTCATCGATA+GGG 0.548818 tig0019745:-64734 None:intergenic
TATTATTATATTGTATAATG+CGG 0.556720 tig0019745:+69563 Msa1375780:three_prime_UTR
CGAGTTGATCATTCTTGTGA+GGG 0.561286 tig0019745:-69370 None:intergenic
GATATCTGTTGCACACTCAA+AGG 0.564342 tig0019745:+67175 Msa1375780:CDS
AGAGAAGGAAAATGCATTGG+CGG 0.565039 tig0019745:-64676 None:intergenic
CTATTTCTGATAACTGGGAG+TGG 0.565300 tig0019745:+68016 Msa1375780:CDS
CAATGAATTAGCCAGTGAAA+CGG 0.566575 tig0019745:-67488 None:intergenic
AGCAATATCAAACAGACCAT+AGG 0.568096 tig0019745:-67464 None:intergenic
AGCATATCAGGATGTCCACC+AGG 0.569201 tig0019745:-67098 None:intergenic
ACATTCCTAATGTAACTGCT+TGG 0.569411 tig0019745:+65476 Msa1375780:CDS
TTCTGGAAACTACGAAGAAG+AGG 0.569890 tig0019745:-64530 None:intergenic
GACAGCACCGGCACATGTTG+AGG 0.574188 tig0019745:+65216 Msa1375780:intron
TATCAGAAATAGTCCAGAAG+AGG 0.574316 tig0019745:-68005 None:intergenic
AGGCTGTTTACTGGCTCATG+AGG 0.574448 tig0019745:-66364 None:intergenic
CTTATATAGAAAGAGATTGG+CGG 0.576039 tig0019745:+69106 Msa1375780:CDS
TAGAAAACAGATGGTAAGAA+GGG 0.578554 tig0019745:-68110 None:intergenic
CTAGAAATGAATGAAAAGGA+GGG 0.578721 tig0019745:+64395 Msa1375780:five_prime_UTR
TACAAACTTTAGAAAACAGA+TGG 0.582069 tig0019745:-68119 None:intergenic
CAGAAGAGGTAACCAAGCAC+AGG 0.582991 tig0019745:-67991 None:intergenic
GCAATATCAAACAGACCATA+GGG 0.584114 tig0019745:-67463 None:intergenic
GTCTCTTAAGGTAGCTATGG+AGG 0.585522 tig0019745:+65393 Msa1375780:CDS
AAGTAAGCATACAGAAGACA+TGG 0.587256 tig0019745:-67058 None:intergenic
ATGATTACATCCACGAACTC+AGG 0.587432 tig0019745:+67201 Msa1375780:CDS
TGCAACAGATATCCAATGCA+TGG 0.588834 tig0019745:-67165 None:intergenic
TACAGAACTAAAATTGGCCA+AGG 0.590023 tig0019745:+66291 Msa1375780:CDS
AGTGAGAGTGACTAAAGCTC+CGG 0.590174 tig0019745:-64649 None:intergenic
ACCGAGCAAATAATCTTGCA+CGG 0.590207 tig0019745:+68079 Msa1375780:CDS
TCAATGGCTAAGTTCAAAGC+GGG 0.590429 tig0019745:-69248 None:intergenic
TATTTCTGATAACTGGGAGT+GGG 0.592426 tig0019745:+68017 Msa1375780:CDS
ACGAGAGAAGGAAAATGCAT+TGG 0.595701 tig0019745:-64679 None:intergenic
CTTCCAACCTCCATAATCAC+CGG 0.604506 tig0019745:-66699 None:intergenic
TGTTCTGGAACCTGGCCTGG+TGG 0.605992 tig0019745:+67083 Msa1375780:CDS
ATCAATGGCTAAGTTCAAAG+CGG 0.608497 tig0019745:-69249 None:intergenic
CAGAAAGTAGATGCTTTGAT+GGG 0.609720 tig0019745:+65298 Msa1375780:CDS
CTCATCTCATCTCAGAACAG+TGG 0.611526 tig0019745:+64473 Msa1375780:five_prime_UTR
CACAAGAATGATCAACTCGA+TGG 0.612292 tig0019745:+69374 Msa1375780:three_prime_UTR
GCGGTTTGGTCATTATGAGA+TGG 0.613726 tig0019745:+69125 Msa1375780:CDS
ATCGTCATGGTAGTGGCGAG+TGG 0.614752 tig0019745:-64594 None:intergenic
TCGAGTTGATCATTCTTGTG+AGG 0.615622 tig0019745:-69371 None:intergenic
CCCTGGGCCGGTGATTATGG+AGG 0.616382 tig0019745:+66692 Msa1375780:CDS
ATCGGAGGATTCATCGATAG+GGG 0.619526 tig0019745:-64733 None:intergenic
GGACGTGGAGTATATCCTGA+TGG 0.620310 tig0019745:+67717 Msa1375780:CDS
ATGGAAGTAGATGGACAGGA+AGG 0.625915 tig0019745:+65442 Msa1375780:CDS
GAAGAGTGAAACTATCGTCA+TGG 0.627384 tig0019745:-64607 None:intergenic
CCATATCATCTGCGCAACGA+GGG 0.629741 tig0019745:+65353 Msa1375780:CDS
GCTATGGAGGCCATGATCAG+AGG 0.630260 tig0019745:+65406 Msa1375780:CDS
AACAGATGGTAAGAAGGGCG+AGG 0.630415 tig0019745:-68105 None:intergenic
TTGAGACCCACCATCAGCAG+TGG 0.633108 tig0019745:-65326 None:intergenic
CCTCCATAATCACCGGCCCA+GGG 0.633146 tig0019745:-66692 None:intergenic
GAAGAGGAGAAAGAGAAGAA+CGG 0.633614 tig0019745:-64514 None:intergenic
CTAACTGCCACTAAACTCGC+CGG 0.637113 tig0019745:+64630 Msa1375780:CDS
GCCATATCATCTGCGCAACG+AGG 0.637784 tig0019745:+65352 Msa1375780:CDS
TGTTTATGCTGCTATGATCG+AGG 0.638077 tig0019745:+67872 Msa1375780:CDS
AGTAAGCATACAGAAGACAT+GGG 0.649848 tig0019745:-67057 None:intergenic
AAATAACAGAAGAGAACACA+TGG 0.652388 tig0019745:+64424 Msa1375780:five_prime_UTR
GCCTGCTGGAAAACACCTGT+AGG 0.655259 tig0019745:-67143 None:intergenic
TGGACATCCTGATATGCTAG+AGG 0.661739 tig0019745:+67103 Msa1375780:CDS
ACTGCGACAAGTCCAAACTT+GGG 0.667272 tig0019745:-68054 None:intergenic
GAGTACAGTGAATCTGGACG+TGG 0.667884 tig0019745:+67702 Msa1375780:CDS
TTGGAAGCTGGAAAAGACAG+TGG 0.672743 tig0019745:+66715 Msa1375780:CDS
GAAAACACCTGTAGGAAGTG+CGG 0.675092 tig0019745:-67135 None:intergenic
GAAATCGGCGAGAGTATCGG+AGG 0.675982 tig0019745:-64748 None:intergenic
GCTCCAAGAGATATGGTCGG+CGG 0.699012 tig0019745:-67839 None:intergenic
AATGCTCCAAGAGATATGGT+CGG 0.704069 tig0019745:-67842 None:intergenic
GTAAGCATACAGAAGACATG+GGG 0.722281 tig0019745:-67056 None:intergenic
GACTTGATGAACCCATACAG+CGG 0.730478 tig0019745:+69082 Msa1375780:CDS
ATTGGCTTAAGTAATCCTGG+AGG 0.768810 tig0019745:-69152 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTAAATAAGGAATTAT+TGG - tig0019745:66086-66105 None:intergenic 10.0%
!! TATTATTATATTGTATAATG+CGG + tig0019745:69563-69582 Msa1375780:three_prime_UTR 10.0%
!!! TTCATTTCTAGATATTTTTT+TGG - tig0019745:64386-64405 None:intergenic 15.0%
!! GTCATTAATAAAATAGATTA+AGG + tig0019745:64877-64896 Msa1375780:intron 15.0%
!! AATAAATTTGTAACAAATCA+AGG + tig0019745:65737-65756 Msa1375780:intron 15.0%
!!! TAATATTTCCTTTGTAATTT+TGG + tig0019745:68167-68186 Msa1375780:intron 15.0%
!!! AATATTTCCTTTGTAATTTT+GGG + tig0019745:68168-68187 Msa1375780:intron 15.0%
!! TAATCCATTCTATTTATAAT+TGG - tig0019745:68590-68609 None:intergenic 15.0%
!!! ATGAATACTATATTTTTCTT+AGG + tig0019745:69002-69021 Msa1375780:intron 15.0%
!!! TGAATACTATATTTTTCTTA+GGG + tig0019745:69003-69022 Msa1375780:intron 15.0%
!!! ATTTTTTTGCTTATTGAAAA+TGG + tig0019745:69462-69481 Msa1375780:three_prime_UTR 15.0%
!! TAATTAAATTATGTCTCACT+TGG - tig0019745:64340-64359 None:intergenic 20.0%
!! ATATCTAGAAATGAATGAAA+AGG + tig0019745:64391-64410 Msa1375780:five_prime_UTR 20.0%
!! ATCATAATAGAGATTATTAC+CGG - tig0019745:64781-64800 None:intergenic 20.0%
!! CTCTATTATGATTCATTAAT+TGG + tig0019745:64789-64808 Msa1375780:intron 20.0%
!! TTATCATATAATGTCATCTT+TGG + tig0019745:64947-64966 Msa1375780:intron 20.0%
!! ATATGGTAGTTACAAATAAA+TGG + tig0019745:65689-65708 Msa1375780:intron 20.0%
!!! CAAGATATCATGAAATATTT+TGG - tig0019745:66052-66071 None:intergenic 20.0%
!!! TAAAGTTTGAGATAAAACTT+TGG - tig0019745:66501-66520 None:intergenic 20.0%
!! CATTCTATTTATAATTGGTT+CGG - tig0019745:68585-68604 None:intergenic 20.0%
!!! GAATACTATATTTTTCTTAG+GGG + tig0019745:69004-69023 Msa1375780:intron 20.0%
!!! AGATTTCTTTTTCCTTTTTA+GGG - tig0019745:69205-69224 None:intergenic 20.0%
!!! ATATAAGTATTGCTGTTAAT+TGG - tig0019745:69714-69733 None:intergenic 20.0%
!! TTTTTGCAGAAGAAGAAAAT+GGG + tig0019745:65176-65195 Msa1375780:intron 25.0%
! TGATTCTGATTGATTGTATT+AGG - tig0019745:65718-65737 None:intergenic 25.0%
! ATTCAACAACATATCACTTA+TGG - tig0019745:65889-65908 None:intergenic 25.0%
! TCTATCAGGCATAAATAAAT+TGG - tig0019745:65922-65941 None:intergenic 25.0%
!!! TGAAATATTTTGGATATGCT+AGG - tig0019745:66042-66061 None:intergenic 25.0%
! TAGCTTTCTTAAACTGAAAA+TGG + tig0019745:66124-66143 Msa1375780:intron 25.0%
!! AAAATTAATGCCTGATTTTC+AGG + tig0019745:66236-66255 Msa1375780:intron 25.0%
!! AAATTAATGCCTGATTTTCA+GGG + tig0019745:66237-66256 Msa1375780:intron 25.0%
!! TTTGACTTACAGATTCTTTA+AGG - tig0019745:66387-66406 None:intergenic 25.0%
! TAACTAATCATCATACAGAA+AGG - tig0019745:66416-66435 None:intergenic 25.0%
! CATAGTTTAGCATATATTAG+TGG + tig0019745:66446-66465 Msa1375780:intron 25.0%
!!! CTATAAGTGGATTATCAATA+GGG + tig0019745:66616-66635 Msa1375780:CDS 25.0%
!! ATTATTTCATGGATTTTACC+AGG + tig0019745:66738-66757 Msa1375780:CDS 25.0%
!!! CATCATGTTATCTAGTTTTA+TGG + tig0019745:66918-66937 Msa1375780:intron 25.0%
! TATCAGATTTAGTAGACTAT+TGG + tig0019745:67018-67037 Msa1375780:CDS 25.0%
! ATCAGATTTAGTAGACTATT+GGG + tig0019745:67019-67038 Msa1375780:CDS 25.0%
! AACTCATCAAATCAAATAGT+TGG + tig0019745:67412-67431 Msa1375780:CDS 25.0%
! TTTATAGGCGTTAACTATTA+CGG + tig0019745:67553-67572 Msa1375780:CDS 25.0%
!! CATTTTCAGCAATAATGAAA+GGG - tig0019745:67794-67813 None:intergenic 25.0%
!! TACAAACTTTAGAAAACAGA+TGG - tig0019745:68122-68141 None:intergenic 25.0%
!!! ATTTTGGGTGACATTTTTAA+TGG + tig0019745:68183-68202 Msa1375780:intron 25.0%
! AAAAATGGTTTAATGTTAGC+AGG + tig0019745:68328-68347 Msa1375780:CDS 25.0%
! CGAACCAATTATAAATAGAA+TGG + tig0019745:68583-68602 Msa1375780:intron 25.0%
! GCAACTTATAAAATTAAGGT+TGG - tig0019745:68622-68641 None:intergenic 25.0%
!! ACCTTAATTTTATAAGTTGC+AGG + tig0019745:68622-68641 Msa1375780:intron 25.0%
! ACCTGCAACTTATAAAATTA+AGG - tig0019745:68626-68645 None:intergenic 25.0%
!! AATTTTATAAGTTGCAGGTA+AGG + tig0019745:68627-68646 Msa1375780:intron 25.0%
!! GAGCAATATTCTAATTTTGT+AGG - tig0019745:68935-68954 None:intergenic 25.0%
! GAATAATGAATCTTGAGAAT+TGG - tig0019745:69173-69192 None:intergenic 25.0%
!! GAGATTTCTTTTTCCTTTTT+AGG - tig0019745:69206-69225 None:intergenic 25.0%
! AAGGAAAAAGAAATCTCAAA+AGG + tig0019745:69209-69228 Msa1375780:CDS 25.0%
! GAGATTTGATAAGTTATCAA+TGG - tig0019745:69267-69286 None:intergenic 25.0%
!! TTTTGGCATATCATTAATAC+AGG - tig0019745:69661-69680 None:intergenic 25.0%
! TGTATTAATGATATGCCAAA+AGG + tig0019745:69660-69679 Msa1375780:three_prime_UTR 25.0%
TCTAGAAATGAATGAAAAGG+AGG + tig0019745:64394-64413 Msa1375780:five_prime_UTR 30.0%
CTAGAAATGAATGAAAAGGA+GGG + tig0019745:64395-64414 Msa1375780:five_prime_UTR 30.0%
AAATAACAGAAGAGAACACA+TGG + tig0019745:64424-64443 Msa1375780:five_prime_UTR 30.0%
ATTACCGGTAATGTTGAAAT+CGG - tig0019745:64766-64785 None:intergenic 30.0%
AAATAGATTAAGGCTCTCTT+TGG + tig0019745:64887-64906 Msa1375780:intron 30.0%
TAATAAATAAGCTGCTATCC+TGG + tig0019745:65064-65083 Msa1375780:intron 30.0%
TTTCATAAGTTCTCCAAACA+TGG + tig0019745:65141-65160 Msa1375780:intron 30.0%
ACAAACAAATAAGCCATGTT+TGG - tig0019745:65157-65176 None:intergenic 30.0%
! GTTTTTGCAGAAGAAGAAAA+TGG + tig0019745:65175-65194 Msa1375780:intron 30.0%
!! GAAGAAAATGGGTTTTTCTT+TGG + tig0019745:65187-65206 Msa1375780:intron 30.0%
ACTTCAAAATCCAATGTTGA+CGG - tig0019745:65556-65575 None:intergenic 30.0%
!!! ACATTGGATTTTGAAGTGAA+AGG + tig0019745:65559-65578 Msa1375780:intron 30.0%
!!! CATTGGATTTTGAAGTGAAA+GGG + tig0019745:65560-65579 Msa1375780:intron 30.0%
!!! ATTGGATTTTGAAGTGAAAG+GGG + tig0019745:65561-65580 Msa1375780:intron 30.0%
GTAAGCTAATATTGTTGTCA+AGG + tig0019745:65600-65619 Msa1375780:intron 30.0%
TAGAATCTTCTGTAAAGTCT+TGG - tig0019745:65659-65678 None:intergenic 30.0%
TGTAACTACCATATCTTGTA+TGG - tig0019745:65683-65702 None:intergenic 30.0%
! TTTGGTTTCCATAATCAAGT+TGG - tig0019745:65813-65832 None:intergenic 30.0%
ATCGTATTTGAATTGCACTT+TGG + tig0019745:65961-65980 Msa1375780:intron 30.0%
TCCTGATACAGAACTAAAAT+TGG + tig0019745:66285-66304 Msa1375780:CDS 30.0%
! TGTATGATGATTAGTTATCG+TGG + tig0019745:66419-66438 Msa1375780:intron 30.0%
GTTTAGCATATATTAGTGGA+TGG + tig0019745:66450-66469 Msa1375780:intron 30.0%
ACTTATGTAAGCAATTCACT+TGG + tig0019745:66557-66576 Msa1375780:intron 30.0%
!! GCTATAAGTGGATTATCAAT+AGG + tig0019745:66615-66634 Msa1375780:CDS 30.0%
!! AAAGACAGTGGATTATTTCA+TGG + tig0019745:66727-66746 Msa1375780:CDS 30.0%
ATACAAACAAATGCCACTAA+AGG - tig0019745:66772-66791 None:intergenic 30.0%
TGGATATTTCATCGATGAAT+GGG - tig0019745:67522-67541 None:intergenic 30.0%
TTGGATATTTCATCGATGAA+TGG - tig0019745:67523-67542 None:intergenic 30.0%
CGATGAAATATCCAAAAAGA+TGG + tig0019745:67528-67547 Msa1375780:CDS 30.0%
! TCCAAAAAGATGGACTTTAT+AGG + tig0019745:67538-67557 Msa1375780:CDS 30.0%
TTAGATGCTTGTATCTTTCA+TGG - tig0019745:67767-67786 None:intergenic 30.0%
! CCATTTTCAGCAATAATGAA+AGG - tig0019745:67795-67814 None:intergenic 30.0%
CCTTTCATTATTGCTGAAAA+TGG + tig0019745:67792-67811 Msa1375780:CDS 30.0%
TAGAAAACAGATGGTAAGAA+GGG - tig0019745:68113-68132 None:intergenic 30.0%
TTAGAAAACAGATGGTAAGA+AGG - tig0019745:68114-68133 None:intergenic 30.0%
AATGTCACCCAAAATTACAA+AGG - tig0019745:68178-68197 None:intergenic 30.0%
! AGAAGACAAGACCATTTTAT+CGG + tig0019745:68296-68315 Msa1375780:CDS 30.0%
!! AATGCGTTTCTATTGATTTG+TGG + tig0019745:68390-68409 Msa1375780:intron 30.0%
!! ATGCGTTTCTATTGATTTGT+GGG + tig0019745:68391-68410 Msa1375780:intron 30.0%
TCTAGTAATATGTTGGCATA+TGG - tig0019745:68503-68522 None:intergenic 30.0%
CGGTTTATCTAGTAATATGT+TGG - tig0019745:68510-68529 None:intergenic 30.0%
! TCTAATTTTGTAGGCTAAGT+GGG - tig0019745:68926-68945 None:intergenic 30.0%
! TTCTAATTTTGTAGGCTAAG+TGG - tig0019745:68927-68946 None:intergenic 30.0%
!!! AATATTGCTCTAGCTTTTAC+AGG + tig0019745:68945-68964 Msa1375780:intron 30.0%
TTCATGTTCAATTTGCCTAT+TGG - tig0019745:68987-69006 None:intergenic 30.0%
! TACTATATTTTTCTTAGGGG+TGG + tig0019745:69007-69026 Msa1375780:intron 30.0%
CTTATATAGAAAGAGATTGG+CGG + tig0019745:69106-69125 Msa1375780:CDS 30.0%
GTATTACTTTGAGTAGTAAG+AGG - tig0019745:69296-69315 None:intergenic 30.0%
! ACTCGATGGAATTTTACATA+TGG + tig0019745:69388-69407 Msa1375780:three_prime_UTR 30.0%
AAATGGAAGAGAATTGCATT+TGG + tig0019745:69479-69498 Msa1375780:three_prime_UTR 30.0%
AATGGAAGAGAATTGCATTT+GGG + tig0019745:69480-69499 Msa1375780:three_prime_UTR 30.0%
TCGTAGTTTCCAGAACTTAA+CGG + tig0019745:64538-64557 Msa1375780:five_prime_UTR 35.0%
!! TTCATCATAAGAAGCGCTTA+TGG + tig0019745:64992-65011 Msa1375780:intron 35.0%
CAGAAAGTAGATGCTTTGAT+GGG + tig0019745:65298-65317 Msa1375780:CDS 35.0%
TTTCTCAAATCCTCTGATCA+TGG - tig0019745:65419-65438 None:intergenic 35.0%
CAGAGGATTTGAGAAATACA+TGG + tig0019745:65423-65442 Msa1375780:CDS 35.0%
GAGAAATACATGGAAGTAGA+TGG + tig0019745:65433-65452 Msa1375780:CDS 35.0%
ACATTCCTAATGTAACTGCT+TGG + tig0019745:65476-65495 Msa1375780:CDS 35.0%
TTATGCCAAGCAGTTACATT+AGG - tig0019745:65484-65503 None:intergenic 35.0%
GATTCTAGCCATACAAGATA+TGG + tig0019745:65672-65691 Msa1375780:intron 35.0%
GGAGTAAACCAACTTGATTA+TGG + tig0019745:65802-65821 Msa1375780:intron 35.0%
ACCAAAGTCTACAAACGTTT+AGG + tig0019745:65827-65846 Msa1375780:intron 35.0%
ACCTAAACGTTTGTAGACTT+TGG - tig0019745:65831-65850 None:intergenic 35.0%
TACAAACGTTTAGGTGTATG+AGG + tig0019745:65836-65855 Msa1375780:intron 35.0%
AAGCTTAGTATGAGAAGACT+AGG + tig0019745:65995-66014 Msa1375780:intron 35.0%
GAAAAGTTACTCTTCGTCAT+AGG + tig0019745:66146-66165 Msa1375780:intron 35.0%
!!! GCCAATTTTAGTTCTGTATC+AGG - tig0019745:66289-66308 None:intergenic 35.0%
TACAGAACTAAAATTGGCCA+AGG + tig0019745:66291-66310 Msa1375780:CDS 35.0%
!!! TGGTGTTACTGTTTTTCGTA+TGG + tig0019745:66318-66337 Msa1375780:CDS 35.0%
!!! GGTGTTACTGTTTTTCGTAT+GGG + tig0019745:66319-66338 Msa1375780:CDS 35.0%
! TTTTTCGTATGGGAATTGAC+TGG + tig0019745:66329-66348 Msa1375780:CDS 35.0%
!! GATTCTTTAAGGCTGTTTAC+TGG - tig0019745:66376-66395 None:intergenic 35.0%
ATCAATAGGGTTCGATCATA+TGG + tig0019745:66629-66648 Msa1375780:CDS 35.0%
GATTCGCAAATATGCTACAT+GGG - tig0019745:66881-66900 None:intergenic 35.0%
AGATTCGCAAATATGCTACA+TGG - tig0019745:66882-66901 None:intergenic 35.0%
ACATGTTTCTCAATCAATGC+AGG + tig0019745:66979-66998 Msa1375780:intron 35.0%
AGTAAGCATACAGAAGACAT+GGG - tig0019745:67060-67079 None:intergenic 35.0%
AAGTAAGCATACAGAAGACA+TGG - tig0019745:67061-67080 None:intergenic 35.0%
TGTATGCTTACTTACTGTTC+TGG + tig0019745:67068-67087 Msa1375780:CDS 35.0%
GTCAGAGGTTTCAGAATTTA+TGG + tig0019745:67233-67252 Msa1375780:intron 35.0%
CTAGTTGCACTAGAATGATA+TGG - tig0019745:67269-67288 None:intergenic 35.0%
TCAGACTGCTAAATGAGAAA+GGG - tig0019745:67310-67329 None:intergenic 35.0%
TTCAGACTGCTAAATGAGAA+AGG - tig0019745:67311-67330 None:intergenic 35.0%
GCAATATCAAACAGACCATA+GGG - tig0019745:67466-67485 None:intergenic 35.0%
AGCAATATCAAACAGACCAT+AGG - tig0019745:67467-67486 None:intergenic 35.0%
CAATGAATTAGCCAGTGAAA+CGG - tig0019745:67491-67510 None:intergenic 35.0%
! GCCTATAAAGTCCATCTTTT+TGG - tig0019745:67542-67561 None:intergenic 35.0%
TAGGATCGAAAAATCAAACC+TGG - tig0019745:67579-67598 None:intergenic 35.0%
ATCGTACAGAATGCATTGTT+AGG - tig0019745:67598-67617 None:intergenic 35.0%
ACGATTCTAACATGTACATC+AGG + tig0019745:67638-67657 Msa1375780:intron 35.0%
AATGATGAGTACAGTGAATC+TGG + tig0019745:67696-67715 Msa1375780:CDS 35.0%
AGTAAATGCTCCAAGAGATA+TGG - tig0019745:67849-67868 None:intergenic 35.0%
CTTCTTGTAACTGTTCTACA+GGG + tig0019745:67964-67983 Msa1375780:intron 35.0%
TATCAGAAATAGTCCAGAAG+AGG - tig0019745:68008-68027 None:intergenic 35.0%
!! TCTGGACTATTTCTGATAAC+TGG + tig0019745:68010-68029 Msa1375780:CDS 35.0%
!! CTGGACTATTTCTGATAACT+GGG + tig0019745:68011-68030 Msa1375780:CDS 35.0%
! TATTTCTGATAACTGGGAGT+GGG + tig0019745:68017-68036 Msa1375780:CDS 35.0%
TCTTGTCTTCTTCTCTTTAG+CGG - tig0019745:68287-68306 None:intergenic 35.0%
! GAAGACAAGACCATTTTATC+GGG + tig0019745:68297-68316 Msa1375780:CDS 35.0%
!! TGCGTTTCTATTGATTTGTG+GGG + tig0019745:68392-68411 Msa1375780:intron 35.0%
TATGCTCATATCAAGCATAG+AGG - tig0019745:68432-68451 None:intergenic 35.0%
CTGTCAAAGGTAGTAACTAT+CGG - tig0019745:68530-68549 None:intergenic 35.0%
CTAATACAGGCTTGATTGTT+TGG + tig0019745:68688-68707 Msa1375780:intron 35.0%
TTCAGTTTCGCACAATTCTT+TGG - tig0019745:68885-68904 None:intergenic 35.0%
CTTACCAAACAAACTCCAAT+AGG + tig0019745:68969-68988 Msa1375780:intron 35.0%
! TTTGCCTATTGGAGTTTGTT+TGG - tig0019745:68976-68995 None:intergenic 35.0%
! GGCCTTATATAGAAAGAGAT+TGG + tig0019745:69103-69122 Msa1375780:CDS 35.0%
CGCCAATCTCTTTCTATATA+AGG - tig0019745:69108-69127 None:intergenic 35.0%
! AGAATTGGCTTAAGTAATCC+TGG - tig0019745:69158-69177 None:intergenic 35.0%
TTCAACGATTCTCCCTAAAA+AGG + tig0019745:69190-69209 Msa1375780:CDS 35.0%
ATCAATGGCTAAGTTCAAAG+CGG - tig0019745:69252-69271 None:intergenic 35.0%
TGGGACTGCATTATATATCA+AGG + tig0019745:69499-69518 Msa1375780:three_prime_UTR 35.0%
! GAAACAAGTAACACTCCTTT+TGG - tig0019745:69678-69697 None:intergenic 35.0%
!! AAGGAGTGTTACTTGTTTCA+AGG + tig0019745:69679-69698 Msa1375780:three_prime_UTR 35.0%
GAAGAGGAGAAAGAGAAGAA+CGG - tig0019745:64517-64536 None:intergenic 40.0%
! TTCTGGAAACTACGAAGAAG+AGG - tig0019745:64533-64552 None:intergenic 40.0%
ACACTCATACCGTTAAGTTC+TGG - tig0019745:64550-64569 None:intergenic 40.0%
TGAAACTATCGTCATGGTAG+TGG - tig0019745:64604-64623 None:intergenic 40.0%
GAAGAGTGAAACTATCGTCA+TGG - tig0019745:64610-64629 None:intergenic 40.0%
AGAGAAGGAAAATGCATTGG+CGG - tig0019745:64679-64698 None:intergenic 40.0%
ACGAGAGAAGGAAAATGCAT+TGG - tig0019745:64682-64701 None:intergenic 40.0%
TTTGTTGCGAAAACGAGAGA+AGG - tig0019745:64694-64713 None:intergenic 40.0%
TATCGGAGGATTCATCGATA+GGG - tig0019745:64737-64756 None:intergenic 40.0%
TAAATAAGCTGCTATCCTGG+TGG + tig0019745:65067-65086 Msa1375780:intron 40.0%
GCAGAAAGTAGATGCTTTGA+TGG + tig0019745:65297-65316 Msa1375780:CDS 40.0%
GGGTAACAAGAAGTCTCTTA+AGG + tig0019745:65381-65400 Msa1375780:CDS 40.0%
GAAGTCTCTTAAGGTAGCTA+TGG + tig0019745:65390-65409 Msa1375780:CDS 40.0%
ATACATGGAAGTAGATGGAC+AGG + tig0019745:65438-65457 Msa1375780:CDS 40.0%
ACAAAGCAAGTGAGAGCTTA+CGG - tig0019745:65517-65536 None:intergenic 40.0%
! ATGTCATTTGCCGTCAACAT+TGG + tig0019745:65543-65562 Msa1375780:intron 40.0%
!!! GATTTTGAAGTGAAAGGGGA+TGG + tig0019745:65565-65584 Msa1375780:intron 40.0%
ACAGTGACTTGAGTTTAAGG+GGG - tig0019745:65782-65801 None:intergenic 40.0%
CACAGTGACTTGAGTTTAAG+GGG - tig0019745:65783-65802 None:intergenic 40.0%
CCACAGTGACTTGAGTTTAA+GGG - tig0019745:65784-65803 None:intergenic 40.0%
TCCACAGTGACTTGAGTTTA+AGG - tig0019745:65785-65804 None:intergenic 40.0%
ATGCCTGATAGATACACTCA+TGG + tig0019745:65930-65949 Msa1375780:intron 40.0%
CTTCCATGAGTGTATCTATC+AGG - tig0019745:65936-65955 None:intergenic 40.0%
!! TTAATGCCTGATTTTCAGGG+AGG + tig0019745:66240-66259 Msa1375780:intron 40.0%
!! TTTTCAGGGAGGAGAGATTA+AGG + tig0019745:66251-66270 Msa1375780:intron 40.0%
CTAAAATTGGCCAAGGATAC+TGG + tig0019745:66298-66317 Msa1375780:CDS 40.0%
AACAGTAACACCAGTATCCT+TGG - tig0019745:66311-66330 None:intergenic 40.0%
! ATATTAGTGGATGGAGCTCA+TGG + tig0019745:66459-66478 Msa1375780:intron 40.0%
! ATCTCTTTTGCCAGATGCAT+TGG - tig0019745:66535-66554 None:intergenic 40.0%
TTCACTTGGCGTTCTTTCTT+AGG + tig0019745:66571-66590 Msa1375780:intron 40.0%
TTAGGTCAACTATGCTGCAT+TGG + tig0019745:66589-66608 Msa1375780:intron 40.0%
CCACTAAAGGAAAAACTACC+TGG - tig0019745:66759-66778 None:intergenic 40.0%
! CCAGGTAGTTTTTCCTTTAG+TGG + tig0019745:66756-66775 Msa1375780:intron 40.0%
AAAATTGAGTCATCCTCAGC+AGG - tig0019745:66809-66828 None:intergenic 40.0%
GTAAGCATACAGAAGACATG+GGG - tig0019745:67059-67078 None:intergenic 40.0%
!! TTACTTACTGTTCTGGAACC+TGG + tig0019745:67075-67094 Msa1375780:CDS 40.0%
TGCAACAGATATCCAATGCA+TGG - tig0019745:67168-67187 None:intergenic 40.0%
GATATCTGTTGCACACTCAA+AGG + tig0019745:67175-67194 Msa1375780:CDS 40.0%
ATGATTACATCCACGAACTC+AGG + tig0019745:67201-67220 Msa1375780:CDS 40.0%
CAAATATTCACCTGAGTTCG+TGG - tig0019745:67214-67233 None:intergenic 40.0%
CTCAGGTGAATATTTGTCAG+AGG + tig0019745:67218-67237 Msa1375780:intron 40.0%
ACTGCTAAATGAGAAAGGGT+GGG - tig0019745:67306-67325 None:intergenic 40.0%
TGTACATCAGGAAGCGATTT+CGG + tig0019745:67650-67669 Msa1375780:intron 40.0%
! CATCATTTTCCACAAGCTTC+AGG - tig0019745:67683-67702 None:intergenic 40.0%
AACATGCGATATAAGCCATC+AGG - tig0019745:67735-67754 None:intergenic 40.0%
AATGCTCCAAGAGATATGGT+CGG - tig0019745:67845-67864 None:intergenic 40.0%
TGTTTATGCTGCTATGATCG+AGG + tig0019745:67872-67891 Msa1375780:CDS 40.0%
CCTGTAGAACAGTTACAAGA+AGG - tig0019745:67966-67985 None:intergenic 40.0%
CCTTCTTGTAACTGTTCTAC+AGG + tig0019745:67963-67982 Msa1375780:intron 40.0%
!! CTATTTCTGATAACTGGGAG+TGG + tig0019745:68016-68035 Msa1375780:CDS 40.0%
ACCGAGCAAATAATCTTGCA+CGG + tig0019745:68079-68098 Msa1375780:CDS 40.0%
TCCGTGCAAGATTATTTGCT+CGG - tig0019745:68083-68102 None:intergenic 40.0%
TTTAATGGCCTCTTGATTGC+AGG + tig0019745:68198-68217 Msa1375780:intron 40.0%
ACTTACAACCTGCAATCAAG+AGG - tig0019745:68209-68228 None:intergenic 40.0%
TGATTGCAGGTTGTAAGTAC+CGG + tig0019745:68211-68230 Msa1375780:intron 40.0%
ATCATCGCGTGTAACTTTAC+CGG - tig0019745:68233-68252 None:intergenic 40.0%
CATTATGCAACTGCTGTCAA+AGG - tig0019745:68543-68562 None:intergenic 40.0%
ATAAGTTGCAGGTAAGGTTC+AGG + tig0019745:68633-68652 Msa1375780:intron 40.0%
TAAGTTGCAGGTAAGGTTCA+GGG + tig0019745:68634-68653 Msa1375780:intron 40.0%
! AGAGAGTGCACAACTAATAC+AGG + tig0019745:68675-68694 Msa1375780:intron 40.0%
AACCTGCGCTAAGACAAATT+TGG - tig0019745:68798-68817 None:intergenic 40.0%
AATTTGTCTTAGCGCAGGTT+TGG + tig0019745:68798-68817 Msa1375780:intron 40.0%
TAAATGCATGACAAGTCTCC+TGG + tig0019745:69043-69062 Msa1375780:intron 40.0%
TCTATATAAGGCCGCTGTAT+GGG - tig0019745:69096-69115 None:intergenic 40.0%
TTCTATATAAGGCCGCTGTA+TGG - tig0019745:69097-69116 None:intergenic 40.0%
ATAGAAAGAGATTGGCGGTT+TGG + tig0019745:69111-69130 Msa1375780:CDS 40.0%
! ATTGGCTTAAGTAATCCTGG+AGG - tig0019745:69155-69174 None:intergenic 40.0%
TCAATGGCTAAGTTCAAAGC+GGG - tig0019745:69251-69270 None:intergenic 40.0%
TACTAGAACGCTGAGTCATT+TGG - tig0019745:69343-69362 None:intergenic 40.0%
!! CGAGTTGATCATTCTTGTGA+GGG - tig0019745:69373-69392 None:intergenic 40.0%
!! TCGAGTTGATCATTCTTGTG+AGG - tig0019745:69374-69393 None:intergenic 40.0%
CACAAGAATGATCAACTCGA+TGG + tig0019745:69374-69393 Msa1375780:three_prime_UTR 40.0%
TACATATGGATCTTCAGCAC+AGG + tig0019745:69402-69421 Msa1375780:three_prime_UTR 40.0%
TCCAGAATGAATCTCTGTAG+CGG - tig0019745:69441-69460 None:intergenic 40.0%
CTCATCTCATCTCAGAACAG+TGG + tig0019745:64473-64492 Msa1375780:five_prime_UTR 45.0%
AGTGAGAGTGACTAAAGCTC+CGG - tig0019745:64652-64671 None:intergenic 45.0%
CATCGATAGGGGAAGTGAAA+CGG - tig0019745:64725-64744 None:intergenic 45.0%
ATCGGAGGATTCATCGATAG+GGG - tig0019745:64736-64755 None:intergenic 45.0%
GTATCGGAGGATTCATCGAT+AGG - tig0019745:64738-64757 None:intergenic 45.0%
! GTTGAAATCGGCGAGAGTAT+CGG - tig0019745:64754-64773 None:intergenic 45.0%
!! CTCGCCGATTTCAACATTAC+CGG + tig0019745:64759-64778 Msa1375780:CDS 45.0%
!! ATTTTGACAAGCTCACCACC+AGG - tig0019745:65085-65104 None:intergenic 45.0%
ATCTACTTTCTGCTCAGCAC+CGG - tig0019745:65290-65309 None:intergenic 45.0%
GTCTCTTAAGGTAGCTATGG+AGG + tig0019745:65393-65412 Msa1375780:CDS 45.0%
ATGGAAGTAGATGGACAGGA+AGG + tig0019745:65442-65461 Msa1375780:CDS 45.0%
! TTTGAAGTGAAAGGGGATGG+TGG + tig0019745:65568-65587 Msa1375780:intron 45.0%
TTGAAGTGAAAGGGGATGGT+GGG + tig0019745:65569-65588 Msa1375780:intron 45.0%
CAGTGACTTGAGTTTAAGGG+GGG - tig0019745:65781-65800 None:intergenic 45.0%
CCCTTAAACTCAAGTCACTG+TGG + tig0019745:65781-65800 Msa1375780:intron 45.0%
TGAGGATGCCTATAGAGAGA+AGG + tig0019745:65854-65873 Msa1375780:intron 45.0%
TGCCTATAGAGAGAAGGCAA+TGG + tig0019745:65860-65879 Msa1375780:intron 45.0%
GTCCATTGCCTTCTCTCTAT+AGG - tig0019745:65865-65884 None:intergenic 45.0%
ATCTCTCCTCCCTGAAAATC+AGG - tig0019745:66249-66268 None:intergenic 45.0%
! GGGAGGAGAGATTAAGGTTT+TGG + tig0019745:66257-66276 Msa1375780:intron 45.0%
TGACCATTGACCAATGCATC+TGG + tig0019745:66522-66541 Msa1375780:intron 45.0%
! TTGCCAGATGCATTGGTCAA+TGG - tig0019745:66528-66547 None:intergenic 45.0%
CTTCCAACCTCCATAATCAC+CGG - tig0019745:66702-66721 None:intergenic 45.0%
TGATTATGGAGGTTGGAAGC+TGG + tig0019745:66703-66722 Msa1375780:CDS 45.0%
TTGGAAGCTGGAAAAGACAG+TGG + tig0019745:66715-66734 Msa1375780:CDS 45.0%
TGGACATCCTGATATGCTAG+AGG + tig0019745:67103-67122 Msa1375780:CDS 45.0%
GAAAACACCTGTAGGAAGTG+CGG - tig0019745:67138-67157 None:intergenic 45.0%
CTAAATGAGAAAGGGTGGGA+AGG - tig0019745:67302-67321 None:intergenic 45.0%
GACTGCTAAATGAGAAAGGG+TGG - tig0019745:67307-67326 None:intergenic 45.0%
TTGAAGCTGACTGCACTACT+TGG + tig0019745:67334-67353 Msa1375780:intron 45.0%
! TGATATTGCTGCCGTTTCAC+TGG + tig0019745:67477-67496 Msa1375780:CDS 45.0%
GTACATCAGGAAGCGATTTC+GGG + tig0019745:67651-67670 Msa1375780:intron 45.0%
GATGGATATGGTCCCAAGTT+TGG + tig0019745:68042-68061 Msa1375780:CDS 45.0%
ACTGCGACAAGTCCAAACTT+GGG - tig0019745:68057-68076 None:intergenic 45.0%
AACTGCGACAAGTCCAAACT+TGG - tig0019745:68058-68077 None:intergenic 45.0%
! AAGACCATTTTATCGGGCTG+TGG + tig0019745:68303-68322 Msa1375780:CDS 45.0%
TTGTCCACAGCCCGATAAAA+TGG - tig0019745:68310-68329 None:intergenic 45.0%
TATCGGGCTGTGGACAAAAA+TGG + tig0019745:68313-68332 Msa1375780:CDS 45.0%
CTGCGCTAAGACAAATTTGG+TGG - tig0019745:68795-68814 None:intergenic 45.0%
CACCAAATTTGTCTTAGCGC+AGG + tig0019745:68793-68812 Msa1375780:intron 45.0%
GACTTGATGAACCCATACAG+CGG + tig0019745:69082-69101 Msa1375780:CDS 45.0%
!! GCGGTTTGGTCATTATGAGA+TGG + tig0019745:69125-69144 Msa1375780:CDS 45.0%
TTATGAGATGGATGACCTCC+AGG + tig0019745:69137-69156 Msa1375780:CDS 45.0%
GGATCTTCAGCACAGGATTT+AGG + tig0019745:69409-69428 Msa1375780:intron 45.0%
TCCGCTACAGAGATTCATTC+TGG + tig0019745:69437-69456 Msa1375780:intron 45.0%
TCTGAACAATGCAGCAAAGC+TGG - tig0019745:69541-69560 None:intergenic 45.0%
!! TATCAAAAAAAATTTAAATA+AGG - tig0019745:66095-66114 None:intergenic 5.0%
CTAACTGCCACTAAACTCGC+CGG + tig0019745:64630-64649 Msa1375780:CDS 50.0%
TAAAGCTCCGGCGAGTTTAG+TGG - tig0019745:64640-64659 None:intergenic 50.0%
!! AGGACAGGCTTGATGATGCT+TGG + tig0019745:65236-65255 Msa1375780:CDS 50.0%
!! GCTGAACAAGAGAGTGTTGC+CGG + tig0019745:65268-65287 Msa1375780:CDS 50.0%
CCATATCATCTGCGCAACGA+GGG + tig0019745:65353-65372 Msa1375780:CDS 50.0%
CAAGTGAGAGCTTACGGATG+TGG - tig0019745:65511-65530 None:intergenic 50.0%
ACACACAGACACACACACAG+AGG - tig0019745:66181-66200 None:intergenic 50.0%
!! AGGCTGTTTACTGGCTCATG+AGG - tig0019745:66367-66386 None:intergenic 50.0%
! CTGCATTGGAGCGCTATAAG+TGG + tig0019745:66603-66622 Msa1375780:CDS 50.0%
TTCATCACTCACTTCCACCC+TGG + tig0019745:66675-66694 Msa1375780:CDS 50.0%
TCATCACTCACTTCCACCCT+GGG + tig0019745:66676-66695 Msa1375780:CDS 50.0%
AGCATATCAGGATGTCCACC+AGG - tig0019745:67101-67120 None:intergenic 50.0%
GTAGCAGCCTCTAGCATATC+AGG - tig0019745:67113-67132 None:intergenic 50.0%
! TCCTACAGGTGTTTTCCAGC+AGG + tig0019745:67142-67161 Msa1375780:CDS 50.0%
! TTTTCCAGCAGGCCATGCAT+TGG + tig0019745:67153-67172 Msa1375780:CDS 50.0%
ATATCCAATGCATGGCCTGC+TGG - tig0019745:67160-67179 None:intergenic 50.0%
AATGAGAAAGGGTGGGAAGG+CGG - tig0019745:67299-67318 None:intergenic 50.0%
!! GTGTCGTTTATGCGACCCTA+TGG + tig0019745:67448-67467 Msa1375780:CDS 50.0%
AGGCGTTAACTATTACGGCC+AGG + tig0019745:67558-67577 Msa1375780:CDS 50.0%
GAGTACAGTGAATCTGGACG+TGG + tig0019745:67702-67721 Msa1375780:CDS 50.0%
GGACGTGGAGTATATCCTGA+TGG + tig0019745:67717-67736 Msa1375780:CDS 50.0%
CAGAAGAGGTAACCAAGCAC+AGG - tig0019745:67994-68013 None:intergenic 50.0%
CTGTGCTTGGTTACCTCTTC+TGG + tig0019745:67992-68011 Msa1375780:CDS 50.0%
AACAGATGGTAAGAAGGGCG+AGG - tig0019745:68108-68127 None:intergenic 50.0%
! GCGATGATCGTGATAACGCT+TGG + tig0019745:68245-68264 Msa1375780:CDS 50.0%
! AGGTTTGGTACTGCGTTACG+AGG + tig0019745:68813-68832 Msa1375780:intron 50.0%
! GGTTTGGTACTGCGTTACGA+GGG + tig0019745:68814-68833 Msa1375780:intron 50.0%
GCAGTGAACATGTTGTGCTG+TGG + tig0019745:68836-68855 Msa1375780:intron 50.0%
! ATGACAAGTCTCCTGGCTTG+TGG + tig0019745:69050-69069 Msa1375780:intron 50.0%
!! ATCGTCATGGTAGTGGCGAG+TGG - tig0019745:64597-64616 None:intergenic 55.0%
CGGCGAGTTTAGTGGCAGTT+AGG - tig0019745:64632-64651 None:intergenic 55.0%
!! GAAATCGGCGAGAGTATCGG+AGG - tig0019745:64751-64770 None:intergenic 55.0%
CTTTGGTCTAGCGACAGCAC+CGG + tig0019745:65204-65223 Msa1375780:intron 55.0%
AGCCTGTCCTCAACATGTGC+CGG - tig0019745:65226-65245 None:intergenic 55.0%
TTGAGACCCACCATCAGCAG+TGG - tig0019745:65329-65348 None:intergenic 55.0%
GCCATATCATCTGCGCAACG+AGG + tig0019745:65352-65371 Msa1375780:CDS 55.0%
CCCTCGTTGCGCAGATGATA+TGG - tig0019745:65356-65375 None:intergenic 55.0%
ATCTGCGCAACGAGGGCTTA+AGG + tig0019745:65360-65379 Msa1375780:CDS 55.0%
TCTGCGCAACGAGGGCTTAA+GGG + tig0019745:65361-65380 Msa1375780:CDS 55.0%
GCTATGGAGGCCATGATCAG+AGG + tig0019745:65406-65425 Msa1375780:CDS 55.0%
AGACACACACACAGAGGACG+CGG - tig0019745:66175-66194 None:intergenic 55.0%
!! TACTGTTCTGGAACCTGGCC+TGG + tig0019745:67080-67099 Msa1375780:CDS 55.0%
GCTACTTCCGCACTTCCTAC+AGG + tig0019745:67128-67147 Msa1375780:CDS 55.0%
GCCTGCTGGAAAACACCTGT+AGG - tig0019745:67146-67165 None:intergenic 55.0%
TCGTCGCGTGAGTACATGTC+TGG - tig0019745:67622-67641 None:intergenic 55.0%
GATCCGCCGACCATATCTCT+TGG + tig0019745:67836-67855 Msa1375780:CDS 55.0%
GCTCCAAGAGATATGGTCGG+CGG - tig0019745:67842-67861 None:intergenic 55.0%
!! GATAACTGGGAGTGGGCTGA+TGG + tig0019745:68024-68043 Msa1375780:CDS 55.0%
!! TGGGAGTGGGCTGATGGATA+TGG + tig0019745:68030-68049 Msa1375780:CDS 55.0%
!! GACAGCACCGGCACATGTTG+AGG + tig0019745:65216-65235 Msa1375780:intron 60.0%
CACCGGCACATGTTGAGGAC+AGG + tig0019745:65221-65240 Msa1375780:CDS 60.0%
ATGGGCTCTGCCACTGCTGA+TGG + tig0019745:65316-65335 Msa1375780:CDS 60.0%
GCTCTGCCACTGCTGATGGT+GGG + tig0019745:65320-65339 Msa1375780:CDS 60.0%
CCTCCATAATCACCGGCCCA+GGG - tig0019745:66695-66714 None:intergenic 60.0%
ACCTCCATAATCACCGGCCC+AGG - tig0019745:66696-66715 None:intergenic 60.0%
GGGCCGGTGATTATGGAGGT+TGG + tig0019745:66696-66715 Msa1375780:CDS 60.0%
CCTCAGCAGGCAGAGTTCGA+TGG - tig0019745:66796-66815 None:intergenic 60.0%
CCATCGAACTCTGCCTGCTG+AGG + tig0019745:66793-66812 Msa1375780:intron 60.0%
!! TGTTCTGGAACCTGGCCTGG+TGG + tig0019745:67083-67102 Msa1375780:CDS 60.0%
ATCAGGATGTCCACCAGGCC+AGG - tig0019745:67096-67115 None:intergenic 60.0%
! CAGGAAGCGATTTCGGGTGC+TGG + tig0019745:67657-67676 Msa1375780:intron 60.0%
CTACAGGGTGTGCCTGTGCT+TGG + tig0019745:67979-67998 Msa1375780:intron 60.0%
! GTCTCCTGGCTTGTGGTGAC+AGG + tig0019745:69057-69076 Msa1375780:intron 60.0%
! TCCTGGCTTGTGGTGACAGG+TGG + tig0019745:69060-69079 Msa1375780:intron 60.0%
TCCACCTGTCACCACAAGCC+AGG - tig0019745:69064-69083 None:intergenic 60.0%
GGCTCTGCCACTGCTGATGG+TGG + tig0019745:65319-65338 Msa1375780:CDS 65.0%
CACTCACTTCCACCCTGGGC+CGG + tig0019745:66680-66699 Msa1375780:CDS 65.0%
CCATAATCACCGGCCCAGGG+TGG - tig0019745:66692-66711 None:intergenic 65.0%
CCACCCTGGGCCGGTGATTA+TGG + tig0019745:66689-66708 Msa1375780:CDS 65.0%
CCCTGGGCCGGTGATTATGG+AGG + tig0019745:66692-66711 Msa1375780:CDS 65.0%
!! GGGTGCTGGCCTGAAGCTTG+TGG + tig0019745:67671-67690 Msa1375780:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0019745 gene 64318 69777 64318 ID=Msa1375780;Name=Msa1375780
tig0019745 mRNA 64318 69777 64318 ID=Msa1375780-mRNA-1;Parent=Msa1375780;Name=Msa1375780-mRNA-1;_AED=0.17;_eAED=0.17;_QI=291|0.9|0.90|1|0.8|0.81|11|497|618
tig0019745 exon 64318 64780 64318 ID=Msa1375780-mRNA-1:exon:4698;Parent=Msa1375780-mRNA-1
tig0019745 exon 65221 65515 65221 ID=Msa1375780-mRNA-1:exon:4699;Parent=Msa1375780-mRNA-1
tig0019745 exon 66258 66396 66258 ID=Msa1375780-mRNA-1:exon:4700;Parent=Msa1375780-mRNA-1
tig0019745 exon 66593 66759 66593 ID=Msa1375780-mRNA-1:exon:4701;Parent=Msa1375780-mRNA-1
tig0019745 exon 67001 67222 67001 ID=Msa1375780-mRNA-1:exon:4702;Parent=Msa1375780-mRNA-1
tig0019745 exon 67411 67579 67411 ID=Msa1375780-mRNA-1:exon:4703;Parent=Msa1375780-mRNA-1
tig0019745 exon 67660 67893 67660 ID=Msa1375780-mRNA-1:exon:4704;Parent=Msa1375780-mRNA-1
tig0019745 exon 67985 68134 67985 ID=Msa1375780-mRNA-1:exon:4705;Parent=Msa1375780-mRNA-1
tig0019745 exon 68220 68349 68220 ID=Msa1375780-mRNA-1:exon:4706;Parent=Msa1375780-mRNA-1
tig0019745 exon 69079 69423 69079 ID=Msa1375780-mRNA-1:exon:4707;Parent=Msa1375780-mRNA-1
tig0019745 exon 69447 69777 69447 ID=Msa1375780-mRNA-1:exon:4708;Parent=Msa1375780-mRNA-1
tig0019745 five_prime_UTR 64318 64608 64318 ID=Msa1375780-mRNA-1:five_prime_utr;Parent=Msa1375780-mRNA-1
tig0019745 CDS 64609 64780 64609 ID=Msa1375780-mRNA-1:cds;Parent=Msa1375780-mRNA-1
tig0019745 CDS 65221 65515 65221 ID=Msa1375780-mRNA-1:cds;Parent=Msa1375780-mRNA-1
tig0019745 CDS 66258 66396 66258 ID=Msa1375780-mRNA-1:cds;Parent=Msa1375780-mRNA-1
tig0019745 CDS 66593 66759 66593 ID=Msa1375780-mRNA-1:cds;Parent=Msa1375780-mRNA-1
tig0019745 CDS 67001 67222 67001 ID=Msa1375780-mRNA-1:cds;Parent=Msa1375780-mRNA-1
tig0019745 CDS 67411 67579 67411 ID=Msa1375780-mRNA-1:cds;Parent=Msa1375780-mRNA-1
tig0019745 CDS 67660 67893 67660 ID=Msa1375780-mRNA-1:cds;Parent=Msa1375780-mRNA-1
tig0019745 CDS 67985 68134 67985 ID=Msa1375780-mRNA-1:cds;Parent=Msa1375780-mRNA-1
tig0019745 CDS 68220 68349 68220 ID=Msa1375780-mRNA-1:cds;Parent=Msa1375780-mRNA-1
tig0019745 CDS 69079 69257 69079 ID=Msa1375780-mRNA-1:cds;Parent=Msa1375780-mRNA-1
tig0019745 three_prime_UTR 69258 69423 69258 ID=Msa1375780-mRNA-1:three_prime_utr;Parent=Msa1375780-mRNA-1
tig0019745 three_prime_UTR 69447 69777 69447 ID=Msa1375780-mRNA-1:three_prime_utr;Parent=Msa1375780-mRNA-1
Gene Sequence

>Msa1375780

ATGACGATAGTTTCACTCTTCCTAACTGCCACTAAACTCGCCGGAGCTTTAGTCACTCTCACTGTCGCCGCCAATGCATTTTCCTTCTCTCGTTTTCGCAACAAAAATCTTCGCCGTTTCACTTCCCCTATCGATGAATCCTCCGATACTCTCGCCGATTTCAACATTACCGCACCGGCACATGTTGAGGACAGGCTTGATGATGCTTGGATTCAGTTTGCTGAACAAGAGAGTGTTGCCGGTGCTGAGCAGAAAGTAGATGCTTTGATGGGCTCTGCCACTGCTGATGGTGGGTCTCAACAAGCCATATCATCTGCGCAACGAGGGCTTAAGGGTAACAAGAAGTCTCTTAAGGTAGCTATGGAGGCCATGATCAGAGGATTTGAGAAATACATGGAAGTAGATGGACAGGAAGGAGAAGAAGAACACATTCCTAATGTAACTGCTTGGCATAATGTTCCACATCCGGAGGAGAGATTAAGGTTTTGGTCTGATCCTGATACAGAACTAAAATTGGCCAAGGATACTGGTGTTACTGTTTTTCGTATGGGAATTGACTGGTCAAGAGTCATGCCTCATGAGCCAGTAAACAGCCTTAAAGAATCTGTCAACTATGCTGCATTGGAGCGCTATAAGTGGATTATCAATAGGGTTCGATCATATGGAATGAAAGTGATGCTCACTCTTTTTCATCACTCACTTCCACCCTGGGCCGGTGATTATGGAGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGATTTTACCAGGCTTGTTGTTGACAGTGTATCAGATTTAGTAGACTATTGGGTAACATTTAACGAGCCCCATGTCTTCTGTATGCTTACTTACTGTTCTGGAACCTGGCCTGGTGGACATCCTGATATGCTAGAGGCTGCTACTTCCGCACTTCCTACAGGTGTTTTCCAGCAGGCCATGCATTGGATATCTGTTGCACACTCAAAGGCATATGATTACATCCACGAACTCAGTAACTCATCAAATCAAATAGTTGGTGTCGCACATCATGTGTCGTTTATGCGACCCTATGGTCTGTTTGATATTGCTGCCGTTTCACTGGCTAATTCATTGAGTCTCTTCCCATTCATCGATGAAATATCCAAAAAGATGGACTTTATAGGCGTTAACTATTACGGCCAGGAAGCGATTTCGGGTGCTGGCCTGAAGCTTGTGGAAAATGATGAGTACAGTGAATCTGGACGTGGAGTATATCCTGATGGCTTATATCGCATGTTACTTCAGTTCCATGAAAGATACAAGCATCTAAATGTCCCTTTCATTATTGCTGAAAATGGAATTGCAGATGAGACTGATTTGATCCGCCGACCATATCTCTTGGAGCATTTACTTGCTGTTTATGCTGCTATGATCGAGGGTGTGCCTGTGCTTGGTTACCTCTTCTGGACTATTTCTGATAACTGGGAGTGGGCTGATGGATATGGTCCCAAGTTTGGACTTGTCGCAGTTGACCGAGCAAATAATCTTGCACGGATTCCTCGCCCTTCTTACCATCTGTTTTCTAAAGTTGTAAGTACCGGTAAAGTTACACGCGATGATCGTGATAACGCTTGGAATGAACTTCAAAGAGCCGCTAAAGAGAAGAAGACAAGACCATTTTATCGGGCTGTGGACAAAAATGGTTTAATGTTAGCAGGTGGACTTGATGAACCCATACAGCGGCCTTATATAGAAAGAGATTGGCGGTTTGGTCATTATGAGATGGATGACCTCCAGGATTACTTAAGCCAATTCTCAAGATTCATTATTCAACGATTCTCCCTAAAAAGGAAAAAGAAATCTCAAAAGGAGCAATTAGTTCTGCACCCGCTTTGA

Protein sequence

>Msa1375780

MTIVSLFLTATKLAGALVTLTVAANAFSFSRFRNKNLRRFTSPIDESSDTLADFNITAPAHVEDRLDDAWIQFAEQESVAGAEQKVDALMGSATADGGSQQAISSAQRGLKGNKKSLKVAMEAMIRGFEKYMEVDGQEGEEEHIPNVTAWHNVPHPEERLRFWSDPDTELKLAKDTGVTVFRMGIDWSRVMPHEPVNSLKESVNYAALERYKWIINRVRSYGMKVMLTLFHHSLPPWAGDYGGWKLEKTVDYFMDFTRLVVDSVSDLVDYWVTFNEPHVFCMLTYCSGTWPGGHPDMLEAATSALPTGVFQQAMHWISVAHSKAYDYIHELSNSSNQIVGVAHHVSFMRPYGLFDIAAVSLANSLSLFPFIDEISKKMDFIGVNYYGQEAISGAGLKLVENDEYSESGRGVYPDGLYRMLLQFHERYKHLNVPFIIAENGIADETDLIRRPYLLEHLLAVYAAMIEGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFSKVVSTGKVTRDDRDNAWNELQRAAKEKKTRPFYRAVDKNGLMLAGGLDEPIQRPYIERDWRFGHYEMDDLQDYLSQFSRFIIQRFSLKRKKKSQKEQLVLHPL*