AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0334280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0334280 MtrunA17_Chr2g0317921 98.496 399 6 0 1 399 1 399 0.0 811
Msa0334280 MtrunA17_Chr1g0182541 34.286 315 168 13 88 396 36 317 1.82e-33 127
Msa0334280 MtrunA17_Chr6g0470501 32.602 319 171 11 88 396 58 342 2.12e-32 125
Msa0334280 MtrunA17_Chr1g0202931 30.159 315 181 11 88 396 31 312 4.24e-31 120
Msa0334280 MtrunA17_Chr7g0262941 32.308 325 162 14 88 396 36 318 8.49e-31 120
Msa0334280 MtrunA17_Chr6g0470321 30.769 312 182 10 90 396 41 323 1.14e-30 119
Msa0334280 MtrunA17_Chr8g0386971 32.817 323 160 13 88 395 31 311 1.14e-28 114
Msa0334280 MtrunA17_Chr1g0202891 30.794 315 179 13 88 396 31 312 1.67e-28 113
Msa0334280 MtrunA17_Chr1g0202871 29.712 313 185 10 88 396 31 312 4.55e-27 109
Msa0334280 MtrunA17_Chr4g0058731 28.797 316 185 12 88 396 50 332 5.34e-27 110
Msa0334280 MtrunA17_Chr1g0202861 30.255 314 182 11 88 396 72 353 2.68e-25 105
Msa0334280 MtrunA17_Chr8g0388831 27.439 328 202 11 73 396 26 321 3.04e-24 102
Msa0334280 MtrunA17_Chr3g0117241 34.746 118 71 3 88 203 39 152 5.36e-17 77.8
Msa0334280 MtrunA17_Chr6g0481311 35.833 120 63 5 88 197 63 178 5.63e-13 69.7
Msa0334280 MtrunA17_Chr6g0469251 26.250 320 191 12 94 398 14 303 3.32e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0334280 AT5G54190.1 82.716 405 64 2 1 399 1 405 0.0 688
Msa0334280 AT4G27440.2 80.846 402 73 2 1 399 1 401 0.0 652
Msa0334280 AT4G27440.1 80.846 402 73 2 1 399 1 401 0.0 652
Msa0334280 AT1G03630.1 78.412 403 81 4 1 399 1 401 0.0 626
Msa0334280 AT1G03630.2 78.304 401 83 4 1 399 1 399 0.0 623
Msa0334280 AT5G54190.2 90.493 284 27 0 116 399 1 284 0.0 546
Msa0334280 AT4G23430.2 29.814 322 172 10 88 395 31 312 1.53e-30 119
Msa0334280 AT4G23430.1 30.435 322 168 11 88 395 31 310 1.12e-29 117
Msa0334280 AT4G23420.3 31.013 316 176 13 88 395 48 329 2.71e-29 116
Msa0334280 AT4G23420.1 31.013 316 176 13 88 395 31 312 3.18e-29 116
Msa0334280 AT4G23420.2 31.013 316 176 13 88 395 31 312 3.18e-29 116
Msa0334280 AT4G23420.5 33.613 238 128 9 88 318 31 245 1.74e-27 110
Msa0334280 AT4G23420.4 33.613 238 128 9 88 318 31 245 2.30e-27 109
Msa0334280 AT2G37540.2 35.021 237 117 11 88 315 35 243 9.25e-27 108
Msa0334280 AT4G11410.1 30.476 315 182 10 88 397 31 313 9.91e-27 109
Msa0334280 AT2G37540.1 33.846 260 132 12 88 335 35 266 1.02e-26 109
Msa0334280 AT4G24050.1 30.581 327 175 13 84 396 32 320 6.62e-26 107
Msa0334280 AT4G11410.2 33.898 236 125 7 88 317 31 241 4.89e-25 103
Msa0334280 AT5G50130.9 30.126 239 138 8 88 321 38 252 8.33e-25 102
Msa0334280 AT5G50130.3 30.962 239 137 9 88 321 38 253 1.46e-24 102
Msa0334280 AT5G02540.1 29.605 304 173 14 100 396 47 316 2.83e-24 102
Msa0334280 AT4G24050.2 32.218 239 122 8 84 310 32 242 5.16e-24 100
Msa0334280 AT5G50130.1 30.962 239 137 9 88 321 38 253 8.86e-24 101
Msa0334280 AT5G50130.2 30.126 239 138 8 88 321 38 252 1.04e-23 100
Msa0334280 AT5G50130.4 30.962 239 137 9 88 321 38 253 1.60e-23 100
Msa0334280 AT5G50130.8 30.085 236 136 8 91 321 8 219 3.06e-23 99.4
Msa0334280 AT5G50130.7 30.932 236 135 9 91 321 8 220 5.14e-23 98.6
Msa0334280 AT5G50130.6 30.085 236 136 8 91 321 8 219 6.06e-23 98.2
Msa0334280 AT5G50130.5 30.932 236 135 9 91 321 8 220 9.99e-23 97.4
Msa0334280 AT1G64590.1 29.412 323 184 14 84 396 32 320 1.30e-22 98.2
Msa0334280 AT4G23430.4 27.329 322 170 11 88 395 31 302 2.92e-21 94.0
Msa0334280 AT4G23430.3 27.950 322 166 12 88 395 31 300 2.00e-20 91.3
Msa0334280 AT4G09750.1 28.926 242 136 8 88 325 45 254 7.04e-19 87.0
Msa0334280 AT4G27760.1 29.878 328 180 15 88 398 59 353 1.78e-16 80.9
Msa0334280 AT5G53100.1 29.518 332 187 12 84 398 42 343 1.82e-15 77.8
Msa0334280 AT5G53090.1 28.955 335 184 14 83 398 53 352 1.33e-14 75.1

Find 123 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACAAGAACAAACCTCTTT+TGG 0.237389 2_4:-52574186 None:intergenic
CATTGAAACTTAGCAAATTA+AGG 0.257244 2_4:-52574121 None:intergenic
TTGCCACAACAGGCTTGTTT+AGG 0.258724 2_4:+52575962 Msa0334280:CDS
TAACAAAATCTGGTGTTTAC+TGG 0.260185 2_4:+52576430 Msa0334280:CDS
GGACTTGCCGGTGGCTTGAA+TGG 0.269291 2_4:+52575784 Msa0334280:CDS
AGGAAAATGGCATGTAATTA+TGG 0.286577 2_4:+52575167 Msa0334280:CDS
TTTCCTCATGGTATCGTCTA+TGG 0.300626 2_4:-52575903 None:intergenic
CTCTACATCACTTGCCTCTT+GGG 0.301301 2_4:-52576493 None:intergenic
AGCCTTTGGTGATGTACTTC+TGG 0.301562 2_4:-52576023 None:intergenic
CTTGCCATCAGGTGAGGATT+TGG 0.306599 2_4:-52575061 None:intergenic
GGTGACTTGAGGGGACTTGC+CGG 0.313480 2_4:+52575772 Msa0334280:CDS
GTGATCACTGGTGCTTCATC+TGG 0.327170 2_4:+52575108 Msa0334280:CDS
CACTTGCCTCTTGGGATAGC+TGG 0.328716 2_4:-52576485 None:intergenic
AATAAAATCATTCAACTGTT+TGG 0.330418 2_4:+52576735 Msa0334280:three_prime_UTR
TCTCTACATCACTTGCCTCT+TGG 0.331750 2_4:-52576494 None:intergenic
CAACATCTATGCTGAGTTAG+AGG 0.337078 2_4:+52576579 Msa0334280:three_prime_UTR
TGCCACAACAGGCTTGTTTA+GGG 0.348200 2_4:+52575963 Msa0334280:CDS
GGCATGTAATTATGGCTTGC+AGG 0.351136 2_4:+52575175 Msa0334280:CDS
AGTCACCAAGGTTAGCCTTT+GGG 0.353144 2_4:-52575756 None:intergenic
GATCCAAGCTTAACAAAATC+TGG 0.356495 2_4:+52576420 Msa0334280:CDS
AGACGATACCATGAGGAAAC+TGG 0.360530 2_4:+52575907 Msa0334280:CDS
TTGCAGCTCTTGCAGCTTTG+AGG 0.361561 2_4:-52575203 None:intergenic
CTTAATTTGCTAAGTTTCAA+TGG 0.361746 2_4:+52574122 Msa0334280:exon
GACTTGCCGGTGGCTTGAAT+GGG 0.370611 2_4:+52575785 Msa0334280:CDS
CTTTGGCCGAGACAGGAAAA+TGG 0.386297 2_4:+52575154 Msa0334280:CDS
TTGGTGATGTACTTCTGGAA+TGG 0.387469 2_4:-52576018 None:intergenic
ATCTTCTGAGACGTAGCCTT+TGG 0.388065 2_4:-52576037 None:intergenic
GCCAATTCGTTGATAACTTC+AGG 0.388170 2_4:+52575295 Msa0334280:CDS
TGGTGATGTACTTCTGGAAT+GGG 0.389553 2_4:-52576017 None:intergenic
TTCTTTCTCCATTCCAAAAG+AGG 0.396884 2_4:+52574173 Msa0334280:CDS
TTAACTAAAATGATTTATAG+TGG 0.400277 2_4:-52576827 None:intergenic
TAGTGAGAAGCTTGTTGGTT+TGG 0.402864 2_4:+52576539 Msa0334280:CDS
AAGTGTTGTAATTAAAATTG+TGG 0.404694 2_4:-52574061 None:intergenic
CCTGGTTGCATTGCCACAAC+AGG 0.418620 2_4:+52575952 Msa0334280:CDS
AAACTTGAATAAGATTTAAG+AGG 0.421424 2_4:-52576803 None:intergenic
AGTGTTGTAATTAAAATTGT+GGG 0.429608 2_4:-52574060 None:intergenic
TCAAAGCGCTTGATCATTGT+CGG 0.433806 2_4:+52575492 Msa0334280:CDS
GCCTGAAGTTATCAACGAAT+TGG 0.436099 2_4:-52575296 None:intergenic
CCTAGCCACTGCTAAGGCTT+TGG 0.440014 2_4:+52575137 Msa0334280:CDS
GCTAAGGCTTTGGCCGAGAC+AGG 0.447175 2_4:+52575147 Msa0334280:CDS
AATCCTTCAGCAGTGAATCT+AGG 0.447263 2_4:-52575384 None:intergenic
AAGTCACCAAGGTTAGCCTT+TGG 0.450795 2_4:-52575757 None:intergenic
GCAAGAGCTGCAAAATCTGC+TGG 0.454061 2_4:+52575213 Msa0334280:CDS
AACAGTTCCTCCATGATAGA+TGG 0.454171 2_4:+52575811 Msa0334280:CDS
AGTGTTGGGACAAACCATCT+TGG 0.454856 2_4:+52575414 Msa0334280:CDS
GAAGTTAGTGAGAAGCTTGT+TGG 0.456735 2_4:+52576534 Msa0334280:CDS
AATCTGGTGTTTACTGGAGC+TGG 0.460304 2_4:+52576436 Msa0334280:CDS
TTTGCTGTCCTTGTATGCCT+TGG 0.462610 2_4:-52575851 None:intergenic
GGCTAACCTTGGTGACTTGA+GGG 0.462961 2_4:+52575762 Msa0334280:CDS
ACAATGATCAAGCGCTTTGA+AGG 0.464579 2_4:-52575489 None:intergenic
GGCAATGCAACCAGGGTAAA+GGG 0.470475 2_4:-52575944 None:intergenic
TGGCAATGCAACCAGGGTAA+AGG 0.479689 2_4:-52575945 None:intergenic
GTCACCAAGGTTAGCCTTTG+GGG 0.480313 2_4:-52575755 None:intergenic
GGTGAGGATTTGGTAACTGC+TGG 0.480958 2_4:-52575051 None:intergenic
TGATGGTGCCAAGGCATACA+AGG 0.481815 2_4:+52575843 Msa0334280:CDS
ACTGGTGCTTCATCTGGATT+AGG 0.482488 2_4:+52575114 Msa0334280:CDS
AAAATCTCCACCATCTATCA+TGG 0.483177 2_4:-52575821 None:intergenic
GGTAACACAAACACCTTGGC+TGG 0.486335 2_4:+52575724 Msa0334280:intron
GTGTTGGGACAAACCATCTT+GGG 0.488124 2_4:+52575415 Msa0334280:CDS
ATCATTGTCGGCTCAATCAC+AGG 0.490533 2_4:+52575504 Msa0334280:CDS
AAGGATTTGAGCTTAGTGTT+GGG 0.500150 2_4:+52575400 Msa0334280:CDS
TTTGGAATGGAGAAAGAAGC+AGG 0.504002 2_4:-52574168 None:intergenic
TGCCCAGGTCCTCAAGCAAA+AGG 0.504429 2_4:-52575455 None:intergenic
GGTGATGTACTTCTGGAATG+GGG 0.505411 2_4:-52576016 None:intergenic
CCTGTTGTGGCAATGCAACC+AGG 0.511779 2_4:-52575952 None:intergenic
TCATTGTCTGATTCTTTGAA+AGG 0.513909 2_4:+52574334 Msa0334280:CDS
GGCATTGCCATTGCCATGGA+AGG 0.515167 2_4:+52576606 Msa0334280:three_prime_UTR
CCAAAGCCTTAGCAGTGGCT+AGG 0.521349 2_4:-52575137 None:intergenic
AGCTGCAAAATCTGCTGGCA+TGG 0.524763 2_4:+52575218 Msa0334280:CDS
CTATGCTGAGTTAGAGGCAG+AGG 0.526185 2_4:+52576585 Msa0334280:three_prime_UTR
TGTTTACTTGCCAACTGCTA+AGG 0.526344 2_4:+52575359 Msa0334280:CDS
GAAGGATTTGAGCTTAGTGT+TGG 0.530033 2_4:+52575399 Msa0334280:CDS
AATCTAGGTTCCTTAGCAGT+TGG 0.534992 2_4:-52575369 None:intergenic
AGAGGCAAGTGATGTAGAGA+AGG 0.540407 2_4:+52576497 Msa0334280:CDS
AGGCTAACCTTGGTGACTTG+AGG 0.541106 2_4:+52575761 Msa0334280:CDS
AAAATCTGCTGGCATGGCTA+AGG 0.541326 2_4:+52575224 Msa0334280:CDS
GCATGTAATTATGGCTTGCA+GGG 0.542565 2_4:+52575176 Msa0334280:CDS
GAACCTAGATTCACTGCTGA+AGG 0.543294 2_4:+52575381 Msa0334280:CDS
AGCTGGAAAGAGACTTGCTC+AGG 0.548244 2_4:+52576062 Msa0334280:CDS
AAGGGTAGTCAGATTTGCCC+AGG 0.549484 2_4:-52575470 None:intergenic
ACATTTGCTTCCCTTTACCC+TGG 0.554504 2_4:+52575934 Msa0334280:CDS
TAGAGAAGGCTCGCAAGGTG+TGG 0.562086 2_4:+52576511 Msa0334280:CDS
AAAGGAAGTGTTGTGATCAC+TGG 0.566260 2_4:+52575096 Msa0334280:CDS
TGCTGTGAGGGCAGAGACAG+CGG 0.567342 2_4:+52575017 Msa0334280:CDS
AATGTTACACTTGATTTGTG+AGG 0.567869 2_4:-52574012 None:intergenic
ATGTTGGAGACTCTCAGCTT+AGG 0.570031 2_4:-52576562 None:intergenic
GTGATGTACTTCTGGAATGG+GGG 0.570625 2_4:-52576015 None:intergenic
GACTTGAGGGGACTTGCCGG+TGG 0.570686 2_4:+52575775 Msa0334280:CDS
AAAGATTGGTGCATCTCTCA+AGG 0.570795 2_4:+52574291 Msa0334280:CDS
CTCTTCTGCATTGAGGTGCA+AGG 0.571860 2_4:+52574366 Msa0334280:CDS
CAGAGGCATTGCCATTGCCA+TGG 0.576842 2_4:+52576602 Msa0334280:three_prime_UTR
ATGTGATTCCAGTTTCCTCA+TGG 0.579597 2_4:-52575915 None:intergenic
CTCTAACTCAGCATAGATGT+TGG 0.579633 2_4:-52576578 None:intergenic
TGATGTAGAGAAGGCTCGCA+AGG 0.581297 2_4:+52576506 Msa0334280:CDS
CTCCCTAAACAAGCCTGTTG+TGG 0.583907 2_4:-52575965 None:intergenic
GGCAAGAAAACATTGAGGAA+AGG 0.585122 2_4:+52575078 Msa0334280:CDS
CAGGCGATCTGAAATGCCGT+TGG 0.585323 2_4:+52575314 Msa0334280:CDS
AGAGAAGGCTCGCAAGGTGT+GGG 0.587119 2_4:+52576512 Msa0334280:CDS
AAAGAAGAAAATGCCCAAGA+TGG 0.589050 2_4:-52575428 None:intergenic
TACGTCTCAGAAGATGAAGC+TGG 0.589575 2_4:+52576045 Msa0334280:CDS
TTGGTTGGTATGAAAGGATG+TGG 0.592026 2_4:+52573961 None:intergenic
TTGGCGAACGCTGTCGAGAG+AGG 0.596671 2_4:-52575277 None:intergenic
AACAGGTAACACAAACACCT+TGG 0.602976 2_4:+52575720 Msa0334280:intron
GTTGAGCCCATTCAAGCCAC+CGG 0.607982 2_4:-52575791 None:intergenic
GGATTTGGTAACTGCTGGAG+TGG 0.616729 2_4:-52575046 None:intergenic
CAATGATCAAGCGCTTTGAA+GGG 0.619633 2_4:-52575488 None:intergenic
GAACGCTGTCGAGAGAGGAA+AGG 0.620107 2_4:-52575272 None:intergenic
GTTACCAAATCCTCACCTGA+TGG 0.621840 2_4:+52575057 Msa0334280:CDS
ATTAGGCCTAGCCACTGCTA+AGG 0.622076 2_4:+52575131 Msa0334280:CDS
TTCCAGAAGTACATCACCAA+AGG 0.629677 2_4:+52576021 Msa0334280:CDS
AGTTCCTCCATGATAGATGG+TGG 0.637689 2_4:+52575814 Msa0334280:CDS
CTGTTGTGGCAATGCAACCA+GGG 0.640819 2_4:-52575951 None:intergenic
GCTAACCTTGGTGACTTGAG+GGG 0.650668 2_4:+52575763 Msa0334280:CDS
TGAAAACCAGCTATCCCAAG+AGG 0.654717 2_4:+52576479 Msa0334280:CDS
CTCGGCCAAAGCCTTAGCAG+TGG 0.657245 2_4:-52575142 None:intergenic
TTGTTAACAAGCACATCCAA+CGG 0.658058 2_4:-52575330 None:intergenic
GAATGGAGAAAGAAGCAGGA+AGG 0.672736 2_4:-52574164 None:intergenic
TCACCAAGGTTAGCCTTTGG+GGG 0.673643 2_4:-52575754 None:intergenic
TGATGTACTTCTGGAATGGG+GGG 0.674664 2_4:-52576014 None:intergenic
ATCTCCACCATCTATCATGG+AGG 0.689487 2_4:-52575818 None:intergenic
CTGATGGCAAGAAAACATTG+AGG 0.691289 2_4:+52575073 Msa0334280:CDS
CAAGTCCCCTCAAGTCACCA+AGG 0.698872 2_4:-52575768 None:intergenic
GTTCCATAGACGATACCATG+AGG 0.740781 2_4:+52575900 Msa0334280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTTTTATAAGATATCA+AGG + chr2_4:52576202-52576221 Msa0334280:intron 10.0%
!! CTAAAAAAAAACTTGAAATT+AGG - chr2_4:52574417-52574436 None:intergenic 15.0%
!! ATTAAAAACACTCATAATTT+GGG - chr2_4:52574665-52574684 None:intergenic 15.0%
!! AATTAAAAACACTCATAATT+TGG - chr2_4:52574666-52574685 None:intergenic 15.0%
!! AGTGTTGTAATTAAAATTGT+GGG - chr2_4:52574063-52574082 None:intergenic 20.0%
!!! AAGTGTTGTAATTAAAATTG+TGG - chr2_4:52574064-52574083 None:intergenic 20.0%
!!! ACATTCATTTTCATATACTA+AGG + chr2_4:52574088-52574107 Msa0334280:five_prime_UTR 20.0%
!!! AATTTGGAAAATGTTTTTGT+AGG + chr2_4:52574267-52574286 Msa0334280:intron 20.0%
!!! ATTTGGAAAATGTTTTTGTA+GGG + chr2_4:52574268-52574287 Msa0334280:intron 20.0%
!! TGTATAAATGTAAAGAATTC+AGG + chr2_4:52574536-52574555 Msa0334280:intron 20.0%
!! AATAATCTGAAAGAAACTTA+TGG - chr2_4:52576188-52576207 None:intergenic 20.0%
!!! TAATTGTTGTTTTGTTAGAT+AGG + chr2_4:52576675-52576694 Msa0334280:three_prime_UTR 20.0%
!! CCTACATAAAAACAAAAAAA+AGG - chr2_4:52576703-52576722 None:intergenic 20.0%
!!! CCTTTTTTTTGTTTTTATGT+AGG + chr2_4:52576700-52576719 Msa0334280:three_prime_UTR 20.0%
!! AATAAAATCATTCAACTGTT+TGG + chr2_4:52576735-52576754 Msa0334280:three_prime_UTR 20.0%
!! AAACTTGAATAAGATTTAAG+AGG - chr2_4:52576806-52576825 None:intergenic 20.0%
! CATTGAAACTTAGCAAATTA+AGG - chr2_4:52574124-52574143 None:intergenic 25.0%
!!! CTTAATTTGCTAAGTTTCAA+TGG + chr2_4:52574122-52574141 Msa0334280:exon 25.0%
! TGATAATTGAGCTGAAAATT+TGG + chr2_4:52574251-52574270 Msa0334280:intron 25.0%
!! TGTGTTATTCAAAAGAATTG+AGG + chr2_4:52574622-52574641 Msa0334280:intron 25.0%
! TTATTCAAAAGAATTGAGGA+AGG + chr2_4:52574626-52574645 Msa0334280:intron 25.0%
!!! GTACTAATATTTTGAGGAAT+TGG - chr2_4:52574746-52574765 None:intergenic 25.0%
! TTCCTCAAAATATTAGTACA+TGG + chr2_4:52574747-52574766 Msa0334280:intron 25.0%
! TCCTCAAAATATTAGTACAT+GGG + chr2_4:52574748-52574767 Msa0334280:intron 25.0%
! TGATTGTGTATGAATTAAAC+AGG + chr2_4:52575703-52575722 Msa0334280:intron 25.0%
! GTATCTTCATTTCTCATAAA+TGG + chr2_4:52576369-52576388 Msa0334280:intron 25.0%
!! GATATCATTTTCATTCTTCT+AGG - chr2_4:52576642-52576661 None:intergenic 25.0%
!! AATGTTACACTTGATTTGTG+AGG - chr2_4:52574015-52574034 None:intergenic 30.0%
!! ATGTTTTTGTAGGGAAAGAT+TGG + chr2_4:52574277-52574296 Msa0334280:intron 30.0%
!!! CTCAAGGATTCAACATTTTT+TGG + chr2_4:52574307-52574326 Msa0334280:CDS 30.0%
TCATTGTCTGATTCTTTGAA+AGG + chr2_4:52574334-52574353 Msa0334280:CDS 30.0%
! ACCCATGTACTAATATTTTG+AGG - chr2_4:52574752-52574771 None:intergenic 30.0%
!!! GTTATACCCTTTATTTTTCG+TGG + chr2_4:52574935-52574954 Msa0334280:intron 30.0%
CAATGTCCACGAAAAATAAA+GGG - chr2_4:52574944-52574963 None:intergenic 30.0%
ACAATGTCCACGAAAAATAA+AGG - chr2_4:52574945-52574964 None:intergenic 30.0%
!! TTTTGTTTATCTCTACCAGA+GGG + chr2_4:52574975-52574994 Msa0334280:intron 30.0%
AGGAAAATGGCATGTAATTA+TGG + chr2_4:52575167-52575186 Msa0334280:CDS 30.0%
ACAGGTATAGTTCATTAGTA+TGG + chr2_4:52575522-52575541 Msa0334280:intron 30.0%
!!! AATGGTTTTTTACTGCTATC+AGG + chr2_4:52575565-52575584 Msa0334280:intron 30.0%
!!! GGGAATAGAGTTTTAAACAA+GGG - chr2_4:52575997-52576016 None:intergenic 30.0%
ATAAGTTGCTTATCTAGACA+GGG + chr2_4:52576289-52576308 Msa0334280:intron 30.0%
TAACAAAATCTGGTGTTTAC+TGG + chr2_4:52576430-52576449 Msa0334280:CDS 30.0%
TTCTTTCTCCATTCCAAAAG+AGG + chr2_4:52574173-52574192 Msa0334280:CDS 35.0%
!! AGAACAAACCTCTTTTGGAA+TGG - chr2_4:52574184-52574203 None:intergenic 35.0%
! GAACAAGAACAAACCTCTTT+TGG - chr2_4:52574189-52574208 None:intergenic 35.0%
!!! ATTTTAGCTCTTCTGCATTG+AGG + chr2_4:52574359-52574378 Msa0334280:CDS 35.0%
GGTAACTGAAAACAAAAGCT+TGG + chr2_4:52574387-52574406 Msa0334280:intron 35.0%
CGGTGAATTTGACAAAATCA+AGG - chr2_4:52574587-52574606 None:intergenic 35.0%
AAATTCACCGTCATTCCAAA+GGG + chr2_4:52574597-52574616 Msa0334280:intron 35.0%
TTTGAATAACACACACCCTT+TGG - chr2_4:52574615-52574634 None:intergenic 35.0%
TTCAAAAGAATTGAGGAAGG+AGG + chr2_4:52574629-52574648 Msa0334280:intron 35.0%
AGATGTGAGTGTTATGTTTG+TGG + chr2_4:52574698-52574717 Msa0334280:intron 35.0%
AATATACATATGCATGCGCA+CGG - chr2_4:52574904-52574923 None:intergenic 35.0%
!!! GTTTTGTTTATCTCTACCAG+AGG + chr2_4:52574974-52574993 Msa0334280:intron 35.0%
TTGTTAACAAGCACATCCAA+CGG - chr2_4:52575333-52575352 None:intergenic 35.0%
AAGGATTTGAGCTTAGTGTT+GGG + chr2_4:52575400-52575419 Msa0334280:CDS 35.0%
AAAGAAGAAAATGCCCAAGA+TGG - chr2_4:52575431-52575450 None:intergenic 35.0%
GTCTGTCAGTGGTTAAAAAA+TGG + chr2_4:52575547-52575566 Msa0334280:intron 35.0%
ATCAGTACAAAATGCAGCTA+AGG - chr2_4:52575687-52575706 None:intergenic 35.0%
AAAATCTCCACCATCTATCA+TGG - chr2_4:52575824-52575843 None:intergenic 35.0%
!!! ATAGATGGTGGAGATTTTGA+TGG + chr2_4:52575826-52575845 Msa0334280:CDS 35.0%
!!! GGGGAATAGAGTTTTAAACA+AGG - chr2_4:52575998-52576017 None:intergenic 35.0%
GATAAGTTGCTTATCTAGAC+AGG + chr2_4:52576288-52576307 Msa0334280:intron 35.0%
TAAGTTGCTTATCTAGACAG+GGG + chr2_4:52576290-52576309 Msa0334280:intron 35.0%
GCAAATAGCAATAACACTCA+TGG + chr2_4:52576312-52576331 Msa0334280:intron 35.0%
! CTGAAAAGTGCATGAATCAT+TGG + chr2_4:52576344-52576363 Msa0334280:intron 35.0%
!! TGGTCGTTTGTTTTCAATGT+AGG + chr2_4:52576389-52576408 Msa0334280:intron 35.0%
GATCCAAGCTTAACAAAATC+TGG + chr2_4:52576420-52576439 Msa0334280:CDS 35.0%
! ACACCAGATTTTGTTAAGCT+TGG - chr2_4:52576426-52576445 None:intergenic 35.0%
! TTTGGAATGGAGAAAGAAGC+AGG - chr2_4:52574171-52574190 None:intergenic 40.0%
AAAGATTGGTGCATCTCTCA+AGG + chr2_4:52574291-52574310 Msa0334280:CDS 40.0%
AGAATTCAGGTGAGTTTGTC+AGG + chr2_4:52574549-52574568 Msa0334280:intron 40.0%
CAAATTCACCGTCATTCCAA+AGG + chr2_4:52574596-52574615 Msa0334280:intron 40.0%
! TGGAAGCATAGCTCAGAAAA+TGG + chr2_4:52574718-52574737 Msa0334280:intron 40.0%
ATATACATATGCATGCGCAC+GGG - chr2_4:52574903-52574922 None:intergenic 40.0%
AGGGAATTGCGACAAAAAGT+CGG + chr2_4:52574994-52575013 Msa0334280:CDS 40.0%
! CTCAATGTTTTCTTGCCATC+AGG - chr2_4:52575075-52575094 None:intergenic 40.0%
CTGATGGCAAGAAAACATTG+AGG + chr2_4:52575073-52575092 Msa0334280:CDS 40.0%
GGCAAGAAAACATTGAGGAA+AGG + chr2_4:52575078-52575097 Msa0334280:CDS 40.0%
!! AAAGGAAGTGTTGTGATCAC+TGG + chr2_4:52575096-52575115 Msa0334280:CDS 40.0%
!!! TACATGCCATTTTCCTGTCT+CGG - chr2_4:52575163-52575182 None:intergenic 40.0%
! GCATGTAATTATGGCTTGCA+GGG + chr2_4:52575176-52575195 Msa0334280:CDS 40.0%
!! GCCAATTCGTTGATAACTTC+AGG + chr2_4:52575295-52575314 Msa0334280:CDS 40.0%
GCCTGAAGTTATCAACGAAT+TGG - chr2_4:52575299-52575318 None:intergenic 40.0%
TGTTTACTTGCCAACTGCTA+AGG + chr2_4:52575359-52575378 Msa0334280:CDS 40.0%
AATCTAGGTTCCTTAGCAGT+TGG - chr2_4:52575372-52575391 None:intergenic 40.0%
AATCCTTCAGCAGTGAATCT+AGG - chr2_4:52575387-52575406 None:intergenic 40.0%
GAAGGATTTGAGCTTAGTGT+TGG + chr2_4:52575399-52575418 Msa0334280:CDS 40.0%
! CAATGATCAAGCGCTTTGAA+GGG - chr2_4:52575491-52575510 None:intergenic 40.0%
ACAATGATCAAGCGCTTTGA+AGG - chr2_4:52575492-52575511 None:intergenic 40.0%
! TCAAAGCGCTTGATCATTGT+CGG + chr2_4:52575492-52575511 Msa0334280:CDS 40.0%
! CATCAATCGCAGTCACATTT+TGG - chr2_4:52575623-52575642 None:intergenic 40.0%
CTTGATATTGCAGAGAAACG+CGG - chr2_4:52575656-52575675 None:intergenic 40.0%
AACAGGTAACACAAACACCT+TGG + chr2_4:52575720-52575739 Msa0334280:intron 40.0%
AACAGTTCCTCCATGATAGA+TGG + chr2_4:52575811-52575830 Msa0334280:CDS 40.0%
TTTCCTCATGGTATCGTCTA+TGG - chr2_4:52575906-52575925 None:intergenic 40.0%
ATGTGATTCCAGTTTCCTCA+TGG - chr2_4:52575918-52575937 None:intergenic 40.0%
!! TGGTGATGTACTTCTGGAAT+GGG - chr2_4:52576020-52576039 None:intergenic 40.0%
!! TTGGTGATGTACTTCTGGAA+TGG - chr2_4:52576021-52576040 None:intergenic 40.0%
! TTCCAGAAGTACATCACCAA+AGG + chr2_4:52576021-52576040 Msa0334280:CDS 40.0%
ATGCACTTGTAAGACTGTTC+TGG + chr2_4:52576133-52576152 Msa0334280:intron 40.0%
GAAGTTAGTGAGAAGCTTGT+TGG + chr2_4:52576534-52576553 Msa0334280:CDS 40.0%
!! TAGTGAGAAGCTTGTTGGTT+TGG + chr2_4:52576539-52576558 Msa0334280:CDS 40.0%
CTCTAACTCAGCATAGATGT+TGG - chr2_4:52576581-52576600 None:intergenic 40.0%
CAACATCTATGCTGAGTTAG+AGG + chr2_4:52576579-52576598 Msa0334280:three_prime_UTR 40.0%
! TCATTTTCCTTCCATGGCAA+TGG - chr2_4:52576616-52576635 None:intergenic 40.0%
! AGGACATCATTTTCCTTCCA+TGG - chr2_4:52576622-52576641 None:intergenic 40.0%
GAATGGAGAAAGAAGCAGGA+AGG - chr2_4:52574167-52574186 None:intergenic 45.0%
AGGTGAGTTTGTCAGGATCA+CGG + chr2_4:52574556-52574575 Msa0334280:intron 45.0%
!! ACACACACCCTTTGGAATGA+CGG - chr2_4:52574607-52574626 None:intergenic 45.0%
! CTTTTTGTCGCAATTCCCTC+TGG - chr2_4:52574993-52575012 None:intergenic 45.0%
!! ACAAAAAGTCGGTGCTGTGA+GGG + chr2_4:52575005-52575024 Msa0334280:CDS 45.0%
GTTACCAAATCCTCACCTGA+TGG + chr2_4:52575057-52575076 Msa0334280:CDS 45.0%
! TGTTTTCTTGCCATCAGGTG+AGG - chr2_4:52575070-52575089 None:intergenic 45.0%
ACTGGTGCTTCATCTGGATT+AGG + chr2_4:52575114-52575133 Msa0334280:CDS 45.0%
! GGCATGTAATTATGGCTTGC+AGG + chr2_4:52575175-52575194 Msa0334280:CDS 45.0%
AAAATCTGCTGGCATGGCTA+AGG + chr2_4:52575224-52575243 Msa0334280:CDS 45.0%
GAACCTAGATTCACTGCTGA+AGG + chr2_4:52575381-52575400 Msa0334280:CDS 45.0%
! AGTGTTGGGACAAACCATCT+TGG + chr2_4:52575414-52575433 Msa0334280:CDS 45.0%
GTGTTGGGACAAACCATCTT+GGG + chr2_4:52575415-52575434 Msa0334280:CDS 45.0%
! TCTTTCACGCCTTTTGCTTG+AGG + chr2_4:52575446-52575465 Msa0334280:CDS 45.0%
!! ATCATTGTCGGCTCAATCAC+AGG + chr2_4:52575504-52575523 Msa0334280:CDS 45.0%
TTAGTATGGCTGTCTGTCAG+TGG + chr2_4:52575536-52575555 Msa0334280:intron 45.0%
CGCGTTTCTCTGCAATATCA+AGG + chr2_4:52575654-52575673 Msa0334280:intron 45.0%
!! AGTCACCAAGGTTAGCCTTT+GGG - chr2_4:52575759-52575778 None:intergenic 45.0%
!! AAGTCACCAAGGTTAGCCTT+TGG - chr2_4:52575760-52575779 None:intergenic 45.0%
AGTTCCTCCATGATAGATGG+TGG + chr2_4:52575814-52575833 Msa0334280:CDS 45.0%
ATCTCCACCATCTATCATGG+AGG - chr2_4:52575821-52575840 None:intergenic 45.0%
!!! TGGAGATTTTGATGGTGCCA+AGG + chr2_4:52575834-52575853 Msa0334280:CDS 45.0%
! TTTGCTGTCCTTGTATGCCT+TGG - chr2_4:52575854-52575873 None:intergenic 45.0%
GTTCCATAGACGATACCATG+AGG + chr2_4:52575900-52575919 Msa0334280:CDS 45.0%
AGACGATACCATGAGGAAAC+TGG + chr2_4:52575907-52575926 Msa0334280:CDS 45.0%
ACATTTGCTTCCCTTTACCC+TGG + chr2_4:52575934-52575953 Msa0334280:CDS 45.0%
! TTGCCACAACAGGCTTGTTT+AGG + chr2_4:52575962-52575981 Msa0334280:CDS 45.0%
! TGCCACAACAGGCTTGTTTA+GGG + chr2_4:52575963-52575982 Msa0334280:CDS 45.0%
!! TGATGTACTTCTGGAATGGG+GGG - chr2_4:52576017-52576036 None:intergenic 45.0%
!! GTGATGTACTTCTGGAATGG+GGG - chr2_4:52576018-52576037 None:intergenic 45.0%
!! GGTGATGTACTTCTGGAATG+GGG - chr2_4:52576019-52576038 None:intergenic 45.0%
!! AGCCTTTGGTGATGTACTTC+TGG - chr2_4:52576026-52576045 None:intergenic 45.0%
!! ATCTTCTGAGACGTAGCCTT+TGG - chr2_4:52576040-52576059 None:intergenic 45.0%
TACGTCTCAGAAGATGAAGC+TGG + chr2_4:52576045-52576064 Msa0334280:CDS 45.0%
AATCTGGTGTTTACTGGAGC+TGG + chr2_4:52576436-52576455 Msa0334280:CDS 45.0%
TGAAAACCAGCTATCCCAAG+AGG + chr2_4:52576479-52576498 Msa0334280:CDS 45.0%
CTCTACATCACTTGCCTCTT+GGG - chr2_4:52576496-52576515 None:intergenic 45.0%
TCTCTACATCACTTGCCTCT+TGG - chr2_4:52576497-52576516 None:intergenic 45.0%
AGAGGCAAGTGATGTAGAGA+AGG + chr2_4:52576497-52576516 Msa0334280:CDS 45.0%
ATGTTGGAGACTCTCAGCTT+AGG - chr2_4:52576565-52576584 None:intergenic 45.0%
CTCTTCTGCATTGAGGTGCA+AGG + chr2_4:52574366-52574385 Msa0334280:CDS 50.0%
!! GACAAAAAGTCGGTGCTGTG+AGG + chr2_4:52575004-52575023 Msa0334280:CDS 50.0%
! GGATTTGGTAACTGCTGGAG+TGG - chr2_4:52575049-52575068 None:intergenic 50.0%
! GGTGAGGATTTGGTAACTGC+TGG - chr2_4:52575054-52575073 None:intergenic 50.0%
CTTGCCATCAGGTGAGGATT+TGG - chr2_4:52575064-52575083 None:intergenic 50.0%
GTGATCACTGGTGCTTCATC+TGG + chr2_4:52575108-52575127 Msa0334280:CDS 50.0%
ATTAGGCCTAGCCACTGCTA+AGG + chr2_4:52575131-52575150 Msa0334280:CDS 50.0%
CTTTGGCCGAGACAGGAAAA+TGG + chr2_4:52575154-52575173 Msa0334280:CDS 50.0%
TTGCAGCTCTTGCAGCTTTG+AGG - chr2_4:52575206-52575225 None:intergenic 50.0%
GCAAGAGCTGCAAAATCTGC+TGG + chr2_4:52575213-52575232 Msa0334280:CDS 50.0%
AGCTGCAAAATCTGCTGGCA+TGG + chr2_4:52575218-52575237 Msa0334280:CDS 50.0%
AAGGGTAGTCAGATTTGCCC+AGG - chr2_4:52575473-52575492 None:intergenic 50.0%
GCTATCAGGTCGCAATGTCA+AGG + chr2_4:52575579-52575598 Msa0334280:intron 50.0%
GGTAACACAAACACCTTGGC+TGG + chr2_4:52575724-52575743 Msa0334280:intron 50.0%
!! TCACCAAGGTTAGCCTTTGG+GGG - chr2_4:52575757-52575776 None:intergenic 50.0%
!! GTCACCAAGGTTAGCCTTTG+GGG - chr2_4:52575758-52575777 None:intergenic 50.0%
! AGGCTAACCTTGGTGACTTG+AGG + chr2_4:52575761-52575780 Msa0334280:CDS 50.0%
! GGCTAACCTTGGTGACTTGA+GGG + chr2_4:52575762-52575781 Msa0334280:CDS 50.0%
! GCTAACCTTGGTGACTTGAG+GGG + chr2_4:52575763-52575782 Msa0334280:CDS 50.0%
! TGATGGTGCCAAGGCATACA+AGG + chr2_4:52575843-52575862 Msa0334280:CDS 50.0%
GGCAATGCAACCAGGGTAAA+GGG - chr2_4:52575947-52575966 None:intergenic 50.0%
TGGCAATGCAACCAGGGTAA+AGG - chr2_4:52575948-52575967 None:intergenic 50.0%
CTGTTGTGGCAATGCAACCA+GGG - chr2_4:52575954-52575973 None:intergenic 50.0%
CTCCCTAAACAAGCCTGTTG+TGG - chr2_4:52575968-52575987 None:intergenic 50.0%
! AGCTGGAAAGAGACTTGCTC+AGG + chr2_4:52576062-52576081 Msa0334280:CDS 50.0%
TGATGTAGAGAAGGCTCGCA+AGG + chr2_4:52576506-52576525 Msa0334280:CDS 50.0%
CTATGCTGAGTTAGAGGCAG+AGG + chr2_4:52576585-52576604 Msa0334280:three_prime_UTR 50.0%
CCAAAGCCTTAGCAGTGGCT+AGG - chr2_4:52575140-52575159 None:intergenic 55.0%
CCTAGCCACTGCTAAGGCTT+TGG + chr2_4:52575137-52575156 Msa0334280:CDS 55.0%
GAACGCTGTCGAGAGAGGAA+AGG - chr2_4:52575275-52575294 None:intergenic 55.0%
! CAGGCGATCTGAAATGCCGT+TGG + chr2_4:52575314-52575333 Msa0334280:CDS 55.0%
! ACGCCTTTTGCTTGAGGACC+TGG + chr2_4:52575452-52575471 Msa0334280:CDS 55.0%
! CGCCTTTTGCTTGAGGACCT+GGG + chr2_4:52575453-52575472 Msa0334280:CDS 55.0%
TGCCCAGGTCCTCAAGCAAA+AGG - chr2_4:52575458-52575477 None:intergenic 55.0%
! TGGGGGTACATTTCCAGCCA+AGG - chr2_4:52575740-52575759 None:intergenic 55.0%
GGCTGGAAATGTACCCCCAA+AGG + chr2_4:52575741-52575760 Msa0334280:CDS 55.0%
GTACCCCCAAAGGCTAACCT+TGG + chr2_4:52575751-52575770 Msa0334280:CDS 55.0%
CAAGTCCCCTCAAGTCACCA+AGG - chr2_4:52575771-52575790 None:intergenic 55.0%
GACTTGCCGGTGGCTTGAAT+GGG + chr2_4:52575785-52575804 Msa0334280:CDS 55.0%
GTTGAGCCCATTCAAGCCAC+CGG - chr2_4:52575794-52575813 None:intergenic 55.0%
CCTGTTGTGGCAATGCAACC+AGG - chr2_4:52575955-52575974 None:intergenic 55.0%
CCTGGTTGCATTGCCACAAC+AGG + chr2_4:52575952-52575971 Msa0334280:CDS 55.0%
CACTTGCCTCTTGGGATAGC+TGG - chr2_4:52576488-52576507 None:intergenic 55.0%
TAGAGAAGGCTCGCAAGGTG+TGG + chr2_4:52576511-52576530 Msa0334280:CDS 55.0%
AGAGAAGGCTCGCAAGGTGT+GGG + chr2_4:52576512-52576531 Msa0334280:CDS 55.0%
!! CAGAGGCATTGCCATTGCCA+TGG + chr2_4:52576602-52576621 Msa0334280:three_prime_UTR 55.0%
GGCATTGCCATTGCCATGGA+AGG + chr2_4:52576606-52576625 Msa0334280:three_prime_UTR 55.0%
TGCTGTGAGGGCAGAGACAG+CGG + chr2_4:52575017-52575036 Msa0334280:CDS 60.0%
CTCGGCCAAAGCCTTAGCAG+TGG - chr2_4:52575145-52575164 None:intergenic 60.0%
! GCTAAGGCTTTGGCCGAGAC+AGG + chr2_4:52575147-52575166 Msa0334280:CDS 60.0%
TTGGCGAACGCTGTCGAGAG+AGG - chr2_4:52575280-52575299 None:intergenic 60.0%
GGTGACTTGAGGGGACTTGC+CGG + chr2_4:52575772-52575791 Msa0334280:CDS 60.0%
GGACTTGCCGGTGGCTTGAA+TGG + chr2_4:52575784-52575803 Msa0334280:CDS 60.0%
GACTTGAGGGGACTTGCCGG+TGG + chr2_4:52575775-52575794 Msa0334280:CDS 65.0%
TGCATGCGCACGGGTCGCGC+TGG - chr2_4:52574894-52574913 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 52573971 52576836 52573971 ID=Msa0334280;Name=Msa0334280
chr2_4 mRNA 52573971 52576836 52573971 ID=Msa0334280-mRNA-1;Parent=Msa0334280;Name=Msa0334280-mRNA-1;_AED=0.00;_eAED=0.00;_QI=170|1|1|1|1|1|5|270|399
chr2_4 exon 52573971 52574194 52573971 ID=Msa0334280-mRNA-1:exon:15787;Parent=Msa0334280-mRNA-1
chr2_4 exon 52574289 52574387 52574289 ID=Msa0334280-mRNA-1:exon:15788;Parent=Msa0334280-mRNA-1
chr2_4 exon 52574994 52575525 52574994 ID=Msa0334280-mRNA-1:exon:15789;Parent=Msa0334280-mRNA-1
chr2_4 exon 52575725 52576083 52575725 ID=Msa0334280-mRNA-1:exon:15790;Parent=Msa0334280-mRNA-1
chr2_4 exon 52576411 52576836 52576411 ID=Msa0334280-mRNA-1:exon:15791;Parent=Msa0334280-mRNA-1
chr2_4 five_prime_UTR 52573971 52574140 52573971 ID=Msa0334280-mRNA-1:five_prime_utr;Parent=Msa0334280-mRNA-1
chr2_4 CDS 52574141 52574194 52574141 ID=Msa0334280-mRNA-1:cds;Parent=Msa0334280-mRNA-1
chr2_4 CDS 52574289 52574387 52574289 ID=Msa0334280-mRNA-1:cds;Parent=Msa0334280-mRNA-1
chr2_4 CDS 52574994 52575525 52574994 ID=Msa0334280-mRNA-1:cds;Parent=Msa0334280-mRNA-1
chr2_4 CDS 52575725 52576083 52575725 ID=Msa0334280-mRNA-1:cds;Parent=Msa0334280-mRNA-1
chr2_4 CDS 52576411 52576566 52576411 ID=Msa0334280-mRNA-1:cds;Parent=Msa0334280-mRNA-1
chr2_4 three_prime_UTR 52576567 52576836 52576567 ID=Msa0334280-mRNA-1:three_prime_utr;Parent=Msa0334280-mRNA-1
Gene Sequence

>Msa0334280

ATGGCTCTTCAAGCTACTTCTTGCCTTCCTGCTTCTTTCTCCATTCCAAAAGAGGGAAAGATTGGTGCATCTCTCAAGGATTCAACATTTTTTGGTGTTTCATTGTCTGATTCTTTGAAAGGTGATTTTAGCTCTTCTGCATTGAGGTGCAAGAGGGAATTGCGACAAAAAGTCGGTGCTGTGAGGGCAGAGACAGCGGCTACAGCCACTCCAGCAGTTACCAAATCCTCACCTGATGGCAAGAAAACATTGAGGAAAGGAAGTGTTGTGATCACTGGTGCTTCATCTGGATTAGGCCTAGCCACTGCTAAGGCTTTGGCCGAGACAGGAAAATGGCATGTAATTATGGCTTGCAGGGATTTCCTCAAAGCTGCAAGAGCTGCAAAATCTGCTGGCATGGCTAAGGAAAACTACACAATCATGCACTTAGACCTTTCCTCTCTCGACAGCGTTCGCCAATTCGTTGATAACTTCAGGCGATCTGAAATGCCGTTGGATGTGCTTGTTAACAATGCTGCTGTTTACTTGCCAACTGCTAAGGAACCTAGATTCACTGCTGAAGGATTTGAGCTTAGTGTTGGGACAAACCATCTTGGGCATTTTCTTCTTTCACGCCTTTTGCTTGAGGACCTGGGCAAATCTGACTACCCTTCAAAGCGCTTGATCATTGTCGGCTCAATCACAGGTAACACAAACACCTTGGCTGGAAATGTACCCCCAAAGGCTAACCTTGGTGACTTGAGGGGACTTGCCGGTGGCTTGAATGGGCTCAACAGTTCCTCCATGATAGATGGTGGAGATTTTGATGGTGCCAAGGCATACAAGGACAGCAAAGTGTGTAACATGCTCACAATGCAAGAGTTCCATAGACGATACCATGAGGAAACTGGAATCACATTTGCTTCCCTTTACCCTGGTTGCATTGCCACAACAGGCTTGTTTAGGGAGCACATTCCCTTGTTTAAAACTCTATTCCCCCCATTCCAGAAGTACATCACCAAAGGCTACGTCTCAGAAGATGAAGCTGGAAAGAGACTTGCTCAGGTTGTAAGTGATCCAAGCTTAACAAAATCTGGTGTTTACTGGAGCTGGAATAAAGCTTCTGCTTCATTTGAAAACCAGCTATCCCAAGAGGCAAGTGATGTAGAGAAGGCTCGCAAGGTGTGGGAAGTTAGTGAGAAGCTTGTTGGTTTGGCCTAA

Protein sequence

>Msa0334280

MALQATSCLPASFSIPKEGKIGASLKDSTFFGVSLSDSLKGDFSSSALRCKRELRQKVGAVRAETAATATPAVTKSSPDGKKTLRKGSVVITGASSGLGLATAKALAETGKWHVIMACRDFLKAARAAKSAGMAKENYTIMHLDLSSLDSVRQFVDNFRRSEMPLDVLVNNAAVYLPTAKEPRFTAEGFELSVGTNHLGHFLLSRLLLEDLGKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFKTLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKASASFENQLSQEASDVEKARKVWEVSEKLVGLA*