Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469060 | XP_003601878.1 | 95.817 | 526 | 20 | 2 | 1 | 526 | 1 | 524 | 0.0 | 1014 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469060 | sp|O65001|TE1_MAIZE | 66.298 | 181 | 46 | 3 | 310 | 476 | 405 | 584 | 1.32e-74 | 251 |
| Msa0469060 | sp|O65001|TE1_MAIZE | 29.936 | 314 | 146 | 11 | 2 | 263 | 9 | 300 | 1.73e-27 | 120 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469060 | G7J336 | 95.817 | 526 | 20 | 2 | 1 | 526 | 1 | 524 | 0.0 | 1014 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004590 | Msa0469060 | 0.823353 | 1.450314e-53 | -8.615850e-47 |
| Msa0006840 | Msa0469060 | 0.852836 | 3.553249e-61 | -8.615850e-47 |
| Msa0013270 | Msa0469060 | 0.810461 | 1.139706e-50 | -8.615850e-47 |
| Msa0017710 | Msa0469060 | 0.829082 | 6.279186e-55 | -8.615850e-47 |
| Msa0018920 | Msa0469060 | 0.800454 | 1.430137e-48 | -8.615850e-47 |
| Msa0019830 | Msa0469060 | 0.805132 | 1.547537e-49 | -8.615850e-47 |
| Msa0030760 | Msa0469060 | -0.805539 | 1.271474e-49 | -8.615850e-47 |
| Msa0036810 | Msa0469060 | 0.824184 | 9.261554e-54 | -8.615850e-47 |
| Msa0039750 | Msa0469060 | 0.808806 | 2.584090e-50 | -8.615850e-47 |
| Msa0044780 | Msa0469060 | -0.819075 | 1.404826e-52 | -8.615850e-47 |
| Msa0045620 | Msa0469060 | 0.833430 | 5.358915e-56 | -8.615850e-47 |
| Msa0047560 | Msa0469060 | -0.804657 | 1.944463e-49 | -8.615850e-47 |
| Msa0050530 | Msa0469060 | 0.852754 | 3.749919e-61 | -8.615850e-47 |
| Msa0073270 | Msa0469060 | 0.810203 | 1.295350e-50 | -8.615850e-47 |
| Msa0075840 | Msa0469060 | 0.805498 | 1.296712e-49 | -8.615850e-47 |
| Msa0078160 | Msa0469060 | -0.805502 | 1.293958e-49 | -8.615850e-47 |
| Msa0080370 | Msa0469060 | 0.828615 | 8.145535e-55 | -8.615850e-47 |
| Msa0080440 | Msa0469060 | 0.817182 | 3.765761e-52 | -8.615850e-47 |
| Msa0089540 | Msa0469060 | 0.819645 | 1.041489e-52 | -8.615850e-47 |
| Msa0094180 | Msa0469060 | 0.828936 | 6.814688e-55 | -8.615850e-47 |
| Msa0100600 | Msa0469060 | 0.829476 | 5.038382e-55 | -8.615850e-47 |
| Msa0100890 | Msa0469060 | 0.871851 | 4.985086e-67 | -8.615850e-47 |
| Msa0102920 | Msa0469060 | 0.830905 | 2.256370e-55 | -8.615850e-47 |
| Msa0106540 | Msa0469060 | 0.816958 | 4.228127e-52 | -8.615850e-47 |
| Msa0121320 | Msa0469060 | 0.804998 | 1.650640e-49 | -8.615850e-47 |
| Msa0121470 | Msa0469060 | 0.812190 | 4.801771e-51 | -8.615850e-47 |
| Msa0121490 | Msa0469060 | 0.811567 | 6.564648e-51 | -8.615850e-47 |
| Msa0125590 | Msa0469060 | 0.827569 | 1.455546e-54 | -8.615850e-47 |
| Msa0131810 | Msa0469060 | 0.837365 | 5.427021e-57 | -8.615850e-47 |
| Msa0132080 | Msa0469060 | -0.830534 | 2.782003e-55 | -8.615850e-47 |
| Msa0136690 | Msa0469060 | 0.803542 | 3.317061e-49 | -8.615850e-47 |
| Msa0147680 | Msa0469060 | 0.824370 | 8.373335e-54 | -8.615850e-47 |
| Msa0152190 | Msa0469060 | -0.804947 | 1.691143e-49 | -8.615850e-47 |
| Msa0158760 | Msa0469060 | 0.819062 | 1.414537e-52 | -8.615850e-47 |
| Msa0161960 | Msa0469060 | 0.802078 | 6.654006e-49 | -8.615850e-47 |
| Msa0166180 | Msa0469060 | 0.809161 | 2.169353e-50 | -8.615850e-47 |
| Msa0168380 | Msa0469060 | 0.841495 | 4.589029e-58 | -8.615850e-47 |
| Msa0173250 | Msa0469060 | 0.818899 | 1.540550e-52 | -8.615850e-47 |
| Msa0186510 | Msa0469060 | -0.806099 | 9.694969e-50 | -8.615850e-47 |
| Msa0192050 | Msa0469060 | 0.808109 | 3.639499e-50 | -8.615850e-47 |
| Msa0204970 | Msa0469060 | 0.816564 | 5.181786e-52 | -8.615850e-47 |
| Msa0206370 | Msa0469060 | 0.822700 | 2.058661e-53 | -8.615850e-47 |
| Msa0211460 | Msa0469060 | 0.824907 | 6.257320e-54 | -8.615850e-47 |
| Msa0219840 | Msa0469060 | 0.815514 | 8.891214e-52 | -8.615850e-47 |
| Msa0221180 | Msa0469060 | 0.818642 | 1.762351e-52 | -8.615850e-47 |
| Msa0221460 | Msa0469060 | -0.812343 | 4.446474e-51 | -8.615850e-47 |
| Msa0225800 | Msa0469060 | 0.842959 | 1.880037e-58 | -8.615850e-47 |
| Msa0227970 | Msa0469060 | -0.802010 | 6.872597e-49 | -8.615850e-47 |
| Msa0230920 | Msa0469060 | 0.805322 | 1.411644e-49 | -8.615850e-47 |
| Msa0235080 | Msa0469060 | 0.815057 | 1.123724e-51 | -8.615850e-47 |
| Msa0371350 | Msa0469060 | -0.835085 | 2.060660e-56 | -8.615850e-47 |
| Msa0372100 | Msa0469060 | 0.812517 | 4.074581e-51 | -8.615850e-47 |
| Msa0373170 | Msa0469060 | 0.808047 | 3.752317e-50 | -8.615850e-47 |
| Msa0385030 | Msa0469060 | 0.814105 | 1.824742e-51 | -8.615850e-47 |
| Msa0388250 | Msa0469060 | 0.853396 | 2.456479e-61 | -8.615850e-47 |
| Msa0412580 | Msa0469060 | -0.800448 | 1.434395e-48 | -8.615850e-47 |
| Msa0416210 | Msa0469060 | 0.834847 | 2.364621e-56 | -8.615850e-47 |
| Msa0419420 | Msa0469060 | -0.836907 | 7.106426e-57 | -8.615850e-47 |
| Msa0422690 | Msa0469060 | 0.858072 | 1.058790e-62 | -8.615850e-47 |
| Msa0422820 | Msa0469060 | 0.877260 | 7.247509e-69 | -8.615850e-47 |
| Msa0422900 | Msa0469060 | 0.870274 | 1.651346e-66 | -8.615850e-47 |
| Msa0429970 | Msa0469060 | 0.830782 | 2.419224e-55 | -8.615850e-47 |
| Msa0432200 | Msa0469060 | 0.800740 | 1.250534e-48 | -8.615850e-47 |
| Msa0433630 | Msa0469060 | 0.827687 | 1.363235e-54 | -8.615850e-47 |
| Msa0434090 | Msa0469060 | 0.801654 | 8.132929e-49 | -8.615850e-47 |
| Msa0436100 | Msa0469060 | 0.806041 | 9.972711e-50 | -8.615850e-47 |
| Msa0437480 | Msa0469060 | 0.805824 | 1.107483e-49 | -8.615850e-47 |
| Msa0444200 | Msa0469060 | 0.802029 | 6.809379e-49 | -8.615850e-47 |
| Msa0457070 | Msa0469060 | -0.804207 | 2.413375e-49 | -8.615850e-47 |
| Msa0467690 | Msa0469060 | 0.807313 | 5.372372e-50 | -8.615850e-47 |
| Msa0469060 | Msa0471130 | -0.803421 | 3.514153e-49 | -8.615850e-47 |
| Msa0469060 | Msa0477900 | 0.805449 | 1.327740e-49 | -8.615850e-47 |
| Msa0469060 | Msa0479480 | 0.821383 | 4.157632e-53 | -8.615850e-47 |
| Msa0469060 | Msa0506750 | 0.812334 | 4.466351e-51 | -8.615850e-47 |
| Msa0469060 | Msa0514020 | 0.803513 | 3.363954e-49 | -8.615850e-47 |
| Msa0469060 | Msa0521510 | 0.820041 | 8.456152e-53 | -8.615850e-47 |
| Msa0469060 | Msa0521530 | 0.803760 | 2.988541e-49 | -8.615850e-47 |
| Msa0469060 | Msa0525180 | -0.801384 | 9.237404e-49 | -8.615850e-47 |
| Msa0469060 | Msa0527850 | 0.819526 | 1.108791e-52 | -8.615850e-47 |
| Msa0469060 | Msa0528310 | 0.850721 | 1.413584e-60 | -8.615850e-47 |
| Msa0469060 | Msa0530660 | 0.812024 | 5.219209e-51 | -8.615850e-47 |
| Msa0469060 | Msa0541740 | 0.801422 | 9.074188e-49 | -8.615850e-47 |
| Msa0469060 | Msa0541880 | 0.804169 | 2.457154e-49 | -8.615850e-47 |
| Msa0469060 | Msa0541940 | 0.817548 | 3.114198e-52 | -8.615850e-47 |
| Msa0469060 | Msa0566090 | -0.801079 | 1.066621e-48 | -8.615850e-47 |
| Msa0469060 | Msa0567570 | 0.816699 | 4.833545e-52 | -8.615850e-47 |
| Msa0469060 | Msa0568460 | -0.834080 | 3.685535e-56 | -8.615850e-47 |
| Msa0469060 | Msa0572830 | 0.809722 | 1.644281e-50 | -8.615850e-47 |
| Msa0469060 | Msa0575950 | 0.824570 | 7.513566e-54 | -8.615850e-47 |
| Msa0469060 | Msa0576320 | 0.802141 | 6.456878e-49 | -8.615850e-47 |
| Msa0469060 | Msa0576330 | 0.808734 | 2.677831e-50 | -8.615850e-47 |
| Msa0469060 | Msa0582460 | 0.833213 | 6.067731e-56 | -8.615850e-47 |
| Msa0469060 | Msa0586200 | 0.821567 | 3.769726e-53 | -8.615850e-47 |
| Msa0469060 | Msa0587180 | 0.818035 | 2.418002e-52 | -8.615850e-47 |
| Msa0469060 | Msa0588500 | 0.834210 | 3.418222e-56 | -8.615850e-47 |
| Msa0469060 | Msa0590000 | 0.813370 | 2.649516e-51 | -8.615850e-47 |
| Msa0469060 | Msa0605520 | 0.834776 | 2.464109e-56 | -8.615850e-47 |
| Msa0469060 | Msa0606150 | 0.815955 | 7.089770e-52 | -8.615850e-47 |
| Msa0469060 | Msa0612880 | -0.826388 | 2.787566e-54 | -8.615850e-47 |
| Msa0469060 | Msa0614960 | 0.800741 | 1.250078e-48 | -8.615850e-47 |
| Msa0469060 | Msa0618840 | 0.805999 | 1.017679e-49 | -8.615850e-47 |
| Msa0469060 | Msa0618990 | 0.809820 | 1.566292e-50 | -8.615850e-47 |
| Msa0469060 | Msa0619300 | 0.811762 | 5.954118e-51 | -8.615850e-47 |
| Msa0469060 | Msa0623310 | 0.829638 | 4.602961e-55 | -8.615850e-47 |
| Msa0469060 | Msa0626980 | 0.806772 | 6.991686e-50 | -8.615850e-47 |
| Msa0469060 | Msa0627360 | 0.814476 | 1.510933e-51 | -8.615850e-47 |
| Msa0469060 | Msa0630440 | 0.819842 | 9.392503e-53 | -8.615850e-47 |
| Msa0469060 | Msa0638300 | -0.807509 | 4.883447e-50 | -8.615850e-47 |
| Msa0469060 | Msa0647440 | 0.820763 | 5.776801e-53 | -8.615850e-47 |
| Msa0469060 | Msa0659020 | -0.809542 | 1.796905e-50 | -8.615850e-47 |
| Msa0469060 | Msa0660090 | 0.808096 | 3.663061e-50 | -8.615850e-47 |
| Msa0469060 | Msa0661480 | 0.825347 | 4.925773e-54 | -8.615850e-47 |
| Msa0469060 | Msa0663290 | 0.835867 | 1.306579e-56 | -8.615850e-47 |
| Msa0469060 | Msa0664070 | 0.835581 | 1.543622e-56 | -8.615850e-47 |
| Msa0469060 | Msa0673940 | 0.832623 | 8.503815e-56 | -8.615850e-47 |
| Msa0469060 | Msa0685390 | -0.846408 | 2.212832e-59 | -8.615850e-47 |
| Msa0469060 | Msa0685610 | 0.819512 | 1.116919e-52 | -8.615850e-47 |
| Msa0469060 | Msa0689830 | 0.812905 | 3.350311e-51 | -8.615850e-47 |
| Msa0469060 | Msa0690320 | 0.803332 | 3.667536e-49 | -8.615850e-47 |
| Msa0469060 | Msa0702690 | -0.808081 | 3.689709e-50 | -8.615850e-47 |
| Msa0469060 | Msa0704690 | 0.833302 | 5.766428e-56 | -8.615850e-47 |
| Msa0469060 | Msa0708020 | 0.834441 | 2.992566e-56 | -8.615850e-47 |
| Msa0469060 | Msa0708980 | 0.812044 | 5.167344e-51 | -8.615850e-47 |
| Msa0469060 | Msa0714230 | -0.802890 | 4.525699e-49 | -8.615850e-47 |
| Msa0469060 | Msa0726520 | 0.825906 | 3.630924e-54 | -8.615850e-47 |
| Msa0469060 | Msa0732970 | 0.814482 | 1.506145e-51 | -8.615850e-47 |
| Msa0469060 | Msa0745140 | 0.814005 | 1.919770e-51 | -8.615850e-47 |
| Msa0469060 | Msa0750520 | 0.801060 | 1.076098e-48 | -8.615850e-47 |
| Msa0469060 | Msa0751720 | 0.858527 | 7.747100e-63 | -8.615850e-47 |
| Msa0469060 | Msa0761830 | 0.848223 | 7.028333e-60 | -8.615850e-47 |
| Msa0469060 | Msa0766860 | 0.844699 | 6.430437e-59 | -8.615850e-47 |
| Msa0469060 | Msa0771910 | 0.800540 | 1.374099e-48 | -8.615850e-47 |
| Msa0469060 | Msa0773960 | 0.811122 | 8.200092e-51 | -8.615850e-47 |
| Msa0469060 | Msa0776640 | 0.815654 | 8.277150e-52 | -8.615850e-47 |
| Msa0469060 | Msa0786600 | -0.802446 | 5.589814e-49 | -8.615850e-47 |
| Msa0469060 | Msa0792410 | 0.811490 | 6.821758e-51 | -8.615850e-47 |
| Msa0469060 | Msa0804170 | 0.842048 | 3.279798e-58 | -8.615850e-47 |
| Msa0469060 | Msa0822680 | -0.813059 | 3.100056e-51 | -8.615850e-47 |
| Msa0469060 | Msa0825920 | 0.822867 | 1.882675e-53 | -8.615850e-47 |
| Msa0469060 | Msa0828350 | 0.803718 | 3.049288e-49 | -8.615850e-47 |
| Msa0469060 | Msa0831820 | 0.840727 | 7.303012e-58 | -8.615850e-47 |
| Msa0469060 | Msa0837680 | 0.802558 | 5.300743e-49 | -8.615850e-47 |
| Msa0469060 | Msa0842180 | 0.822788 | 1.963925e-53 | -8.615850e-47 |
| Msa0469060 | Msa0846900 | 0.832140 | 1.120438e-55 | -8.615850e-47 |
| Msa0469060 | Msa0847140 | 0.801969 | 7.006255e-49 | -8.615850e-47 |
| Msa0469060 | Msa0852890 | 0.802708 | 4.934475e-49 | -8.615850e-47 |
| Msa0469060 | Msa0871420 | 0.815857 | 7.456208e-52 | -8.615850e-47 |
| Msa0469060 | Msa0876630 | 0.832209 | 1.076820e-55 | -8.615850e-47 |
| Msa0469060 | Msa0900090 | 0.807457 | 5.009092e-50 | -8.615850e-47 |
| Msa0469060 | Msa0926310 | 0.810801 | 9.621835e-51 | -8.615850e-47 |
| Msa0469060 | Msa0930040 | 0.800254 | 1.570992e-48 | -8.615850e-47 |
| Msa0469060 | Msa0936630 | 0.804377 | 2.224819e-49 | -8.615850e-47 |
| Msa0469060 | Msa0941150 | -0.826605 | 2.475128e-54 | -8.615850e-47 |
| Msa0469060 | Msa0945900 | 0.804867 | 1.757648e-49 | -8.615850e-47 |
| Msa0469060 | Msa0978980 | 0.841125 | 5.744735e-58 | -8.615850e-47 |
| Msa0469060 | Msa1000780 | 0.807117 | 5.912011e-50 | -8.615850e-47 |
| Msa0469060 | Msa1008850 | 0.847760 | 9.428598e-60 | -8.615850e-47 |
| Msa0469060 | Msa1021560 | 0.811941 | 5.441515e-51 | -8.615850e-47 |
| Msa0469060 | Msa1025200 | 0.825419 | 4.735291e-54 | -8.615850e-47 |
| Msa0469060 | Msa1025220 | 0.818900 | 1.540004e-52 | -8.615850e-47 |
| Msa0469060 | Msa1026710 | 0.829904 | 3.964231e-55 | -8.615850e-47 |
| Msa0469060 | Msa1036590 | 0.802249 | 6.137060e-49 | -8.615850e-47 |
| Msa0469060 | Msa1050260 | 0.843694 | 1.196813e-58 | -8.615850e-47 |
| Msa0469060 | Msa1057620 | -0.816271 | 6.028033e-52 | -8.615850e-47 |
| Msa0469060 | Msa1071410 | 0.806607 | 7.576760e-50 | -8.615850e-47 |
| Msa0469060 | Msa1076900 | 0.802994 | 4.307707e-49 | -8.615850e-47 |
| Msa0469060 | Msa1078590 | -0.800930 | 1.143873e-48 | -8.615850e-47 |
| Msa0469060 | Msa1078860 | 0.827010 | 1.980519e-54 | -8.615850e-47 |
| Msa0469060 | Msa1083630 | 0.813658 | 2.290064e-51 | -8.615850e-47 |
| Msa0469060 | Msa1085560 | 0.800320 | 1.523210e-48 | -8.615850e-47 |
| Msa0469060 | Msa1085680 | 0.810095 | 1.366764e-50 | -8.615850e-47 |
| Msa0469060 | Msa1088740 | -0.809236 | 2.090877e-50 | -8.615850e-47 |
| Msa0469060 | Msa1105540 | 0.809469 | 1.863251e-50 | -8.615850e-47 |
| Msa0469060 | Msa1127200 | 0.814527 | 1.472042e-51 | -8.615850e-47 |
| Msa0469060 | Msa1128620 | 0.802262 | 6.098862e-49 | -8.615850e-47 |
| Msa0469060 | Msa1130770 | 0.820383 | 7.062314e-53 | -8.615850e-47 |
| Msa0469060 | Msa1136970 | -0.820147 | 7.996538e-53 | -8.615850e-47 |
| Msa0469060 | Msa1138800 | 0.841766 | 3.894086e-58 | -8.615850e-47 |
| Msa0469060 | Msa1144990 | 0.845602 | 3.666079e-59 | -8.615850e-47 |
| Msa0469060 | Msa1148930 | 0.803384 | 3.576547e-49 | -8.615850e-47 |
| Msa0469060 | Msa1154630 | 0.810826 | 9.501004e-51 | -8.615850e-47 |
| Msa0469060 | Msa1162360 | 0.809562 | 1.779811e-50 | -8.615850e-47 |
| Msa0469060 | Msa1165460 | 0.803724 | 3.040494e-49 | -8.615850e-47 |
| Msa0469060 | Msa1169690 | 0.810779 | 9.727736e-51 | -8.615850e-47 |
| Msa0469060 | Msa1183910 | 0.833706 | 4.570854e-56 | -8.615850e-47 |
| Msa0469060 | Msa1190350 | -0.808640 | 2.804069e-50 | -8.615850e-47 |
| Msa0469060 | Msa1191530 | -0.819199 | 1.316472e-52 | -8.615850e-47 |
| Msa0469060 | Msa1192360 | 0.805016 | 1.636331e-49 | -8.615850e-47 |
| Msa0469060 | Msa1201170 | 0.801467 | 8.880724e-49 | -8.615850e-47 |
| Msa0469060 | Msa1205270 | -0.803828 | 2.893096e-49 | -8.615850e-47 |
| Msa0469060 | Msa1206040 | 0.839607 | 1.432277e-57 | -8.615850e-47 |
| Msa0469060 | Msa1217890 | 0.856086 | 4.079149e-62 | -8.615850e-47 |
| Msa0469060 | Msa1220720 | 0.843672 | 1.213589e-58 | -8.615850e-47 |
| Msa0469060 | Msa1223540 | 0.802100 | 6.584111e-49 | -8.615850e-47 |
| Msa0469060 | Msa1243630 | -0.824432 | 8.097690e-54 | -8.615850e-47 |
| Msa0469060 | Msa1244220 | -0.820946 | 5.243265e-53 | -8.615850e-47 |
| Msa0469060 | Msa1255030 | -0.800939 | 1.139110e-48 | -8.615850e-47 |
| Msa0469060 | Msa1255710 | 0.805440 | 1.333435e-49 | -8.615850e-47 |
| Msa0469060 | Msa1265570 | 0.855272 | 7.050962e-62 | -8.615850e-47 |
| Msa0469060 | Msa1266120 | -0.825774 | 3.901898e-54 | -8.615850e-47 |
| Msa0469060 | Msa1273320 | 0.806767 | 7.009022e-50 | -8.615850e-47 |
| Msa0469060 | Msa1278030 | 0.813046 | 3.120866e-51 | -8.615850e-47 |
| Msa0469060 | Msa1283980 | 0.806858 | 6.706512e-50 | -8.615850e-47 |
| Msa0469060 | Msa1286860 | -0.801280 | 9.698980e-49 | -8.615850e-47 |
| Msa0469060 | Msa1288070 | 0.812782 | 3.565649e-51 | -8.615850e-47 |
| Msa0469060 | Msa1290090 | -0.825002 | 5.942282e-54 | -8.615850e-47 |
| Msa0469060 | Msa1294280 | 0.803182 | 3.938160e-49 | -8.615850e-47 |
| Msa0469060 | Msa1295210 | -0.806374 | 8.483385e-50 | -8.615850e-47 |
| Msa0469060 | Msa1297070 | 0.832697 | 8.155199e-56 | -8.615850e-47 |
| Msa0469060 | Msa1297220 | -0.807813 | 4.208589e-50 | -8.615850e-47 |
| Msa0469060 | Msa1312210 | 0.801067 | 1.072551e-48 | -8.615850e-47 |
| Msa0469060 | Msa1323260 | -0.815158 | 1.066959e-51 | -8.615850e-47 |
| Msa0469060 | Msa1328280 | 0.848146 | 7.380095e-60 | -8.615850e-47 |
| Msa0469060 | Msa1328870 | 0.834232 | 3.376409e-56 | -8.615850e-47 |
| Msa0469060 | Msa1334670 | 0.859100 | 5.225030e-63 | -8.615850e-47 |
| Msa0469060 | Msa1342760 | 0.827435 | 1.567340e-54 | -8.615850e-47 |
| Msa0469060 | Msa1343450 | -0.806877 | 6.643713e-50 | -8.615850e-47 |
| Msa0469060 | Msa1347610 | 0.805926 | 1.054552e-49 | -8.615850e-47 |
| Msa0469060 | Msa1352630 | -0.808735 | 2.675958e-50 | -8.615850e-47 |
| Msa0469060 | Msa1361680 | 0.805238 | 1.470300e-49 | -8.615850e-47 |
| Msa0469060 | Msa1362590 | 0.844736 | 6.284964e-59 | -8.615850e-47 |
| Msa0469060 | Msa1365130 | -0.826398 | 2.772325e-54 | -8.615850e-47 |
| Msa0469060 | Msa1365230 | 0.861168 | 1.240313e-63 | -8.615850e-47 |
| Msa0469060 | Msa1366140 | -0.831153 | 1.962110e-55 | -8.615850e-47 |
| Msa0469060 | Msa1367900 | -0.832049 | 1.179744e-55 | -8.615850e-47 |
| Msa0469060 | Msa1371800 | 0.839069 | 1.974792e-57 | -8.615850e-47 |
| Msa0469060 | Msa1372030 | 0.852973 | 3.246542e-61 | -8.615850e-47 |
| Msa0469060 | Msa1376310 | 0.829782 | 4.244970e-55 | -8.615850e-47 |
| Msa0469060 | Msa1377460 | 0.807704 | 4.438870e-50 | -8.615850e-47 |
| Msa0469060 | Msa1379270 | -0.803628 | 3.184114e-49 | -8.615850e-47 |
| Msa0469060 | Msa1379940 | 0.808041 | 3.763606e-50 | -8.615850e-47 |
| Msa0469060 | Msa1381330 | 0.808562 | 2.914170e-50 | -8.615850e-47 |
| Msa0469060 | Msa1381800 | 0.810849 | 9.392993e-51 | -8.615850e-47 |
| Msa0469060 | Msa1382830 | 0.805424 | 1.344213e-49 | -8.615850e-47 |
| Msa0469060 | Msa1385570 | 0.819117 | 1.374381e-52 | -8.615850e-47 |
| Msa0469060 | Msa1387100 | -0.825892 | 3.658476e-54 | -8.615850e-47 |
| Msa0469060 | Msa1387450 | -0.820306 | 7.355383e-53 | -8.615850e-47 |
| Msa0469060 | Msa1389820 | 0.821879 | 3.192555e-53 | -8.615850e-47 |
| Msa0469060 | Msa1402010 | 0.803096 | 4.103810e-49 | -8.615850e-47 |
| Msa0469060 | Msa1405830 | 0.816280 | 5.997660e-52 | -8.615850e-47 |
| Msa0469060 | Msa1407810 | 0.807539 | 4.811501e-50 | -8.615850e-47 |
| Msa0469060 | Msa1413020 | 0.843985 | 1.000488e-58 | -8.615850e-47 |
| Msa0469060 | Msa1427600 | -0.814010 | 1.915484e-51 | -8.615850e-47 |
| Msa0469060 | Msa1431520 | 0.813003 | 3.188230e-51 | -8.615850e-47 |
| Msa0469060 | Msa1434700 | 0.802264 | 6.091414e-49 | -8.615850e-47 |
| Msa0469060 | Msa1437780 | 0.807543 | 4.802569e-50 | -8.615850e-47 |
| Msa0469060 | Msa1438510 | 0.823540 | 1.311195e-53 | -8.615850e-47 |
| Msa0469060 | Msa1439920 | 0.827738 | 1.325740e-54 | -8.615850e-47 |
| Msa0469060 | Msa1447900 | 0.811964 | 5.378731e-51 | -8.615850e-47 |
| Msa0469060 | Msa1462610 | 0.808468 | 3.051411e-50 | -8.615850e-47 |
| Msa0238960 | Msa0469060 | -0.821522 | 3.860554e-53 | -8.615850e-47 |
| Msa0240590 | Msa0469060 | -0.825762 | 3.928362e-54 | -8.615850e-47 |
| Msa0244820 | Msa0469060 | -0.809289 | 2.037032e-50 | -8.615850e-47 |
| Msa0249870 | Msa0469060 | 0.801051 | 1.080601e-48 | -8.615850e-47 |
| Msa0260570 | Msa0469060 | 0.835092 | 2.051731e-56 | -8.615850e-47 |
| Msa0260630 | Msa0469060 | 0.831719 | 1.423272e-55 | -8.615850e-47 |
| Msa0260980 | Msa0469060 | 0.844706 | 6.403049e-59 | -8.615850e-47 |
| Msa0267450 | Msa0469060 | -0.832003 | 1.211207e-55 | -8.615850e-47 |
| Msa0267510 | Msa0469060 | -0.828633 | 8.065511e-55 | -8.615850e-47 |
| Msa0269220 | Msa0469060 | -0.807478 | 4.956656e-50 | -8.615850e-47 |
| Msa0276800 | Msa0469060 | -0.854337 | 1.316855e-61 | -8.615850e-47 |
| Msa0279810 | Msa0469060 | 0.804117 | 2.519452e-49 | -8.615850e-47 |
| Msa0281540 | Msa0469060 | 0.817746 | 2.810003e-52 | -8.615850e-47 |
| Msa0288400 | Msa0469060 | 0.840722 | 7.326613e-58 | -8.615850e-47 |
| Msa0300670 | Msa0469060 | -0.817513 | 3.172491e-52 | -8.615850e-47 |
| Msa0307430 | Msa0469060 | 0.835337 | 1.779390e-56 | -8.615850e-47 |
| Msa0307630 | Msa0469060 | 0.811004 | 8.696498e-51 | -8.615850e-47 |
| Msa0316000 | Msa0469060 | 0.831777 | 1.377201e-55 | -8.615850e-47 |
| Msa0316720 | Msa0469060 | -0.853138 | 2.913574e-61 | -8.615850e-47 |
| Msa0319220 | Msa0469060 | 0.800926 | 1.145830e-48 | -8.615850e-47 |
| Msa0320580 | Msa0469060 | 0.807625 | 4.613630e-50 | -8.615850e-47 |
| Msa0336430 | Msa0469060 | 0.842488 | 2.508482e-58 | -8.615850e-47 |
| Msa0336460 | Msa0469060 | 0.815131 | 1.081632e-51 | -8.615850e-47 |
| Msa0336520 | Msa0469060 | 0.855480 | 6.135084e-62 | -8.615850e-47 |
| Msa0337760 | Msa0469060 | -0.807497 | 4.910836e-50 | -8.615850e-47 |
| Msa0342220 | Msa0469060 | 0.844891 | 5.707550e-59 | -8.615850e-47 |
| Msa0344110 | Msa0469060 | 0.815143 | 1.075093e-51 | -8.615850e-47 |
| Msa0349930 | Msa0469060 | 0.826426 | 2.731136e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469060 | MtrunA17_Chr3g0123391 | 95.817 | 526 | 20 | 2 | 1 | 526 | 1 | 524 | 0.0 | 1014 |
| Msa0469060 | MtrunA17_Chr3g0096561 | 46.591 | 176 | 78 | 5 | 288 | 459 | 645 | 808 | 2.82e-36 | 144 |
| Msa0469060 | MtrunA17_Chr3g0096561 | 34.112 | 214 | 110 | 6 | 20 | 232 | 179 | 362 | 3.99e-24 | 107 |
| Msa0469060 | MtrunA17_Chr8g0385721 | 46.575 | 146 | 66 | 1 | 333 | 478 | 799 | 932 | 1.86e-35 | 141 |
| Msa0469060 | MtrunA17_Chr2g0304041 | 40.278 | 216 | 104 | 7 | 288 | 493 | 648 | 848 | 1.90e-35 | 141 |
| Msa0469060 | MtrunA17_Chr2g0304041 | 36.000 | 175 | 88 | 4 | 59 | 232 | 209 | 360 | 6.45e-24 | 106 |
| Msa0469060 | MtrunA17_Chr7g0221461 | 43.243 | 185 | 80 | 5 | 294 | 475 | 626 | 788 | 3.91e-35 | 140 |
| Msa0469060 | MtrunA17_Chr3g0131631 | 46.575 | 146 | 66 | 1 | 333 | 478 | 791 | 924 | 5.98e-35 | 140 |
| Msa0469060 | MtrunA17_Chr4g0035711 | 46.043 | 139 | 72 | 2 | 330 | 465 | 181 | 319 | 1.16e-29 | 119 |
| Msa0469060 | MtrunA17_Chr5g0424411 | 43.269 | 104 | 52 | 2 | 336 | 433 | 73 | 175 | 1.53e-20 | 89.7 |
| Msa0469060 | MtrunA17_Chr5g0428671 | 56.338 | 71 | 30 | 1 | 149 | 219 | 43 | 112 | 1.54e-19 | 84.3 |
| Msa0469060 | MtrunA17_Chr5g0423961 | 53.521 | 71 | 32 | 1 | 149 | 219 | 43 | 112 | 2.75e-18 | 80.9 |
| Msa0469060 | MtrunA17_Chr7g0276291 | 43.956 | 91 | 49 | 1 | 379 | 467 | 5 | 95 | 3.99e-18 | 81.6 |
| Msa0469060 | MtrunA17_Chr7g0276301 | 26.087 | 184 | 109 | 6 | 45 | 225 | 104 | 263 | 4.61e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469060 | AT3G26120.1 | 45.726 | 503 | 216 | 14 | 42 | 505 | 101 | 585 | 4.29e-129 | 390 |
| Msa0469060 | AT1G67770.1 | 41.501 | 453 | 200 | 12 | 42 | 475 | 75 | 481 | 3.23e-102 | 317 |
| Msa0469060 | AT5G61960.7 | 50.000 | 148 | 58 | 3 | 333 | 478 | 734 | 867 | 8.18e-38 | 149 |
| Msa0469060 | AT5G61960.4 | 50.000 | 148 | 58 | 3 | 333 | 478 | 734 | 867 | 8.18e-38 | 149 |
| Msa0469060 | AT5G61960.8 | 50.000 | 148 | 58 | 3 | 333 | 478 | 734 | 867 | 8.18e-38 | 149 |
| Msa0469060 | AT5G61960.11 | 50.000 | 148 | 58 | 3 | 333 | 478 | 734 | 867 | 8.18e-38 | 149 |
| Msa0469060 | AT5G61960.6 | 50.000 | 148 | 58 | 3 | 333 | 478 | 734 | 867 | 8.18e-38 | 149 |
| Msa0469060 | AT5G61960.9 | 50.000 | 148 | 58 | 3 | 333 | 478 | 734 | 867 | 8.18e-38 | 149 |
| Msa0469060 | AT5G61960.5 | 50.000 | 148 | 58 | 3 | 333 | 478 | 734 | 867 | 8.18e-38 | 149 |
| Msa0469060 | AT5G61960.3 | 50.000 | 148 | 58 | 3 | 333 | 478 | 741 | 874 | 8.88e-38 | 149 |
| Msa0469060 | AT5G61960.1 | 50.000 | 148 | 58 | 3 | 333 | 478 | 741 | 874 | 8.88e-38 | 149 |
| Msa0469060 | AT5G61960.10 | 50.000 | 148 | 58 | 3 | 333 | 478 | 741 | 874 | 8.88e-38 | 149 |
| Msa0469060 | AT5G61960.2 | 50.000 | 148 | 58 | 3 | 333 | 478 | 741 | 874 | 8.88e-38 | 149 |
| Msa0469060 | AT5G07290.1 | 42.932 | 191 | 84 | 5 | 290 | 478 | 705 | 872 | 1.22e-36 | 145 |
| Msa0469060 | AT5G07290.1 | 32.026 | 153 | 81 | 4 | 69 | 221 | 234 | 363 | 2.18e-15 | 80.1 |
| Msa0469060 | AT1G37140.1 | 49.242 | 132 | 59 | 2 | 335 | 465 | 83 | 207 | 1.58e-34 | 130 |
| Msa0469060 | AT1G29400.1 | 47.482 | 139 | 61 | 1 | 326 | 464 | 643 | 769 | 1.38e-33 | 136 |
| Msa0469060 | AT1G29400.1 | 33.028 | 218 | 109 | 7 | 10 | 226 | 145 | 326 | 7.86e-21 | 97.1 |
| Msa0469060 | AT1G29400.2 | 47.482 | 139 | 61 | 1 | 326 | 464 | 643 | 769 | 1.38e-33 | 136 |
| Msa0469060 | AT1G29400.2 | 33.028 | 218 | 109 | 7 | 10 | 226 | 145 | 326 | 7.86e-21 | 97.1 |
| Msa0469060 | AT1G29400.3 | 47.482 | 139 | 61 | 1 | 326 | 464 | 643 | 769 | 1.38e-33 | 136 |
| Msa0469060 | AT1G29400.3 | 33.028 | 218 | 109 | 7 | 10 | 226 | 145 | 326 | 7.86e-21 | 97.1 |
| Msa0469060 | AT5G07930.1 | 35.912 | 181 | 108 | 4 | 297 | 476 | 100 | 273 | 2.12e-28 | 114 |
| Msa0469060 | AT5G07930.3 | 35.912 | 181 | 108 | 4 | 297 | 476 | 100 | 273 | 2.59e-28 | 114 |
| Msa0469060 | AT5G07930.2 | 36.691 | 139 | 83 | 2 | 297 | 434 | 100 | 234 | 6.98e-24 | 101 |
| Msa0469060 | AT2G42890.1 | 34.426 | 183 | 97 | 5 | 45 | 226 | 196 | 356 | 1.65e-23 | 105 |
| Msa0469060 | AT2G42890.1 | 41.727 | 139 | 68 | 3 | 321 | 458 | 664 | 790 | 1.77e-23 | 105 |
| Msa0469060 | AT2G42890.3 | 34.426 | 183 | 97 | 5 | 45 | 226 | 183 | 343 | 1.72e-23 | 105 |
| Msa0469060 | AT2G42890.3 | 41.727 | 139 | 68 | 3 | 321 | 458 | 651 | 777 | 1.84e-23 | 105 |
| Msa0469060 | AT2G42890.2 | 34.426 | 183 | 97 | 5 | 45 | 226 | 183 | 343 | 1.72e-23 | 105 |
| Msa0469060 | AT2G42890.2 | 41.727 | 139 | 68 | 3 | 321 | 458 | 651 | 777 | 1.84e-23 | 105 |
| Msa0469060 | AT1G37140.2 | 45.349 | 86 | 46 | 1 | 381 | 465 | 91 | 176 | 1.85e-17 | 81.3 |
Find 169 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGGAGCAGTAGGGTTTA+AGG | 0.136392 | 3_3:-70745160 | None:intergenic |
| GGATTAGAATGAAATGATTT+TGG | 0.200138 | 3_3:-70746040 | None:intergenic |
| GTAGCGGCGTGGGGAAAATT+TGG | 0.206226 | 3_3:-70745506 | None:intergenic |
| AATGATTATAGGAGCAATTA+AGG | 0.224880 | 3_3:+70745880 | Msa0469060:intron |
| TCTTTACGTAGGTCAGTTTC+AGG | 0.224982 | 3_3:-70745321 | None:intergenic |
| TTACTAAACTCAATAGTAAT+TGG | 0.237341 | 3_3:-70746016 | None:intergenic |
| GGATTAAGGTTGAAATTAAA+TGG | 0.265370 | 3_3:-70746085 | None:intergenic |
| CGTAAAGACCTTTCGGCTTT+CGG | 0.268540 | 3_3:+70745336 | Msa0469060:CDS |
| AACAAATGCAACGTGGGATA+TGG | 0.304008 | 3_3:+70746911 | Msa0469060:CDS |
| GTCAGTTTCAGGGGTGGGAG+GGG | 0.315198 | 3_3:-70745310 | None:intergenic |
| GTTTCAGGGGTGGGAGGGGC+AGG | 0.322616 | 3_3:-70745306 | None:intergenic |
| GTTCAAAGTAGAGAGAGTTT+TGG | 0.328298 | 3_3:+70746253 | Msa0469060:CDS |
| TTGAATGGCAAAGAGATTAA+TGG | 0.333735 | 3_3:+70745989 | Msa0469060:CDS |
| GCGGGGAAGGAGGTGGATTA+AGG | 0.334836 | 3_3:-70746099 | None:intergenic |
| CCACAATAGGATTGGTTCAA+TGG | 0.341291 | 3_3:+70746192 | Msa0469060:CDS |
| GGTATGGGAATGTAGTTGTT+TGG | 0.353379 | 3_3:-70745189 | None:intergenic |
| CGGCGGCGGCGTGACGGCAT+AGG | 0.357948 | 3_3:-70745244 | None:intergenic |
| ATAAGAGTTTGACATTTAAC+CGG | 0.373048 | 3_3:+70746164 | Msa0469060:CDS |
| TGGAAGAAGGTCAAGATCAT+AGG | 0.376422 | 3_3:+70747366 | Msa0469060:CDS |
| AGGTCAGTTTCAGGGGTGGG+AGG | 0.380294 | 3_3:-70745312 | None:intergenic |
| TTGATCATGAGAGTCGTTCT+AGG | 0.381305 | 3_3:-70746364 | None:intergenic |
| GGCTGCGGAGGTAGCGGCGT+GGG | 0.384795 | 3_3:-70745516 | None:intergenic |
| ATTACTTACTTAAAATCTAT+AGG | 0.386154 | 3_3:-70746600 | None:intergenic |
| TTAACCGGGTAAACCACAAT+AGG | 0.393493 | 3_3:+70746179 | Msa0469060:CDS |
| CCGCTACCTCCGCAGCCGCC+AGG | 0.400631 | 3_3:+70745522 | Msa0469060:CDS |
| ATGTTCCCCGCCACTGGAAT+TGG | 0.407737 | 3_3:-70747305 | None:intergenic |
| TAGCGGCGTGGGGAAAATTT+GGG | 0.411228 | 3_3:-70745505 | None:intergenic |
| GTATGGGAATGTAGTTGTTT+GGG | 0.413782 | 3_3:-70745188 | None:intergenic |
| GCGGGGAACATGCTACAAAT+TGG | 0.413975 | 3_3:+70747317 | Msa0469060:CDS |
| GAGAATAGAGCGGGTGGGTA+TGG | 0.419463 | 3_3:-70745277 | None:intergenic |
| TGACCTACGTAAAGACCTTT+CGG | 0.422014 | 3_3:+70745329 | Msa0469060:CDS |
| GGGTTAAACTCTGGAGCAGT+AGG | 0.431326 | 3_3:-70745168 | None:intergenic |
| GGGTGGGAGGGGCAGGACTA+AGG | 0.436139 | 3_3:-70745299 | None:intergenic |
| CGCCGTCGCGGGGAAGGAGG+TGG | 0.436349 | 3_3:-70746106 | None:intergenic |
| CACAATAGGATTGGTTCAAT+GGG | 0.438115 | 3_3:+70746193 | Msa0469060:CDS |
| GGCATAGGGTGGGTAGGGGT+AGG | 0.442789 | 3_3:-70745229 | None:intergenic |
| GGCCTTCCAGCACCAACATT+GGG | 0.443227 | 3_3:+70746979 | Msa0469060:CDS |
| CGACATAAGAGATGCTGAAA+AGG | 0.443358 | 3_3:+70745955 | Msa0469060:CDS |
| AAAGACGGACCTGTATTTGT+TGG | 0.443856 | 3_3:-70746395 | None:intergenic |
| CTTTACGTAGGTCAGTTTCA+GGG | 0.451037 | 3_3:-70745320 | None:intergenic |
| AAGACGGACCTGTATTTGTT+GGG | 0.452268 | 3_3:-70746394 | None:intergenic |
| TGGTTCAATGGGTTCATTGA+AGG | 0.454062 | 3_3:+70746204 | Msa0469060:CDS |
| ACTCACATACGCAAGAGTTC+AGG | 0.454877 | 3_3:+70747030 | Msa0469060:CDS |
| AAAACATACCCAACAAATAC+AGG | 0.458427 | 3_3:+70746386 | Msa0469060:CDS |
| TGTAGCATGTTCCCCGCCAC+TGG | 0.459934 | 3_3:-70747311 | None:intergenic |
| CGTAGGTCAGTTTCAGGGGT+GGG | 0.460430 | 3_3:-70745315 | None:intergenic |
| GAAGTTACTGTTGAATATGC+TGG | 0.460681 | 3_3:+70746503 | Msa0469060:CDS |
| GTGGAGAAAATCGCCGTCGC+GGG | 0.461953 | 3_3:-70746117 | None:intergenic |
| GTGACGGCATAGGGTGGGTA+GGG | 0.463074 | 3_3:-70745234 | None:intergenic |
| GGTCAGTTTCAGGGGTGGGA+GGG | 0.466540 | 3_3:-70745311 | None:intergenic |
| CGTCTAAATTGAAAACAACT+AGG | 0.466558 | 3_3:-70745608 | None:intergenic |
| ATACCGACGGCGACTGGTAT+GGG | 0.467858 | 3_3:-70745204 | None:intergenic |
| CTTATTAGAGATGTAAGCAT+TGG | 0.469382 | 3_3:-70746062 | None:intergenic |
| CGTGACGGCATAGGGTGGGT+AGG | 0.474152 | 3_3:-70745235 | None:intergenic |
| TGACGGCATAGGGTGGGTAG+GGG | 0.476410 | 3_3:-70745233 | None:intergenic |
| GGGATACACCATGGAAGAAA+AGG | 0.479864 | 3_3:+70745909 | Msa0469060:CDS |
| ACACGCAGAGACGGCGTTTG+CGG | 0.480194 | 3_3:+70745428 | Msa0469060:CDS |
| AATAGAGCGGGTGGGTATGG+TGG | 0.480624 | 3_3:-70745274 | None:intergenic |
| TTATTAGAGATGTAAGCATT+GGG | 0.483182 | 3_3:-70746061 | None:intergenic |
| TTGGGGAAAGTGCTTGGAGT+TGG | 0.483683 | 3_3:+70746272 | Msa0469060:CDS |
| AGGAAGGTACACAAAGTCAT+AGG | 0.485708 | 3_3:-70746580 | None:intergenic |
| GGCGGCGGCGTGACGGCATA+GGG | 0.486024 | 3_3:-70745243 | None:intergenic |
| GCGACGAGACCTGGCGGCTG+CGG | 0.486187 | 3_3:-70745531 | None:intergenic |
| CCTGGCGGCTGCGGAGGTAG+CGG | 0.489495 | 3_3:-70745522 | None:intergenic |
| CTACTTTGAACTCTAACAAA+AGG | 0.492457 | 3_3:-70746241 | None:intergenic |
| GGCACACCGGCGACGAGACC+TGG | 0.493166 | 3_3:-70745540 | None:intergenic |
| AATACCGACGGCGACTGGTA+TGG | 0.494952 | 3_3:-70745205 | None:intergenic |
| TAGTTGTTTGGGTTAAACTC+TGG | 0.495392 | 3_3:-70745177 | None:intergenic |
| AAAGTGCTTGGAGTTGGAAG+GGG | 0.498609 | 3_3:+70746278 | Msa0469060:CDS |
| AGACCTCCCAATGTTGGTGC+TGG | 0.498744 | 3_3:-70746985 | None:intergenic |
| CTCAAAGTTCCCGTGTGAGA+TGG | 0.501576 | 3_3:+70747226 | Msa0469060:CDS |
| CAATCCTATTGTGGTTTACC+CGG | 0.502060 | 3_3:-70746183 | None:intergenic |
| TAGGGAATACCGACGGCGAC+TGG | 0.502108 | 3_3:-70745210 | None:intergenic |
| ACGGAGCCAATTCCAGTGGC+GGG | 0.502691 | 3_3:+70747299 | Msa0469060:CDS |
| GGAAAGTGCTTGGAGTTGGA+AGG | 0.508496 | 3_3:+70746276 | Msa0469060:CDS |
| GGAAGAAGGTCAAGATCATA+GGG | 0.510176 | 3_3:+70747367 | Msa0469060:CDS |
| AAGGCTTTGAAAGAATTGAA+TGG | 0.513360 | 3_3:+70745974 | Msa0469060:CDS |
| GCTGCGGAGGTAGCGGCGTG+GGG | 0.515082 | 3_3:-70745515 | None:intergenic |
| GAAAATCGCCGTCGCGGGGA+AGG | 0.520245 | 3_3:-70746112 | None:intergenic |
| GCATAGGGTGGGTAGGGGTA+GGG | 0.522118 | 3_3:-70745228 | None:intergenic |
| GGCGGCGTGACGGCATAGGG+TGG | 0.523616 | 3_3:-70745240 | None:intergenic |
| GGTTCAATGGGTTCATTGAA+GGG | 0.524979 | 3_3:+70746205 | Msa0469060:CDS |
| CGTCGCCGGTGTGCCACTGT+GGG | 0.525073 | 3_3:+70745548 | Msa0469060:CDS |
| ACGGAATGAGTCCGTTTGAA+CGG | 0.525732 | 3_3:-70745370 | None:intergenic |
| TAGAATCTTAGCGTTGCCTC+AGG | 0.525923 | 3_3:-70746953 | None:intergenic |
| ACGAGACCTGGCGGCTGCGG+AGG | 0.526752 | 3_3:-70745528 | None:intergenic |
| CCATTGAACCAATCCTATTG+TGG | 0.528406 | 3_3:-70746192 | None:intergenic |
| AGGCCTTCCAGCACCAACAT+TGG | 0.531003 | 3_3:+70746978 | Msa0469060:CDS |
| TAGGAGCAATTAAGGAAGTG+AGG | 0.533444 | 3_3:+70745888 | Msa0469060:intron |
| CGAAGTCAGAGCCGTTCAAA+CGG | 0.533758 | 3_3:+70745359 | Msa0469060:CDS |
| CGGGTAAACCACAATAGGAT+TGG | 0.535306 | 3_3:+70746184 | Msa0469060:CDS |
| CTCCCAATGTTGGTGCTGGA+AGG | 0.535713 | 3_3:-70746981 | None:intergenic |
| CAGCCGCCAGGTCTCGTCGC+CGG | 0.539793 | 3_3:+70745534 | Msa0469060:CDS |
| TGCAATGAGCAGCTAGGCGA+CGG | 0.544239 | 3_3:+70746543 | Msa0469060:CDS |
| GAAAGTGCTTGGAGTTGGAA+GGG | 0.544715 | 3_3:+70746277 | Msa0469060:CDS |
| GCGGCGTGACGGCATAGGGT+GGG | 0.552470 | 3_3:-70745239 | None:intergenic |
| AGGAGCAATTAAGGAAGTGA+GGG | 0.556032 | 3_3:+70745889 | Msa0469060:intron |
| TAGATGCGGCGGCGGCGTGA+CGG | 0.556131 | 3_3:-70745250 | None:intergenic |
| TAAGAGTTTGACATTTAACC+GGG | 0.558889 | 3_3:+70746165 | Msa0469060:CDS |
| ATGGTGGATAGATGCGGCGG+CGG | 0.559637 | 3_3:-70745258 | None:intergenic |
| ACGTAGGTCAGTTTCAGGGG+TGG | 0.561271 | 3_3:-70745316 | None:intergenic |
| AAAATTTGGGAATAAGAAAG+AGG | 0.561489 | 3_3:-70745492 | None:intergenic |
| AATCGCCGTCGCGGGGAAGG+AGG | 0.565397 | 3_3:-70746109 | None:intergenic |
| ACAAAGTCATAGGAGGATAG+AGG | 0.568773 | 3_3:-70746570 | None:intergenic |
| GTCTAAATTGAAAACAACTA+GGG | 0.568866 | 3_3:-70745607 | None:intergenic |
| GTAGCTGATGAGATGGAAGA+AGG | 0.569726 | 3_3:+70747353 | Msa0469060:CDS |
| GTCAATTGTTTCCCATCTCG+AGG | 0.569995 | 3_3:-70747278 | None:intergenic |
| TTTACGTAGGTCAGTTTCAG+GGG | 0.571001 | 3_3:-70745319 | None:intergenic |
| GAAGGTCAAGATCATAGGGT+AGG | 0.572001 | 3_3:+70747371 | Msa0469060:CDS |
| AATTGTGGTGAATGAGGGCG+TGG | 0.572208 | 3_3:-70746136 | None:intergenic |
| CAGTATCAGACAGTACATAG+TGG | 0.572229 | 3_3:-70745572 | None:intergenic |
| CGGCTGCGGAGGTAGCGGCG+TGG | 0.572442 | 3_3:-70745517 | None:intergenic |
| GAGCAGTTATGACTCCGTTA+CGG | 0.572447 | 3_3:-70745389 | None:intergenic |
| AACTTGTCGCAGCTGATCAG+AGG | 0.574469 | 3_3:-70745640 | None:intergenic |
| TCGTCGCCGGTGTGCCACTG+TGG | 0.575195 | 3_3:+70745547 | Msa0469060:CDS |
| GGTTAAACTCTGGAGCAGTA+GGG | 0.575682 | 3_3:-70745167 | None:intergenic |
| CAAGATCATAGGGTAGGTAG+TGG | 0.577368 | 3_3:+70747377 | Msa0469060:CDS |
| TGAGATAATTGTGGTGAATG+AGG | 0.579205 | 3_3:-70746142 | None:intergenic |
| AGTTAAAGACCTCCCAATGT+TGG | 0.586318 | 3_3:-70746991 | None:intergenic |
| CTTACTTAAAATCTATAGGA+AGG | 0.588507 | 3_3:-70746596 | None:intergenic |
| CTGTCTGATACTGTGAATCA+AGG | 0.591917 | 3_3:+70745582 | Msa0469060:CDS |
| GACGGAGCCAATTCCAGTGG+CGG | 0.594560 | 3_3:+70747298 | Msa0469060:CDS |
| GAGATAATTGTGGTGAATGA+GGG | 0.596266 | 3_3:-70746141 | None:intergenic |
| AATACGCAGCACAGAGGACG+TGG | 0.596568 | 3_3:-70745464 | None:intergenic |
| GATCATAGGGTAGGTAGTGG+TGG | 0.598738 | 3_3:+70747380 | Msa0469060:CDS |
| TCCATCTCATCAGCTACAGA+AGG | 0.601752 | 3_3:-70747347 | None:intergenic |
| TGATCTTAGACACGCAGAGA+CGG | 0.602254 | 3_3:+70745419 | Msa0469060:CDS |
| AGGACTAAGGAGAATAGAGC+GGG | 0.604231 | 3_3:-70745286 | None:intergenic |
| ATCCACCTCCTTCCCCGCGA+CGG | 0.605475 | 3_3:+70746104 | Msa0469060:CDS |
| TGGAGAAAATCGCCGTCGCG+GGG | 0.607343 | 3_3:-70746116 | None:intergenic |
| AAATTTGGGAATAAGAAAGA+GGG | 0.608481 | 3_3:-70745491 | None:intergenic |
| AGATAATGCTCCATCTCACA+CGG | 0.611046 | 3_3:-70747236 | None:intergenic |
| GTGGGTATGGTGGATAGATG+CGG | 0.612880 | 3_3:-70745264 | None:intergenic |
| TCGAGATGGGAAACAATTGA+CGG | 0.613818 | 3_3:+70747280 | Msa0469060:CDS |
| TGACTTCGCCGAAAGCCGAA+AGG | 0.617073 | 3_3:-70745344 | None:intergenic |
| TCCTTCTGTAGCTGATGAGA+TGG | 0.622229 | 3_3:+70747346 | Msa0469060:CDS |
| CGTGGAGAAAATCGCCGTCG+CGG | 0.622679 | 3_3:-70746118 | None:intergenic |
| GTACACTGCAATGAGCAGCT+AGG | 0.623158 | 3_3:+70746537 | Msa0469060:CDS |
| ACTAAGGAGAATAGAGCGGG+TGG | 0.623589 | 3_3:-70745283 | None:intergenic |
| CGAGGTGGTGAAAACACCAC+TGG | 0.627538 | 3_3:-70747260 | None:intergenic |
| GTTCATTGAAGGGTGAAGAG+AGG | 0.627589 | 3_3:+70746215 | Msa0469060:CDS |
| GAACTCTTGCGTATGTGAGT+TGG | 0.629637 | 3_3:-70747027 | None:intergenic |
| AAGGTACACAAAGTCATAGG+AGG | 0.633001 | 3_3:-70746577 | None:intergenic |
| CGGAGCCAATTCCAGTGGCG+GGG | 0.637866 | 3_3:+70747300 | Msa0469060:CDS |
| GTGGGCCCACAGTGGCACAC+CGG | 0.640125 | 3_3:-70745553 | None:intergenic |
| TATAGGAACAAATGCAACGT+GGG | 0.641721 | 3_3:+70746905 | Msa0469060:intron |
| AGTATCAGACAGTACATAGT+GGG | 0.648519 | 3_3:-70745571 | None:intergenic |
| GGCAACGCTAAGATTCTACA+AGG | 0.648560 | 3_3:+70746958 | Msa0469060:CDS |
| AGGAAGTGAGGGATACACCA+TGG | 0.653479 | 3_3:+70745900 | Msa0469060:CDS |
| AATTGTTTCCCATCTCGAGG+TGG | 0.655393 | 3_3:-70747275 | None:intergenic |
| CTTCCAGCACCAACATTGGG+AGG | 0.657486 | 3_3:+70746982 | Msa0469060:CDS |
| CTAAGGAGAATAGAGCGGGT+GGG | 0.672614 | 3_3:-70745282 | None:intergenic |
| TGTGAATATGACATCTCCTG+AGG | 0.673075 | 3_3:+70746937 | Msa0469060:CDS |
| ATTCCCATACCAGTCGCCGT+CGG | 0.681084 | 3_3:+70745201 | Msa0469060:CDS |
| AAACTCTTATGAGATAATTG+TGG | 0.683374 | 3_3:-70746151 | None:intergenic |
| CAAACGGACTCATTCCGTAA+CGG | 0.689626 | 3_3:+70745375 | Msa0469060:CDS |
| TCTAGGATCAGATTCAACAA+TGG | 0.693384 | 3_3:-70746347 | None:intergenic |
| AAGCCGAAAGGTCTTTACGT+AGG | 0.700365 | 3_3:-70745332 | None:intergenic |
| CAGGACTAAGGAGAATAGAG+CGG | 0.701567 | 3_3:-70745287 | None:intergenic |
| GATAATGCTCCATCTCACAC+GGG | 0.708028 | 3_3:-70747235 | None:intergenic |
| ATTGACGGAGCCAATTCCAG+TGG | 0.712659 | 3_3:+70747295 | Msa0469060:CDS |
| GATGGAGCATTATCTGCCAG+TGG | 0.712737 | 3_3:+70747244 | Msa0469060:CDS |
| ACACCGGCGACGAGACCTGG+CGG | 0.714164 | 3_3:-70745537 | None:intergenic |
| GGTATGGTGGATAGATGCGG+CGG | 0.718859 | 3_3:-70745261 | None:intergenic |
| ATATAGGAACAAATGCAACG+TGG | 0.745597 | 3_3:+70746904 | Msa0469060:intron |
| AGTACATAGTGGGCCCACAG+TGG | 0.755442 | 3_3:-70745561 | None:intergenic |
| GGTTGAAATACGCAGCACAG+AGG | 0.761263 | 3_3:-70745470 | None:intergenic |
| GTAGGGGTAGGGAATACCGA+CGG | 0.774683 | 3_3:-70745217 | None:intergenic |
| GCTCATTGCAGTGTACACAG+TGG | 0.859735 | 3_3:-70746530 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTGTTTTTAATGATTAT+AGG | + | chr3_3:70745869-70745888 | Msa0469060:intron | 10.0% |
| !!! | TTATTTTATTATGTGAAATT+TGG | + | chr3_3:70746464-70746483 | Msa0469060:intron | 10.0% |
| !! | TACATAATAATAAAATAATG+TGG | - | chr3_3:70746834-70746853 | None:intergenic | 10.0% |
| !!! | TGTATTTTTATTTATGAAAA+GGG | + | chr3_3:70747173-70747192 | Msa0469060:intron | 10.0% |
| !! | ATTACTTACTTAAAATCTAT+AGG | - | chr3_3:70746603-70746622 | None:intergenic | 15.0% |
| !!! | GTGTATTTTTATTTATGAAA+AGG | + | chr3_3:70747172-70747191 | Msa0469060:intron | 15.0% |
| !! | AAAGAATGAAAAAGCTTAAT+AGG | + | chr3_3:70745780-70745799 | Msa0469060:intron | 20.0% |
| !! | TTACTAAACTCAATAGTAAT+TGG | - | chr3_3:70746019-70746038 | None:intergenic | 20.0% |
| !! | ATCTACCAAAAAACAATAAT+GGG | - | chr3_3:70746642-70746661 | None:intergenic | 20.0% |
| !! | TATCTACCAAAAAACAATAA+TGG | - | chr3_3:70746643-70746662 | None:intergenic | 20.0% |
| !! | TTTAAGTAAAAAACCATGAT+CGG | - | chr3_3:70746717-70746736 | None:intergenic | 20.0% |
| !!! | TTATTTGAGTTAGAACTTTT+GGG | + | chr3_3:70746753-70746772 | Msa0469060:intron | 20.0% |
| !! | ACCACTACATTATATATATT+TGG | + | chr3_3:70747059-70747078 | Msa0469060:intron | 20.0% |
| !! | ACCAAATATATATAATGTAG+TGG | - | chr3_3:70747063-70747082 | None:intergenic | 20.0% |
| !!! | TTTTATTTATGAAAAGGGTT+TGG | + | chr3_3:70747178-70747197 | Msa0469060:intron | 20.0% |
| ! | AAATTTGGGAATAAGAAAGA+GGG | - | chr3_3:70745494-70745513 | None:intergenic | 25.0% |
| ! | AAAATTTGGGAATAAGAAAG+AGG | - | chr3_3:70745495-70745514 | None:intergenic | 25.0% |
| ! | GTCTAAATTGAAAACAACTA+GGG | - | chr3_3:70745610-70745629 | None:intergenic | 25.0% |
| !!! | TCTCATTTCTGAAACATAAA+AGG | - | chr3_3:70745728-70745747 | None:intergenic | 25.0% |
| ! | AAACATGAATGAGTAAAAGT+GGG | - | chr3_3:70745840-70745859 | None:intergenic | 25.0% |
| ! | AAAACATGAATGAGTAAAAG+TGG | - | chr3_3:70745841-70745860 | None:intergenic | 25.0% |
| ! | AATGATTATAGGAGCAATTA+AGG | + | chr3_3:70745880-70745899 | Msa0469060:intron | 25.0% |
| !! | GGATTAGAATGAAATGATTT+TGG | - | chr3_3:70746043-70746062 | None:intergenic | 25.0% |
| ! | TTATTAGAGATGTAAGCATT+GGG | - | chr3_3:70746064-70746083 | None:intergenic | 25.0% |
| ! | GGATTAAGGTTGAAATTAAA+TGG | - | chr3_3:70746088-70746107 | None:intergenic | 25.0% |
| ! | AAACTCTTATGAGATAATTG+TGG | - | chr3_3:70746154-70746173 | None:intergenic | 25.0% |
| ! | ATAAGAGTTTGACATTTAAC+CGG | + | chr3_3:70746164-70746183 | Msa0469060:CDS | 25.0% |
| ! | TAATGCACATCAAAAAAAGA+CGG | - | chr3_3:70746413-70746432 | None:intergenic | 25.0% |
| ! | CTTACTTAAAATCTATAGGA+AGG | - | chr3_3:70746599-70746618 | None:intergenic | 25.0% |
| !! | AAAAACAATAATGGGACATA+AGG | - | chr3_3:70746634-70746653 | None:intergenic | 25.0% |
| !!! | TATGTCCCATTATTGTTTTT+TGG | + | chr3_3:70746634-70746653 | Msa0469060:intron | 25.0% |
| !!! | GTTATTTGAGTTAGAACTTT+TGG | + | chr3_3:70746752-70746771 | Msa0469060:intron | 25.0% |
| !!! | TATTTGAGTTAGAACTTTTG+GGG | + | chr3_3:70746754-70746773 | Msa0469060:intron | 25.0% |
| ! | ATGACAAATCTGTGATATAT+AGG | + | chr3_3:70746888-70746907 | Msa0469060:intron | 25.0% |
| CGTCTAAATTGAAAACAACT+AGG | - | chr3_3:70745611-70745630 | None:intergenic | 30.0% | |
| AACATGAATGAGTAAAAGTG+GGG | - | chr3_3:70745839-70745858 | None:intergenic | 30.0% | |
| !! | AAGGCTTTGAAAGAATTGAA+TGG | + | chr3_3:70745974-70745993 | Msa0469060:CDS | 30.0% |
| TTGAATGGCAAAGAGATTAA+TGG | + | chr3_3:70745989-70746008 | Msa0469060:CDS | 30.0% | |
| CTTATTAGAGATGTAAGCAT+TGG | - | chr3_3:70746065-70746084 | None:intergenic | 30.0% | |
| TAAGAGTTTGACATTTAACC+GGG | + | chr3_3:70746165-70746184 | Msa0469060:CDS | 30.0% | |
| CTACTTTGAACTCTAACAAA+AGG | - | chr3_3:70746244-70746263 | None:intergenic | 30.0% | |
| ! | TTCAAAGTAGAGAGAGTTTT+GGG | + | chr3_3:70746254-70746273 | Msa0469060:CDS | 30.0% |
| AAAACATACCCAACAAATAC+AGG | + | chr3_3:70746386-70746405 | Msa0469060:CDS | 30.0% | |
| ATACTAGTACCATCACTATA+CGG | - | chr3_3:70746864-70746883 | None:intergenic | 30.0% | |
| ! | TAGTTGTTTGGGTTAAACTC+TGG | - | chr3_3:70745180-70745199 | None:intergenic | 35.0% |
| GTATGGGAATGTAGTTGTTT+GGG | - | chr3_3:70745191-70745210 | None:intergenic | 35.0% | |
| AGTATCAGACAGTACATAGT+GGG | - | chr3_3:70745574-70745593 | None:intergenic | 35.0% | |
| !!! | CGACAAGTTTTTGAAGCTTT+TGG | + | chr3_3:70745654-70745673 | Msa0469060:CDS | 35.0% |
| ! | GAAAAGGAATCAGAGTTTTG+TGG | + | chr3_3:70745925-70745944 | Msa0469060:CDS | 35.0% |
| GAGATAATTGTGGTGAATGA+GGG | - | chr3_3:70746144-70746163 | None:intergenic | 35.0% | |
| TGAGATAATTGTGGTGAATG+AGG | - | chr3_3:70746145-70746164 | None:intergenic | 35.0% | |
| !! | CACAATAGGATTGGTTCAAT+GGG | + | chr3_3:70746193-70746212 | Msa0469060:CDS | 35.0% |
| ! | GTTCAAAGTAGAGAGAGTTT+TGG | + | chr3_3:70746253-70746272 | Msa0469060:CDS | 35.0% |
| ! | TCAAAGTAGAGAGAGTTTTG+GGG | + | chr3_3:70746255-70746274 | Msa0469060:CDS | 35.0% |
| ! | TCTAGGATCAGATTCAACAA+TGG | - | chr3_3:70746350-70746369 | None:intergenic | 35.0% |
| GAAGTTACTGTTGAATATGC+TGG | + | chr3_3:70746503-70746522 | Msa0469060:CDS | 35.0% | |
| ATATAGGAACAAATGCAACG+TGG | + | chr3_3:70746904-70746923 | Msa0469060:intron | 35.0% | |
| TATAGGAACAAATGCAACGT+GGG | + | chr3_3:70746905-70746924 | Msa0469060:intron | 35.0% | |
| GGTATGGGAATGTAGTTGTT+TGG | - | chr3_3:70745192-70745211 | None:intergenic | 40.0% | |
| TTTACGTAGGTCAGTTTCAG+GGG | - | chr3_3:70745322-70745341 | None:intergenic | 40.0% | |
| CTTTACGTAGGTCAGTTTCA+GGG | - | chr3_3:70745323-70745342 | None:intergenic | 40.0% | |
| TCTTTACGTAGGTCAGTTTC+AGG | - | chr3_3:70745324-70745343 | None:intergenic | 40.0% | |
| TGACCTACGTAAAGACCTTT+CGG | + | chr3_3:70745329-70745348 | Msa0469060:CDS | 40.0% | |
| CAGTATCAGACAGTACATAG+TGG | - | chr3_3:70745575-70745594 | None:intergenic | 40.0% | |
| CTGTCTGATACTGTGAATCA+AGG | + | chr3_3:70745582-70745601 | Msa0469060:CDS | 40.0% | |
| TAGGAGCAATTAAGGAAGTG+AGG | + | chr3_3:70745888-70745907 | Msa0469060:intron | 40.0% | |
| AGGAGCAATTAAGGAAGTGA+GGG | + | chr3_3:70745889-70745908 | Msa0469060:intron | 40.0% | |
| ! | CTCTGATTCCTTTTCTTCCA+TGG | - | chr3_3:70745920-70745939 | None:intergenic | 40.0% |
| CGACATAAGAGATGCTGAAA+AGG | + | chr3_3:70745955-70745974 | Msa0469060:CDS | 40.0% | |
| TTAACCGGGTAAACCACAAT+AGG | + | chr3_3:70746179-70746198 | Msa0469060:CDS | 40.0% | |
| CAATCCTATTGTGGTTTACC+CGG | - | chr3_3:70746186-70746205 | None:intergenic | 40.0% | |
| CCATTGAACCAATCCTATTG+TGG | - | chr3_3:70746195-70746214 | None:intergenic | 40.0% | |
| !! | CCACAATAGGATTGGTTCAA+TGG | + | chr3_3:70746192-70746211 | Msa0469060:CDS | 40.0% |
| ! | TGGTTCAATGGGTTCATTGA+AGG | + | chr3_3:70746204-70746223 | Msa0469060:CDS | 40.0% |
| ! | GGTTCAATGGGTTCATTGAA+GGG | + | chr3_3:70746205-70746224 | Msa0469060:CDS | 40.0% |
| TTGATCATGAGAGTCGTTCT+AGG | - | chr3_3:70746367-70746386 | None:intergenic | 40.0% | |
| AAGACGGACCTGTATTTGTT+GGG | - | chr3_3:70746397-70746416 | None:intergenic | 40.0% | |
| AAAGACGGACCTGTATTTGT+TGG | - | chr3_3:70746398-70746417 | None:intergenic | 40.0% | |
| ACAAAGTCATAGGAGGATAG+AGG | - | chr3_3:70746573-70746592 | None:intergenic | 40.0% | |
| AAGGTACACAAAGTCATAGG+AGG | - | chr3_3:70746580-70746599 | None:intergenic | 40.0% | |
| ! | AGGAAGGTACACAAAGTCAT+AGG | - | chr3_3:70746583-70746602 | None:intergenic | 40.0% |
| GGTAGATAGACGATGAACTT+CGG | + | chr3_3:70746655-70746674 | Msa0469060:intron | 40.0% | |
| ! | CTCCGACAAAAATTGGTAGT+CGG | + | chr3_3:70746681-70746700 | Msa0469060:intron | 40.0% |
| ! | TCCGACAAAAATTGGTAGTC+GGG | + | chr3_3:70746682-70746701 | Msa0469060:intron | 40.0% |
| ! | ACCCGACTACCAATTTTTGT+CGG | - | chr3_3:70746686-70746705 | None:intergenic | 40.0% |
| !! | AACTTTTGGGGATAGCGTTT+AGG | + | chr3_3:70746766-70746785 | Msa0469060:intron | 40.0% |
| ! | TCCAAGTGCTATCCAACTTT+TGG | + | chr3_3:70746801-70746820 | Msa0469060:intron | 40.0% |
| TCCAAAAGTTGGATAGCACT+TGG | - | chr3_3:70746805-70746824 | None:intergenic | 40.0% | |
| TGTGGAACAAGTCCAAAAGT+TGG | - | chr3_3:70746816-70746835 | None:intergenic | 40.0% | |
| AACAAATGCAACGTGGGATA+TGG | + | chr3_3:70746911-70746930 | Msa0469060:CDS | 40.0% | |
| TGTGAATATGACATCTCCTG+AGG | + | chr3_3:70746937-70746956 | Msa0469060:CDS | 40.0% | |
| AGTTAAAGACCTCCCAATGT+TGG | - | chr3_3:70746994-70747013 | None:intergenic | 40.0% | |
| TGACTTACTCATGTGGACAA+TGG | - | chr3_3:70747111-70747130 | None:intergenic | 40.0% | |
| CGTTATGTGACTTACTCATG+TGG | - | chr3_3:70747118-70747137 | None:intergenic | 40.0% | |
| AGATAATGCTCCATCTCACA+CGG | - | chr3_3:70747239-70747258 | None:intergenic | 40.0% | |
| TCGAGATGGGAAACAATTGA+CGG | + | chr3_3:70747280-70747299 | Msa0469060:CDS | 40.0% | |
| TGGAAGAAGGTCAAGATCAT+AGG | + | chr3_3:70747366-70747385 | Msa0469060:CDS | 40.0% | |
| GGAAGAAGGTCAAGATCATA+GGG | + | chr3_3:70747367-70747386 | Msa0469060:CDS | 40.0% | |
| !! | GGTTAAACTCTGGAGCAGTA+GGG | - | chr3_3:70745170-70745189 | None:intergenic | 45.0% |
| AGGACTAAGGAGAATAGAGC+GGG | - | chr3_3:70745289-70745308 | None:intergenic | 45.0% | |
| CAGGACTAAGGAGAATAGAG+CGG | - | chr3_3:70745290-70745309 | None:intergenic | 45.0% | |
| AAGCCGAAAGGTCTTTACGT+AGG | - | chr3_3:70745335-70745354 | None:intergenic | 45.0% | |
| CGTAAAGACCTTTCGGCTTT+CGG | + | chr3_3:70745336-70745355 | Msa0469060:CDS | 45.0% | |
| ACGGAATGAGTCCGTTTGAA+CGG | - | chr3_3:70745373-70745392 | None:intergenic | 45.0% | |
| ! | CAAACGGACTCATTCCGTAA+CGG | + | chr3_3:70745375-70745394 | Msa0469060:CDS | 45.0% |
| GAGCAGTTATGACTCCGTTA+CGG | - | chr3_3:70745392-70745411 | None:intergenic | 45.0% | |
| TGATCTTAGACACGCAGAGA+CGG | + | chr3_3:70745419-70745438 | Msa0469060:CDS | 45.0% | |
| GGGATACACCATGGAAGAAA+AGG | + | chr3_3:70745909-70745928 | Msa0469060:CDS | 45.0% | |
| CGGGTAAACCACAATAGGAT+TGG | + | chr3_3:70746184-70746203 | Msa0469060:CDS | 45.0% | |
| GTTCATTGAAGGGTGAAGAG+AGG | + | chr3_3:70746215-70746234 | Msa0469060:CDS | 45.0% | |
| !!! | AGAGTTTTGGGGAAAGTGCT+TGG | + | chr3_3:70746266-70746285 | Msa0469060:CDS | 45.0% |
| !! | GAAAGTGCTTGGAGTTGGAA+GGG | + | chr3_3:70746277-70746296 | Msa0469060:CDS | 45.0% |
| ! | AAAGTGCTTGGAGTTGGAAG+GGG | + | chr3_3:70746278-70746297 | Msa0469060:CDS | 45.0% |
| TCGGAAGCTCCGACAAAAAT+TGG | + | chr3_3:70746674-70746693 | Msa0469060:intron | 45.0% | |
| CGGGTTTCAAATACCGATCA+TGG | + | chr3_3:70746701-70746720 | Msa0469060:intron | 45.0% | |
| AGTACCATCACTATACGGCA+CGG | - | chr3_3:70746859-70746878 | None:intergenic | 45.0% | |
| TAGAATCTTAGCGTTGCCTC+AGG | - | chr3_3:70746956-70746975 | None:intergenic | 45.0% | |
| GGCAACGCTAAGATTCTACA+AGG | + | chr3_3:70746958-70746977 | Msa0469060:CDS | 45.0% | |
| GAACTCTTGCGTATGTGAGT+TGG | - | chr3_3:70747030-70747049 | None:intergenic | 45.0% | |
| ACTCACATACGCAAGAGTTC+AGG | + | chr3_3:70747030-70747049 | Msa0469060:CDS | 45.0% | |
| GATAATGCTCCATCTCACAC+GGG | - | chr3_3:70747238-70747257 | None:intergenic | 45.0% | |
| ! | TGTTTTCACCACCTCGAGAT+GGG | + | chr3_3:70747267-70747286 | Msa0469060:CDS | 45.0% |
| AATTGTTTCCCATCTCGAGG+TGG | - | chr3_3:70747278-70747297 | None:intergenic | 45.0% | |
| GTCAATTGTTTCCCATCTCG+AGG | - | chr3_3:70747281-70747300 | None:intergenic | 45.0% | |
| TCCTTCTGTAGCTGATGAGA+TGG | + | chr3_3:70747346-70747365 | Msa0469060:CDS | 45.0% | |
| TCCATCTCATCAGCTACAGA+AGG | - | chr3_3:70747350-70747369 | None:intergenic | 45.0% | |
| GTAGCTGATGAGATGGAAGA+AGG | + | chr3_3:70747353-70747372 | Msa0469060:CDS | 45.0% | |
| GAAGGTCAAGATCATAGGGT+AGG | + | chr3_3:70747371-70747390 | Msa0469060:CDS | 45.0% | |
| CAAGATCATAGGGTAGGTAG+TGG | + | chr3_3:70747377-70747396 | Msa0469060:CDS | 45.0% | |
| GACGTGATGAGCAGAAAAAG+TGG | + | chr3_3:70747407-70747426 | Msa0469060:CDS | 45.0% | |
| GTGATGAGCAGAAAAAGTGG+CGG | + | chr3_3:70747410-70747429 | Msa0469060:CDS | 45.0% | |
| !! | CTCTGGAGCAGTAGGGTTTA+AGG | - | chr3_3:70745163-70745182 | None:intergenic | 50.0% |
| !! | GGGTTAAACTCTGGAGCAGT+AGG | - | chr3_3:70745171-70745190 | None:intergenic | 50.0% |
| !! | GTGGGTATGGTGGATAGATG+CGG | - | chr3_3:70745267-70745286 | None:intergenic | 50.0% |
| CTAAGGAGAATAGAGCGGGT+GGG | - | chr3_3:70745285-70745304 | None:intergenic | 50.0% | |
| ACTAAGGAGAATAGAGCGGG+TGG | - | chr3_3:70745286-70745305 | None:intergenic | 50.0% | |
| CGAAGTCAGAGCCGTTCAAA+CGG | + | chr3_3:70745359-70745378 | Msa0469060:CDS | 50.0% | |
| GGTTGAAATACGCAGCACAG+AGG | - | chr3_3:70745473-70745492 | None:intergenic | 50.0% | |
| TAGCGGCGTGGGGAAAATTT+GGG | - | chr3_3:70745508-70745527 | None:intergenic | 50.0% | |
| AACTTGTCGCAGCTGATCAG+AGG | - | chr3_3:70745643-70745662 | None:intergenic | 50.0% | |
| AGGAAGTGAGGGATACACCA+TGG | + | chr3_3:70745900-70745919 | Msa0469060:CDS | 50.0% | |
| AATTGTGGTGAATGAGGGCG+TGG | - | chr3_3:70746139-70746158 | None:intergenic | 50.0% | |
| !! | TTGGGGAAAGTGCTTGGAGT+TGG | + | chr3_3:70746272-70746291 | Msa0469060:CDS | 50.0% |
| !! | GGAAAGTGCTTGGAGTTGGA+AGG | + | chr3_3:70746276-70746295 | Msa0469060:CDS | 50.0% |
| GCTCATTGCAGTGTACACAG+TGG | - | chr3_3:70746533-70746552 | None:intergenic | 50.0% | |
| GTACACTGCAATGAGCAGCT+AGG | + | chr3_3:70746537-70746556 | Msa0469060:CDS | 50.0% | |
| TAACCCGTGCCGTATAGTGA+TGG | + | chr3_3:70746852-70746871 | Msa0469060:intron | 50.0% | |
| GTACCATCACTATACGGCAC+GGG | - | chr3_3:70746858-70746877 | None:intergenic | 50.0% | |
| CTCAAAGTTCCCGTGTGAGA+TGG | + | chr3_3:70747226-70747245 | Msa0469060:CDS | 50.0% | |
| ! | GATGGAGCATTATCTGCCAG+TGG | + | chr3_3:70747244-70747263 | Msa0469060:CDS | 50.0% |
| ! | GTGTTTTCACCACCTCGAGA+TGG | + | chr3_3:70747266-70747285 | Msa0469060:CDS | 50.0% |
| ATTGACGGAGCCAATTCCAG+TGG | + | chr3_3:70747295-70747314 | Msa0469060:CDS | 50.0% | |
| GCGGGGAACATGCTACAAAT+TGG | + | chr3_3:70747317-70747336 | Msa0469060:CDS | 50.0% | |
| ! | GATCATAGGGTAGGTAGTGG+TGG | + | chr3_3:70747380-70747399 | Msa0469060:CDS | 50.0% |
| AGCAGAAAAAGTGGCGGCAT+AGG | + | chr3_3:70747416-70747435 | Msa0469060:CDS | 50.0% | |
| ATTCCCATACCAGTCGCCGT+CGG | + | chr3_3:70745201-70745220 | Msa0469060:CDS | 55.0% | |
| ATACCGACGGCGACTGGTAT+GGG | - | chr3_3:70745207-70745226 | None:intergenic | 55.0% | |
| AATACCGACGGCGACTGGTA+TGG | - | chr3_3:70745208-70745227 | None:intergenic | 55.0% | |
| GTAGGGGTAGGGAATACCGA+CGG | - | chr3_3:70745220-70745239 | None:intergenic | 55.0% | |
| !! | GGTATGGTGGATAGATGCGG+CGG | - | chr3_3:70745264-70745283 | None:intergenic | 55.0% |
| AATAGAGCGGGTGGGTATGG+TGG | - | chr3_3:70745277-70745296 | None:intergenic | 55.0% | |
| GAGAATAGAGCGGGTGGGTA+TGG | - | chr3_3:70745280-70745299 | None:intergenic | 55.0% | |
| CGTAGGTCAGTTTCAGGGGT+GGG | - | chr3_3:70745318-70745337 | None:intergenic | 55.0% | |
| ACGTAGGTCAGTTTCAGGGG+TGG | - | chr3_3:70745319-70745338 | None:intergenic | 55.0% | |
| TGACTTCGCCGAAAGCCGAA+AGG | - | chr3_3:70745347-70745366 | None:intergenic | 55.0% | |
| AATACGCAGCACAGAGGACG+TGG | - | chr3_3:70745467-70745486 | None:intergenic | 55.0% | |
| GTAGCGGCGTGGGGAAAATT+TGG | - | chr3_3:70745509-70745528 | None:intergenic | 55.0% | |
| !! | AGTACATAGTGGGCCCACAG+TGG | - | chr3_3:70745564-70745583 | None:intergenic | 55.0% |
| TGCAATGAGCAGCTAGGCGA+CGG | + | chr3_3:70746543-70746562 | Msa0469060:CDS | 55.0% | |
| AGGCCTTCCAGCACCAACAT+TGG | + | chr3_3:70746978-70746997 | Msa0469060:CDS | 55.0% | |
| GGCCTTCCAGCACCAACATT+GGG | + | chr3_3:70746979-70746998 | Msa0469060:CDS | 55.0% | |
| !! | CTCCCAATGTTGGTGCTGGA+AGG | - | chr3_3:70746984-70747003 | None:intergenic | 55.0% |
| CTTCCAGCACCAACATTGGG+AGG | + | chr3_3:70746982-70747001 | Msa0469060:CDS | 55.0% | |
| AGACCTCCCAATGTTGGTGC+TGG | - | chr3_3:70746988-70747007 | None:intergenic | 55.0% | |
| CGAGGTGGTGAAAACACCAC+TGG | - | chr3_3:70747263-70747282 | None:intergenic | 55.0% | |
| ATGTTCCCCGCCACTGGAAT+TGG | - | chr3_3:70747308-70747327 | None:intergenic | 55.0% | |
| TAGGGAATACCGACGGCGAC+TGG | - | chr3_3:70745213-70745232 | None:intergenic | 60.0% | |
| GCATAGGGTGGGTAGGGGTA+GGG | - | chr3_3:70745231-70745250 | None:intergenic | 60.0% | |
| TGACGGCATAGGGTGGGTAG+GGG | - | chr3_3:70745236-70745255 | None:intergenic | 60.0% | |
| GTGACGGCATAGGGTGGGTA+GGG | - | chr3_3:70745237-70745256 | None:intergenic | 60.0% | |
| !! | ATGGTGGATAGATGCGGCGG+CGG | - | chr3_3:70745261-70745280 | None:intergenic | 60.0% |
| GTCAGTTTCAGGGGTGGGAG+GGG | - | chr3_3:70745313-70745332 | None:intergenic | 60.0% | |
| GGTCAGTTTCAGGGGTGGGA+GGG | - | chr3_3:70745314-70745333 | None:intergenic | 60.0% | |
| AGGTCAGTTTCAGGGGTGGG+AGG | - | chr3_3:70745315-70745334 | None:intergenic | 60.0% | |
| ACACGCAGAGACGGCGTTTG+CGG | + | chr3_3:70745428-70745447 | Msa0469060:CDS | 60.0% | |
| !! | GCGGGGAAGGAGGTGGATTA+AGG | - | chr3_3:70746102-70746121 | None:intergenic | 60.0% |
| TGGAGAAAATCGCCGTCGCG+GGG | - | chr3_3:70746119-70746138 | None:intergenic | 60.0% | |
| GTGGAGAAAATCGCCGTCGC+GGG | - | chr3_3:70746120-70746139 | None:intergenic | 60.0% | |
| CGTGGAGAAAATCGCCGTCG+CGG | - | chr3_3:70746121-70746140 | None:intergenic | 60.0% | |
| GACGGAGCCAATTCCAGTGG+CGG | + | chr3_3:70747298-70747317 | Msa0469060:CDS | 60.0% | |
| ACGGAGCCAATTCCAGTGGC+GGG | + | chr3_3:70747299-70747318 | Msa0469060:CDS | 60.0% | |
| TGTAGCATGTTCCCCGCCAC+TGG | - | chr3_3:70747314-70747333 | None:intergenic | 60.0% | |
| GGCATAGGGTGGGTAGGGGT+AGG | - | chr3_3:70745232-70745251 | None:intergenic | 65.0% | |
| CGTGACGGCATAGGGTGGGT+AGG | - | chr3_3:70745238-70745257 | None:intergenic | 65.0% | |
| ATCCACCTCCTTCCCCGCGA+CGG | + | chr3_3:70746104-70746123 | Msa0469060:CDS | 65.0% | |
| GAAAATCGCCGTCGCGGGGA+AGG | - | chr3_3:70746115-70746134 | None:intergenic | 65.0% | |
| CGGAGCCAATTCCAGTGGCG+GGG | + | chr3_3:70747300-70747319 | Msa0469060:CDS | 65.0% | |
| GCGGCGTGACGGCATAGGGT+GGG | - | chr3_3:70745242-70745261 | None:intergenic | 70.0% | |
| TAGATGCGGCGGCGGCGTGA+CGG | - | chr3_3:70745253-70745272 | None:intergenic | 70.0% | |
| GGGTGGGAGGGGCAGGACTA+AGG | - | chr3_3:70745302-70745321 | None:intergenic | 70.0% | |
| GTTTCAGGGGTGGGAGGGGC+AGG | - | chr3_3:70745309-70745328 | None:intergenic | 70.0% | |
| ACACCGGCGACGAGACCTGG+CGG | - | chr3_3:70745540-70745559 | None:intergenic | 70.0% | |
| ! | TCGTCGCCGGTGTGCCACTG+TGG | + | chr3_3:70745547-70745566 | Msa0469060:CDS | 70.0% |
| ! | CGTCGCCGGTGTGCCACTGT+GGG | + | chr3_3:70745548-70745567 | Msa0469060:CDS | 70.0% |
| GTGGGCCCACAGTGGCACAC+CGG | - | chr3_3:70745556-70745575 | None:intergenic | 70.0% | |
| AATCGCCGTCGCGGGGAAGG+AGG | - | chr3_3:70746112-70746131 | None:intergenic | 70.0% | |
| GGCGGCGTGACGGCATAGGG+TGG | - | chr3_3:70745243-70745262 | None:intergenic | 75.0% | |
| GGCGGCGGCGTGACGGCATA+GGG | - | chr3_3:70745246-70745265 | None:intergenic | 75.0% | |
| ! | GCTGCGGAGGTAGCGGCGTG+GGG | - | chr3_3:70745518-70745537 | None:intergenic | 75.0% |
| ! | GGCTGCGGAGGTAGCGGCGT+GGG | - | chr3_3:70745519-70745538 | None:intergenic | 75.0% |
| CCTGGCGGCTGCGGAGGTAG+CGG | - | chr3_3:70745525-70745544 | None:intergenic | 75.0% | |
| ACGAGACCTGGCGGCTGCGG+AGG | - | chr3_3:70745531-70745550 | None:intergenic | 75.0% | |
| GCGACGAGACCTGGCGGCTG+CGG | - | chr3_3:70745534-70745553 | None:intergenic | 75.0% | |
| CAGCCGCCAGGTCTCGTCGC+CGG | + | chr3_3:70745534-70745553 | Msa0469060:CDS | 75.0% | |
| GGCACACCGGCGACGAGACC+TGG | - | chr3_3:70745543-70745562 | None:intergenic | 75.0% | |
| ! | CGGCGGCGGCGTGACGGCAT+AGG | - | chr3_3:70745247-70745266 | None:intergenic | 80.0% |
| !! | CGGCTGCGGAGGTAGCGGCG+TGG | - | chr3_3:70745520-70745539 | None:intergenic | 80.0% |
| ! | CCGCTACCTCCGCAGCCGCC+AGG | + | chr3_3:70745522-70745541 | Msa0469060:CDS | 80.0% |
| ! | CGCCGTCGCGGGGAAGGAGG+TGG | - | chr3_3:70746109-70746128 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 70745150 | 70747475 | 70745150 | ID=Msa0469060;Name=Msa0469060 |
| chr3_3 | mRNA | 70745150 | 70747475 | 70745150 | ID=Msa0469060-mRNA-1;Parent=Msa0469060;Name=Msa0469060-mRNA-1;_AED=0.02;_eAED=0.03;_QI=0|0.75|0.2|1|1|1|5|0|526 |
| chr3_3 | exon | 70745150 | 70745675 | 70745150 | ID=Msa0469060-mRNA-1:exon:17246;Parent=Msa0469060-mRNA-1 |
| chr3_3 | exon | 70745891 | 70746407 | 70745891 | ID=Msa0469060-mRNA-1:exon:17247;Parent=Msa0469060-mRNA-1 |
| chr3_3 | exon | 70746500 | 70746613 | 70746500 | ID=Msa0469060-mRNA-1:exon:17248;Parent=Msa0469060-mRNA-1 |
| chr3_3 | exon | 70746910 | 70747051 | 70746910 | ID=Msa0469060-mRNA-1:exon:17249;Parent=Msa0469060-mRNA-1 |
| chr3_3 | exon | 70747194 | 70747475 | 70747194 | ID=Msa0469060-mRNA-1:exon:17250;Parent=Msa0469060-mRNA-1 |
| chr3_3 | CDS | 70745150 | 70745675 | 70745150 | ID=Msa0469060-mRNA-1:cds;Parent=Msa0469060-mRNA-1 |
| chr3_3 | CDS | 70745891 | 70746407 | 70745891 | ID=Msa0469060-mRNA-1:cds;Parent=Msa0469060-mRNA-1 |
| chr3_3 | CDS | 70746500 | 70746613 | 70746500 | ID=Msa0469060-mRNA-1:cds;Parent=Msa0469060-mRNA-1 |
| chr3_3 | CDS | 70746910 | 70747051 | 70746910 | ID=Msa0469060-mRNA-1:cds;Parent=Msa0469060-mRNA-1 |
| chr3_3 | CDS | 70747194 | 70747475 | 70747194 | ID=Msa0469060-mRNA-1:cds;Parent=Msa0469060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
