AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0266370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0266370 MtrunA17_Chr2g0331701 100.000 94 0 0 1 94 1 94 3.84e-64 188
Msa0266370 MtrunA17_Chr4g0004631 96.809 94 3 0 1 94 1 94 1.09e-62 184
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0266370 AT3G16080.1 88.298 94 11 0 1 94 1 94 7.58e-57 170
Msa0266370 AT1G52300.1 88.298 94 11 0 1 94 1 94 1.80e-56 169
Msa0266370 AT1G15250.2 87.234 94 12 0 1 94 1 94 9.47e-56 167
Msa0266370 AT1G15250.1 87.234 94 12 0 1 94 1 94 9.47e-56 167
Msa0266370 AT3G16080.2 93.333 45 3 0 1 45 1 45 9.96e-25 89.0

Find 50 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATAACAAAGATTATCTTAC+TGG 0.230330 2_2:+66853513 None:intergenic
AAACTGAATGTGCATGTAAA+TGG 0.248433 2_2:+66853420 None:intergenic
AGTTTCCTGCTCTAGGGTTT+TGG 0.256161 2_2:-66854378 Msa0266370:five_prime_UTR
ATTACTAGTTTGGATTTAAA+TGG 0.272367 2_2:-66853575 Msa0266370:three_prime_UTR
ATTAGTTTGTTGTTTGTGAT+TGG 0.353715 2_2:-66853712 Msa0266370:three_prime_UTR
CTCTAAAACCGCTCTTGAAT+CGG 0.373242 2_2:+66853932 None:intergenic
GTTGTGTGGCATTACTAGTT+TGG 0.378335 2_2:-66853585 Msa0266370:three_prime_UTR
AATGAAGATAAATGCTCTAA+TGG 0.394604 2_2:+66853366 None:intergenic
AAGCAGAGCATCTACTCTTC+TGG 0.402579 2_2:+66854154 None:intergenic
AAACTATTTCATTGTTCAAT+CGG 0.406070 2_2:-66853612 Msa0266370:three_prime_UTR
CTTACCCAGCTGCTCGTGTT+AGG 0.412584 2_2:-66854128 Msa0266370:CDS
TTAGTTTGTTGTTTGTGATT+GGG 0.419657 2_2:-66853711 Msa0266370:three_prime_UTR
TACTGGAGATATTATCATAA+TGG 0.425604 2_2:+66853530 None:intergenic
CATTTCCTAACACGAGCAGC+TGG 0.431351 2_2:+66854123 None:intergenic
TAGTTTGTTGTTTGTGATTG+GGG 0.440836 2_2:-66853710 Msa0266370:three_prime_UTR
ATTTCATTGTTCAATCGGTT+CGG 0.448438 2_2:-66853607 Msa0266370:three_prime_UTR
GAATTGCAGGGTAAGGGAAC+TGG 0.450011 2_2:-66854246 Msa0266370:intron
CGTAGAAAGACTACTGGAAC+TGG 0.453204 2_2:-66853985 Msa0266370:CDS
AATAATCAGTTTCCTGCTCT+AGG 0.459023 2_2:-66854385 None:intergenic
TTTAGATAACTGGAGTGAAA+AGG 0.467360 2_2:-66854013 Msa0266370:intron
CAGTTCCAGTAGTCTTTCTA+CGG 0.470228 2_2:+66853986 None:intergenic
GGTAAGGGAACTGGAAGTTT+CGG 0.474527 2_2:-66854237 Msa0266370:CDS
AGACTCACACACTCTGTGTC+AGG 0.478990 2_2:-66854200 Msa0266370:CDS
AGATAATCTTTGTTATGTAA+AGG 0.486435 2_2:-66853507 Msa0266370:three_prime_UTR
AACTGAATGTGCATGTAAAT+GGG 0.508300 2_2:+66853421 None:intergenic
ATAATCAGTTTCCTGCTCTA+GGG 0.509806 2_2:-66854384 None:intergenic
TGAAGCTGCACCTAGGAAGA+AGG 0.512832 2_2:-66853799 Msa0266370:CDS
TGTTGTTTGTGATTGGGGCA+AGG 0.514030 2_2:-66853705 Msa0266370:three_prime_UTR
GTTCAATCGGTTCGGTTGTG+TGG 0.517376 2_2:-66853599 Msa0266370:three_prime_UTR
CGATTCCAAAACCCTAGAGC+AGG 0.522259 2_2:+66854373 None:intergenic
AGCATCTACTCTTCTGGAGA+TGG 0.532321 2_2:+66854160 None:intergenic
GCAATCCGTAGAAAGACTAC+TGG 0.532707 2_2:-66853991 Msa0266370:CDS
GTGAATGAATTGCAGGGTAA+GGG 0.538112 2_2:-66854252 Msa0266370:intron
GACGCAGCTCCCTTCTTCCT+AGG 0.557312 2_2:+66853789 None:intergenic
GAAGCTGCACCTAGGAAGAA+GGG 0.598975 2_2:-66853798 Msa0266370:CDS
CACACACTCTGTGTCAGGTG+TGG 0.600659 2_2:-66854195 Msa0266370:CDS
TGTGGTTTGATTCTATAACA+TGG 0.604854 2_2:-66853472 Msa0266370:three_prime_UTR
CTACTGGAACTGGTAGGATG+AGG 0.613944 2_2:-66853975 Msa0266370:CDS
CTGGAAGTTTCGGTAAGAGA+AGG 0.618981 2_2:-66854227 Msa0266370:CDS
CAGGAACTGAAGCTGCACCT+AGG 0.634185 2_2:-66853806 Msa0266370:CDS
AATCGGCTTTGCATCTACAA+TGG 0.635890 2_2:-66854355 Msa0266370:intron
ATTTCCTAACACGAGCAGCT+GGG 0.638199 2_2:+66854124 None:intergenic
GAAAGACTACTGGAACTGGT+AGG 0.653500 2_2:-66853981 Msa0266370:CDS
AATACCCAACAAAACAACAA+TGG 0.655819 2_2:+66853750 None:intergenic
TCTGGAGATGGAAACTGCGG+CGG 0.656436 2_2:+66854172 None:intergenic
TCTTCTGGAGATGGAAACTG+CGG 0.675301 2_2:+66854169 None:intergenic
GTTCCTCGCCGATTCAAGAG+CGG 0.676604 2_2:-66853940 Msa0266370:CDS
AAACCGCTCTTGAATCGGCG+AGG 0.683649 2_2:+66853937 None:intergenic
ACCAAAGTACAAAACCAATG+AGG 0.688571 2_2:+66853658 None:intergenic
TCTATAACATGGATACAGTG+TGG 0.731407 2_2:-66853461 Msa0266370:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTAATTTGATTTGTAATT+AGG - chr2_2:66853650-66853669 Msa0266370:three_prime_UTR 15.0%
!!! GTTAATTTGATTTGTAATTA+GGG - chr2_2:66853651-66853670 Msa0266370:three_prime_UTR 15.0%
!!! GGTTTTTTTTTTTTTAATAC+AGG - chr2_2:66853907-66853926 Msa0266370:intron 15.0%
!!! TGTTAATTTGATTTGTAATT+AGG - chr2_2:66853650-66853669 Msa0266370:three_prime_UTR 15.0%
!!! GTTAATTTGATTTGTAATTA+GGG - chr2_2:66853651-66853670 Msa0266370:three_prime_UTR 15.0%
!!! GGTTTTTTTTTTTTTAATAC+AGG - chr2_2:66853907-66853926 Msa0266370:intron 15.0%
!!! GATTATTGATTTTAGATAAC+TGG - chr2_2:66853709-66853728 Msa0266370:three_prime_UTR 20.0%
!! AAACTATTTCATTGTTCAAT+CGG - chr2_2:66854120-66854139 Msa0266370:intron 20.0%
!!! ATTACTAGTTTGGATTTAAA+TGG - chr2_2:66854157-66854176 Msa0266370:CDS 20.0%
!!! AGATAATCTTTGTTATGTAA+AGG - chr2_2:66854225-66854244 Msa0266370:CDS 20.0%
!!! GATTATTGATTTTAGATAAC+TGG - chr2_2:66853709-66853728 Msa0266370:three_prime_UTR 20.0%
!! AAACTATTTCATTGTTCAAT+CGG - chr2_2:66854120-66854139 Msa0266370:intron 20.0%
!!! ATTACTAGTTTGGATTTAAA+TGG - chr2_2:66854157-66854176 Msa0266370:CDS 20.0%
!!! AGATAATCTTTGTTATGTAA+AGG - chr2_2:66854225-66854244 Msa0266370:CDS 20.0%
!! TATAGATTGATGATAGATGA+AGG + chr2_2:66853418-66853437 None:intergenic 25.0%
! AATTAGGGTTTATGTATGTT+TGG - chr2_2:66853666-66853685 Msa0266370:three_prime_UTR 25.0%
!!! ATTAGTTTGTTGTTTGTGAT+TGG - chr2_2:66854020-66854039 Msa0266370:intron 25.0%
!!! TTAGTTTGTTGTTTGTGATT+GGG - chr2_2:66854021-66854040 Msa0266370:intron 25.0%
! TACTGGAGATATTATCATAA+TGG + chr2_2:66854205-66854224 None:intergenic 25.0%
! CATAACAAAGATTATCTTAC+TGG + chr2_2:66854222-66854241 None:intergenic 25.0%
! AATGAAGATAAATGCTCTAA+TGG + chr2_2:66854369-66854388 None:intergenic 25.0%
!! TATAGATTGATGATAGATGA+AGG + chr2_2:66853418-66853437 None:intergenic 25.0%
! AATTAGGGTTTATGTATGTT+TGG - chr2_2:66853666-66853685 Msa0266370:three_prime_UTR 25.0%
!!! ATTAGTTTGTTGTTTGTGAT+TGG - chr2_2:66854020-66854039 Msa0266370:intron 25.0%
!!! TTAGTTTGTTGTTTGTGATT+GGG - chr2_2:66854021-66854040 Msa0266370:intron 25.0%
! TACTGGAGATATTATCATAA+TGG + chr2_2:66854205-66854224 None:intergenic 25.0%
! CATAACAAAGATTATCTTAC+TGG + chr2_2:66854222-66854241 None:intergenic 25.0%
! AATGAAGATAAATGCTCTAA+TGG + chr2_2:66854369-66854388 None:intergenic 25.0%
GTTTATGTGAATGAATTGCA+GGG - chr2_2:66853474-66853493 Msa0266370:three_prime_UTR 30.0%
TTTAGATAACTGGAGTGAAA+AGG - chr2_2:66853719-66853738 Msa0266370:three_prime_UTR 30.0%
CCACAACATATCAATGATTA+AGG + chr2_2:66853889-66853908 None:intergenic 30.0%
CCTTAATCATTGATATGTTG+TGG - chr2_2:66853886-66853905 Msa0266370:intron 30.0%
!!! TTTGACCATTGTTGTTTTGT+TGG - chr2_2:66853977-66853996 Msa0266370:CDS 30.0%
!!! TTGACCATTGTTGTTTTGTT+GGG - chr2_2:66853978-66853997 Msa0266370:CDS 30.0%
AATACCCAACAAAACAACAA+TGG + chr2_2:66853985-66854004 None:intergenic 30.0%
!! TAGTTTGTTGTTTGTGATTG+GGG - chr2_2:66854022-66854041 Msa0266370:intron 30.0%
ATTTCATTGTTCAATCGGTT+CGG - chr2_2:66854125-66854144 Msa0266370:CDS 30.0%
!! TAAAGGTAGTTTGAGTTTTG+TGG - chr2_2:66854242-66854261 Msa0266370:intron 30.0%
TGTGGTTTGATTCTATAACA+TGG - chr2_2:66854260-66854279 Msa0266370:intron 30.0%
AACTGAATGTGCATGTAAAT+GGG + chr2_2:66854314-66854333 None:intergenic 30.0%
AAACTGAATGTGCATGTAAA+TGG + chr2_2:66854315-66854334 None:intergenic 30.0%
GTTTATGTGAATGAATTGCA+GGG - chr2_2:66853474-66853493 Msa0266370:three_prime_UTR 30.0%
TTTAGATAACTGGAGTGAAA+AGG - chr2_2:66853719-66853738 Msa0266370:three_prime_UTR 30.0%
CCACAACATATCAATGATTA+AGG + chr2_2:66853889-66853908 None:intergenic 30.0%
CCTTAATCATTGATATGTTG+TGG - chr2_2:66853886-66853905 Msa0266370:intron 30.0%
!!! TTTGACCATTGTTGTTTTGT+TGG - chr2_2:66853977-66853996 Msa0266370:CDS 30.0%
!!! TTGACCATTGTTGTTTTGTT+GGG - chr2_2:66853978-66853997 Msa0266370:CDS 30.0%
AATACCCAACAAAACAACAA+TGG + chr2_2:66853985-66854004 None:intergenic 30.0%
!! TAGTTTGTTGTTTGTGATTG+GGG - chr2_2:66854022-66854041 Msa0266370:intron 30.0%
ATTTCATTGTTCAATCGGTT+CGG - chr2_2:66854125-66854144 Msa0266370:CDS 30.0%
!! TAAAGGTAGTTTGAGTTTTG+TGG - chr2_2:66854242-66854261 Msa0266370:intron 30.0%
TGTGGTTTGATTCTATAACA+TGG - chr2_2:66854260-66854279 Msa0266370:intron 30.0%
AACTGAATGTGCATGTAAAT+GGG + chr2_2:66854314-66854333 None:intergenic 30.0%
AAACTGAATGTGCATGTAAA+TGG + chr2_2:66854315-66854334 None:intergenic 30.0%
! AGATTGATGATAGATGAAGG+AGG + chr2_2:66853415-66853434 None:intergenic 35.0%
CTATACGATTTCGTATATGC+TGG - chr2_2:66853433-66853452 Msa0266370:three_prime_UTR 35.0%
CGTTTATGTGAATGAATTGC+AGG - chr2_2:66853473-66853492 Msa0266370:three_prime_UTR 35.0%
! TATTGTTTTCACTGCCTCAT+TGG - chr2_2:66854060-66854079 Msa0266370:intron 35.0%
ACCAAAGTACAAAACCAATG+AGG + chr2_2:66854077-66854096 None:intergenic 35.0%
TCTATAACATGGATACAGTG+TGG - chr2_2:66854271-66854290 Msa0266370:intron 35.0%
! AGATTGATGATAGATGAAGG+AGG + chr2_2:66853415-66853434 None:intergenic 35.0%
CTATACGATTTCGTATATGC+TGG - chr2_2:66853433-66853452 Msa0266370:three_prime_UTR 35.0%
CGTTTATGTGAATGAATTGC+AGG - chr2_2:66853473-66853492 Msa0266370:three_prime_UTR 35.0%
! TATTGTTTTCACTGCCTCAT+TGG - chr2_2:66854060-66854079 Msa0266370:intron 35.0%
ACCAAAGTACAAAACCAATG+AGG + chr2_2:66854077-66854096 None:intergenic 35.0%
TCTATAACATGGATACAGTG+TGG - chr2_2:66854271-66854290 Msa0266370:intron 35.0%
! AATCGGCTTTGCATCTACAA+TGG - chr2_2:66853377-66853396 Msa0266370:three_prime_UTR 40.0%
TGATGATAGATGAAGGAGGA+AGG + chr2_2:66853411-66853430 None:intergenic 40.0%
TGTGAATGAATTGCAGGGTA+AGG - chr2_2:66853479-66853498 Msa0266370:three_prime_UTR 40.0%
GTGAATGAATTGCAGGGTAA+GGG - chr2_2:66853480-66853499 Msa0266370:three_prime_UTR 40.0%
CAGTTCCAGTAGTCTTTCTA+CGG + chr2_2:66853749-66853768 None:intergenic 40.0%
!! CTCTAAAACCGCTCTTGAAT+CGG + chr2_2:66853803-66853822 None:intergenic 40.0%
!!! ATTCAAGAGCGGTTTTAGAG+AGG - chr2_2:66853803-66853822 Msa0266370:CDS 40.0%
!!! TTCAAGAGCGGTTTTAGAGA+GGG - chr2_2:66853804-66853823 Msa0266370:CDS 40.0%
!!! GCCTCATTGGTTTTGTACTT+TGG - chr2_2:66854073-66854092 Msa0266370:intron 40.0%
GTTGTGTGGCATTACTAGTT+TGG - chr2_2:66854147-66854166 Msa0266370:CDS 40.0%
! AATCGGCTTTGCATCTACAA+TGG - chr2_2:66853377-66853396 Msa0266370:three_prime_UTR 40.0%
TGATGATAGATGAAGGAGGA+AGG + chr2_2:66853411-66853430 None:intergenic 40.0%
TGTGAATGAATTGCAGGGTA+AGG - chr2_2:66853479-66853498 Msa0266370:three_prime_UTR 40.0%
GTGAATGAATTGCAGGGTAA+GGG - chr2_2:66853480-66853499 Msa0266370:three_prime_UTR 40.0%
CAGTTCCAGTAGTCTTTCTA+CGG + chr2_2:66853749-66853768 None:intergenic 40.0%
!! CTCTAAAACCGCTCTTGAAT+CGG + chr2_2:66853803-66853822 None:intergenic 40.0%
!!! ATTCAAGAGCGGTTTTAGAG+AGG - chr2_2:66853803-66853822 Msa0266370:CDS 40.0%
!!! TTCAAGAGCGGTTTTAGAGA+GGG - chr2_2:66853804-66853823 Msa0266370:CDS 40.0%
!!! GCCTCATTGGTTTTGTACTT+TGG - chr2_2:66854073-66854092 Msa0266370:intron 40.0%
GTTGTGTGGCATTACTAGTT+TGG - chr2_2:66854147-66854166 Msa0266370:CDS 40.0%
!!! CTGCTCTAGGGTTTTGGAAT+CGG - chr2_2:66853360-66853379 Msa0266370:three_prime_UTR 45.0%
GGTAAGGGAACTGGAAGTTT+CGG - chr2_2:66853495-66853514 Msa0266370:three_prime_UTR 45.0%
CTGGAAGTTTCGGTAAGAGA+AGG - chr2_2:66853505-66853524 Msa0266370:three_prime_UTR 45.0%
! TCTTCTGGAGATGGAAACTG+CGG + chr2_2:66853566-66853585 None:intergenic 45.0%
! AGCATCTACTCTTCTGGAGA+TGG + chr2_2:66853575-66853594 None:intergenic 45.0%
! AAGCAGAGCATCTACTCTTC+TGG + chr2_2:66853581-66853600 None:intergenic 45.0%
ATTTCCTAACACGAGCAGCT+GGG + chr2_2:66853611-66853630 None:intergenic 45.0%
GCAATCCGTAGAAAGACTAC+TGG - chr2_2:66853741-66853760 Msa0266370:three_prime_UTR 45.0%
CGTAGAAAGACTACTGGAAC+TGG - chr2_2:66853747-66853766 Msa0266370:three_prime_UTR 45.0%
GAAAGACTACTGGAACTGGT+AGG - chr2_2:66853751-66853770 Msa0266370:three_prime_UTR 45.0%
! TGTTGTTTGTGATTGGGGCA+AGG - chr2_2:66854027-66854046 Msa0266370:intron 45.0%
!!! CTGCTCTAGGGTTTTGGAAT+CGG - chr2_2:66853360-66853379 Msa0266370:three_prime_UTR 45.0%
GGTAAGGGAACTGGAAGTTT+CGG - chr2_2:66853495-66853514 Msa0266370:three_prime_UTR 45.0%
CTGGAAGTTTCGGTAAGAGA+AGG - chr2_2:66853505-66853524 Msa0266370:three_prime_UTR 45.0%
! TCTTCTGGAGATGGAAACTG+CGG + chr2_2:66853566-66853585 None:intergenic 45.0%
! AGCATCTACTCTTCTGGAGA+TGG + chr2_2:66853575-66853594 None:intergenic 45.0%
! AAGCAGAGCATCTACTCTTC+TGG + chr2_2:66853581-66853600 None:intergenic 45.0%
ATTTCCTAACACGAGCAGCT+GGG + chr2_2:66853611-66853630 None:intergenic 45.0%
GCAATCCGTAGAAAGACTAC+TGG - chr2_2:66853741-66853760 Msa0266370:three_prime_UTR 45.0%
CGTAGAAAGACTACTGGAAC+TGG - chr2_2:66853747-66853766 Msa0266370:three_prime_UTR 45.0%
GAAAGACTACTGGAACTGGT+AGG - chr2_2:66853751-66853770 Msa0266370:three_prime_UTR 45.0%
! TGTTGTTTGTGATTGGGGCA+AGG - chr2_2:66854027-66854046 Msa0266370:intron 45.0%
CGATTCCAAAACCCTAGAGC+AGG + chr2_2:66853362-66853381 None:intergenic 50.0%
GAATTGCAGGGTAAGGGAAC+TGG - chr2_2:66853486-66853505 Msa0266370:three_prime_UTR 50.0%
AGACTCACACACTCTGTGTC+AGG - chr2_2:66853532-66853551 Msa0266370:three_prime_UTR 50.0%
CATTTCCTAACACGAGCAGC+TGG + chr2_2:66853612-66853631 None:intergenic 50.0%
CTACTGGAACTGGTAGGATG+AGG - chr2_2:66853757-66853776 Msa0266370:three_prime_UTR 50.0%
TGAAGCTGCACCTAGGAAGA+AGG - chr2_2:66853933-66853952 Msa0266370:CDS 50.0%
GAAGCTGCACCTAGGAAGAA+GGG - chr2_2:66853934-66853953 Msa0266370:CDS 50.0%
!! GTTCAATCGGTTCGGTTGTG+TGG - chr2_2:66854133-66854152 Msa0266370:CDS 50.0%
CGATTCCAAAACCCTAGAGC+AGG + chr2_2:66853362-66853381 None:intergenic 50.0%
GAATTGCAGGGTAAGGGAAC+TGG - chr2_2:66853486-66853505 Msa0266370:three_prime_UTR 50.0%
AGACTCACACACTCTGTGTC+AGG - chr2_2:66853532-66853551 Msa0266370:three_prime_UTR 50.0%
CATTTCCTAACACGAGCAGC+TGG + chr2_2:66853612-66853631 None:intergenic 50.0%
CTACTGGAACTGGTAGGATG+AGG - chr2_2:66853757-66853776 Msa0266370:three_prime_UTR 50.0%
TGAAGCTGCACCTAGGAAGA+AGG - chr2_2:66853933-66853952 Msa0266370:CDS 50.0%
GAAGCTGCACCTAGGAAGAA+GGG - chr2_2:66853934-66853953 Msa0266370:CDS 50.0%
!! GTTCAATCGGTTCGGTTGTG+TGG - chr2_2:66854133-66854152 Msa0266370:CDS 50.0%
CACACACTCTGTGTCAGGTG+TGG - chr2_2:66853537-66853556 Msa0266370:three_prime_UTR 55.0%
TCTGGAGATGGAAACTGCGG+CGG + chr2_2:66853563-66853582 None:intergenic 55.0%
CTTACCCAGCTGCTCGTGTT+AGG - chr2_2:66853604-66853623 Msa0266370:three_prime_UTR 55.0%
!! GTTCCTCGCCGATTCAAGAG+CGG - chr2_2:66853792-66853811 Msa0266370:CDS 55.0%
AAACCGCTCTTGAATCGGCG+AGG + chr2_2:66853798-66853817 None:intergenic 55.0%
CAGGAACTGAAGCTGCACCT+AGG - chr2_2:66853926-66853945 Msa0266370:intron 55.0%
CACACACTCTGTGTCAGGTG+TGG - chr2_2:66853537-66853556 Msa0266370:three_prime_UTR 55.0%
TCTGGAGATGGAAACTGCGG+CGG + chr2_2:66853563-66853582 None:intergenic 55.0%
CTTACCCAGCTGCTCGTGTT+AGG - chr2_2:66853604-66853623 Msa0266370:three_prime_UTR 55.0%
!! GTTCCTCGCCGATTCAAGAG+CGG - chr2_2:66853792-66853811 Msa0266370:CDS 55.0%
AAACCGCTCTTGAATCGGCG+AGG + chr2_2:66853798-66853817 None:intergenic 55.0%
CAGGAACTGAAGCTGCACCT+AGG - chr2_2:66853926-66853945 Msa0266370:intron 55.0%
GACGCAGCTCCCTTCTTCCT+AGG + chr2_2:66853946-66853965 None:intergenic 60.0%
GACGCAGCTCCCTTCTTCCT+AGG + chr2_2:66853946-66853965 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 66853355 66854399 66853355 ID=Msa0266370;Name=Msa0266370
chr2_2 mRNA 66853355 66854399 66853355 ID=Msa0266370-mRNA-1;Parent=Msa0266370;Name=Msa0266370-mRNA-1;_AED=0.06;_eAED=0.06;_QI=41|1|1|1|1|1|4|427|94
chr2_2 exon 66853355 66853825 66853355 ID=Msa0266370-mRNA-1:exon:21275;Parent=Msa0266370-mRNA-1
chr2_2 exon 66853929 66854030 66853929 ID=Msa0266370-mRNA-1:exon:21274;Parent=Msa0266370-mRNA-1
chr2_2 exon 66854124 66854259 66854124 ID=Msa0266370-mRNA-1:exon:21273;Parent=Msa0266370-mRNA-1
chr2_2 exon 66854356 66854399 66854356 ID=Msa0266370-mRNA-1:exon:21272;Parent=Msa0266370-mRNA-1
chr2_2 five_prime_UTR 66854359 66854399 66854359 ID=Msa0266370-mRNA-1:five_prime_utr;Parent=Msa0266370-mRNA-1
chr2_2 CDS 66854356 66854358 66854356 ID=Msa0266370-mRNA-1:cds;Parent=Msa0266370-mRNA-1
chr2_2 CDS 66854124 66854259 66854124 ID=Msa0266370-mRNA-1:cds;Parent=Msa0266370-mRNA-1
chr2_2 CDS 66853929 66854030 66853929 ID=Msa0266370-mRNA-1:cds;Parent=Msa0266370-mRNA-1
chr2_2 CDS 66853782 66853825 66853782 ID=Msa0266370-mRNA-1:cds;Parent=Msa0266370-mRNA-1
chr2_2 three_prime_UTR 66853355 66853781 66853355 ID=Msa0266370-mRNA-1:three_prime_utr;Parent=Msa0266370-mRNA-1
Gene Sequence

>Msa0266370

ATGGGTAAGGGAACTGGAAGTTTCGGTAAGAGAAGGAACAAGACTCACACACTCTGTGTCAGGTGTGGCCGCCGCAGTTTCCATCTCCAGAAGAGTAGATGCTCTGCTTGTGCTTACCCAGCTGCTCGTGTTAGGAAATATAACTGGAGTGAAAAGGCAATCCGTAGAAAGACTACTGGAACTGGTAGGATGAGGTACTTGCGCAACGTTCCTCGCCGATTCAAGAGCGGTTTTAGAGAGGGAACTGAAGCTGCACCTAGGAAGAAGGGAGCTGCGTCTGCTTAA
Protein sequence

>Msa0266370

MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSEKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRKKGAASA*