AlfalfaGEDB | Msa0483110

M. sativa cultivar zhongmu-4 / Msa0483110

KEGG: K02912
GO: GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0015934 GO:0022625 GO:0022626 GO:0031974 GO:0031981 GO:0032991 GO:0042788 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044391 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0070013 GO:1990904
PFAM: PF01655.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0483110	XP_024625350.1	98.496	133	2	0	1	133	1	133	4.78e-92	272

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0483110	sp\|P49211\|RL321_ARATH	87.970	133	16	0	1	133	1	133	1.05e-86	251

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0483110	I3SPQ1	98.496	133	2	0	1	133	1	133	2.28e-92	272

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0002750	Msa0483110	0.873493	1.409468e-67	-8.615850e-47
Msa0002790	Msa0483110	0.873078	1.942177e-67	-8.615850e-47
Msa0003780	Msa0483110	0.848797	4.874015e-60	-8.615850e-47
Msa0022970	Msa0483110	0.862937	3.556661e-64	-8.615850e-47
Msa0032780	Msa0483110	0.841727	3.988298e-58	-8.615850e-47
Msa0032810	Msa0483110	0.800351	1.501303e-48	-8.615850e-47
Msa0040690	Msa0483110	0.808948	2.409829e-50	-8.615850e-47
Msa0045730	Msa0483110	0.901979	1.547977e-78	-8.615850e-47
Msa0048180	Msa0483110	0.820439	6.854599e-53	-8.615850e-47
Msa0052790	Msa0483110	0.816939	4.269374e-52	-8.615850e-47
Msa0074030	Msa0483110	0.810235	1.274904e-50	-8.615850e-47
Msa0086750	Msa0483110	0.820906	5.353311e-53	-8.615850e-47
Msa0097580	Msa0483110	0.817396	3.369531e-52	-8.615850e-47
Msa0116130	Msa0483110	0.865028	7.947231e-65	-8.615850e-47
Msa0116670	Msa0483110	0.841361	4.977829e-58	-8.615850e-47
Msa0118710	Msa0483110	0.852864	3.489370e-61	-8.615850e-47
Msa0128860	Msa0483110	0.809270	2.055898e-50	-8.615850e-47
Msa0133540	Msa0483110	0.866339	3.065405e-65	-8.615850e-47
Msa0140890	Msa0483110	0.827618	1.416239e-54	-8.615850e-47
Msa0146340	Msa0483110	0.877445	6.250041e-69	-8.615850e-47
Msa0163760	Msa0483110	0.815250	1.017726e-51	-8.615850e-47
Msa0172900	Msa0483110	0.814060	1.867127e-51	-8.615850e-47
Msa0173530	Msa0483110	0.838133	3.445501e-57	-8.615850e-47
Msa0174730	Msa0483110	0.807308	5.385482e-50	-8.615850e-47
Msa0181490	Msa0483110	0.859126	5.131087e-63	-8.615850e-47
Msa0187930	Msa0483110	0.840222	9.903369e-58	-8.615850e-47
Msa0192230	Msa0483110	0.811598	6.462848e-51	-8.615850e-47
Msa0192750	Msa0483110	0.805559	1.259274e-49	-8.615850e-47
Msa0194540	Msa0483110	0.830867	2.305678e-55	-8.615850e-47
Msa0210330	Msa0483110	0.812174	4.842009e-51	-8.615850e-47
Msa0210360	Msa0483110	0.829346	5.419038e-55	-8.615850e-47
Msa0218830	Msa0483110	0.869525	2.900194e-66	-8.615850e-47
Msa0219120	Msa0483110	0.867801	1.046798e-65	-8.615850e-47
Msa0221030	Msa0483110	0.815712	8.030957e-52	-8.615850e-47
Msa0222730	Msa0483110	0.855563	5.801146e-62	-8.615850e-47
Msa0224560	Msa0483110	0.818425	1.973116e-52	-8.615850e-47
Msa0230490	Msa0483110	0.876110	1.811984e-68	-8.615850e-47
Msa0443390	Msa0483110	0.855042	8.227760e-62	-8.615850e-47
Msa0481850	Msa0483110	0.890441	9.824497e-74	-8.615850e-47
Msa0244780	Msa0483110	0.846249	2.446237e-59	-8.615850e-47
Msa0250820	Msa0483110	0.837741	4.345522e-57	-8.615850e-47
Msa0258850	Msa0483110	0.864189	1.454229e-64	-8.615850e-47
Msa0264010	Msa0483110	0.896591	3.184722e-76	-8.615850e-47
Msa0268130	Msa0483110	0.831039	2.091806e-55	-8.615850e-47
Msa0283390	Msa0483110	0.809186	2.142938e-50	-8.615850e-47
Msa0289580	Msa0483110	0.881042	3.334152e-70	-8.615850e-47
Msa0289610	Msa0483110	0.886377	3.607027e-72	-8.615850e-47
Msa0297830	Msa0483110	0.836126	1.123419e-56	-8.615850e-47
Msa0298200	Msa0483110	0.866953	1.954464e-65	-8.615850e-47
Msa0298990	Msa0483110	0.836907	7.107464e-57	-8.615850e-47
Msa0300350	Msa0483110	0.808757	2.648082e-50	-8.615850e-47
Msa0306690	Msa0483110	0.856382	3.342131e-62	-8.615850e-47
Msa0313100	Msa0483110	0.803977	2.694498e-49	-8.615850e-47
Msa0317910	Msa0483110	0.821264	4.429294e-53	-8.615850e-47
Msa0321640	Msa0483110	0.837294	5.657916e-57	-8.615850e-47
Msa0327300	Msa0483110	0.897320	1.575948e-76	-8.615850e-47
Msa0327330	Msa0483110	0.904493	1.158907e-79	-8.615850e-47
Msa0335840	Msa0483110	0.833767	4.414407e-56	-8.615850e-47
Msa0336010	Msa0483110	0.862862	3.752880e-64	-8.615850e-47
Msa0337670	Msa0483110	0.869568	2.808547e-66	-8.615850e-47
Msa0342850	Msa0483110	0.819676	1.024887e-52	-8.615850e-47
Msa0348830	Msa0483110	0.880277	6.265270e-70	-8.615850e-47
Msa0483110	Msa0526540	0.856796	2.524862e-62	-8.615850e-47
Msa0483110	Msa0527150	0.834914	2.275720e-56	-8.615850e-47
Msa0483110	Msa0531650	0.804364	2.238766e-49	-8.615850e-47
Msa0483110	Msa0534750	0.801583	8.409861e-49	-8.615850e-47
Msa0483110	Msa0571920	0.810515	1.109518e-50	-8.615850e-47
Msa0483110	Msa0576940	0.862820	3.865324e-64	-8.615850e-47
Msa0483110	Msa0588360	0.806570	7.714645e-50	-8.615850e-47
Msa0483110	Msa0603320	0.811506	6.766907e-51	-8.615850e-47
Msa0483110	Msa0615440	0.813095	3.043767e-51	-8.615850e-47
Msa0483110	Msa0622750	0.907221	6.405573e-81	-8.615850e-47
Msa0483110	Msa0623200	0.909579	4.875197e-82	-8.615850e-47
Msa0483110	Msa0666230	0.827179	1.805193e-54	-8.615850e-47
Msa0483110	Msa0688850	0.801658	8.116487e-49	-8.615850e-47
Msa0483110	Msa0698490	0.810456	1.142663e-50	-8.615850e-47
Msa0483110	Msa0698660	0.813497	2.484135e-51	-8.615850e-47
Msa0483110	Msa0698780	0.802010	6.872844e-49	-8.615850e-47
Msa0483110	Msa0705800	0.809760	1.613327e-50	-8.615850e-47
Msa0483110	Msa0706500	0.813898	2.027695e-51	-8.615850e-47
Msa0483110	Msa0712610	0.890201	1.220783e-73	-8.615850e-47
Msa0483110	Msa0729200	0.846184	2.547600e-59	-8.615850e-47
Msa0483110	Msa0738100	0.828738	7.609069e-55	-8.615850e-47
Msa0483110	Msa0766080	0.812823	3.491698e-51	-8.615850e-47
Msa0483110	Msa0769590	0.848547	5.719474e-60	-8.615850e-47
Msa0483110	Msa0780490	0.830010	3.736093e-55	-8.615850e-47
Msa0483110	Msa0781080	0.865485	5.707460e-65	-8.615850e-47
Msa0483110	Msa0785130	0.864166	1.478089e-64	-8.615850e-47
Msa0483110	Msa0789930	0.803404	3.543318e-49	-8.615850e-47
Msa0483110	Msa0792420	0.835650	1.483354e-56	-8.615850e-47
Msa0483110	Msa0806880	0.853950	1.702928e-61	-8.615850e-47
Msa0483110	Msa0817540	0.844395	7.762252e-59	-8.615850e-47
Msa0483110	Msa0827380	0.830009	3.738736e-55	-8.615850e-47
Msa0483110	Msa0867060	0.822726	2.029872e-53	-8.615850e-47
Msa0483110	Msa0876170	0.828704	7.754515e-55	-8.615850e-47
Msa0483110	Msa0888810	0.835774	1.379334e-56	-8.615850e-47
Msa0483110	Msa0945480	0.845916	3.013712e-59	-8.615850e-47
Msa0483110	Msa0953310	0.820909	5.346171e-53	-8.615850e-47
Msa0483110	Msa1010310	0.852531	4.341728e-61	-8.615850e-47
Msa0483110	Msa1012740	0.828923	6.863243e-55	-8.615850e-47
Msa0483110	Msa1019240	0.840786	7.050609e-58	-8.615850e-47
Msa0483110	Msa1019260	0.832323	1.009101e-55	-8.615850e-47
Msa0483110	Msa1021120	0.818559	1.840307e-52	-8.615850e-47
Msa0483110	Msa1039520	0.830970	2.175975e-55	-8.615850e-47
Msa0483110	Msa1040160	0.801634	8.207279e-49	-8.615850e-47
Msa0483110	Msa1042780	0.832295	1.025748e-55	-8.615850e-47
Msa0483110	Msa1043690	0.858176	9.857095e-63	-8.615850e-47
Msa0483110	Msa1048690	0.815273	1.005987e-51	-8.615850e-47
Msa0483110	Msa1072710	0.819660	1.033748e-52	-8.615850e-47
Msa0483110	Msa1080350	0.896735	2.773935e-76	-8.615850e-47
Msa0483110	Msa1083370	0.811255	7.670467e-51	-8.615850e-47
Msa0483110	Msa1088490	0.861940	7.207409e-64	-8.615850e-47
Msa0483110	Msa1094380	0.808356	3.224363e-50	-8.615850e-47
Msa0483110	Msa1104140	0.822532	2.252071e-53	-8.615850e-47
Msa0483110	Msa1104210	0.836267	1.034435e-56	-8.615850e-47
Msa0483110	Msa1125860	0.895489	9.130421e-76	-8.615850e-47
Msa0483110	Msa1126060	0.890018	1.439137e-73	-8.615850e-47
Msa0483110	Msa1126520	0.840131	1.045985e-57	-8.615850e-47
Msa0483110	Msa1128120	0.807857	4.117655e-50	-8.615850e-47
Msa0483110	Msa1135890	0.821357	4.214323e-53	-8.615850e-47
Msa0483110	Msa1143510	0.810360	1.198301e-50	-8.615850e-47
Msa0483110	Msa1166860	0.803776	2.966277e-49	-8.615850e-47
Msa0483110	Msa1166870	0.842124	3.130978e-58	-8.615850e-47
Msa0483110	Msa1167540	0.816005	6.911821e-52	-8.615850e-47
Msa0483110	Msa1167550	0.820182	7.850231e-53	-8.615850e-47
Msa0483110	Msa1173160	0.808477	3.038436e-50	-8.615850e-47
Msa0483110	Msa1181830	0.811991	5.307593e-51	-8.615850e-47
Msa0483110	Msa1181850	0.800207	1.605796e-48	-8.615850e-47
Msa0483110	Msa1186030	0.807581	4.712502e-50	-8.615850e-47
Msa0483110	Msa1208020	0.820190	7.817939e-53	-8.615850e-47
Msa0483110	Msa1215820	0.869898	2.192663e-66	-8.615850e-47
Msa0483110	Msa1230580	0.804850	1.772305e-49	-8.615850e-47
Msa0483110	Msa1256840	0.830800	2.395265e-55	-8.615850e-47
Msa0483110	Msa1256950	0.808078	3.696187e-50	-8.615850e-47
Msa0483110	Msa1257510	0.809035	2.309062e-50	-8.615850e-47
Msa0483110	Msa1262890	0.811161	8.040984e-51	-8.615850e-47
Msa0483110	Msa1266060	0.820511	6.599450e-53	-8.615850e-47
Msa0483110	Msa1273340	0.837607	4.704684e-57	-8.615850e-47
Msa0483110	Msa1295150	0.825292	5.075898e-54	-8.615850e-47
Msa0483110	Msa1295170	0.822663	2.099529e-53	-8.615850e-47
Msa0483110	Msa1311400	0.803170	3.962010e-49	-8.615850e-47
Msa0483110	Msa1329540	0.808298	3.317394e-50	-8.615850e-47
Msa0483110	Msa1332250	0.824742	6.846635e-54	-8.615850e-47
Msa0483110	Msa1338190	0.860875	1.521965e-63	-8.615850e-47
Msa0483110	Msa1340980	0.802755	4.825620e-49	-8.615850e-47
Msa0483110	Msa1349570	0.860734	1.679692e-63	-8.615850e-47
Msa0483110	Msa1356790	0.898551	4.750583e-77	-8.615850e-47
Msa0483110	Msa1362790	0.862795	3.935087e-64	-8.615850e-47
Msa0483110	Msa1363330	0.856359	3.393716e-62	-8.615850e-47
Msa0483110	Msa1366180	0.854678	1.049237e-61	-8.615850e-47
Msa0483110	Msa1369190	0.855133	7.736844e-62	-8.615850e-47
Msa0483110	Msa1374120	0.833885	4.123515e-56	-8.615850e-47
Msa0483110	Msa1379760	0.817655	2.947067e-52	-8.615850e-47
Msa0483110	Msa1386600	0.855849	4.786794e-62	-8.615850e-47
Msa0483110	Msa1387410	0.825729	3.999352e-54	-8.615850e-47
Msa0483110	Msa1392590	0.867518	1.290411e-65	-8.615850e-47
Msa0483110	Msa1399530	0.857099	2.054864e-62	-8.615850e-47
Msa0483110	Msa1406080	0.829334	5.457328e-55	-8.615850e-47
Msa0483110	Msa1407070	0.844903	5.666180e-59	-8.615850e-47
Msa0483110	Msa1410440	0.826574	2.517580e-54	-8.615850e-47
Msa0483110	Msa1413500	0.858345	8.780305e-63	-8.615850e-47
Msa0483110	Msa1426120	0.802381	5.763500e-49	-8.615850e-47
Msa0483110	Msa1426370	0.808216	3.453387e-50	-8.615850e-47
Msa0483110	Msa1426490	0.862218	5.921469e-64	-8.615850e-47
Msa0483110	Msa1427560	0.827394	1.602966e-54	-8.615850e-47
Msa0483110	Msa1428810	0.835711	1.430935e-56	-8.615850e-47
Msa0483110	Msa1448690	0.834968	2.204677e-56	-8.615850e-47
Msa0483110	Msa1456050	0.840985	6.252080e-58	-8.615850e-47
Msa0483110	Msa1462860	0.823321	1.475216e-53	-8.615850e-47
Msa0483110	Msa1465260	0.840313	9.372106e-58	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0483110	MtrunA17_Chr7g0234631	98.496	133	2	0	1	133	1	133	4.40e-96	272
Msa0483110	MtrunA17_Chr8g0352341	98.496	133	2	0	1	133	1	133	1.57e-95	271
Msa0483110	MtrunA17_Chr7g0215831	96.992	133	4	0	1	133	1	133	2.64e-94	268
Msa0483110	MtrunA17_Chr8g0378631	66.917	133	10	1	1	133	1	99	1.80e-54	166

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa0483110	AT4G18100.1	87.970	133	16	1	133	1	133	1.07e-87	251
Msa0483110	AT5G46430.2	85.714	133	19	1	133	1	133	1.18e-86	248
Msa0483110	AT5G46430.1	85.714	133	19	1	133	1	133	1.18e-86	248

Find 51 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATACTTTGTTAAGAGTATTT+TGG	0.254227	3_3:+90894704	Msa0483110:three_prime_UTR
TTCTTAGAATTGTTGTCTAA+TGG	0.261760	3_3:+90894634	Msa0483110:three_prime_UTR
ACTATCCTTCCAACAAAATA+AGG	0.289373	3_3:-90892566	None:intergenic
CGTTGAACGTGCAGCTCAAT+TGG	0.326038	3_3:+90894493	Msa0483110:CDS
TTGATGCCAAACATTGGATA+TGG	0.326130	3_3:+90894231	Msa0483110:CDS
ATTGGGTCGGTATTTCGTTA+TGG	0.346250	3_3:-90892605	None:intergenic
TTGGGTCGGTATTTCGTTAT+GGG	0.358865	3_3:-90892604	None:intergenic
GTGTTATAATGCGGTTTCTT+TGG	0.361011	3_3:+90894805	Msa0483110:three_prime_UTR
TGTGCACAATGTCCAGGATT+TGG	0.380353	3_3:+90894305	Msa0483110:CDS
AGGGTATTGATTCCCGTGTT+AGG	0.396188	3_3:+90894187	Msa0483110:CDS
GCGCAACCTGGCGAGCTTGT+TGG	0.407725	3_3:-90894528	None:intergenic
TCTGAGCCATATCCAATGTT+TGG	0.407849	3_3:-90894237	None:intergenic
GAAGGCACTAATAGAGAACT+AGG	0.427007	3_3:-90892646	None:intergenic
ACAAACTTCTTGAAACCATT+AGG	0.435341	3_3:-90894282	None:intergenic
ACCCGCCACTATCTGCCTAA+TGG	0.462229	3_3:+90894267	Msa0483110:CDS
TCATCAAAAGTTCCAAATCC+TGG	0.470149	3_3:-90894317	None:intergenic
TGAAACCATTAGGCAGATAG+TGG	0.475780	3_3:-90894272	None:intergenic
GTTTGTTGTGCACAATGTCC+AGG	0.477032	3_3:+90894299	Msa0483110:CDS
GCAAAGCTGGCGTAGGCCAA+AGG	0.477684	3_3:+90894167	Msa0483110:intron
TTGTCACCAACAAGCTCGCC+AGG	0.480042	3_3:+90894522	Msa0483110:CDS
ACACGGGAATCAATACCCTT+TGG	0.483819	3_3:-90894183	None:intergenic
CAAAGCTGGCGTAGGCCAAA+GGG	0.488390	3_3:+90894168	Msa0483110:CDS
AGCGTGTCAAGAGGTTCATC+AGG	0.489670	3_3:+90893131	Msa0483110:CDS
GGATTACTGTGTTTGAATCC+TGG	0.502969	3_3:+90894655	Msa0483110:three_prime_UTR
AAACAATCAAATATCGGAGC+AGG	0.507975	3_3:-90894774	None:intergenic
CTTTGAACTTACGCCTAACA+CGG	0.510702	3_3:-90894200	None:intergenic
GTTATGGTATGCAGCAAAGC+TGG	0.513607	3_3:+90894154	Msa0483110:intron
CGTGTTAGGCGTAAGTTCAA+AGG	0.520936	3_3:+90894201	Msa0483110:CDS
AGAGACAAGGTAAGATAAGA+TGG	0.529645	3_3:+90893075	Msa0483110:intron
AATAAGGCGCACAAGAAGAA+AGG	0.530198	3_3:+90892520	None:intergenic
GTTACTTTGATGCCAAACAT+TGG	0.535195	3_3:+90894225	Msa0483110:CDS
TCATCAGGCCTCAAAGTGAC+AGG	0.536054	3_3:+90893146	Msa0483110:CDS
ACCATTAGGCAGATAGTGGC+GGG	0.544473	3_3:-90894268	None:intergenic
GTCTTCTTGACTGCGCAACC+TGG	0.546687	3_3:-90894540	None:intergenic
ATAATCTTCTTAGTTAGCAG+AGG	0.547700	3_3:-90893103	None:intergenic
TGTGTCAACCAGGAAAAGAA+AGG	0.574402	3_3:+90894466	Msa0483110:CDS
GTAGTGAATATGAATTGGGT+CGG	0.576546	3_3:-90892618	None:intergenic
AGATGTAACAAAGAAGAAGA+AGG	0.580877	3_3:-90892664	None:intergenic
AAACTGCGCGCTGTTCAACC+AGG	0.600336	3_3:+90892694	Msa0483110:five_prime_UTR
TGACAGGAAAATATGTGTCA+AGG	0.606818	3_3:+90893162	Msa0483110:CDS
TGCTGTTTATGGGATGAACA+TGG	0.606999	3_3:+90894601	Msa0483110:three_prime_UTR
TTTGAACTTACGCCTAACAC+GGG	0.609080	3_3:-90894199	None:intergenic
AACCATTAGGCAGATAGTGG+CGG	0.617842	3_3:-90894269	None:intergenic
GCACAAGAAGAAAGGAGGGT+GGG	0.622391	3_3:+90892528	Msa0483110:five_prime_UTR
GTATGCAGCAAAGCTGGCGT+AGG	0.627909	3_3:+90894160	Msa0483110:intron
AAGGCGCACAAGAAGAAAGG+AGG	0.635574	3_3:+90892523	None:intergenic
CGCACAAGAAGAAAGGAGGG+TGG	0.635837	3_3:+90892527	None:intergenic
TTATCAAGAAGCGTGTCAAG+AGG	0.643611	3_3:+90893122	Msa0483110:CDS
TCGCACACAATGTGTCAACC+AGG	0.659311	3_3:+90894456	Msa0483110:CDS
AAGGCACTAATAGAGAACTA+GGG	0.664583	3_3:-90892645	None:intergenic
AGGCGCACAAGAAGAAAGGA+GGG	0.678571	3_3:+90892524	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTAAATTTTCTGAAATCT+TGG	+	chr3_3:90892911-90892930	Msa0483110:intron	15.0%
!!!	TATAATTTTTCACTATGATT+TGG	+	chr3_3:90892941-90892960	Msa0483110:intron	15.0%
!!	AACTTATAAAAGTAATAAGT+CGG	+	chr3_3:90893586-90893605	Msa0483110:intron	15.0%
!!	GTTAGGATAATAAATTAAAT+TGG	+	chr3_3:90893835-90893854	Msa0483110:intron	15.0%
!!	GAATGAAAGTAAAAAATAAA+AGG	-	chr3_3:90894054-90894073	None:intergenic	15.0%
!!!	TTTTAAATTTTCTGAAATCT+TGG	+	chr3_3:90892911-90892930	Msa0483110:intron	15.0%
!!!	TATAATTTTTCACTATGATT+TGG	+	chr3_3:90892941-90892960	Msa0483110:intron	15.0%
!!	AACTTATAAAAGTAATAAGT+CGG	+	chr3_3:90893586-90893605	Msa0483110:intron	15.0%
!!	GTTAGGATAATAAATTAAAT+TGG	+	chr3_3:90893835-90893854	Msa0483110:intron	15.0%
!!	GAATGAAAGTAAAAAATAAA+AGG	-	chr3_3:90894054-90894073	None:intergenic	15.0%
!!!	AAGAAATTTCCTTATTTTGT+TGG	+	chr3_3:90892557-90892576	Msa0483110:five_prime_UTR	20.0%
!!!	TTTTGTAGTGAATATGAATT+GGG	-	chr3_3:90892625-90892644	None:intergenic	20.0%
!!	GAATAAACAAAACACAATAA+AGG	-	chr3_3:90892780-90892799	None:intergenic	20.0%
!!	AGCAGATAAATACAATAAAT+TGG	-	chr3_3:90892889-90892908	None:intergenic	20.0%
!!	AATCTAGTTATAGTGTATTA+AGG	-	chr3_3:90893287-90893306	None:intergenic	20.0%
!!!	TTTTGTTTGATTTCTGTTTT+TGG	+	chr3_3:90893350-90893369	Msa0483110:intron	20.0%
!!!	TATTTTACATGATGTTCATT+TGG	+	chr3_3:90893384-90893403	Msa0483110:intron	20.0%
!!!	CTCAAGTTTTTATTTCAATT+AGG	-	chr3_3:90893521-90893540	None:intergenic	20.0%
!!	AATTGAAATAAAAACTTGAG+TGG	+	chr3_3:90893521-90893540	Msa0483110:intron	20.0%
!!	ACTTATAAAAGTAATAAGTC+GGG	+	chr3_3:90893587-90893606	Msa0483110:intron	20.0%
!!	TAATTTGAAAGCAACAAATT+AGG	-	chr3_3:90893679-90893698	None:intergenic	20.0%
!!	ACAAAATGCAATAGAAAAAT+TGG	-	chr3_3:90893990-90894009	None:intergenic	20.0%
!!	AGTAAAAAATAAAAGGTAAC+AGG	-	chr3_3:90894047-90894066	None:intergenic	20.0%
!!!	TTTTAACATTGTTACTGTTA+TGG	+	chr3_3:90894138-90894157	Msa0483110:intron	20.0%
!!!	ATACTTTGTTAAGAGTATTT+TGG	+	chr3_3:90894704-90894723	Msa0483110:three_prime_UTR	20.0%
!!	CACAAAAAACAATCAAATAT+CGG	-	chr3_3:90894783-90894802	None:intergenic	20.0%
!!!	AAGAAATTTCCTTATTTTGT+TGG	+	chr3_3:90892557-90892576	Msa0483110:five_prime_UTR	20.0%
!!!	TTTTGTAGTGAATATGAATT+GGG	-	chr3_3:90892625-90892644	None:intergenic	20.0%
!!	GAATAAACAAAACACAATAA+AGG	-	chr3_3:90892780-90892799	None:intergenic	20.0%
!!	AGCAGATAAATACAATAAAT+TGG	-	chr3_3:90892889-90892908	None:intergenic	20.0%
!!	AATCTAGTTATAGTGTATTA+AGG	-	chr3_3:90893287-90893306	None:intergenic	20.0%
!!!	TTTTGTTTGATTTCTGTTTT+TGG	+	chr3_3:90893350-90893369	Msa0483110:intron	20.0%
!!!	TATTTTACATGATGTTCATT+TGG	+	chr3_3:90893384-90893403	Msa0483110:intron	20.0%
!!!	CTCAAGTTTTTATTTCAATT+AGG	-	chr3_3:90893521-90893540	None:intergenic	20.0%
!!	AATTGAAATAAAAACTTGAG+TGG	+	chr3_3:90893521-90893540	Msa0483110:intron	20.0%
!!	ACTTATAAAAGTAATAAGTC+GGG	+	chr3_3:90893587-90893606	Msa0483110:intron	20.0%
!!	TAATTTGAAAGCAACAAATT+AGG	-	chr3_3:90893679-90893698	None:intergenic	20.0%
!!	ACAAAATGCAATAGAAAAAT+TGG	-	chr3_3:90893990-90894009	None:intergenic	20.0%
!!	AGTAAAAAATAAAAGGTAAC+AGG	-	chr3_3:90894047-90894066	None:intergenic	20.0%
!!!	TTTTAACATTGTTACTGTTA+TGG	+	chr3_3:90894138-90894157	Msa0483110:intron	20.0%
!!!	ATACTTTGTTAAGAGTATTT+TGG	+	chr3_3:90894704-90894723	Msa0483110:three_prime_UTR	20.0%
!!	CACAAAAAACAATCAAATAT+CGG	-	chr3_3:90894783-90894802	None:intergenic	20.0%
!!!	AATTTCCTTATTTTGTTGGA+AGG	+	chr3_3:90892561-90892580	Msa0483110:five_prime_UTR	25.0%
!!	GTTTTGTAGTGAATATGAAT+TGG	-	chr3_3:90892626-90892645	None:intergenic	25.0%
!	CAATAAACAATGTTAACGAA+CGG	-	chr3_3:90892730-90892749	None:intergenic	25.0%
!!	TTTTCTACCGTTTATCAAAA+AGG	-	chr3_3:90892822-90892841	None:intergenic	25.0%
!	AGAAAATTTGAACTGAGTTA+TGG	+	chr3_3:90892836-90892855	Msa0483110:intron	25.0%
!!	TGCTTTTGTTCAATGTTTTT+AGG	+	chr3_3:90892984-90893003	Msa0483110:intron	25.0%
!!!	GCTTTTGTTCAATGTTTTTA+GGG	+	chr3_3:90892985-90893004	Msa0483110:intron	25.0%
!!!	TGGTTCAAATTTTTTACAAG+TGG	+	chr3_3:90893404-90893423	Msa0483110:intron	25.0%
!!!	TCAAATTTTTTACAAGTGGA+AGG	+	chr3_3:90893408-90893427	Msa0483110:intron	25.0%
!!!	CAAATTTTTTACAAGTGGAA+GGG	+	chr3_3:90893409-90893428	Msa0483110:intron	25.0%
!	TCAAGTTTCTTCACAATTTA+GGG	+	chr3_3:90893650-90893669	Msa0483110:intron	25.0%
!	AAATTAACGCATCAAAATAG+TGG	-	chr3_3:90893745-90893764	None:intergenic	25.0%
!!!	TTGATGCGTTAATTTTGTTT+TGG	+	chr3_3:90893750-90893769	Msa0483110:intron	25.0%
!	AATAAGCTACATTAGTATGA+GGG	-	chr3_3:90893906-90893925	None:intergenic	25.0%
!	AAATAAGCTACATTAGTATG+AGG	-	chr3_3:90893907-90893926	None:intergenic	25.0%
!!	CTTTGTTTATTTACATCTTC+AGG	+	chr3_3:90894417-90894436	Msa0483110:intron	25.0%
!!!	ATTTTTGCTTTTGCTGTTTA+TGG	+	chr3_3:90894590-90894609	Msa0483110:three_prime_UTR	25.0%
!!!	TTTTTGCTTTTGCTGTTTAT+GGG	+	chr3_3:90894591-90894610	Msa0483110:three_prime_UTR	25.0%
!	TTCTTAGAATTGTTGTCTAA+TGG	+	chr3_3:90894634-90894653	Msa0483110:three_prime_UTR	25.0%
!!!	AATTTCCTTATTTTGTTGGA+AGG	+	chr3_3:90892561-90892580	Msa0483110:five_prime_UTR	25.0%
!!	GTTTTGTAGTGAATATGAAT+TGG	-	chr3_3:90892626-90892645	None:intergenic	25.0%
!	CAATAAACAATGTTAACGAA+CGG	-	chr3_3:90892730-90892749	None:intergenic	25.0%
!!	TTTTCTACCGTTTATCAAAA+AGG	-	chr3_3:90892822-90892841	None:intergenic	25.0%
!	AGAAAATTTGAACTGAGTTA+TGG	+	chr3_3:90892836-90892855	Msa0483110:intron	25.0%
!!	TGCTTTTGTTCAATGTTTTT+AGG	+	chr3_3:90892984-90893003	Msa0483110:intron	25.0%
!!!	GCTTTTGTTCAATGTTTTTA+GGG	+	chr3_3:90892985-90893004	Msa0483110:intron	25.0%
!!!	TGGTTCAAATTTTTTACAAG+TGG	+	chr3_3:90893404-90893423	Msa0483110:intron	25.0%
!!!	TCAAATTTTTTACAAGTGGA+AGG	+	chr3_3:90893408-90893427	Msa0483110:intron	25.0%
!!!	CAAATTTTTTACAAGTGGAA+GGG	+	chr3_3:90893409-90893428	Msa0483110:intron	25.0%
!	TCAAGTTTCTTCACAATTTA+GGG	+	chr3_3:90893650-90893669	Msa0483110:intron	25.0%
!	AAATTAACGCATCAAAATAG+TGG	-	chr3_3:90893745-90893764	None:intergenic	25.0%
!!!	TTGATGCGTTAATTTTGTTT+TGG	+	chr3_3:90893750-90893769	Msa0483110:intron	25.0%
!	AATAAGCTACATTAGTATGA+GGG	-	chr3_3:90893906-90893925	None:intergenic	25.0%
!	AAATAAGCTACATTAGTATG+AGG	-	chr3_3:90893907-90893926	None:intergenic	25.0%
!!	CTTTGTTTATTTACATCTTC+AGG	+	chr3_3:90894417-90894436	Msa0483110:intron	25.0%
!!!	ATTTTTGCTTTTGCTGTTTA+TGG	+	chr3_3:90894590-90894609	Msa0483110:three_prime_UTR	25.0%
!!!	TTTTTGCTTTTGCTGTTTAT+GGG	+	chr3_3:90894591-90894610	Msa0483110:three_prime_UTR	25.0%
!	TTCTTAGAATTGTTGTCTAA+TGG	+	chr3_3:90894634-90894653	Msa0483110:three_prime_UTR	25.0%
	ACTATCCTTCCAACAAAATA+AGG	-	chr3_3:90892569-90892588	None:intergenic	30.0%
	AGATGTAACAAAGAAGAAGA+AGG	-	chr3_3:90892667-90892686	None:intergenic	30.0%
!	TCTCGATCCTTTTTGATAAA+CGG	+	chr3_3:90892812-90892831	Msa0483110:intron	30.0%
!!!	GATCTCTACTGTTTTTTTGT+TGG	+	chr3_3:90893021-90893040	Msa0483110:intron	30.0%
!	TGTTATGTTTTGTAGAGACA+AGG	+	chr3_3:90893062-90893081	Msa0483110:intron	30.0%
	ATAATCTTCTTAGTTAGCAG+AGG	-	chr3_3:90893106-90893125	None:intergenic	30.0%
	ACTTTGACACAATAAATCAC+TGG	-	chr3_3:90893235-90893254	None:intergenic	30.0%
	CATATGTAGAAATGCTTCTT+AGG	+	chr3_3:90893327-90893346	Msa0483110:intron	30.0%
!!!	TTTGATTTCTGTTTTTGGAG+AGG	+	chr3_3:90893355-90893374	Msa0483110:intron	30.0%
!	AGTTTTTCTTGTAGTGAAGT+GGG	+	chr3_3:90893471-90893490	Msa0483110:intron	30.0%
!	TAGAACCCAATGCATTTTAA+CGG	-	chr3_3:90893565-90893584	None:intergenic	30.0%
	ATCTCACCATTAAAATGCAT+TGG	-	chr3_3:90893614-90893633	None:intergenic	30.0%
	AAATTGTGAAGAAACTTGAG+AGG	-	chr3_3:90893649-90893668	None:intergenic	30.0%
	CTCAAGTTTCTTCACAATTT+AGG	+	chr3_3:90893649-90893668	Msa0483110:intron	30.0%
	CAAGTTTCTTCACAATTTAG+GGG	+	chr3_3:90893651-90893670	Msa0483110:intron	30.0%
!!!	CATGCTTTTTAAGTGTTGTT+AGG	+	chr3_3:90893818-90893837	Msa0483110:intron	30.0%
	GACACAATACACTTTAAATC+TGG	-	chr3_3:90893945-90893964	None:intergenic	30.0%
	GCAATAGAAAAATTGGTAGA+AGG	-	chr3_3:90893983-90894002	None:intergenic	30.0%
	TGTATATACAGAACAGCAAA+TGG	-	chr3_3:90894076-90894095	None:intergenic	30.0%
!!	ATTTGCTGTTCTGTATATAC+AGG	+	chr3_3:90894075-90894094	Msa0483110:intron	30.0%
!	TGTTTTGCATATTGAATCCT+CGG	+	chr3_3:90894105-90894124	Msa0483110:intron	30.0%
	ACAAACTTCTTGAAACCATT+AGG	-	chr3_3:90894285-90894304	None:intergenic	30.0%
!	TTTTGTGCTGTGTTATAATG+CGG	+	chr3_3:90894796-90894815	Msa0483110:three_prime_UTR	30.0%
	ACTATCCTTCCAACAAAATA+AGG	-	chr3_3:90892569-90892588	None:intergenic	30.0%
	AGATGTAACAAAGAAGAAGA+AGG	-	chr3_3:90892667-90892686	None:intergenic	30.0%
!	TCTCGATCCTTTTTGATAAA+CGG	+	chr3_3:90892812-90892831	Msa0483110:intron	30.0%
!!!	GATCTCTACTGTTTTTTTGT+TGG	+	chr3_3:90893021-90893040	Msa0483110:intron	30.0%
!	TGTTATGTTTTGTAGAGACA+AGG	+	chr3_3:90893062-90893081	Msa0483110:intron	30.0%
	ATAATCTTCTTAGTTAGCAG+AGG	-	chr3_3:90893106-90893125	None:intergenic	30.0%
	ACTTTGACACAATAAATCAC+TGG	-	chr3_3:90893235-90893254	None:intergenic	30.0%
	CATATGTAGAAATGCTTCTT+AGG	+	chr3_3:90893327-90893346	Msa0483110:intron	30.0%
!!!	TTTGATTTCTGTTTTTGGAG+AGG	+	chr3_3:90893355-90893374	Msa0483110:intron	30.0%
!	AGTTTTTCTTGTAGTGAAGT+GGG	+	chr3_3:90893471-90893490	Msa0483110:intron	30.0%
!	TAGAACCCAATGCATTTTAA+CGG	-	chr3_3:90893565-90893584	None:intergenic	30.0%
	ATCTCACCATTAAAATGCAT+TGG	-	chr3_3:90893614-90893633	None:intergenic	30.0%
	AAATTGTGAAGAAACTTGAG+AGG	-	chr3_3:90893649-90893668	None:intergenic	30.0%
	CTCAAGTTTCTTCACAATTT+AGG	+	chr3_3:90893649-90893668	Msa0483110:intron	30.0%
	CAAGTTTCTTCACAATTTAG+GGG	+	chr3_3:90893651-90893670	Msa0483110:intron	30.0%
!!!	CATGCTTTTTAAGTGTTGTT+AGG	+	chr3_3:90893818-90893837	Msa0483110:intron	30.0%
	GACACAATACACTTTAAATC+TGG	-	chr3_3:90893945-90893964	None:intergenic	30.0%
	GCAATAGAAAAATTGGTAGA+AGG	-	chr3_3:90893983-90894002	None:intergenic	30.0%
	TGTATATACAGAACAGCAAA+TGG	-	chr3_3:90894076-90894095	None:intergenic	30.0%
!!	ATTTGCTGTTCTGTATATAC+AGG	+	chr3_3:90894075-90894094	Msa0483110:intron	30.0%
!	TGTTTTGCATATTGAATCCT+CGG	+	chr3_3:90894105-90894124	Msa0483110:intron	30.0%
	ACAAACTTCTTGAAACCATT+AGG	-	chr3_3:90894285-90894304	None:intergenic	30.0%
!	TTTTGTGCTGTGTTATAATG+CGG	+	chr3_3:90894796-90894815	Msa0483110:three_prime_UTR	30.0%
	GTAGTGAATATGAATTGGGT+CGG	-	chr3_3:90892621-90892640	None:intergenic	35.0%
!	AAGGCACTAATAGAGAACTA+GGG	-	chr3_3:90892648-90892667	None:intergenic	35.0%
	AGAGACAAGGTAAGATAAGA+TGG	+	chr3_3:90893075-90893094	Msa0483110:intron	35.0%
!!!	CATATTTTCCTGTCACTTTG+AGG	-	chr3_3:90893157-90893176	None:intergenic	35.0%
	TGACAGGAAAATATGTGTCA+AGG	+	chr3_3:90893162-90893181	Msa0483110:CDS	35.0%
!!!	ATTTCTGTTTTTGGAGAGGA+TGG	+	chr3_3:90893359-90893378	Msa0483110:intron	35.0%
!!!	ATTTTTTACAAGTGGAAGGG+AGG	+	chr3_3:90893412-90893431	Msa0483110:intron	35.0%
!	CAGTTTTTCTTGTAGTGAAG+TGG	+	chr3_3:90893470-90893489	Msa0483110:intron	35.0%
	ATCTCACCGTTAAAATGCAT+TGG	+	chr3_3:90893556-90893575	Msa0483110:intron	35.0%
	TCTCACCGTTAAAATGCATT+GGG	+	chr3_3:90893557-90893576	Msa0483110:intron	35.0%
	TGAAGAAACTTGAGAGGTTT+AGG	-	chr3_3:90893643-90893662	None:intergenic	35.0%
	AAAAGGTAACAGGTATCAGT+AGG	-	chr3_3:90894037-90894056	None:intergenic	35.0%
!	GTTTTGCATATTGAATCCTC+GGG	+	chr3_3:90894106-90894125	Msa0483110:intron	35.0%
	GTTAAAATATTAGACACCCG+AGG	-	chr3_3:90894125-90894144	None:intergenic	35.0%
!	GTTACTTTGATGCCAAACAT+TGG	+	chr3_3:90894225-90894244	Msa0483110:CDS	35.0%
	TTGATGCCAAACATTGGATA+TGG	+	chr3_3:90894231-90894250	Msa0483110:CDS	35.0%
	TCATCAAAAGTTCCAAATCC+TGG	-	chr3_3:90894320-90894339	None:intergenic	35.0%
!!!	AACTTTTGATGATGCACAAC+AGG	+	chr3_3:90894328-90894347	Msa0483110:CDS	35.0%
	AAACAATCAAATATCGGAGC+AGG	-	chr3_3:90894777-90894796	None:intergenic	35.0%
	GTGTTATAATGCGGTTTCTT+TGG	+	chr3_3:90894805-90894824	Msa0483110:three_prime_UTR	35.0%
	GTAGTGAATATGAATTGGGT+CGG	-	chr3_3:90892621-90892640	None:intergenic	35.0%
!	AAGGCACTAATAGAGAACTA+GGG	-	chr3_3:90892648-90892667	None:intergenic	35.0%
	AGAGACAAGGTAAGATAAGA+TGG	+	chr3_3:90893075-90893094	Msa0483110:intron	35.0%
!!!	CATATTTTCCTGTCACTTTG+AGG	-	chr3_3:90893157-90893176	None:intergenic	35.0%
	TGACAGGAAAATATGTGTCA+AGG	+	chr3_3:90893162-90893181	Msa0483110:CDS	35.0%
!!!	ATTTCTGTTTTTGGAGAGGA+TGG	+	chr3_3:90893359-90893378	Msa0483110:intron	35.0%
!!!	ATTTTTTACAAGTGGAAGGG+AGG	+	chr3_3:90893412-90893431	Msa0483110:intron	35.0%
!	CAGTTTTTCTTGTAGTGAAG+TGG	+	chr3_3:90893470-90893489	Msa0483110:intron	35.0%
	ATCTCACCGTTAAAATGCAT+TGG	+	chr3_3:90893556-90893575	Msa0483110:intron	35.0%
	TCTCACCGTTAAAATGCATT+GGG	+	chr3_3:90893557-90893576	Msa0483110:intron	35.0%
	TGAAGAAACTTGAGAGGTTT+AGG	-	chr3_3:90893643-90893662	None:intergenic	35.0%
	AAAAGGTAACAGGTATCAGT+AGG	-	chr3_3:90894037-90894056	None:intergenic	35.0%
!	GTTTTGCATATTGAATCCTC+GGG	+	chr3_3:90894106-90894125	Msa0483110:intron	35.0%
	GTTAAAATATTAGACACCCG+AGG	-	chr3_3:90894125-90894144	None:intergenic	35.0%
!	GTTACTTTGATGCCAAACAT+TGG	+	chr3_3:90894225-90894244	Msa0483110:CDS	35.0%
	TTGATGCCAAACATTGGATA+TGG	+	chr3_3:90894231-90894250	Msa0483110:CDS	35.0%
	TCATCAAAAGTTCCAAATCC+TGG	-	chr3_3:90894320-90894339	None:intergenic	35.0%
!!!	AACTTTTGATGATGCACAAC+AGG	+	chr3_3:90894328-90894347	Msa0483110:CDS	35.0%
	AAACAATCAAATATCGGAGC+AGG	-	chr3_3:90894777-90894796	None:intergenic	35.0%
	GTGTTATAATGCGGTTTCTT+TGG	+	chr3_3:90894805-90894824	Msa0483110:three_prime_UTR	35.0%
	TTGGGTCGGTATTTCGTTAT+GGG	-	chr3_3:90892607-90892626	None:intergenic	40.0%
	ATTGGGTCGGTATTTCGTTA+TGG	-	chr3_3:90892608-90892627	None:intergenic	40.0%
!!	GAAGGCACTAATAGAGAACT+AGG	-	chr3_3:90892649-90892668	None:intergenic	40.0%
!	TTATCAAGAAGCGTGTCAAG+AGG	+	chr3_3:90893122-90893141	Msa0483110:CDS	40.0%
!	TCGGGTCCAATGCATTTTAA+TGG	+	chr3_3:90893605-90893624	Msa0483110:intron	40.0%
	ATTGGTAGAAGGACAAGACA+GGG	-	chr3_3:90893972-90893991	None:intergenic	40.0%
	AATTGGTAGAAGGACAAGAC+AGG	-	chr3_3:90893973-90893992	None:intergenic	40.0%
	ATCAGTAGGAACATCAGAGA+AGG	-	chr3_3:90894023-90894042	None:intergenic	40.0%
	TTTGAACTTACGCCTAACAC+GGG	-	chr3_3:90894202-90894221	None:intergenic	40.0%
	CTTTGAACTTACGCCTAACA+CGG	-	chr3_3:90894203-90894222	None:intergenic	40.0%
	TCTGAGCCATATCCAATGTT+TGG	-	chr3_3:90894240-90894259	None:intergenic	40.0%
	TGAAACCATTAGGCAGATAG+TGG	-	chr3_3:90894275-90894294	None:intergenic	40.0%
	AGTCAGAATTGCAGCTACTA+CGG	-	chr3_3:90894399-90894418	None:intergenic	40.0%
	TGTGTCAACCAGGAAAAGAA+AGG	+	chr3_3:90894466-90894485	Msa0483110:CDS	40.0%
!	AACGATCTCCTTTCTTTTCC+TGG	-	chr3_3:90894477-90894496	None:intergenic	40.0%
!	TGCTGTTTATGGGATGAACA+TGG	+	chr3_3:90894601-90894620	Msa0483110:three_prime_UTR	40.0%
	GGATTACTGTGTTTGAATCC+TGG	+	chr3_3:90894655-90894674	Msa0483110:three_prime_UTR	40.0%
	CAGTCAACACAAAAATCTCC+AGG	-	chr3_3:90894676-90894695	None:intergenic	40.0%
	TTGGGTCGGTATTTCGTTAT+GGG	-	chr3_3:90892607-90892626	None:intergenic	40.0%
	ATTGGGTCGGTATTTCGTTA+TGG	-	chr3_3:90892608-90892627	None:intergenic	40.0%
!!	GAAGGCACTAATAGAGAACT+AGG	-	chr3_3:90892649-90892668	None:intergenic	40.0%
!	TTATCAAGAAGCGTGTCAAG+AGG	+	chr3_3:90893122-90893141	Msa0483110:CDS	40.0%
!	TCGGGTCCAATGCATTTTAA+TGG	+	chr3_3:90893605-90893624	Msa0483110:intron	40.0%
	ATTGGTAGAAGGACAAGACA+GGG	-	chr3_3:90893972-90893991	None:intergenic	40.0%
	AATTGGTAGAAGGACAAGAC+AGG	-	chr3_3:90893973-90893992	None:intergenic	40.0%
	ATCAGTAGGAACATCAGAGA+AGG	-	chr3_3:90894023-90894042	None:intergenic	40.0%
	TTTGAACTTACGCCTAACAC+GGG	-	chr3_3:90894202-90894221	None:intergenic	40.0%
	CTTTGAACTTACGCCTAACA+CGG	-	chr3_3:90894203-90894222	None:intergenic	40.0%
	TCTGAGCCATATCCAATGTT+TGG	-	chr3_3:90894240-90894259	None:intergenic	40.0%
	TGAAACCATTAGGCAGATAG+TGG	-	chr3_3:90894275-90894294	None:intergenic	40.0%
	AGTCAGAATTGCAGCTACTA+CGG	-	chr3_3:90894399-90894418	None:intergenic	40.0%
	TGTGTCAACCAGGAAAAGAA+AGG	+	chr3_3:90894466-90894485	Msa0483110:CDS	40.0%
!	AACGATCTCCTTTCTTTTCC+TGG	-	chr3_3:90894477-90894496	None:intergenic	40.0%
!	TGCTGTTTATGGGATGAACA+TGG	+	chr3_3:90894601-90894620	Msa0483110:three_prime_UTR	40.0%
	GGATTACTGTGTTTGAATCC+TGG	+	chr3_3:90894655-90894674	Msa0483110:three_prime_UTR	40.0%
	CAGTCAACACAAAAATCTCC+AGG	-	chr3_3:90894676-90894695	None:intergenic	40.0%
	CAATGTTAACGAACGGTAGC+AGG	-	chr3_3:90892723-90892742	None:intergenic	45.0%
	TAAAGGCTTCAGAGACGCAA+AGG	-	chr3_3:90892763-90892782	None:intergenic	45.0%
	ACAAGTGGAAGGGAGGAAAA+AGG	+	chr3_3:90893419-90893438	Msa0483110:intron	45.0%
	TATGGTTCAACAAAGGGGAG+GGG	-	chr3_3:90893879-90893898	None:intergenic	45.0%
	GTATGGTTCAACAAAGGGGA+GGG	-	chr3_3:90893880-90893899	None:intergenic	45.0%
	TGTATGGTTCAACAAAGGGG+AGG	-	chr3_3:90893881-90893900	None:intergenic	45.0%
	TCCCCTTTGTTGAACCATAC+AGG	+	chr3_3:90893880-90893899	Msa0483110:intron	45.0%
	GCCTGTATGGTTCAACAAAG+GGG	-	chr3_3:90893884-90893903	None:intergenic	45.0%
	GGCCTGTATGGTTCAACAAA+GGG	-	chr3_3:90893885-90893904	None:intergenic	45.0%
	CATTAGTATGAGGGCCTGTA+TGG	-	chr3_3:90893897-90893916	None:intergenic	45.0%
	GTTATGGTATGCAGCAAAGC+TGG	+	chr3_3:90894154-90894173	Msa0483110:intron	45.0%
	ACACGGGAATCAATACCCTT+TGG	-	chr3_3:90894186-90894205	None:intergenic	45.0%
!!	AGGGTATTGATTCCCGTGTT+AGG	+	chr3_3:90894187-90894206	Msa0483110:CDS	45.0%
	CGTGTTAGGCGTAAGTTCAA+AGG	+	chr3_3:90894201-90894220	Msa0483110:CDS	45.0%
!	AACCATTAGGCAGATAGTGG+CGG	-	chr3_3:90894272-90894291	None:intergenic	45.0%
!!	GTTTGTTGTGCACAATGTCC+AGG	+	chr3_3:90894299-90894318	Msa0483110:CDS	45.0%
	TGTGCACAATGTCCAGGATT+TGG	+	chr3_3:90894305-90894324	Msa0483110:CDS	45.0%
	GATGATGCACAACAGGTAAC+TGG	+	chr3_3:90894335-90894354	Msa0483110:intron	45.0%
	GTCAGAATTGCAGCTACTAC+GGG	-	chr3_3:90894398-90894417	None:intergenic	45.0%
	CAATGTTAACGAACGGTAGC+AGG	-	chr3_3:90892723-90892742	None:intergenic	45.0%
	TAAAGGCTTCAGAGACGCAA+AGG	-	chr3_3:90892763-90892782	None:intergenic	45.0%
	ACAAGTGGAAGGGAGGAAAA+AGG	+	chr3_3:90893419-90893438	Msa0483110:intron	45.0%
	TATGGTTCAACAAAGGGGAG+GGG	-	chr3_3:90893879-90893898	None:intergenic	45.0%
	GTATGGTTCAACAAAGGGGA+GGG	-	chr3_3:90893880-90893899	None:intergenic	45.0%
	TGTATGGTTCAACAAAGGGG+AGG	-	chr3_3:90893881-90893900	None:intergenic	45.0%
	TCCCCTTTGTTGAACCATAC+AGG	+	chr3_3:90893880-90893899	Msa0483110:intron	45.0%
	GCCTGTATGGTTCAACAAAG+GGG	-	chr3_3:90893884-90893903	None:intergenic	45.0%
	GGCCTGTATGGTTCAACAAA+GGG	-	chr3_3:90893885-90893904	None:intergenic	45.0%
	CATTAGTATGAGGGCCTGTA+TGG	-	chr3_3:90893897-90893916	None:intergenic	45.0%
	GTTATGGTATGCAGCAAAGC+TGG	+	chr3_3:90894154-90894173	Msa0483110:intron	45.0%
	ACACGGGAATCAATACCCTT+TGG	-	chr3_3:90894186-90894205	None:intergenic	45.0%
!!	AGGGTATTGATTCCCGTGTT+AGG	+	chr3_3:90894187-90894206	Msa0483110:CDS	45.0%
	CGTGTTAGGCGTAAGTTCAA+AGG	+	chr3_3:90894201-90894220	Msa0483110:CDS	45.0%
!	AACCATTAGGCAGATAGTGG+CGG	-	chr3_3:90894272-90894291	None:intergenic	45.0%
!!	GTTTGTTGTGCACAATGTCC+AGG	+	chr3_3:90894299-90894318	Msa0483110:CDS	45.0%
	TGTGCACAATGTCCAGGATT+TGG	+	chr3_3:90894305-90894324	Msa0483110:CDS	45.0%
	GATGATGCACAACAGGTAAC+TGG	+	chr3_3:90894335-90894354	Msa0483110:intron	45.0%
	GTCAGAATTGCAGCTACTAC+GGG	-	chr3_3:90894398-90894417	None:intergenic	45.0%
	GCACAAGAAGAAAGGAGGGT+GGG	+	chr3_3:90892528-90892547	Msa0483110:five_prime_UTR	50.0%
	AGCGTGTCAAGAGGTTCATC+AGG	+	chr3_3:90893131-90893150	Msa0483110:CDS	50.0%
	TCATCAGGCCTCAAAGTGAC+AGG	+	chr3_3:90893146-90893165	Msa0483110:CDS	50.0%
	TGGAAGGGAGGAAAAAGGAG+TGG	+	chr3_3:90893424-90893443	Msa0483110:intron	50.0%
	GGGCCTGTATGGTTCAACAA+AGG	-	chr3_3:90893886-90893905	None:intergenic	50.0%
!	ACCATTAGGCAGATAGTGGC+GGG	-	chr3_3:90894271-90894290	None:intergenic	50.0%
	TCGCACACAATGTGTCAACC+AGG	+	chr3_3:90894456-90894475	Msa0483110:CDS	50.0%
	CGTTGAACGTGCAGCTCAAT+TGG	+	chr3_3:90894493-90894512	Msa0483110:CDS	50.0%
	GCACAAGAAGAAAGGAGGGT+GGG	+	chr3_3:90892528-90892547	Msa0483110:five_prime_UTR	50.0%
	AGCGTGTCAAGAGGTTCATC+AGG	+	chr3_3:90893131-90893150	Msa0483110:CDS	50.0%
	TCATCAGGCCTCAAAGTGAC+AGG	+	chr3_3:90893146-90893165	Msa0483110:CDS	50.0%
	TGGAAGGGAGGAAAAAGGAG+TGG	+	chr3_3:90893424-90893443	Msa0483110:intron	50.0%
	GGGCCTGTATGGTTCAACAA+AGG	-	chr3_3:90893886-90893905	None:intergenic	50.0%
!	ACCATTAGGCAGATAGTGGC+GGG	-	chr3_3:90894271-90894290	None:intergenic	50.0%
	TCGCACACAATGTGTCAACC+AGG	+	chr3_3:90894456-90894475	Msa0483110:CDS	50.0%
	CGTTGAACGTGCAGCTCAAT+TGG	+	chr3_3:90894493-90894512	Msa0483110:CDS	50.0%
	AAACTGCGCGCTGTTCAACC+AGG	+	chr3_3:90892694-90892713	Msa0483110:five_prime_UTR	55.0%
	ACGAACGGTAGCAGGATACC+TGG	-	chr3_3:90892715-90892734	None:intergenic	55.0%
	TTCAACAAAGGGGAGGGGAG+GGG	-	chr3_3:90893874-90893893	None:intergenic	55.0%
	GTTCAACAAAGGGGAGGGGA+GGG	-	chr3_3:90893875-90893894	None:intergenic	55.0%
	GTATGCAGCAAAGCTGGCGT+AGG	+	chr3_3:90894160-90894179	Msa0483110:intron	55.0%
	CAAAGCTGGCGTAGGCCAAA+GGG	+	chr3_3:90894168-90894187	Msa0483110:CDS	55.0%
	ACCCGCCACTATCTGCCTAA+TGG	+	chr3_3:90894267-90894286	Msa0483110:CDS	55.0%
	TTGTCACCAACAAGCTCGCC+AGG	+	chr3_3:90894522-90894541	Msa0483110:CDS	55.0%
	GTCTTCTTGACTGCGCAACC+TGG	-	chr3_3:90894543-90894562	None:intergenic	55.0%
	AAACTGCGCGCTGTTCAACC+AGG	+	chr3_3:90892694-90892713	Msa0483110:five_prime_UTR	55.0%
	ACGAACGGTAGCAGGATACC+TGG	-	chr3_3:90892715-90892734	None:intergenic	55.0%
	TTCAACAAAGGGGAGGGGAG+GGG	-	chr3_3:90893874-90893893	None:intergenic	55.0%
	GTTCAACAAAGGGGAGGGGA+GGG	-	chr3_3:90893875-90893894	None:intergenic	55.0%
	GTATGCAGCAAAGCTGGCGT+AGG	+	chr3_3:90894160-90894179	Msa0483110:intron	55.0%
	CAAAGCTGGCGTAGGCCAAA+GGG	+	chr3_3:90894168-90894187	Msa0483110:CDS	55.0%
	ACCCGCCACTATCTGCCTAA+TGG	+	chr3_3:90894267-90894286	Msa0483110:CDS	55.0%
	TTGTCACCAACAAGCTCGCC+AGG	+	chr3_3:90894522-90894541	Msa0483110:CDS	55.0%
	GTCTTCTTGACTGCGCAACC+TGG	-	chr3_3:90894543-90894562	None:intergenic	55.0%
	GGTTCAACAAAGGGGAGGGG+AGG	-	chr3_3:90893876-90893895	None:intergenic	60.0%
	GCAAAGCTGGCGTAGGCCAA+AGG	+	chr3_3:90894167-90894186	Msa0483110:intron	60.0%
	GGTTCAACAAAGGGGAGGGG+AGG	-	chr3_3:90893876-90893895	None:intergenic	60.0%
	GCAAAGCTGGCGTAGGCCAA+AGG	+	chr3_3:90894167-90894186	Msa0483110:intron	60.0%
	GCGCAACCTGGCGAGCTTGT+TGG	-	chr3_3:90894531-90894550	None:intergenic	65.0%
	GCGCAACCTGGCGAGCTTGT+TGG	-	chr3_3:90894531-90894550	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_3	gene	90892528	90894833	90892528	ID=Msa0483110;Name=Msa0483110
chr3_3	mRNA	90892528	90894833	90892528	ID=Msa0483110-mRNA-1;Parent=Msa0483110;Name=Msa0483110-mRNA-1;_AED=0.02;_eAED=0.02;_QI=205\|1\|1\|1\|0.66\|0.5\|4\|265\|133
chr3_3	exon	90892528	90892715	90892528	ID=Msa0483110-mRNA-1:exon:26540;Parent=Msa0483110-mRNA-1
chr3_3	exon	90893077	90893183	90893077	ID=Msa0483110-mRNA-1:exon:26541;Parent=Msa0483110-mRNA-1
chr3_3	exon	90894168	90894349	90894168	ID=Msa0483110-mRNA-1:exon:26542;Parent=Msa0483110-mRNA-1
chr3_3	exon	90894439	90894833	90894439	ID=Msa0483110-mRNA-1:exon:26543;Parent=Msa0483110-mRNA-1
chr3_3	five_prime_UTR	90892528	90892715	90892528	ID=Msa0483110-mRNA-1:five_prime_utr;Parent=Msa0483110-mRNA-1
chr3_3	five_prime_UTR	90893077	90893093	90893077	ID=Msa0483110-mRNA-1:five_prime_utr;Parent=Msa0483110-mRNA-1
chr3_3	CDS	90893094	90893183	90893094	ID=Msa0483110-mRNA-1:cds;Parent=Msa0483110-mRNA-1
chr3_3	CDS	90894168	90894349	90894168	ID=Msa0483110-mRNA-1:cds;Parent=Msa0483110-mRNA-1
chr3_3	CDS	90894439	90894568	90894439	ID=Msa0483110-mRNA-1:cds;Parent=Msa0483110-mRNA-1
chr3_3	three_prime_UTR	90894569	90894833	90894569	ID=Msa0483110-mRNA-1:three_prime_utr;Parent=Msa0483110-mRNA-1

Gene Sequence

>Msa0483110

ATGGCTGTTCCTCTGCTAACTAAGAAGATTATCAAGAAGCGTGTCAAGAGGTTCATCAGGCCTCAAAGTGACAGGAAAATATGTGTCAAGCAAAGCTGGCGTAGGCCAAAGGGTATTGATTCCCGTGTTAGGCGTAAGTTCAAAGGAGTTACTTTGATGCCAAACATTGGATATGGCTCAGACAAGAAGACCCGCCACTATCTGCCTAATGGTTTCAAGAAGTTTGTTGTGCACAATGTCCAGGATTTGGAACTTTTGATGATGCACAACAGGACATACTGTGCTGAGATCGCACACAATGTGTCAACCAGGAAAAGAAAGGAGATCGTTGAACGTGCAGCTCAATTGGATGTTGTTGTCACCAACAAGCTCGCCAGGTTGCGCAGTCAAGAAGACGAGTGA

Protein sequence

>Msa0483110

MAVPLLTKKIIKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVQDLELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE*