Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289580 | XP_013469779.1 | 97.701 | 261 | 6 | 0 | 1 | 261 | 1 | 261 | 0.0 | 530 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289580 | sp|Q8GTE3|RS3A_CICAR | 92.720 | 261 | 19 | 0 | 1 | 261 | 1 | 261 | 4.49e-175 | 485 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289580 | B7FLW8 | 97.701 | 261 | 6 | 0 | 1 | 261 | 1 | 261 | 0.0 | 530 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000100 | Msa0289580 | 0.804997 | 1.651108e-49 | -8.615850e-47 |
Msa0002750 | Msa0289580 | 0.909482 | 5.427544e-82 | -8.615850e-47 |
Msa0002790 | Msa0289580 | 0.909764 | 3.970644e-82 | -8.615850e-47 |
Msa0003720 | Msa0289580 | 0.801469 | 8.873619e-49 | -8.615850e-47 |
Msa0003780 | Msa0289580 | 0.865748 | 4.714381e-65 | -8.615850e-47 |
Msa0022970 | Msa0289580 | 0.877694 | 5.116056e-69 | -8.615850e-47 |
Msa0024710 | Msa0289580 | 0.808375 | 3.194588e-50 | -8.615850e-47 |
Msa0027260 | Msa0289580 | 0.849996 | 2.258395e-60 | -8.615850e-47 |
Msa0032780 | Msa0289580 | 0.807060 | 6.078189e-50 | -8.615850e-47 |
Msa0032810 | Msa0289580 | 0.833865 | 4.171654e-56 | -8.615850e-47 |
Msa0040690 | Msa0289580 | 0.876955 | 9.250233e-69 | -8.615850e-47 |
Msa0042280 | Msa0289580 | 0.843380 | 1.451845e-58 | -8.615850e-47 |
Msa0043660 | Msa0289580 | 0.831579 | 1.541132e-55 | -8.615850e-47 |
Msa0045730 | Msa0289580 | 0.870659 | 1.234852e-66 | -8.615850e-47 |
Msa0046830 | Msa0289580 | 0.809958 | 1.462776e-50 | -8.615850e-47 |
Msa0047160 | Msa0289580 | 0.854149 | 1.491385e-61 | -8.615850e-47 |
Msa0048180 | Msa0289580 | 0.859612 | 3.666491e-63 | -8.615850e-47 |
Msa0049370 | Msa0289580 | 0.826425 | 2.731558e-54 | -8.615850e-47 |
Msa0074030 | Msa0289580 | 0.854533 | 1.155610e-61 | -8.615850e-47 |
Msa0079820 | Msa0289580 | 0.805236 | 1.471478e-49 | -8.615850e-47 |
Msa0086750 | Msa0289580 | 0.874981 | 4.413193e-68 | -8.615850e-47 |
Msa0091880 | Msa0289580 | 0.816519 | 5.303606e-52 | -8.615850e-47 |
Msa0094470 | Msa0289580 | 0.847256 | 1.297648e-59 | -8.615850e-47 |
Msa0097580 | Msa0289580 | 0.800929 | 1.144376e-48 | -8.615850e-47 |
Msa0097600 | Msa0289580 | 0.812845 | 3.454200e-51 | -8.615850e-47 |
Msa0100730 | Msa0289580 | 0.807680 | 4.491492e-50 | -8.615850e-47 |
Msa0100740 | Msa0289580 | 0.805617 | 1.224513e-49 | -8.615850e-47 |
Msa0105370 | Msa0289580 | 0.838760 | 2.374344e-57 | -8.615850e-47 |
Msa0115130 | Msa0289580 | 0.807277 | 5.467855e-50 | -8.615850e-47 |
Msa0116130 | Msa0289580 | 0.845812 | 3.214820e-59 | -8.615850e-47 |
Msa0116670 | Msa0289580 | 0.859204 | 4.861857e-63 | -8.615850e-47 |
Msa0118710 | Msa0289580 | 0.902492 | 9.177277e-79 | -8.615850e-47 |
Msa0127310 | Msa0289580 | 0.803654 | 3.144591e-49 | -8.615850e-47 |
Msa0128860 | Msa0289580 | 0.870287 | 1.635536e-66 | -8.615850e-47 |
Msa0129660 | Msa0289580 | 0.805877 | 1.079659e-49 | -8.615850e-47 |
Msa0133540 | Msa0289580 | 0.890338 | 1.078535e-73 | -8.615850e-47 |
Msa0137550 | Msa0289580 | 0.825565 | 4.374610e-54 | -8.615850e-47 |
Msa0146340 | Msa0289580 | 0.878150 | 3.543871e-69 | -8.615850e-47 |
Msa0163760 | Msa0289580 | 0.862741 | 4.089321e-64 | -8.615850e-47 |
Msa0167480 | Msa0289580 | 0.834395 | 3.072186e-56 | -8.615850e-47 |
Msa0173530 | Msa0289580 | 0.858997 | 5.606444e-63 | -8.615850e-47 |
Msa0174730 | Msa0289580 | 0.869100 | 3.988331e-66 | -8.615850e-47 |
Msa0180020 | Msa0289580 | 0.808914 | 2.450052e-50 | -8.615850e-47 |
Msa0181490 | Msa0289580 | 0.869287 | 3.466221e-66 | -8.615850e-47 |
Msa0187930 | Msa0289580 | 0.868407 | 6.683462e-66 | -8.615850e-47 |
Msa0188350 | Msa0289580 | 0.825627 | 4.229300e-54 | -8.615850e-47 |
Msa0189300 | Msa0289580 | 0.836009 | 1.202952e-56 | -8.615850e-47 |
Msa0189700 | Msa0289580 | 0.866365 | 3.006745e-65 | -8.615850e-47 |
Msa0192230 | Msa0289580 | 0.801906 | 7.217024e-49 | -8.615850e-47 |
Msa0194540 | Msa0289580 | 0.859546 | 3.839190e-63 | -8.615850e-47 |
Msa0202020 | Msa0289580 | 0.819566 | 1.085646e-52 | -8.615850e-47 |
Msa0210330 | Msa0289580 | 0.819246 | 1.284397e-52 | -8.615850e-47 |
Msa0210360 | Msa0289580 | 0.826598 | 2.484710e-54 | -8.615850e-47 |
Msa0218830 | Msa0289580 | 0.848140 | 7.410462e-60 | -8.615850e-47 |
Msa0219120 | Msa0289580 | 0.854667 | 1.056313e-61 | -8.615850e-47 |
Msa0221030 | Msa0289580 | 0.829749 | 4.324523e-55 | -8.615850e-47 |
Msa0230490 | Msa0289580 | 0.863441 | 2.484303e-64 | -8.615850e-47 |
Msa0231100 | Msa0289580 | 0.862081 | 6.524517e-64 | -8.615850e-47 |
Msa0231660 | Msa0289580 | 0.836464 | 9.218716e-57 | -8.615850e-47 |
Msa0232010 | Msa0289580 | 0.863198 | 2.954432e-64 | -8.615850e-47 |
Msa0232080 | Msa0289580 | 0.867137 | 1.707498e-65 | -8.615850e-47 |
Msa0243140 | Msa0289580 | 0.808649 | 2.791312e-50 | -8.615850e-47 |
Msa0244780 | Msa0289580 | 0.877437 | 6.289967e-69 | -8.615850e-47 |
Msa0250820 | Msa0289580 | 0.876209 | 1.674977e-68 | -8.615850e-47 |
Msa0250870 | Msa0289580 | 0.837263 | 5.762636e-57 | -8.615850e-47 |
Msa0258390 | Msa0289580 | 0.836442 | 9.336370e-57 | -8.615850e-47 |
Msa0258850 | Msa0289580 | 0.872253 | 3.664681e-67 | -8.615850e-47 |
Msa0262310 | Msa0289580 | 0.806278 | 8.888486e-50 | -8.615850e-47 |
Msa0262480 | Msa0289580 | 0.838601 | 2.610826e-57 | -8.615850e-47 |
Msa0264010 | Msa0289580 | 0.864511 | 1.153378e-64 | -8.615850e-47 |
Msa0268130 | Msa0289580 | 0.860020 | 2.763783e-63 | -8.615850e-47 |
Msa0269180 | Msa0289580 | 0.837048 | 6.541756e-57 | -8.615850e-47 |
Msa0283390 | Msa0289580 | 0.860613 | 1.827677e-63 | -8.615850e-47 |
Msa0289580 | Msa0289610 | 0.998091 | 6.286312e-256 | -8.615850e-47 |
Msa0289580 | Msa0297610 | 0.830104 | 3.543042e-55 | -8.615850e-47 |
Msa0289580 | Msa0298140 | 0.813199 | 2.889018e-51 | -8.615850e-47 |
Msa0289580 | Msa0298200 | 0.868379 | 6.820931e-66 | -8.615850e-47 |
Msa0289580 | Msa0298990 | 0.869492 | 2.974041e-66 | -8.615850e-47 |
Msa0289580 | Msa0300350 | 0.842351 | 2.726438e-58 | -8.615850e-47 |
Msa0289580 | Msa0306690 | 0.875573 | 2.769688e-68 | -8.615850e-47 |
Msa0289580 | Msa0313100 | 0.825240 | 5.220664e-54 | -8.615850e-47 |
Msa0289580 | Msa0317910 | 0.832461 | 9.328315e-56 | -8.615850e-47 |
Msa0289580 | Msa0321640 | 0.870636 | 1.256557e-66 | -8.615850e-47 |
Msa0289580 | Msa0327300 | 0.964032 | 8.078710e-123 | -8.615850e-47 |
Msa0289580 | Msa0327330 | 0.940754 | 1.357553e-100 | -8.615850e-47 |
Msa0289580 | Msa0336010 | 0.884038 | 2.696661e-71 | -8.615850e-47 |
Msa0289580 | Msa0337650 | 0.820316 | 7.315681e-53 | -8.615850e-47 |
Msa0289580 | Msa0337670 | 0.817390 | 3.380550e-52 | -8.615850e-47 |
Msa0289580 | Msa0342850 | 0.830983 | 2.159008e-55 | -8.615850e-47 |
Msa0289580 | Msa0348830 | 0.870330 | 1.583106e-66 | -8.615850e-47 |
Msa0289580 | Msa0357900 | 0.844845 | 5.873789e-59 | -8.615850e-47 |
Msa0289580 | Msa0369450 | 0.810466 | 1.136934e-50 | -8.615850e-47 |
Msa0289580 | Msa0385580 | 0.807541 | 4.806195e-50 | -8.615850e-47 |
Msa0289580 | Msa0393280 | 0.841002 | 6.185795e-58 | -8.615850e-47 |
Msa0289580 | Msa0393370 | 0.867859 | 1.002905e-65 | -8.615850e-47 |
Msa0289580 | Msa0395890 | 0.801439 | 9.000529e-49 | -8.615850e-47 |
Msa0289580 | Msa0443390 | 0.863826 | 1.886112e-64 | -8.615850e-47 |
Msa0289580 | Msa0479430 | 0.809663 | 1.693295e-50 | -8.615850e-47 |
Msa0289580 | Msa0481850 | 0.815121 | 1.087547e-51 | -8.615850e-47 |
Msa0289580 | Msa0483110 | 0.881042 | 3.334152e-70 | -8.615850e-47 |
Msa0289580 | Msa0486070 | 0.804624 | 1.975608e-49 | -8.615850e-47 |
Msa0289580 | Msa0517050 | 0.809770 | 1.605391e-50 | -8.615850e-47 |
Msa0289580 | Msa0523120 | 0.801920 | 7.169635e-49 | -8.615850e-47 |
Msa0289580 | Msa0526540 | 0.891363 | 4.253539e-74 | -8.615850e-47 |
Msa0289580 | Msa0527150 | 0.839939 | 1.173735e-57 | -8.615850e-47 |
Msa0289580 | Msa0531650 | 0.860630 | 1.806907e-63 | -8.615850e-47 |
Msa0289580 | Msa0534750 | 0.834029 | 3.796055e-56 | -8.615850e-47 |
Msa0289580 | Msa0554290 | 0.807007 | 6.238020e-50 | -8.615850e-47 |
Msa0289580 | Msa0571920 | 0.873393 | 1.522414e-67 | -8.615850e-47 |
Msa0289580 | Msa0576940 | 0.890323 | 1.093355e-73 | -8.615850e-47 |
Msa0289580 | Msa0581110 | 0.820145 | 8.008226e-53 | -8.615850e-47 |
Msa0289580 | Msa0581280 | 0.832327 | 1.007113e-55 | -8.615850e-47 |
Msa0289580 | Msa0584260 | 0.834432 | 3.008171e-56 | -8.615850e-47 |
Msa0289580 | Msa0586420 | 0.801838 | 7.455120e-49 | -8.615850e-47 |
Msa0289580 | Msa0588360 | 0.857931 | 1.166118e-62 | -8.615850e-47 |
Msa0289580 | Msa0603320 | 0.849934 | 2.351424e-60 | -8.615850e-47 |
Msa0289580 | Msa0608320 | 0.803489 | 3.401423e-49 | -8.615850e-47 |
Msa0289580 | Msa0612390 | 0.800983 | 1.115588e-48 | -8.615850e-47 |
Msa0289580 | Msa0615440 | 0.859324 | 4.476194e-63 | -8.615850e-47 |
Msa0289580 | Msa0615580 | 0.842103 | 3.171700e-58 | -8.615850e-47 |
Msa0289580 | Msa0620890 | 0.812430 | 4.255889e-51 | -8.615850e-47 |
Msa0289580 | Msa0620990 | 0.800324 | 1.520032e-48 | -8.615850e-47 |
Msa0289580 | Msa0621950 | 0.832966 | 6.991438e-56 | -8.615850e-47 |
Msa0289580 | Msa0622750 | 0.864437 | 1.216729e-64 | -8.615850e-47 |
Msa0289580 | Msa0623200 | 0.871228 | 8.017916e-67 | -8.615850e-47 |
Msa0289580 | Msa0644350 | 0.800321 | 1.522727e-48 | -8.615850e-47 |
Msa0289580 | Msa0648780 | 0.809568 | 1.774729e-50 | -8.615850e-47 |
Msa0289580 | Msa0661300 | 0.805392 | 1.364774e-49 | -8.615850e-47 |
Msa0289580 | Msa0664560 | 0.832925 | 7.154611e-56 | -8.615850e-47 |
Msa0289580 | Msa0666230 | 0.848827 | 4.780795e-60 | -8.615850e-47 |
Msa0289580 | Msa0669520 | 0.809984 | 1.443722e-50 | -8.615850e-47 |
Msa0289580 | Msa0688850 | 0.854240 | 1.404047e-61 | -8.615850e-47 |
Msa0289580 | Msa0689260 | 0.805124 | 1.552965e-49 | -8.615850e-47 |
Msa0289580 | Msa0698490 | 0.857394 | 1.681625e-62 | -8.615850e-47 |
Msa0289580 | Msa0698660 | 0.855820 | 4.881015e-62 | -8.615850e-47 |
Msa0289580 | Msa0698780 | 0.844010 | 9.850457e-59 | -8.615850e-47 |
Msa0289580 | Msa0709730 | 0.802080 | 6.648182e-49 | -8.615850e-47 |
Msa0289580 | Msa0712610 | 0.816211 | 6.215136e-52 | -8.615850e-47 |
Msa0289580 | Msa0719420 | 0.816089 | 6.617734e-52 | -8.615850e-47 |
Msa0289580 | Msa0729200 | 0.865378 | 6.168166e-65 | -8.615850e-47 |
Msa0289580 | Msa0738100 | 0.883547 | 4.091869e-71 | -8.615850e-47 |
Msa0289580 | Msa0753140 | 0.820993 | 5.114081e-53 | -8.615850e-47 |
Msa0289580 | Msa0769590 | 0.872597 | 2.814102e-67 | -8.615850e-47 |
Msa0289580 | Msa0780490 | 0.854384 | 1.275838e-61 | -8.615850e-47 |
Msa0289580 | Msa0781080 | 0.802413 | 5.678060e-49 | -8.615850e-47 |
Msa0289580 | Msa0785130 | 0.871724 | 5.493443e-67 | -8.615850e-47 |
Msa0289580 | Msa0789680 | 0.816703 | 4.824451e-52 | -8.615850e-47 |
Msa0289580 | Msa0792760 | 0.830021 | 3.712388e-55 | -8.615850e-47 |
Msa0289580 | Msa0802410 | 0.815021 | 1.144424e-51 | -8.615850e-47 |
Msa0289580 | Msa0806880 | 0.889604 | 2.088256e-73 | -8.615850e-47 |
Msa0289580 | Msa0817540 | 0.883119 | 5.876721e-71 | -8.615850e-47 |
Msa0289580 | Msa0867060 | 0.817340 | 3.469990e-52 | -8.615850e-47 |
Msa0289580 | Msa0881290 | 0.866207 | 3.376112e-65 | -8.615850e-47 |
Msa0289580 | Msa0888810 | 0.826044 | 3.366867e-54 | -8.615850e-47 |
Msa0289580 | Msa0902760 | 0.820085 | 8.264559e-53 | -8.615850e-47 |
Msa0289580 | Msa0906780 | 0.813558 | 2.409238e-51 | -8.615850e-47 |
Msa0289580 | Msa0930490 | 0.806803 | 6.888278e-50 | -8.615850e-47 |
Msa0289580 | Msa0953310 | 0.850252 | 1.915063e-60 | -8.615850e-47 |
Msa0289580 | Msa0989540 | 0.835998 | 1.210857e-56 | -8.615850e-47 |
Msa0289580 | Msa1006840 | 0.875464 | 3.019672e-68 | -8.615850e-47 |
Msa0289580 | Msa1010310 | 0.847341 | 1.229387e-59 | -8.615850e-47 |
Msa0289580 | Msa1012740 | 0.889392 | 2.524037e-73 | -8.615850e-47 |
Msa0289580 | Msa1012770 | 0.802668 | 5.029070e-49 | -8.615850e-47 |
Msa0289580 | Msa1013400 | 0.813748 | 2.187131e-51 | -8.615850e-47 |
Msa0289580 | Msa1019240 | 0.886296 | 3.868816e-72 | -8.615850e-47 |
Msa0289580 | Msa1019260 | 0.880543 | 5.034114e-70 | -8.615850e-47 |
Msa0289580 | Msa1039520 | 0.833624 | 4.791045e-56 | -8.615850e-47 |
Msa0289580 | Msa1043690 | 0.872505 | 3.020245e-67 | -8.615850e-47 |
Msa0289580 | Msa1051880 | 0.817692 | 2.889802e-52 | -8.615850e-47 |
Msa0289580 | Msa1072710 | 0.879736 | 9.769642e-70 | -8.615850e-47 |
Msa0289580 | Msa1078870 | 0.830360 | 3.068595e-55 | -8.615850e-47 |
Msa0289580 | Msa1078980 | 0.811927 | 5.481402e-51 | -8.615850e-47 |
Msa0289580 | Msa1080290 | 0.806466 | 8.116524e-50 | -8.615850e-47 |
Msa0289580 | Msa1080350 | 0.832776 | 7.795115e-56 | -8.615850e-47 |
Msa0289580 | Msa1081150 | 0.815528 | 8.826221e-52 | -8.615850e-47 |
Msa0289580 | Msa1088490 | 0.910223 | 2.380758e-82 | -8.615850e-47 |
Msa0289580 | Msa1093530 | 0.816547 | 5.227985e-52 | -8.615850e-47 |
Msa0289580 | Msa1094380 | 0.818437 | 1.961481e-52 | -8.615850e-47 |
Msa0289580 | Msa1104140 | 0.895798 | 6.806606e-76 | -8.615850e-47 |
Msa0289580 | Msa1104210 | 0.877486 | 6.045118e-69 | -8.615850e-47 |
Msa0289580 | Msa1125860 | 0.837366 | 5.422297e-57 | -8.615850e-47 |
Msa0289580 | Msa1126060 | 0.832045 | 1.182454e-55 | -8.615850e-47 |
Msa0289580 | Msa1126510 | 0.823174 | 1.596245e-53 | -8.615850e-47 |
Msa0289580 | Msa1126830 | 0.822837 | 1.912780e-53 | -8.615850e-47 |
Msa0289580 | Msa1128120 | 0.819381 | 1.196496e-52 | -8.615850e-47 |
Msa0289580 | Msa1135890 | 0.872113 | 4.079208e-67 | -8.615850e-47 |
Msa0289580 | Msa1165780 | 0.823145 | 1.621899e-53 | -8.615850e-47 |
Msa0289580 | Msa1166860 | 0.829723 | 4.387329e-55 | -8.615850e-47 |
Msa0289580 | Msa1166870 | 0.851263 | 9.945542e-61 | -8.615850e-47 |
Msa0289580 | Msa1167540 | 0.813973 | 1.951383e-51 | -8.615850e-47 |
Msa0289580 | Msa1169180 | 0.803439 | 3.484196e-49 | -8.615850e-47 |
Msa0289580 | Msa1181830 | 0.827793 | 1.285522e-54 | -8.615850e-47 |
Msa0289580 | Msa1181850 | 0.807173 | 5.751435e-50 | -8.615850e-47 |
Msa0289580 | Msa1207270 | 0.801753 | 7.758509e-49 | -8.615850e-47 |
Msa0289580 | Msa1208020 | 0.812943 | 3.287808e-51 | -8.615850e-47 |
Msa0289580 | Msa1209200 | 0.830058 | 3.635627e-55 | -8.615850e-47 |
Msa0289580 | Msa1213480 | 0.812679 | 3.755241e-51 | -8.615850e-47 |
Msa0289580 | Msa1215820 | 0.906384 | 1.571462e-80 | -8.615850e-47 |
Msa0289580 | Msa1218600 | 0.812579 | 3.949171e-51 | -8.615850e-47 |
Msa0289580 | Msa1230580 | 0.818813 | 1.611669e-52 | -8.615850e-47 |
Msa0289580 | Msa1257510 | 0.837506 | 4.993653e-57 | -8.615850e-47 |
Msa0289580 | Msa1262890 | 0.858783 | 6.497301e-63 | -8.615850e-47 |
Msa0289580 | Msa1265630 | 0.856334 | 3.452006e-62 | -8.615850e-47 |
Msa0289580 | Msa1266060 | 0.814395 | 1.574647e-51 | -8.615850e-47 |
Msa0289580 | Msa1273340 | 0.800443 | 1.437948e-48 | -8.615850e-47 |
Msa0289580 | Msa1275680 | 0.821851 | 3.240633e-53 | -8.615850e-47 |
Msa0289580 | Msa1299590 | 0.852703 | 3.879680e-61 | -8.615850e-47 |
Msa0289580 | Msa1300380 | 0.808326 | 3.271934e-50 | -8.615850e-47 |
Msa0289580 | Msa1305050 | 0.848884 | 4.610734e-60 | -8.615850e-47 |
Msa0289580 | Msa1331710 | 0.817225 | 3.682264e-52 | -8.615850e-47 |
Msa0289580 | Msa1332250 | 0.835006 | 2.156777e-56 | -8.615850e-47 |
Msa0289580 | Msa1338190 | 0.842985 | 1.850699e-58 | -8.615850e-47 |
Msa0289580 | Msa1343260 | 0.867009 | 1.876533e-65 | -8.615850e-47 |
Msa0289580 | Msa1349570 | 0.857200 | 1.918859e-62 | -8.615850e-47 |
Msa0289580 | Msa1356790 | 0.832012 | 1.204691e-55 | -8.615850e-47 |
Msa0289580 | Msa1358250 | 0.807448 | 5.030102e-50 | -8.615850e-47 |
Msa0289580 | Msa1362790 | 0.861942 | 7.194616e-64 | -8.615850e-47 |
Msa0289580 | Msa1363330 | 0.894068 | 3.488841e-75 | -8.615850e-47 |
Msa0289580 | Msa1366180 | 0.915211 | 7.706786e-85 | -8.615850e-47 |
Msa0289580 | Msa1369190 | 0.825035 | 5.837668e-54 | -8.615850e-47 |
Msa0289580 | Msa1374120 | 0.869136 | 3.880956e-66 | -8.615850e-47 |
Msa0289580 | Msa1379760 | 0.872003 | 4.440515e-67 | -8.615850e-47 |
Msa0289580 | Msa1382620 | 0.831095 | 2.026448e-55 | -8.615850e-47 |
Msa0289580 | Msa1386600 | 0.894490 | 2.347727e-75 | -8.615850e-47 |
Msa0289580 | Msa1387410 | 0.884653 | 1.596128e-71 | -8.615850e-47 |
Msa0289580 | Msa1394290 | 0.856702 | 2.690008e-62 | -8.615850e-47 |
Msa0289580 | Msa1399530 | 0.877563 | 5.683664e-69 | -8.615850e-47 |
Msa0289580 | Msa1410440 | 0.812677 | 3.758525e-51 | -8.615850e-47 |
Msa0289580 | Msa1413500 | 0.891596 | 3.438332e-74 | -8.615850e-47 |
Msa0289580 | Msa1426120 | 0.839846 | 1.240892e-57 | -8.615850e-47 |
Msa0289580 | Msa1426370 | 0.831868 | 1.308112e-55 | -8.615850e-47 |
Msa0289580 | Msa1426490 | 0.861995 | 6.931087e-64 | -8.615850e-47 |
Msa0289580 | Msa1427560 | 0.862475 | 4.937181e-64 | -8.615850e-47 |
Msa0289580 | Msa1432700 | 0.845953 | 2.943832e-59 | -8.615850e-47 |
Msa0289580 | Msa1433310 | 0.840277 | 9.580312e-58 | -8.615850e-47 |
Msa0289580 | Msa1448690 | 0.871705 | 5.576158e-67 | -8.615850e-47 |
Msa0289580 | Msa1450280 | 0.834307 | 3.233716e-56 | -8.615850e-47 |
Msa0289580 | Msa1456050 | 0.829572 | 4.776877e-55 | -8.615850e-47 |
Msa0289580 | Msa1457920 | 0.821752 | 3.416395e-53 | -8.615850e-47 |
Msa0289580 | Msa1465260 | 0.832890 | 7.300471e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289580 | MtrunA17_Chr1g0204941 | 97.701 | 261 | 6 | 0 | 1 | 261 | 1 | 261 | 0.0 | 530 |
Msa0289580 | MtrunA17_Chr3g0081171 | 95.402 | 261 | 12 | 0 | 1 | 261 | 1 | 261 | 2.86e-180 | 495 |
Msa0289580 | MtrunA17_Chr5g0394611 | 94.636 | 261 | 14 | 0 | 1 | 261 | 1 | 261 | 7.67e-179 | 492 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289580 | AT3G04840.1 | 85.115 | 262 | 38 | 1 | 1 | 261 | 1 | 262 | 1.75e-163 | 453 |
Msa0289580 | AT4G34670.1 | 85.496 | 262 | 37 | 1 | 1 | 261 | 1 | 262 | 4.54e-163 | 452 |
Find 89 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATCAAACTTGGGAGCTTTA+AGG | 0.168578 | 2_3:-35811572 | None:intergenic |
AATATCATACCAATCCTTCT+TGG | 0.295389 | 2_3:-35809580 | None:intergenic |
ATTTGGTCCTTGTAGGTTCA+TGG | 0.297913 | 2_3:+35812194 | Msa0289580:intron |
CATATTAGTTTGTTCAAATT+CGG | 0.307811 | 2_3:+35812604 | Msa0289580:three_prime_UTR |
GAAGGATTGGTATGATATTA+AGG | 0.312711 | 2_3:+35809584 | Msa0289580:CDS |
GTTTCTCACCCCAAGTCTTT+TGG | 0.335249 | 2_3:+35812506 | Msa0289580:three_prime_UTR |
CTGACTAGATTGTGCATAAC+AGG | 0.339955 | 2_3:-35811156 | None:intergenic |
AAAGCTCCCAAGTTTGATCT+TGG | 0.357514 | 2_3:+35811576 | Msa0289580:CDS |
TAAGAACAAGCGGATCTCTA+AGG | 0.365175 | 2_3:+35809427 | Msa0289580:CDS |
GTTTGATCTTGGAAAATTGA+TGG | 0.369245 | 2_3:+35811587 | Msa0289580:CDS |
GAAATTGTTGGAGCTTGATT+TGG | 0.369823 | 2_3:+35812287 | Msa0289580:exon |
AAATTCATTCCCGAGATGAT+TGG | 0.381702 | 2_3:+35811480 | Msa0289580:CDS |
GGGACGAAGACCATGCATTC+AGG | 0.393353 | 2_3:+35810832 | Msa0289580:CDS |
ATCCTGTGATTTGAAGGAAT+TGG | 0.402781 | 2_3:+35811452 | Msa0289580:CDS |
GACCCTCGTGTCTCGTACTC+AGG | 0.406163 | 2_3:+35809641 | Msa0289580:CDS |
TACCAATCCTTCTTGGCAAA+TGG | 0.412105 | 2_3:-35809573 | None:intergenic |
TAGAGTGTTTGAGGTTTCAT+TGG | 0.413434 | 2_3:+35810797 | Msa0289580:CDS |
GTTTCATTGGCTGATCTTCA+AGG | 0.434675 | 2_3:+35810810 | Msa0289580:CDS |
TGCTGATCCATTTGCCAAGA+AGG | 0.436339 | 2_3:+35809566 | Msa0289580:CDS |
AATTCATTCCCGAGATGATT+GGG | 0.437177 | 2_3:+35811481 | Msa0289580:CDS |
AGCATCATCCTGTGATTTGA+AGG | 0.439297 | 2_3:+35811446 | Msa0289580:CDS |
TACCAAGAGGAGAGCTAACC+AGG | 0.440122 | 2_3:+35811124 | Msa0289580:CDS |
TCCGTCACCATTTCATCAGC+AGG | 0.444686 | 2_3:-35812254 | None:intergenic |
ACTCAAGCATAGAGTGTTTG+AGG | 0.454600 | 2_3:+35810788 | Msa0289580:CDS |
ACCATGCATTCAGGAAGATT+AGG | 0.462005 | 2_3:+35810841 | Msa0289580:CDS |
ATCCATTTGCCAAGAAGGAT+TGG | 0.465718 | 2_3:+35809571 | Msa0289580:CDS |
ATCTCCTTCCCAATCATCTC+GGG | 0.483111 | 2_3:-35811489 | None:intergenic |
GAGGAACCTACTGAAATTGT+TGG | 0.484047 | 2_3:+35812275 | Msa0289580:CDS |
TGTTCAGATCCGTAGGAAGA+TGG | 0.490433 | 2_3:+35811404 | Msa0289580:intron |
CACCTGGTTAGCTCTCCTCT+TGG | 0.502596 | 2_3:-35811126 | None:intergenic |
AACTGACAAACTGAGGTCAT+TGG | 0.506332 | 2_3:+35811016 | Msa0289580:CDS |
TGAGGTCATTGGTGCGTAAG+TGG | 0.507827 | 2_3:+35811027 | Msa0289580:CDS |
CGGATCTCTAAGGGGAAGAA+AGG | 0.516719 | 2_3:+35809437 | Msa0289580:CDS |
AAGAACAAGCGGATCTCTAA+GGG | 0.521243 | 2_3:+35809428 | Msa0289580:CDS |
CTTGTTCTTACCAACGGCCA+TGG | 0.523346 | 2_3:-35809414 | None:intergenic |
ACCTAATCTTCCTGAATGCA+TGG | 0.523822 | 2_3:-35810842 | None:intergenic |
TTTCATTGGCTGATCTTCAA+GGG | 0.523908 | 2_3:+35810811 | Msa0289580:CDS |
GGACGCAAAACCAAAAGACT+TGG | 0.524592 | 2_3:-35812516 | None:intergenic |
TCATCTCGGGAATGAATTTG+CGG | 0.528925 | 2_3:-35811476 | None:intergenic |
GGTATCATAAAACCCTAAAA+CGG | 0.529634 | 2_3:+35809342 | None:intergenic |
AGAGAGGCCTGCTGATGAAA+TGG | 0.532099 | 2_3:+35812247 | Msa0289580:CDS |
TCTTGCCGACATTCTTCACC+TGG | 0.534041 | 2_3:-35809620 | None:intergenic |
AATCTCCTTCCCAATCATCT+CGG | 0.535678 | 2_3:-35811490 | None:intergenic |
TTGAGAGCTGAAGATGTTCA+AGG | 0.537527 | 2_3:+35810864 | Msa0289580:CDS |
GACGCAAAACCAAAAGACTT+GGG | 0.538880 | 2_3:-35812515 | None:intergenic |
CGGATGAACACATTCTGCAA+GGG | 0.539130 | 2_3:-35811537 | None:intergenic |
TCAAATCACAGGATGATGCT+TGG | 0.544201 | 2_3:-35811443 | None:intergenic |
CATAACAGGTCCTCTTCACC+TGG | 0.545447 | 2_3:-35811142 | None:intergenic |
GGAGAGCTAACCAGGTGAAG+AGG | 0.557404 | 2_3:+35811132 | Msa0289580:CDS |
GAATGACAGATTGCTTCAGA+TGG | 0.560187 | 2_3:+35810765 | Msa0289580:intron |
CTCTGAGGATGTTGGCACAA+AGG | 0.562498 | 2_3:+35812223 | Msa0289580:CDS |
CTTTATTTGTTCAGATCCGT+AGG | 0.563835 | 2_3:+35811397 | Msa0289580:intron |
GTTTCACTGTTTGCAGAGTG+CGG | 0.564928 | 2_3:-35809392 | None:intergenic |
GATCCGCTTGTTCTTACCAA+CGG | 0.569816 | 2_3:-35809420 | None:intergenic |
GACCAATTCCTTCAAATCAC+AGG | 0.574407 | 2_3:-35811454 | None:intergenic |
TCGGATGAACACATTCTGCA+AGG | 0.575354 | 2_3:-35811538 | None:intergenic |
ACAATCTAGTCAGATTAGAC+AGG | 0.580594 | 2_3:+35811166 | Msa0289580:CDS |
CAAGCTCCAACAATTTCAGT+AGG | 0.582102 | 2_3:-35812281 | None:intergenic |
GGAGATTACTCTGAGGATGT+TGG | 0.587473 | 2_3:+35812215 | Msa0289580:CDS |
TTCTTCACCTGGAAAACTGA+AGG | 0.588083 | 2_3:-35809609 | None:intergenic |
TGATCTCAACCATCTTCCTA+CGG | 0.590794 | 2_3:-35811413 | None:intergenic |
TTCATTGGCTGATCTTCAAG+GGG | 0.595752 | 2_3:+35810812 | Msa0289580:CDS |
CAGTAGTCTTGACATCCACA+TGG | 0.596992 | 2_3:-35811067 | None:intergenic |
AACAGTGAAACCATGGCCGT+TGG | 0.599680 | 2_3:+35809404 | Msa0289580:exon |
CATTCCCGAGATGATTGGGA+AGG | 0.605231 | 2_3:+35811485 | Msa0289580:CDS |
TGATCTTGGAAAATTGATGG+AGG | 0.612140 | 2_3:+35811590 | Msa0289580:CDS |
TGAGAGCTGAAGATGTTCAA+GGG | 0.612312 | 2_3:+35810865 | Msa0289580:CDS |
ACCCTCGTGTCTCGTACTCA+GGG | 0.615233 | 2_3:+35809642 | Msa0289580:CDS |
CTCTGCAAACAGTGAAACCA+TGG | 0.618251 | 2_3:+35809397 | Msa0289580:exon |
ATCTCTAAGGGGAAGAAAGG+TGG | 0.621403 | 2_3:+35809440 | Msa0289580:CDS |
AACTCTTGTTGAAGCCCATG+TGG | 0.622205 | 2_3:+35811052 | Msa0289580:CDS |
GTCTCGTACTCAGGGTACCA+AGG | 0.623684 | 2_3:+35809650 | Msa0289580:CDS |
TGGCCGTTGGTAAGAACAAG+CGG | 0.624911 | 2_3:+35809417 | Msa0289580:CDS |
CAGAGTTCTCACAGCAACAA+TGG | 0.627817 | 2_3:-35809367 | None:intergenic |
GCCTGCTGATGAAATGGTGA+CGG | 0.629382 | 2_3:+35812253 | Msa0289580:CDS |
GGATGAACACATTCTGCAAG+GGG | 0.631103 | 2_3:-35811536 | None:intergenic |
CAAGGGGTAAATACTAGACG+TGG | 0.633754 | 2_3:-35811520 | None:intergenic |
CTACTGATAATTACACATTG+AGG | 0.636083 | 2_3:+35811084 | Msa0289580:CDS |
TTTGCATTGGCTTTACCAAG+AGG | 0.642280 | 2_3:+35811111 | Msa0289580:CDS |
TACCCTGAGTACGAGACACG+AGG | 0.648373 | 2_3:-35809644 | None:intergenic |
ATGTTGGCACAAAGGTAGAG+AGG | 0.654238 | 2_3:+35812231 | Msa0289580:CDS |
ATTTCACAACTGACAAACTG+AGG | 0.681977 | 2_3:+35811009 | Msa0289580:CDS |
TGCTGATGAAATGGTGACGG+AGG | 0.686062 | 2_3:+35812256 | Msa0289580:CDS |
ACGCAAAACCAAAAGACTTG+GGG | 0.688719 | 2_3:-35812514 | None:intergenic |
ACCCTGAGTACGAGACACGA+GGG | 0.700568 | 2_3:-35809643 | None:intergenic |
AGTAGTCTTGACATCCACAT+GGG | 0.706350 | 2_3:-35811066 | None:intergenic |
AGAACAAGCGGATCTCTAAG+GGG | 0.721950 | 2_3:+35809429 | Msa0289580:CDS |
GCAAAGAACAAATATGCACG+AGG | 0.724902 | 2_3:-35812566 | None:intergenic |
GGTTCATGGAGATTACTCTG+AGG | 0.741731 | 2_3:+35812208 | Msa0289580:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTGATTTTTTTTTTATTTAC+AGG | + | chr2_3:35810980-35810999 | Msa0289580:intron | 10.0% |
!!! | TGATTTTTTTTTTATTTACA+GGG | + | chr2_3:35810981-35811000 | Msa0289580:intron | 10.0% |
!! | GATATTATGAAAATAAATAT+TGG | - | chr2_3:35811659-35811678 | None:intergenic | 10.0% |
!! | GTAAAAAATGAAAATTTGAA+TGG | - | chr2_3:35809503-35809522 | None:intergenic | 15.0% |
!!! | GTTTTTTGTTTTTTGTAATT+TGG | + | chr2_3:35809692-35809711 | Msa0289580:intron | 15.0% |
!!! | TTGGTATAAAAATTGTTTTA+TGG | - | chr2_3:35810231-35810250 | None:intergenic | 15.0% |
!!! | GATTTTTTTTTTATTTACAG+GGG | + | chr2_3:35810982-35811001 | Msa0289580:intron | 15.0% |
!!! | TAAGAGAATATTTCTTTTTT+TGG | - | chr2_3:35811942-35811961 | None:intergenic | 15.0% |
!!! | ATATATATCTGAATTTTGTT+TGG | + | chr2_3:35812381-35812400 | Msa0289580:three_prime_UTR | 15.0% |
!!! | TTTGAATGGATTTTGAAAAA+GGG | - | chr2_3:35809489-35809508 | None:intergenic | 20.0% |
!!! | ATTTGAATGGATTTTGAAAA+AGG | - | chr2_3:35809490-35809509 | None:intergenic | 20.0% |
!! | ATATTCAATGAAAGTAAGAT+AGG | - | chr2_3:35809761-35809780 | None:intergenic | 20.0% |
!!! | TCTTGTCTTTTAAATAATGT+TGG | - | chr2_3:35810433-35810452 | None:intergenic | 20.0% |
!! | CTTAATGCTTATTTAGAAAA+TGG | + | chr2_3:35810735-35810754 | Msa0289580:intron | 20.0% |
!!! | AAAATCTTTTGACAAATTTC+TGG | + | chr2_3:35810889-35810908 | Msa0289580:CDS | 20.0% |
!!! | AAATCTTTTGACAAATTTCT+GGG | + | chr2_3:35810890-35810909 | Msa0289580:CDS | 20.0% |
!! | ATATATAAAGAAGAAATCAC+TGG | + | chr2_3:35811309-35811328 | Msa0289580:intron | 20.0% |
!!! | CAATACATTATTTCTAGTTT+TGG | + | chr2_3:35812018-35812037 | Msa0289580:intron | 20.0% |
!!! | CATATTAGTTTGTTCAAATT+CGG | + | chr2_3:35812604-35812623 | Msa0289580:three_prime_UTR | 20.0% |
!! | TTTCCTTGCATTTTCTATAA+TGG | + | chr2_3:35809526-35809545 | Msa0289580:intron | 25.0% |
! | AAACCATTATAGAAAATGCA+AGG | - | chr2_3:35809532-35809551 | None:intergenic | 25.0% |
! | AAAAACAAAAAACATGACAG+AGG | - | chr2_3:35809685-35809704 | None:intergenic | 25.0% |
! | TCTTACTTTCATTGAATATC+TGG | + | chr2_3:35809762-35809781 | Msa0289580:intron | 25.0% |
! | TTAAGCTATCTAAACAATCA+GGG | - | chr2_3:35809793-35809812 | None:intergenic | 25.0% |
! | ATTAAGCTATCTAAACAATC+AGG | - | chr2_3:35809794-35809813 | None:intergenic | 25.0% |
!! | AAGCTAAAAGTTTTTCCTAT+AGG | + | chr2_3:35809908-35809927 | Msa0289580:intron | 25.0% |
! | TTATTTCCATAATAGCCTAT+AGG | - | chr2_3:35809926-35809945 | None:intergenic | 25.0% |
! | AAGAAAATGTTGTCAAATAG+CGG | - | chr2_3:35810193-35810212 | None:intergenic | 25.0% |
!!! | TGATTGTTGTTTTATAAGTG+TGG | - | chr2_3:35810361-35810380 | None:intergenic | 25.0% |
! | GAGAATAAAAATGAAGACAT+GGG | - | chr2_3:35810536-35810555 | None:intergenic | 25.0% |
!! | AAATATGTCTTAGTCTTTCA+TGG | + | chr2_3:35810677-35810696 | Msa0289580:intron | 25.0% |
!! | AATATGTCTTAGTCTTTCAT+GGG | + | chr2_3:35810678-35810697 | Msa0289580:intron | 25.0% |
! | ATTATGACAAATAGATGGTT+CGG | - | chr2_3:35810928-35810947 | None:intergenic | 25.0% |
! | ACAACATTATGACAAATAGA+TGG | - | chr2_3:35810933-35810952 | None:intergenic | 25.0% |
!! | TTTGTCATAATGTTGTTTGT+TGG | + | chr2_3:35810937-35810956 | Msa0289580:intron | 25.0% |
! | ATATATTAGTGTATCCAACA+CGG | + | chr2_3:35811238-35811257 | Msa0289580:intron | 25.0% |
! | AACAGCATTTCATAAAAGAA+AGG | - | chr2_3:35811289-35811308 | None:intergenic | 25.0% |
!! | AATTTTCCAAGATCAAACTT+GGG | - | chr2_3:35811585-35811604 | None:intergenic | 25.0% |
! | TATCACCTGAATAAAAACTT+TGG | + | chr2_3:35811675-35811694 | Msa0289580:intron | 25.0% |
!! | AACAACCAAAGTTTTTATTC+AGG | - | chr2_3:35811683-35811702 | None:intergenic | 25.0% |
!! | AAAAACTTTGGTTGTTACTT+TGG | + | chr2_3:35811687-35811706 | Msa0289580:intron | 25.0% |
!! | TTTGGAAAGTTTGAAGTAAT+TGG | - | chr2_3:35811756-35811775 | None:intergenic | 25.0% |
! | AATAATCTGAAGGTTGTTTA+TGG | - | chr2_3:35811798-35811817 | None:intergenic | 25.0% |
! | TTGAACTTGTAATAATCTGA+AGG | - | chr2_3:35811808-35811827 | None:intergenic | 25.0% |
!!! | ATCATGTTGCCTTTTAAAAT+TGG | + | chr2_3:35811876-35811895 | Msa0289580:intron | 25.0% |
!!! | TCATGTTGCCTTTTAAAATT+GGG | + | chr2_3:35811877-35811896 | Msa0289580:intron | 25.0% |
!! | TAACACTACCCAATTTTAAA+AGG | - | chr2_3:35811888-35811907 | None:intergenic | 25.0% |
! | ACTTATAACCATCTAAAAAG+TGG | + | chr2_3:35812150-35812169 | Msa0289580:intron | 25.0% |
!!! | GGTTTGATTTTGTTTCTATT+TGG | + | chr2_3:35812177-35812196 | Msa0289580:intron | 25.0% |
!!! | GTATATTTTTCAGCAATGAA+TGG | - | chr2_3:35812540-35812559 | None:intergenic | 25.0% |
!! | AATGGATTTTGAAAAAGGGT+TGG | - | chr2_3:35809485-35809504 | None:intergenic | 30.0% |
AATATCATACCAATCCTTCT+TGG | - | chr2_3:35809583-35809602 | None:intergenic | 30.0% | |
! | GAAGGATTGGTATGATATTA+AGG | + | chr2_3:35809584-35809603 | Msa0289580:CDS | 30.0% |
!! | GGTTTGATTTGTACATTGTT+AGG | + | chr2_3:35809713-35809732 | Msa0289580:intron | 30.0% |
! | GTTTTTCCTATAGGCTATTA+TGG | + | chr2_3:35809917-35809936 | Msa0289580:intron | 30.0% |
TAAGCTGAAAAAACATCTCA+TGG | + | chr2_3:35809943-35809962 | Msa0289580:intron | 30.0% | |
GAACATAAGTAACTAAGTGA+CGG | - | chr2_3:35810004-35810023 | None:intergenic | 30.0% | |
GTTACTTATGTTCGTAGATA+CGG | + | chr2_3:35810011-35810030 | Msa0289580:intron | 30.0% | |
AGAAAATGTTGTCAAATAGC+GGG | - | chr2_3:35810192-35810211 | None:intergenic | 30.0% | |
! | TTATACCAAAAAGCATATCG+TGG | + | chr2_3:35810242-35810261 | Msa0289580:intron | 30.0% |
CGAGAATAAAAATGAAGACA+TGG | - | chr2_3:35810537-35810556 | None:intergenic | 30.0% | |
! | ATATGTCTTAGTCTTTCATG+GGG | + | chr2_3:35810679-35810698 | Msa0289580:intron | 30.0% |
GTTGCTGAAATTTGATCAAT+TGG | + | chr2_3:35810701-35810720 | Msa0289580:intron | 30.0% | |
CTACTGATAATTACACATTG+AGG | + | chr2_3:35811084-35811103 | Msa0289580:CDS | 30.0% | |
!! | CTTTAAGGATCTTCACTTTT+CGG | - | chr2_3:35811560-35811579 | None:intergenic | 30.0% |
! | CAATTTTCCAAGATCAAACT+TGG | - | chr2_3:35811586-35811605 | None:intergenic | 30.0% |
GTTTGATCTTGGAAAATTGA+TGG | + | chr2_3:35811587-35811606 | Msa0289580:CDS | 30.0% | |
! | GTTTTCACACAAGCATTTAT+TGG | - | chr2_3:35811849-35811868 | None:intergenic | 30.0% |
AAATCAGATATGCATGCTAT+TGG | + | chr2_3:35812412-35812431 | Msa0289580:intron | 30.0% | |
AATCAGATATGCATGCTATT+GGG | + | chr2_3:35812413-35812432 | Msa0289580:intron | 30.0% | |
! | TTGTTCCACGATATGCTTTT+TGG | - | chr2_3:35810250-35810269 | None:intergenic | 35.0% |
GTAGATCACATATCGCTATA+GGG | - | chr2_3:35810297-35810316 | None:intergenic | 35.0% | |
AGATAGATATTTCGAGCAGA+GGG | - | chr2_3:35810319-35810338 | None:intergenic | 35.0% | |
TAGATAGATATTTCGAGCAG+AGG | - | chr2_3:35810320-35810339 | None:intergenic | 35.0% | |
TCGAAATATCTATCTAGCAC+TGG | + | chr2_3:35810324-35810343 | Msa0289580:intron | 35.0% | |
CGAAATATCTATCTAGCACT+GGG | + | chr2_3:35810325-35810344 | Msa0289580:intron | 35.0% | |
!! | AATAATGTTGGTCTTGCTTG+TGG | - | chr2_3:35810421-35810440 | None:intergenic | 35.0% |
GACAAGAAAAAAGACTGAAC+TGG | + | chr2_3:35810446-35810465 | Msa0289580:intron | 35.0% | |
TGAACTGGCATTATCATGAT+GGG | + | chr2_3:35810461-35810480 | Msa0289580:intron | 35.0% | |
!!! | TTTTCTAAAGTATCGAGTCC+AGG | + | chr2_3:35810498-35810517 | Msa0289580:intron | 35.0% |
!! | TTTCTAAAGTATCGAGTCCA+GGG | + | chr2_3:35810499-35810518 | Msa0289580:intron | 35.0% |
ATTCTCATGTAAGTGGAAAG+AGG | - | chr2_3:35810576-35810595 | None:intergenic | 35.0% | |
TCTTTCCACTTACATGAGAA+TGG | + | chr2_3:35810575-35810594 | Msa0289580:intron | 35.0% | |
AACTTCCATTCTCATGTAAG+TGG | - | chr2_3:35810583-35810602 | None:intergenic | 35.0% | |
!!! | GCTATTTAACCCATTGGTTT+TGG | + | chr2_3:35810640-35810659 | Msa0289580:intron | 35.0% |
TCCTTGTAACCAAAACCAAT+GGG | - | chr2_3:35810652-35810671 | None:intergenic | 35.0% | |
TTCCTTGTAACCAAAACCAA+TGG | - | chr2_3:35810653-35810672 | None:intergenic | 35.0% | |
! | TAGAGTGTTTGAGGTTTCAT+TGG | + | chr2_3:35810797-35810816 | Msa0289580:CDS | 35.0% |
! | TTTCATTGGCTGATCTTCAA+GGG | + | chr2_3:35810811-35810830 | Msa0289580:CDS | 35.0% |
ATTTCACAACTGACAAACTG+AGG | + | chr2_3:35811009-35811028 | Msa0289580:CDS | 35.0% | |
! | ACATTGAGGATGTTTTGCAT+TGG | + | chr2_3:35811098-35811117 | Msa0289580:CDS | 35.0% |
ACAATCTAGTCAGATTAGAC+AGG | + | chr2_3:35811166-35811185 | Msa0289580:CDS | 35.0% | |
!! | ATCCAACACATGTTTTAGGT+AGG | + | chr2_3:35811262-35811281 | Msa0289580:intron | 35.0% |
!!! | AAATCACTGGTTTTGAACCT+AGG | + | chr2_3:35811322-35811341 | Msa0289580:intron | 35.0% |
CTACGGATCTGAACAAATAA+AGG | - | chr2_3:35811399-35811418 | None:intergenic | 35.0% | |
! | CTTTATTTGTTCAGATCCGT+AGG | + | chr2_3:35811397-35811416 | Msa0289580:intron | 35.0% |
ATCCTGTGATTTGAAGGAAT+TGG | + | chr2_3:35811452-35811471 | Msa0289580:CDS | 35.0% | |
AAATTCATTCCCGAGATGAT+TGG | + | chr2_3:35811480-35811499 | Msa0289580:CDS | 35.0% | |
AATTCATTCCCGAGATGATT+GGG | + | chr2_3:35811481-35811500 | Msa0289580:CDS | 35.0% | |
TGATCTTGGAAAATTGATGG+AGG | + | chr2_3:35811590-35811609 | Msa0289580:CDS | 35.0% | |
CTTTCCAAAAGCTCTCTATT+CGG | + | chr2_3:35811767-35811786 | Msa0289580:intron | 35.0% | |
!! | TAGTGTTAACTTGTGCCTTT+AGG | + | chr2_3:35811900-35811919 | Msa0289580:intron | 35.0% |
!! | AGTGTTAACTTGTGCCTTTA+GGG | + | chr2_3:35811901-35811920 | Msa0289580:intron | 35.0% |
TTTCTTAACATGTGCCCTAA+AGG | - | chr2_3:35811918-35811937 | None:intergenic | 35.0% | |
CTTCTAAACTTGTGCCTTAA+GGG | + | chr2_3:35812041-35812060 | Msa0289580:intron | 35.0% | |
!! | AATGTTAACTTGTGCCCTTA+AGG | - | chr2_3:35812058-35812077 | None:intergenic | 35.0% |
TCATGCTAAAAGAGAACAGA+AGG | - | chr2_3:35812107-35812126 | None:intergenic | 35.0% | |
AACCATCTAAAAAGTGGCTT+TGG | + | chr2_3:35812156-35812175 | Msa0289580:intron | 35.0% | |
!!! | AACCAAAGCCACTTTTTAGA+TGG | - | chr2_3:35812161-35812180 | None:intergenic | 35.0% |
! | TGTTTCTATTTGGTCCTTGT+AGG | + | chr2_3:35812187-35812206 | Msa0289580:intron | 35.0% |
GAAATTGTTGGAGCTTGATT+TGG | + | chr2_3:35812287-35812306 | Msa0289580:exon | 35.0% | |
ATCAGATATGCATGCTATTG+GGG | + | chr2_3:35812414-35812433 | Msa0289580:intron | 35.0% | |
TAAGAACAAGCGGATCTCTA+AGG | + | chr2_3:35809427-35809446 | Msa0289580:CDS | 40.0% | |
AAGAACAAGCGGATCTCTAA+GGG | + | chr2_3:35809428-35809447 | Msa0289580:CDS | 40.0% | |
ATCCATTTGCCAAGAAGGAT+TGG | + | chr2_3:35809571-35809590 | Msa0289580:CDS | 40.0% | |
TACCAATCCTTCTTGGCAAA+TGG | - | chr2_3:35809576-35809595 | None:intergenic | 40.0% | |
TTCTTCACCTGGAAAACTGA+AGG | - | chr2_3:35809612-35809631 | None:intergenic | 40.0% | |
! | GTTTTCCAGGTGAAGAATGT+CGG | + | chr2_3:35809615-35809634 | Msa0289580:CDS | 40.0% |
GACAGAGGAAAACAATACCT+TGG | - | chr2_3:35809670-35809689 | None:intergenic | 40.0% | |
GCTATCTAAACAATCAGGGA+GGG | - | chr2_3:35809789-35809808 | None:intergenic | 40.0% | |
AGCTATCTAAACAATCAGGG+AGG | - | chr2_3:35809790-35809809 | None:intergenic | 40.0% | |
CACTAAGTATACTCAGTCCA+AGG | - | chr2_3:35810061-35810080 | None:intergenic | 40.0% | |
TCTTGTAGTGCAGAAAACAG+TGG | + | chr2_3:35810122-35810141 | Msa0289580:intron | 40.0% | |
CTTGTAGTGCAGAAAACAGT+GGG | + | chr2_3:35810123-35810142 | Msa0289580:intron | 40.0% | |
!! | TTGTCAAATAGCGGGTAAAG+TGG | - | chr2_3:35810184-35810203 | None:intergenic | 40.0% |
GGTAGATCACATATCGCTAT+AGG | - | chr2_3:35810298-35810317 | None:intergenic | 40.0% | |
CTGAACTGGCATTATCATGA+TGG | + | chr2_3:35810460-35810479 | Msa0289580:intron | 40.0% | |
!! | TTCTAAAGTATCGAGTCCAG+GGG | + | chr2_3:35810500-35810519 | Msa0289580:intron | 40.0% |
!! | CAATGGGTTAAATAGCAGCT+AGG | - | chr2_3:35810636-35810655 | None:intergenic | 40.0% |
! | CTAGCTGCTATTTAACCCAT+TGG | + | chr2_3:35810634-35810653 | Msa0289580:intron | 40.0% |
!!! | ACCCATTGGTTTTGGTTACA+AGG | + | chr2_3:35810648-35810667 | Msa0289580:intron | 40.0% |
GAATGACAGATTGCTTCAGA+TGG | + | chr2_3:35810765-35810784 | Msa0289580:intron | 40.0% | |
! | ACTCAAGCATAGAGTGTTTG+AGG | + | chr2_3:35810788-35810807 | Msa0289580:CDS | 40.0% |
! | GTTTCATTGGCTGATCTTCA+AGG | + | chr2_3:35810810-35810829 | Msa0289580:CDS | 40.0% |
! | TTCATTGGCTGATCTTCAAG+GGG | + | chr2_3:35810812-35810831 | Msa0289580:CDS | 40.0% |
ACCATGCATTCAGGAAGATT+AGG | + | chr2_3:35810841-35810860 | Msa0289580:CDS | 40.0% | |
ACCTAATCTTCCTGAATGCA+TGG | - | chr2_3:35810845-35810864 | None:intergenic | 40.0% | |
TTGAGAGCTGAAGATGTTCA+AGG | + | chr2_3:35810864-35810883 | Msa0289580:CDS | 40.0% | |
TGAGAGCTGAAGATGTTCAA+GGG | + | chr2_3:35810865-35810884 | Msa0289580:CDS | 40.0% | |
AACTGACAAACTGAGGTCAT+TGG | + | chr2_3:35811016-35811035 | Msa0289580:CDS | 40.0% | |
! | AGTAGTCTTGACATCCACAT+GGG | - | chr2_3:35811069-35811088 | None:intergenic | 40.0% |
!! | TTTGCATTGGCTTTACCAAG+AGG | + | chr2_3:35811111-35811130 | Msa0289580:CDS | 40.0% |
CTGACTAGATTGTGCATAAC+AGG | - | chr2_3:35811159-35811178 | None:intergenic | 40.0% | |
! | CGGTATCCAACACATGTTTT+AGG | + | chr2_3:35811258-35811277 | Msa0289580:intron | 40.0% |
GTCCTACCTAAAACATGTGT+TGG | - | chr2_3:35811267-35811286 | None:intergenic | 40.0% | |
AGAAGACAAAGCATGATCCT+AGG | - | chr2_3:35811342-35811361 | None:intergenic | 40.0% | |
TGATCTCAACCATCTTCCTA+CGG | - | chr2_3:35811416-35811435 | None:intergenic | 40.0% | |
TCAAATCACAGGATGATGCT+TGG | - | chr2_3:35811446-35811465 | None:intergenic | 40.0% | |
AGCATCATCCTGTGATTTGA+AGG | + | chr2_3:35811446-35811465 | Msa0289580:CDS | 40.0% | |
GACCAATTCCTTCAAATCAC+AGG | - | chr2_3:35811457-35811476 | None:intergenic | 40.0% | |
TCATCTCGGGAATGAATTTG+CGG | - | chr2_3:35811479-35811498 | None:intergenic | 40.0% | |
AATCTCCTTCCCAATCATCT+CGG | - | chr2_3:35811493-35811512 | None:intergenic | 40.0% | |
GATCAAACTTGGGAGCTTTA+AGG | - | chr2_3:35811575-35811594 | None:intergenic | 40.0% | |
AAAGCTCCCAAGTTTGATCT+TGG | + | chr2_3:35811576-35811595 | Msa0289580:CDS | 40.0% | |
!! | TTGGTTGTTACTTTGGTCAC+TGG | + | chr2_3:35811694-35811713 | Msa0289580:intron | 40.0% |
! | GAAACCGAATAGAGAGCTTT+TGG | - | chr2_3:35811774-35811793 | None:intergenic | 40.0% |
GCTTCTAAACTTGTGCCTTA+AGG | + | chr2_3:35812040-35812059 | Msa0289580:intron | 40.0% | |
ATTTGGTCCTTGTAGGTTCA+TGG | + | chr2_3:35812194-35812213 | Msa0289580:intron | 40.0% | |
GTAATCTCCATGAACCTACA+AGG | - | chr2_3:35812204-35812223 | None:intergenic | 40.0% | |
GAGGAACCTACTGAAATTGT+TGG | + | chr2_3:35812275-35812294 | Msa0289580:CDS | 40.0% | |
CAAGCTCCAACAATTTCAGT+AGG | - | chr2_3:35812284-35812303 | None:intergenic | 40.0% | |
GAGCTGGGTGATTAAACATT+TGG | + | chr2_3:35812436-35812455 | Msa0289580:intron | 40.0% | |
! | GGGTGATTAAACATTTGGTG+TGG | + | chr2_3:35812441-35812460 | Msa0289580:intron | 40.0% |
ACGCAAAACCAAAAGACTTG+GGG | - | chr2_3:35812517-35812536 | None:intergenic | 40.0% | |
GACGCAAAACCAAAAGACTT+GGG | - | chr2_3:35812518-35812537 | None:intergenic | 40.0% | |
GCAAAGAACAAATATGCACG+AGG | - | chr2_3:35812569-35812588 | None:intergenic | 40.0% | |
! | GCAACAATGGCACCGTTTTA+GGG | - | chr2_3:35809357-35809376 | None:intergenic | 45.0% |
! | AGCAACAATGGCACCGTTTT+AGG | - | chr2_3:35809358-35809377 | None:intergenic | 45.0% |
CAGAGTTCTCACAGCAACAA+TGG | - | chr2_3:35809370-35809389 | None:intergenic | 45.0% | |
GTTTCACTGTTTGCAGAGTG+CGG | - | chr2_3:35809395-35809414 | None:intergenic | 45.0% | |
CTCTGCAAACAGTGAAACCA+TGG | + | chr2_3:35809397-35809416 | Msa0289580:exon | 45.0% | |
GATCCGCTTGTTCTTACCAA+CGG | - | chr2_3:35809423-35809442 | None:intergenic | 45.0% | |
AGAACAAGCGGATCTCTAAG+GGG | + | chr2_3:35809429-35809448 | Msa0289580:CDS | 45.0% | |
! | ATCTCTAAGGGGAAGAAAGG+TGG | + | chr2_3:35809440-35809459 | Msa0289580:CDS | 45.0% |
TGCTGATCCATTTGCCAAGA+AGG | + | chr2_3:35809566-35809585 | Msa0289580:CDS | 45.0% | |
! | TAAGGCTCCTTCAGTTTTCC+AGG | + | chr2_3:35809602-35809621 | Msa0289580:CDS | 45.0% |
TGCCAATCCAAACATGTCCT+TGG | + | chr2_3:35810041-35810060 | Msa0289580:intron | 45.0% | |
GTCCAAGGACATGTTTGGAT+TGG | - | chr2_3:35810046-35810065 | None:intergenic | 45.0% | |
ACTCAGTCCAAGGACATGTT+TGG | - | chr2_3:35810051-35810070 | None:intergenic | 45.0% | |
AACTCTTGTTGAAGCCCATG+TGG | + | chr2_3:35811052-35811071 | Msa0289580:CDS | 45.0% | |
! | CAGTAGTCTTGACATCCACA+TGG | - | chr2_3:35811070-35811089 | None:intergenic | 45.0% |
ACATGTGTTGGATACCGTGT+TGG | - | chr2_3:35811255-35811274 | None:intergenic | 45.0% | |
TGTTCAGATCCGTAGGAAGA+TGG | + | chr2_3:35811404-35811423 | Msa0289580:intron | 45.0% | |
ATCTCCTTCCCAATCATCTC+GGG | - | chr2_3:35811492-35811511 | None:intergenic | 45.0% | |
CAAGGGGTAAATACTAGACG+TGG | - | chr2_3:35811523-35811542 | None:intergenic | 45.0% | |
GGATGAACACATTCTGCAAG+GGG | - | chr2_3:35811539-35811558 | None:intergenic | 45.0% | |
CGGATGAACACATTCTGCAA+GGG | - | chr2_3:35811540-35811559 | None:intergenic | 45.0% | |
TCGGATGAACACATTCTGCA+AGG | - | chr2_3:35811541-35811560 | None:intergenic | 45.0% | |
GGTTCATGGAGATTACTCTG+AGG | + | chr2_3:35812208-35812227 | Msa0289580:intron | 45.0% | |
! | GGAGATTACTCTGAGGATGT+TGG | + | chr2_3:35812215-35812234 | Msa0289580:CDS | 45.0% |
ATGTTGGCACAAAGGTAGAG+AGG | + | chr2_3:35812231-35812250 | Msa0289580:CDS | 45.0% | |
! | GTTTCTCACCCCAAGTCTTT+TGG | + | chr2_3:35812506-35812525 | Msa0289580:three_prime_UTR | 45.0% |
GGACGCAAAACCAAAAGACT+TGG | - | chr2_3:35812519-35812538 | None:intergenic | 45.0% | |
!! | ATATTATGAAAATAAATATT+GGG | - | chr2_3:35811658-35811677 | None:intergenic | 5.0% |
!!! | AACAAAATTAAAATTTTAAA+GGG | - | chr2_3:35812082-35812101 | None:intergenic | 5.0% |
!!! | AAACAAAATTAAAATTTTAA+AGG | - | chr2_3:35812083-35812102 | None:intergenic | 5.0% |
AACAGTGAAACCATGGCCGT+TGG | + | chr2_3:35809404-35809423 | Msa0289580:exon | 50.0% | |
CTTGTTCTTACCAACGGCCA+TGG | - | chr2_3:35809417-35809436 | None:intergenic | 50.0% | |
! | TGGCCGTTGGTAAGAACAAG+CGG | + | chr2_3:35809417-35809436 | Msa0289580:CDS | 50.0% |
! | CGGATCTCTAAGGGGAAGAA+AGG | + | chr2_3:35809437-35809456 | Msa0289580:CDS | 50.0% |
TCTTGCCGACATTCTTCACC+TGG | - | chr2_3:35809623-35809642 | None:intergenic | 50.0% | |
!! | TGTTGGTCTTGCTTGTGGCA+GGG | - | chr2_3:35810416-35810435 | None:intergenic | 50.0% |
!! | ATGTTGGTCTTGCTTGTGGC+AGG | - | chr2_3:35810417-35810436 | None:intergenic | 50.0% |
TGAGGTCATTGGTGCGTAAG+TGG | + | chr2_3:35811027-35811046 | Msa0289580:CDS | 50.0% | |
TACCAAGAGGAGAGCTAACC+AGG | + | chr2_3:35811124-35811143 | Msa0289580:CDS | 50.0% | |
CATAACAGGTCCTCTTCACC+TGG | - | chr2_3:35811145-35811164 | None:intergenic | 50.0% | |
CATTCCCGAGATGATTGGGA+AGG | + | chr2_3:35811485-35811504 | Msa0289580:CDS | 50.0% | |
! | CTCTGAGGATGTTGGCACAA+AGG | + | chr2_3:35812223-35812242 | Msa0289580:CDS | 50.0% |
AGAGAGGCCTGCTGATGAAA+TGG | + | chr2_3:35812247-35812266 | Msa0289580:CDS | 50.0% | |
GCCTGCTGATGAAATGGTGA+CGG | + | chr2_3:35812253-35812272 | Msa0289580:CDS | 50.0% | |
TCCGTCACCATTTCATCAGC+AGG | - | chr2_3:35812257-35812276 | None:intergenic | 50.0% | |
!! | TGCTGATGAAATGGTGACGG+AGG | + | chr2_3:35812256-35812275 | Msa0289580:CDS | 50.0% |
TATGCATGCTATTGGGGAGC+TGG | + | chr2_3:35812420-35812439 | Msa0289580:intron | 50.0% | |
ATGCATGCTATTGGGGAGCT+GGG | + | chr2_3:35812421-35812440 | Msa0289580:intron | 50.0% | |
ACCCTCGTGTCTCGTACTCA+GGG | + | chr2_3:35809642-35809661 | Msa0289580:CDS | 55.0% | |
ACCCTGAGTACGAGACACGA+GGG | - | chr2_3:35809646-35809665 | None:intergenic | 55.0% | |
TACCCTGAGTACGAGACACG+AGG | - | chr2_3:35809647-35809666 | None:intergenic | 55.0% | |
! | GTCTCGTACTCAGGGTACCA+AGG | + | chr2_3:35809650-35809669 | Msa0289580:CDS | 55.0% |
CATGGGAATGTCATGTCCCC+TGG | - | chr2_3:35810519-35810538 | None:intergenic | 55.0% | |
GGGACGAAGACCATGCATTC+AGG | + | chr2_3:35810832-35810851 | Msa0289580:CDS | 55.0% | |
! | CACCTGGTTAGCTCTCCTCT+TGG | - | chr2_3:35811129-35811148 | None:intergenic | 55.0% |
GGAGAGCTAACCAGGTGAAG+AGG | + | chr2_3:35811132-35811151 | Msa0289580:CDS | 55.0% | |
GACCCTCGTGTCTCGTACTC+AGG | + | chr2_3:35809641-35809660 | Msa0289580:CDS | 60.0% | |
CTTGTGGCAGGGCAGAAGTG+GGG | - | chr2_3:35810405-35810424 | None:intergenic | 60.0% | |
GCTTGTGGCAGGGCAGAAGT+GGG | - | chr2_3:35810406-35810425 | None:intergenic | 60.0% | |
TGCTTGTGGCAGGGCAGAAG+TGG | - | chr2_3:35810407-35810426 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 35809349 | 35812631 | 35809349 | ID=Msa0289580;Name=Msa0289580 |
chr2_3 | mRNA | 35809349 | 35812631 | 35809349 | ID=Msa0289580-mRNA-1;Parent=Msa0289580;Name=Msa0289580-mRNA-1;_AED=0.10;_eAED=0.10;_QI=67|1|1|1|0.83|0.71|7|294|261 |
chr2_3 | exon | 35809349 | 35809474 | 35809349 | ID=Msa0289580-mRNA-1:exon:11711;Parent=Msa0289580-mRNA-1 |
chr2_3 | exon | 35809566 | 35809671 | 35809566 | ID=Msa0289580-mRNA-1:exon:11712;Parent=Msa0289580-mRNA-1 |
chr2_3 | exon | 35810774 | 35810911 | 35810774 | ID=Msa0289580-mRNA-1:exon:11713;Parent=Msa0289580-mRNA-1 |
chr2_3 | exon | 35811002 | 35811187 | 35811002 | ID=Msa0289580-mRNA-1:exon:11714;Parent=Msa0289580-mRNA-1 |
chr2_3 | exon | 35811411 | 35811611 | 35811411 | ID=Msa0289580-mRNA-1:exon:11715;Parent=Msa0289580-mRNA-1 |
chr2_3 | exon | 35812209 | 35812427 | 35812209 | ID=Msa0289580-mRNA-1:exon:11716;Parent=Msa0289580-mRNA-1 |
chr2_3 | exon | 35812461 | 35812631 | 35812461 | ID=Msa0289580-mRNA-1:exon:11717;Parent=Msa0289580-mRNA-1 |
chr2_3 | five_prime_UTR | 35809349 | 35809415 | 35809349 | ID=Msa0289580-mRNA-1:five_prime_utr;Parent=Msa0289580-mRNA-1 |
chr2_3 | CDS | 35809416 | 35809474 | 35809416 | ID=Msa0289580-mRNA-1:cds;Parent=Msa0289580-mRNA-1 |
chr2_3 | CDS | 35809566 | 35809671 | 35809566 | ID=Msa0289580-mRNA-1:cds;Parent=Msa0289580-mRNA-1 |
chr2_3 | CDS | 35810774 | 35810911 | 35810774 | ID=Msa0289580-mRNA-1:cds;Parent=Msa0289580-mRNA-1 |
chr2_3 | CDS | 35811002 | 35811187 | 35811002 | ID=Msa0289580-mRNA-1:cds;Parent=Msa0289580-mRNA-1 |
chr2_3 | CDS | 35811411 | 35811611 | 35811411 | ID=Msa0289580-mRNA-1:cds;Parent=Msa0289580-mRNA-1 |
chr2_3 | CDS | 35812209 | 35812304 | 35812209 | ID=Msa0289580-mRNA-1:cds;Parent=Msa0289580-mRNA-1 |
chr2_3 | three_prime_UTR | 35812305 | 35812427 | 35812305 | ID=Msa0289580-mRNA-1:three_prime_utr;Parent=Msa0289580-mRNA-1 |
chr2_3 | three_prime_UTR | 35812461 | 35812631 | 35812461 | ID=Msa0289580-mRNA-1:three_prime_utr;Parent=Msa0289580-mRNA-1 |
Gene Sequence |
Protein sequence |